AT4G28540
ERF Family

belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0006989
Physical Location & Seq
Forward (+)
14106735 .. 14110706
3972 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G28540.1

Sequence Viewer

Length: 1440 bp
ATGGACTTGAAAATGGATAATGTTATTGGGGGAAAGTTTAAACTTGGTCGGAAGATCGGTGGTGGCTCTTTTGGAGAACTTTTTCTTGCCGTAAGTTTGCAAACCGGAGAGGAAGCAGCTGTTAAGCTGGAGCCTGCGAAAACTAAGCATCCCCAACTTCATTATGAGTCGAAGATATACATGCTTCTACAAGGAGGAAGTGGCATCCCCAGCCTTAAGTGGTTTGGGGTTCAGGGAGACTACAATGCGATGGTCATTGATCTGCTTGGGCCGAGTTTGGAAGACTTGTTCAACTACTGCAATAGGAGGCTTACTTTGAAGGCAGTTTTGATGCTTGCAGATCAACTGATTAGCAGAGTTGAATATATGCATTCAAGGGGGTTTCTTCACCGTGACATCAAACCTGACAATTTCTTGATGGGACTTGGTCGCAAAGCAAACCAGGTGTATATCATTGATTTTGGGCTTGCAAAGAAGTATAGGGATCTCCAAACACATAGGCATATCCCCTATAGAGAAAACAAGAACCTTACGGGCACAGCTCGGTATGCTAGTGTCAACACTCACCTAGGAGTTGAGCAAAGTAGGAGGGATGATCTGGAGTCTCTTGGTTACGTACTCATGTATTTCCTGAGAGGAAGCTTACCGTGGCAGGGACTAAAAGCTGGCACAAAGAAGCAAAAGTATGACAGAATTAGCGAGAAGAAAGTATCAACTCCTATAGAGGTCTTGTGCAAGTCATATCCACCCGAATTCGTATCATACTTTCAATACTGCAGATCTCTGCGATTCGAAGACAAACCAGACTACTCATATCTAAAGAGACTTTTCCGAGACTTGTTTATCCGTGAAGGTTATCAGTTTGATTATGTATTCGACTGGACTGCATTGAAACACCCTCAGAGTAGTGCCAGGTCCCATTCCAGTACACATGAAAGGCATCGTACCGGTAAACCAGGGATGGGTGCGGGACCGTCTGCTGAAAAACCTGAAAGGATTTCAGTAGGGAACATCCGCGATAAATTCTCAGGTGCGGTCGAAGCATTTGCGAGAAGGAACGTTAGAGGACCCAGTCCCCATCAAAACCATACCAGACATCGAACTCTTGACGAAATTCCTTCAATGAAACCTGCTGTGAATATGGTATCTGAGAAAGGAAGAAACACTTCCAGATACGGCAGTGCTTCGAGGAGAGCAGTAGCCTCAGGAAGTAGACCAAGCTCATCAGGTGAACAAAGGGAGAGCCGGGACTCGAGCCGCGTAGCCTCAAGCGGTGGCGGTGTCCGACCATCAGTCTTCCAAAGAACCCAAGCAGCAGCTGCTGTGAGTGGATACGAGTCAAAGACAGCATCTGCCTTTAACCGCGACCGAGTAGCCGCTTCAAGAACAGCACGAGACGAGGCTCTCAGAAGCTTCGAGCTTCTTTCGATCCGCAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000226 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005856 GO:0005874 GO:0005881 GO:0005911 GO:0005938 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006897 GO:0006996 GO:0007010 GO:0007017 GO:0007154 GO:0007165 GO:0008092 GO:0008150 GO:0008152 GO:0008360 GO:0009506 GO:0009987 GO:0012505 GO:0015630 GO:0015631 GO:0016043 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022603 GO:0022604 GO:0023052 GO:0030054 GO:0030863 