MD05G1193800.v1.1
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
32165866 .. 32171494
5629 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1193800.v1.1.491

Sequence Viewer

Length: 1362 bp
ATGGAGCATGTGATTGCTGGGAAGTTTAAGCTGGGGAGGAAGATTGGGAGTGGGTCTTTCGGAGAACTCTATTTAGGTGTAAATGTACAAAGTGGGGAGGAGGTGGCTGTTAAGCTGGAACCTGTGAAGACCAAGCATCCCCAGCTTCATTATGAGTCAAAATTGTATATGCTTCTTCAAGGAGGAACTGGAATACCCCACCTCAAGTGGTTTGGAGTTGAGGGTGACTACAACATCATGGTTATTGACCTTCTTGGACCTAGTTTGGAAGATTTGTTCAACTACTGCAATAGGAAGTTCACATTAAAAACAGTGTTGATGCTTGCAGATCAATTGATTAACAGAGTTGAATACATGCACTCAAGAGGTTTTCTTCACCGTGATATAAAGCCAGACAACTTTTTAGTGGGCCTAGCGCGTAAAGCCAATCAGGTGTATGCTATTGATTTTGGCCTTGCAAAGAAGTATAGGGATCTTCAGACTCATAAGCACATACCATACAGGGAGAACAAGAACCTCACAGGAACTGCTCGCTATGCAAGTGTTAACACCCACCTTGGAATTGAGCAAAGCAGAAGAGATGATTTGGAATCTCTTGGTTATGTGCTGATGTATTTCCTAAGAGGAAGCCTTCCGTGGCAAGGTTTAAAAGCTGGTACAAAGAAGCAAAAGTACGACAAAATCAGTGAAAAGAAAATGTCAACTCCTATAGAGGTGCTGTGCAGATCTCATCCAGCTGAATTTGTATCCTACTTTCATTACTGCCGATCATTGCGGTTTGAAGACAAGCCAGATTATTCTTATTTAAAGAGGCTTTTCAGGGACTTATTTATTCGAGAAGGTTATCAATTTGACTATATCTTTGACTGGACTGTGTTGAAGCACCCTCAGATTGGTGGCAGTTCTAGAGGATGGCATGCCAGTGGGAAAGCGGGTTTAAGCGCAGGGCCATCTATGGAAAGACCTGAAAGAGGATCAGTTGGAAAAGAGATTCGAGATAGATTCTCGGGTGCAGTTGAAGCATTTTCAAGGAGAAACACCTCAGGTTCTAGTCCACGTCAGGATCATTTGAAACACAGGTCTTTTGACGATGTACCTTCACCCAGAGATGCGCACCATGATTCTGAAAGGGGACGCAATTCCTCTCGGTATGGCAGCACTTCAAGAAAGGCTATGGCTAGCAGTAAGCCAAGCTCCTCAGGTGATCACACTCCCAGTGACGGTCGCACAAGCAGATTAGTCTCAAGCAGTAGCCGCCCATCTACTGGGAACAGAGGTTTCGAACCCAAGCGCTCTGCAGCTGCAAGAGGCAGCCGAGATGATCCTCTCCGGAGCTTTGAGCTCCTTTCAATCAGGAAGTAA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

454

Amino Acids

51.44

Weight (kDa)

9.79

Isoelectric Point (pI)