GO:0030865 GO:0030981 GO:0031122 GO:0036211 GO:0040008 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043622 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0046777 GO:0048638 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051179 GO:0051234 GO:0051510 GO:0051716 GO:0055028 GO:0055044 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0071944 GO:0097435 GO:0098657 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0099568 GO:0140096 GO:1901564
KEGG Pathways
Metabolic & Signaling
ko04068 ko04310 ko04340 ko04341 ko04390 ko04391 ko04392 ko04540 ko04710 ko04711 map04068 map04310 map04340 map04341 map04390 map04391 map04392 map04540 map04710 map04711
Pfam Domains
Protein Families
Pkinase

Protein Analysis

479

Amino Acids

54.02

Weight (kDa)

9.95

Isoelectric Point (pI)

44.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 14 - 231 1.4e-24 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 14 - 274 3e-13 Protein tyrosine and serine/threonine kinase
Pkinase_fungal PF17667 117 - 210 5e-09 Fungal protein kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1138
AccI GTMKAC 1 cut(s) 1213
AccII CGCG 3 cut(s) 1017, 1260, 1365
AciI CCGC 9 cut(s) 968, 1015, 1034, 1258, 1272, 1278, 1363, 1377, 1432
AclI AACGTT 1 cut(s) 1059
AclWI GGATC 2 cut(s) 492, 1423
AcsI RAATTY 3 cut(s) 752, 1022, 1113
AfaI GTAC 3 cut(s) 618, 928, 946
AfiI CCNNNNNNNGG 2 cut(s) 653, 962
AflII CTTAAG 1 cut(s) 215
AgeI ACCGGT 1 cut(s) 947
AgsI TTSAA 9 cut(s) 10, 292, 319, 362, 375, 770, 892, 1122, 1383
AhdI GACNNNNNGTC 1 cut(s) 1292
AjnI CCWGG 3 cut(s) 441, 911, 955
AloI GAACNNNNNNTCC 2 cut(s) 272, 304
AluBI AGCT 9 cut(s) 119, 127, 542, 642, 665, 1221, 1319, 1413, 1420
AluI AGCT 9 cut(s) 119, 127, 542, 642, 665, 1221, 1319, 1413, 1420
Alw26I GTCTC 5 cut(s) 231, 609, 817, 828, 1389
AlwI GGATC 2 cut(s) 492, 1423
AlwNI CAGNNNCTG 3 cut(s) 1319, 1322, 1352
Ama87I CYCGRG 1 cut(s) 1252
AoxI GGCC 1 cut(s) 269
ApeKI GCWGC 4 cut(s) 116, 1313, 1316, 1319
ApoI RAATTY 3 cut(s) 752, 1022, 1113
AsiGI ACCGGT 1 cut(s) 947
Asp700I GAANNNNTTC 2 cut(s) 81, 1165
AspA2I CCTAGG 1 cut(s) 568
AspS9I GGNCC 4 cut(s) 269, 915, 971, 1067
AsuC2I CCSGG 1 cut(s) 1247
AsuHPI GGTGA 3 cut(s) 380, 557, 1241
AsuII TTCGAA 1 cut(s) 792
AvaI CYCGRG 1 cut(s) 1252
AvaII GGWCC 3 cut(s) 915, 971, 1067
AvrII CCTAGG 1 cut(s) 568
AxyI CCTNAGG 1 cut(s) 1204
BaeGI GKGCMC 1 cut(s) 539
BaeI ACNNNNGTAYC 2 cut(s) 1165, 1198
BauI CACGAG 1 cut(s) 1392
BbsI GAAGAC 3 cut(s) 288, 801, 1288
BbvI GCAGC 4 cut(s) 128, 1306, 1325, 1328
BccI CCATC 5 cut(s) 244, 412, 955, 1086, 1297
BceAI ACGGC 2 cut(s) 74, 1192
BcgI CGANNNNNNTGC 4 cut(s) 866, 900, 1028, 1062
BciT130I CCWGG 3 cut(s) 443, 913, 957
BciVI GTATCC 1 cut(s) 1325
BcnI CCSGG 1 cut(s) 1247
BcoDI GTCTC 5 cut(s) 231, 609, 817, 828, 1389
BfaI CTAG 2 cut(s) 552, 569
BfmI CTRYAG 3 cut(s) 511, 720, 775
BfrI CTTAAG 1 cut(s) 215
BfuAI ACCTGC 1 cut(s) 1138
BfuI GTATCC 1 cut(s) 1325
BglII AGATCT 1 cut(s) 779
BisI GCNGC 6 cut(s) 117, 1258, 1314, 1317, 1320, 1377
BlnI CCTAGG 1 cut(s) 568
BlsI GCNGC 6 cut(s) 118, 1259, 1315, 1318, 1321, 1378
Bme1390I CCNGG 4 cut(s) 443, 913, 957, 1247
Bme18I GGWCC 3 cut(s) 915, 971, 1067
BmeRI GACNNNNNGTC 1 cut(s) 1292
BmeT110I CYCGRG 1 cut(s) 1252
BmgT120I GGNCC 4 cut(s) 269, 915, 971, 1067
BmiI GGNNCC 4 cut(s) 132, 917, 972, 1069
BmrFI CCNGG 4 cut(s) 443, 913, 957, 1247
BmrI ACTGGG 1 cut(s) 1065
BmsI GCATC 5 cut(s) 157, 213, 321, 949, 1358
BmuI ACTGGG 1 cut(s) 1065
BpiI GAAGAC 3 cut(s) 288, 801, 1288
BpmI CTGGAG 2 cut(s) 149, 620
Bpu14I TTCGAA 1 cut(s) 792
BpuEI CTTGAG 1 cut(s) 1252
BpuMI CCSGG 1 cut(s) 1247
BsaAI YACGTR 1 cut(s) 616
BsaJI CCNNGG 3 cut(s) 568, 647, 956
BsaWI WCCGGW 2 cut(s) 104, 947
Bsc4I CCNNNNNNNGG 2 cut(s) 653, 962
Bse118I RCCGGY 1 cut(s) 947
Bse1I ACTGG 3 cut(s) 884, 924, 1071
Bse21I CCTNAGG 1 cut(s) 1204
BseBI CCWGG 3 cut(s) 443, 913, 957
BseDI CCNNGG 3 cut(s) 568, 647, 956
BseGI GGATG 5 cut(s) 148, 204, 598, 966, 1011
BseLI CCNNNNNNNGG 2 cut(s) 653, 962
BseMII CTCAG 6 cut(s) 623, 914, 1041, 1140, 1218, 1420
BseNI ACTGG 3 cut(s) 884, 924, 1071
BseRI GAGGAG 1 cut(s) 1204
BseSI GKGCMC 1 cut(s) 539
BseXI GCAGC 4 cut(s) 128, 1306, 1325, 1328
BseYI CCCAGC 1 cut(s) 209
Bsh1236I CGCG 3 cut(s) 1017, 1260, 1365
Bsh1285I CGRYCG 2 cut(s) 1038, 1369
BshFI GGCC 1 cut(s) 271
BshTI ACCGGT 1 cut(s) 947
BsiEI CGRYCG 2 cut(s) 1038, 1369
BsiHKCI CYCGRG 1 cut(s) 1252
BsiSI CCGG 3 cut(s) 105, 948, 1246
BslFI GGGAC 6 cut(s) 435, 669, 901, 984, 1059, 1262
BslI CCNNNNNNNGG 2 cut(s) 653, 962
BsmAI GTCTC 5 cut(s) 231, 609, 817, 828, 1389
BsmBI CGTCTC 1 cut(s) 1389
BsmFI GGGAC 6 cut(s) 435, 669, 901, 984, 1059, 1262
BsmI GAATGC 1 cut(s) 370
BsnI GGCC 1 cut(s) 271
BsoBI CYCGRG 1 cut(s) 1252
Bsp119I TTCGAA 1 cut(s) 792
Bsp1286I GDGCHC 1 cut(s) 539
Bsp143I GATC 7 cut(s) 54, 259, 340, 484, 595, 779, 1428
BspACI CCGC 9 cut(s) 968, 1015, 1034, 1258, 1272, 1278, 1363, 1377, 1432
BspANI GGCC 1 cut(s) 271
BspCNI CTCAG 6 cut(s) 624, 913, 1040, 1141, 1217, 1419
BspFNI CGCG 3 cut(s) 1017, 1260, 1365
BspLI GGNNCC 4 cut(s) 132, 917, 972, 1069
BspMAI CTGCAG 1 cut(s) 779
BspMI ACCTGC 1 cut(s) 1138
BspPI GGATC 2 cut(s) 492, 1423
BspT104I TTCGAA 1 cut(s) 792
BspTI CTTAAG 1 cut(s) 215
BsrFI RCCGGY 1 cut(s) 947
BsrI ACTGG 3 cut(s) 884, 924, 1071
BssAI RCCGGY 1 cut(s) 947
BssECI CCNNGG 3 cut(s) 568, 647, 956
BssMI GATC 7 cut(s) 54, 259, 340, 484, 595, 779, 1428
BssSI CACGAG 1 cut(s) 1392
BssT1I CCWWGG 1 cut(s) 568
Bst2BI CACGAG 1 cut(s) 1392
Bst2UI CCWGG 3 cut(s) 443, 913, 957
Bst4CI ACNGT 3 cut(s) 392, 648, 975
BstAFI CTTAAG 1 cut(s) 215
BstAPI GCANNNNNTGC 1 cut(s) 1319
BstBAI YACGTR 1 cut(s) 616
BstBI TTCGAA 1 cut(s) 792
BstC8I GCNNGC 4 cut(s) 135, 336, 468, 667
BstDEI CTNAG 7 cut(s) 144, 632, 900, 1027, 1149, 1204, 1406
BstDSI CCRYGG 1 cut(s) 647
BstF5I GGATG 5 cut(s) 148, 204, 598, 966, 1011
BstFNI CGCG 3 cut(s) 1017, 1260, 1365
BstKTI GATC 7 cut(s) 57, 262, 343, 487, 598, 782, 1431
BstMAI GTCTC 5 cut(s) 231, 609, 817, 828, 1389
BstMBI GATC 7 cut(s) 54, 259, 340, 484, 595, 779, 1428
BstMCI CGRYCG 2 cut(s) 1038, 1369
BstMWI GCNNNNNNNGC 4 cut(s) 210, 548, 1040, 1319
BstNI CCWGG 3 cut(s) 443, 913, 957
BstNSI RCATGY 1 cut(s) 184
BstSCI CCNGG 4 cut(s) 441, 911, 955, 1245
BstSFI CTRYAG 3 cut(s) 511, 720, 775
BstSLI GKGCMC 1 cut(s) 539
BstSNI TACGTA 1 cut(s) 616
BstUI CGCG 3 cut(s) 1017, 1260, 1365
BstV1I GCAGC 4 cut(s) 128, 1306, 1325, 1328
BstV2I GAAGAC 3 cut(s) 288, 801, 1288
BstX2I RGATCY 2 cut(s) 484, 779
BstYI RGATCY 2 cut(s) 484, 779
Bsu36I CCTNAGG 1 cut(s) 1204
BsuI GTATCC 1 cut(s) 1325
BsuRI GGCC 1 cut(s) 271
BtgI CCRYGG 1 cut(s) 647
BtgZI GCGATG 1 cut(s) 263
BtsCI GGATG 5 cut(s) 148, 204, 598, 966, 1011
BtsI GCAGTG 1 cut(s) 1186
BtsIMutI CAGTG 1 cut(s) 1186
BveI ACCTGC 1 cut(s) 1138
Cac8I GCNNGC 4 cut(s) 135, 336, 468, 667
CaiI CAGNNNCTG 3 cut(s) 1319, 1322, 1352
Cfr10I RCCGGY 1 cut(s) 947
Cfr13I GGNCC 4 cut(s) 269, 915, 971, 1067
CsiI ACCWGGT 1 cut(s) 441
Csp6I GTAC 3 cut(s) 617, 927, 945
CspAI ACCGGT 1 cut(s) 947
CviAII CATG 3 cut(s) 181, 622, 932
CviQI GTAC 3 cut(s) 617, 927, 945
DdeI CTNAG 7 cut(s) 144, 632, 900, 1027, 1149, 1204, 1406
DpnI GATC 7 cut(s) 56, 261, 342, 486, 597, 781, 1430
DpnII GATC 7 cut(s) 54, 259, 340, 484, 595, 779, 1428
DraI TTTAAA 1 cut(s) 40
DriI GACNNNNNGTC 1 cut(s) 1292
Eam1105I GACNNNNNGTC 1 cut(s) 1292
Eco105I TACGTA 1 cut(s) 616
Eco130I CCWWGG 1 cut(s) 568
Eco47I GGWCC 3 cut(s) 915, 971, 1067
Eco81I CCTNAGG 1 cut(s) 1204
Eco88I CYCGRG 1 cut(s) 1252
EcoO109I RGGNCCY 2 cut(s) 915, 1067
EcoRI GAATTC 1 cut(s) 752
EcoRII CCWGG 3 cut(s) 441, 911, 955
EcoT14I CCWWGG 1 cut(s) 568
EcoT22I ATGCAT 1 cut(s) 372
ErhI CCWWGG 1 cut(s) 568
Esp3I CGTCTC 1 cut(s) 1389
FaeI CATG 3 cut(s) 184, 625, 935
FalI AAGNNNNNCTT 2 cut(s) 1150, 1182
FaqI GGGAC 6 cut(s) 435, 669, 901, 984, 1059, 1262
FatI CATG 3 cut(s) 180, 621, 931
FauI CCCGC 1 cut(s) 961
FblI GTMKAC 1 cut(s) 1213
Fnu4HI GCNGC 6 cut(s) 117, 1258, 1314, 1317, 1320, 1377
FokI GGATG 5 cut(s) 135, 191, 605, 973, 998
Fsp4HI GCNGC 6 cut(s) 117, 1258, 1314, 1317, 1320, 1377
FspBI CTAG 2 cut(s) 552, 569
GluI GCNGC 6 cut(s) 117, 1258, 1314, 1317, 1320, 1377
GsaI CCCAGC 1 cut(s) 213
GsuI CTGGAG 2 cut(s) 149, 620
HaeIII GGCC 1 cut(s) 271
HapII CCGG 3 cut(s) 105, 948, 1246
Hin1II CATG 3 cut(s) 184, 625, 935
HincII GTYRAC 1 cut(s) 559
HindII GTYRAC 1 cut(s) 559
HindIII AAGCTT 2 cut(s) 640, 1411
HinfI GANTC 5 cut(s) 167, 602, 789, 1250, 1337
HpaII CCGG 3 cut(s) 105, 948, 1246
HphI GGTGA 3 cut(s) 380, 557, 1241
Hpy166II GTNNAC 5 cut(s) 559, 929, 953, 1214, 1232
Hpy188I TCNGA 6 cut(s) 51, 833, 903, 1150, 1286, 1409
Hpy188III TCNNGA 7 cut(s) 415, 599, 631, 1106, 1170, 1206, 1383
Hpy8I GTNNAC 5 cut(s) 559, 929, 953, 1214, 1232
HpyAV CCTTC 4 cut(s) 313, 845, 1047, 1128
HpyCH4III ACNGT 3 cut(s) 392, 648, 975
HpyCH4IV ACGT 2 cut(s) 615, 1059
HpyCH4V TGCA 8 cut(s) 100, 300, 338, 370, 470, 735, 777, 887
HpyF10VI GCNNNNNNNGC 4 cut(s) 210, 548, 1040, 1319
HpyF3I CTNAG 7 cut(s) 144, 632, 900, 1027, 1149, 1204, 1406
HpySE526I ACGT 2 cut(s) 615, 1059
Hsp92II CATG 3 cut(s) 184, 625, 935
Kzo9I GATC 7 cut(s) 54, 259, 340, 484, 595, 779, 1428
LmnI GCTCC 1 cut(s) 130
Lsp1109I GCAGC 4 cut(s) 128, 1306, 1325, 1328
LweI GCATC 5 cut(s) 157, 213, 321, 949, 1358
MabI ACCWGGT 1 cut(s) 441
MaeI CTAG 2 cut(s) 552, 569
MaeII ACGT 2 cut(s) 615, 1059
MaeIII GTNAC 2 cut(s) 392, 611
MalI GATC 7 cut(s) 56, 261, 342, 486, 597, 781, 1430
MboI GATC 7 cut(s) 54, 259, 340, 484, 595, 779, 1428
MboII GAAGA 8 cut(s) 64, 184, 293, 377, 715, 806, 1170, 1288
MflI RGATCY 2 cut(s) 484, 779
MhlI GDGCHC 1 cut(s) 539
MluCI AATT 5 cut(s) 409, 693, 752, 1022, 1113
MlyI GAGTC 4 cut(s) 176, 611, 1244, 1346
MmeI TCCRAC 2 cut(s) 29, 1309
Mph1103I ATGCAT 1 cut(s) 372
MroXI GAANNNNTTC 2 cut(s) 81, 1165
MseI TTAA 4 cut(s) 39, 123, 216, 1359
MspA1I CMGCKG 2 cut(s) 119, 1319
MspCI CTTAAG 1 cut(s) 215
MspI CCGG 3 cut(s) 105, 948, 1246
MspR9I CCNGG 4 cut(s) 443, 913, 957, 1247
MssI GTTTAAAC 1 cut(s) 40
Mva1269I GAATGC 1 cut(s) 370
MvaI CCWGG 3 cut(s) 443, 913, 957
MvnI CGCG 3 cut(s) 1017, 1260, 1365
MwoI GCNNNNNNNGC 4 cut(s) 210, 548, 1040, 1319
NciI CCSGG 1 cut(s) 1247
NdeII GATC 7 cut(s) 54, 259, 340, 484, 595, 779, 1428
NlaIII CATG 3 cut(s) 184, 625, 935
NlaIV GGNNCC 4 cut(s) 132, 917, 972, 1069
NmeAIII GCCGAG 1 cut(s) 297
NmuCI GTSAC 1 cut(s) 392
NsiI ATGCAT 1 cut(s) 372
NspI RCATGY 1 cut(s) 184
NspV TTCGAA 1 cut(s) 792
PaeR7I CTCGAG 1 cut(s) 1252
PctI GAATGC 1 cut(s) 370
PdmI GAANNNNTTC 2 cut(s) 81, 1165
PfeI GAWTC 1 cut(s) 789
PflFI GACNNNGTC 2 cut(s) 426, 1071
PinAI ACCGGT 1 cut(s) 947
PkrI GCNGC 6 cut(s) 118, 1259, 1315, 1318, 1321, 1378
PleI GAGTC 4 cut(s) 175, 610, 1244, 1345
PmeI GTTTAAAC 1 cut(s) 40
PpsI GAGTC 4 cut(s) 175, 610, 1244, 1345
Ppu21I YACGTR 1 cut(s) 616
PpuMI RGGWCCY 2 cut(s) 915, 1067
Psp1406I AACGTT 1 cut(s) 1059
Psp5II RGGWCCY 2 cut(s) 915, 1067
Psp6I CCWGG 3 cut(s) 441, 911, 955
PspFI CCCAGC 1 cut(s) 209
PspGI CCWGG 3 cut(s) 441, 911, 955
PspN4I GGNNCC 4 cut(s) 132, 917, 972, 1069
PspPI GGNCC 4 cut(s) 269, 915, 971, 1067
PspPPI RGGWCCY 2 cut(s) 915, 1067
PspXI VCTCGAGB 1 cut(s) 1252
PstI CTGCAG 1 cut(s) 779
PstNI CAGNNNCTG 3 cut(s) 1319, 1322, 1352
PsuI RGATCY 2 cut(s) 484, 779
PsyI GACNNNGTC 2 cut(s) 426, 1071
PvuII CAGCTG 2 cut(s) 119, 1319
RsaI GTAC 3 cut(s) 618, 928, 946
RsaNI GTAC 3 cut(s) 617, 927, 945
SaqAI TTAA 4 cut(s) 39, 123, 216, 1359
SatI GCNGC 6 cut(s) 117, 1258, 1314, 1317, 1320, 1377
Sau3AI GATC 7 cut(s) 54, 259, 340, 484, 595, 779, 1428
Sau96I GGNCC 4 cut(s) 269, 915, 971, 1067
SchI GAGTC 4 cut(s) 176, 611, 1244, 1346
ScrFI CCNGG 4 cut(s) 443, 913, 957, 1247
SduI GDGCHC 1 cut(s) 539
SexAI ACCWGGT 1 cut(s) 441
SfaNI GCATC 5 cut(s) 157, 213, 321, 949, 1358
SfcI CTRYAG 3 cut(s) 511, 720, 775
Sfr274I CTCGAG 1 cut(s) 1252
SfuI TTCGAA 1 cut(s) 792
SinI GGWCC 3 cut(s) 915, 971, 1067
SlaI CTCGAG 1 cut(s) 1252
SmlI CTYRAG 3 cut(s) 215, 1252, 1267
SmoI CTYRAG 3 cut(s) 215, 1252, 1267
SnaBI TACGTA 1 cut(s) 616
Sse9I AATT 5 cut(s) 409, 693, 752, 1022, 1113
SsiI CCGC 9 cut(s) 968, 1015, 1034, 1258, 1272, 1278, 1363, 1377, 1432
SspMI CTAG 2 cut(s) 552, 569
StyD4I CCNGG 4 cut(s) 441, 911, 955, 1245
StyI CCWWGG 1 cut(s) 568
TaaI ACNGT 3 cut(s) 392, 648, 975
TaiI ACGT 2 cut(s) 618, 1062
TaqI TCGA 9 cut(s) 170, 792, 876, 1038, 1099, 1187, 1253, 1416, 1427
TaqII GACCGA 1 cut(s) 1383
TasI AATT 5 cut(s) 409, 693, 752, 1022, 1113
TatI WGTACW 1 cut(s) 926
TauI GCSGC 2 cut(s) 1260, 1379
TfiI GAWTC 1 cut(s) 789
Tru1I TTAA 4 cut(s) 39, 123, 216, 1359
Tru9I TTAA 4 cut(s) 39, 123, 216, 1359
TscAI CASTG 1 cut(s) 1186
TseFI GTSAC 1 cut(s) 392
TseI GCWGC 4 cut(s) 116, 1313, 1316, 1319
Tsp45I GTSAC 1 cut(s) 392
TspDTI ATGAA 3 cut(s) 149, 948, 1139
TspGWI ACGGA 1 cut(s) 836
TspRI CASTG 1 cut(s) 1186
Tth111I GACNNNGTC 2 cut(s) 426, 1071
Vha464I CTTAAG 1 cut(s) 215
VpaK11BI GGWCC 3 cut(s) 915, 971, 1067
XapI RAATTY 3 cut(s) 752, 1022, 1113
XceI RCATGY 1 cut(s) 184
XhoI CTCGAG 1 cut(s) 1252
XmaJI CCTAGG 1 cut(s) 568
XmiI GTMKAC 1 cut(s) 1213
XmnI GAANNNNTTC 2 cut(s) 81, 1165
XspI CTAG 2 cut(s) 552, 569
Zsp2I ATGCAT 1 cut(s) 372
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.