49.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 10 - 227 1.2e-25 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 10 - 269 1.7e-14 Protein tyrosine and serine/threonine kinase
Pkinase_fungal PF17667 118 - 206 1.9e-08 Fungal protein kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1113
AccB7I CCANNNNNTGG 1 cut(s) 1265
AccII CGCG 1 cut(s) 418
AccIII TCCGGA 1 cut(s) 1329
AciI CCGC 3 cut(s) 775, 932, 1255
AclWI GGATC 4 cut(s) 480, 982, 1071, 1316
AcsI RAATTY 1 cut(s) 740
AcuI CTGAAG 1 cut(s) 461
AfaI GTAC 4 cut(s) 87, 658, 674, 1095
AfeI AGCGCT 1 cut(s) 1292
AfiI CCNNNNNNNGG 5 cut(s) 641, 893, 971, 1220, 1265
AjiI CACGTC 1 cut(s) 1058
AloI GAACNNNNNNTCC 2 cut(s) 260, 292
AluBI AGCT 9 cut(s) 31, 115, 145, 653, 737, 1194, 1301, 1335, 1342
AluI AGCT 9 cut(s) 31, 115, 145, 653, 737, 1194, 1301, 1335, 1342
Alw21I GWGCWC 1 cut(s) 1344
Alw26I GTCTC 1 cut(s) 1246
AlwI GGATC 4 cut(s) 480, 982, 1071, 1316
AlwNI CAGNNNCTG 1 cut(s) 527
Ama87I CYCGRG 1 cut(s) 1006
Aor13HI TCCGGA 1 cut(s) 1329
Aor51HI AGCGCT 1 cut(s) 1292
AoxI GGCC 3 cut(s) 409, 451, 947
ApeKI GCWGC 4 cut(s) 1155, 1298, 1301, 1311
ApoI RAATTY 1 cut(s) 740
ArsI GACNNNNNNTTYG 2 cut(s) 845, 877
AspLEI GCGC 4 cut(s) 418, 944, 1114, 1293
AspS9I GGNCC 3 cut(s) 257, 409, 947
AsuHPI GGTGA 4 cut(s) 236, 368, 1092, 1214
AsuII TTCGAA 1 cut(s) 1281
AsuNHI GCTAGC 1 cut(s) 1178
AvaI CYCGRG 1 cut(s) 1006
AvaII GGWCC 1 cut(s) 257
AxyI CCTNAGG 2 cut(s) 1042, 1198
BanII GRGCYC 1 cut(s) 1344
BarI GAAGNNNNNNTAC 2 cut(s) 656, 688
BbsI GAAGAC 2 cut(s) 134, 789
Bbv12I GWGCWC 1 cut(s) 1344
BbvI GCAGC 4 cut(s) 1167, 1288, 1310, 1323
BccI CCATC 3 cut(s) 906, 958, 1267
BciVI GTATCC 1 cut(s) 757
BclI TGATCA 1 cut(s) 1204
BcoDI GTCTC 1 cut(s) 1246
BfaI CTAG 5 cut(s) 261, 413, 906, 1050, 1179
BfmI CTRYAG 2 cut(s) 708, 1296
BfoI RGCGCY 1 cut(s) 1294
BfuI GTATCC 1 cut(s) 757
BglII AGATCT 1 cut(s) 725
BisI GCNGC 5 cut(s) 1156, 1255, 1299, 1302, 1312
BlsI GCNGC 5 cut(s) 1157, 1256, 1300, 1303, 1313
Bme18I GGWCC 1 cut(s) 257
BmeT110I CYCGRG 1 cut(s) 1006
BmgBI CACGTC 1 cut(s) 1058
BmgT120I GGNCC 3 cut(s) 257, 409, 947
BmiI GGNNCC 1 cut(s) 120
BmrI ACTGGG 2 cut(s) 1209, 1275
BmsI GCATC 3 cut(s) 145, 309, 1099
BmtI GCTAGC 1 cut(s) 1182
BmuI ACTGGG 2 cut(s) 1209, 1275
BpiI GAAGAC 2 cut(s) 134, 789
Bpu14I TTCGAA 1 cut(s) 1281
BpuEI CTTGAG 3 cut(s) 188, 346, 1228
BsaJI CCNNGG 2 cut(s) 556, 635
BsaWI WCCGGW 1 cut(s) 1329
Bsc4I CCNNNNNNNGG 5 cut(s) 641, 893, 971, 1220, 1265
Bse1I ACTGG 5 cut(s) 193, 872, 921, 1215, 1270
Bse21I CCTNAGG 2 cut(s) 1042, 1198
Bse3DI GCAATG 1 cut(s) 770
BseAI TCCGGA 1 cut(s) 1329
BseDI CCNNGG 2 cut(s) 556, 635
BseGI GGATG 3 cut(s) 136, 730, 917
BseLI CCNNNNNNNGG 5 cut(s) 641, 893, 971, 1220, 1265
BseMI GCAATG 1 cut(s) 770
BseMII CTCAG 3 cut(s) 902, 1056, 1212
BseNI ACTGG 5 cut(s) 193, 872, 921, 1215, 1270
BseRI GAGGAG 2 cut(s) 113, 1186
BseXI GCAGC 4 cut(s) 1167, 1288, 1310, 1323
BseYI CCCAGC 3 cut(s) 17, 31, 141
BsgI GTGCAG 2 cut(s) 742, 1032
Bsh1236I CGCG 1 cut(s) 418
Bsh1285I CGRYCG 1 cut(s) 1225
BshFI GGCC 3 cut(s) 411, 453, 949
BsiEI CGRYCG 1 cut(s) 1225
BsiHKAI GWGCWC 1 cut(s) 1344
BsiHKCI CYCGRG 1 cut(s) 1006
BsiSI CCGG 1 cut(s) 1330
BslFI GGGAC 2 cut(s) 836, 1146
BslI CCNNNNNNNGG 5 cut(s) 641, 893, 971, 1220, 1265
BsmAI GTCTC 1 cut(s) 1246
BsmFI GGGAC 2 cut(s) 836, 1146
BsnI GGCC 3 cut(s) 411, 453, 949
BsoBI CYCGRG 1 cut(s) 1006
Bsp119I TTCGAA 1 cut(s) 1281
Bsp1286I GDGCHC 1 cut(s) 1344
Bsp13I TCCGGA 1 cut(s) 1329
Bsp1407I TGTACA 1 cut(s) 85
Bsp143I GATC 8 cut(s) 328, 472, 725, 767, 974, 1063, 1204, 1321
BspACI CCGC 3 cut(s) 775, 932, 1255
BspANI GGCC 3 cut(s) 411, 453, 949
BspCNI CTCAG 3 cut(s) 901, 1055, 1211
BspEI TCCGGA 1 cut(s) 1329
BspFNI CGCG 1 cut(s) 418
BspLI GGNNCC 1 cut(s) 120
BspMAI CTGCAG 1 cut(s) 1300
BspOI GCTAGC 1 cut(s) 1182
BspPI GGATC 4 cut(s) 480, 982, 1071, 1316
BspT104I TTCGAA 1 cut(s) 1281
BsrDI GCAATG 1 cut(s) 770
BsrGI TGTACA 1 cut(s) 85
BsrI ACTGG 5 cut(s) 193, 872, 921, 1215, 1270
BssECI CCNNGG 2 cut(s) 556, 635
BssMI GATC 8 cut(s) 328, 472, 725, 767, 974, 1063, 1204, 1321
BssT1I CCWWGG 1 cut(s) 556
Bst4CI ACNGT 4 cut(s) 313, 380, 874, 1223
Bst6I CTCTTC 1 cut(s) 571
BstAUI TGTACA 1 cut(s) 85
BstBI TTCGAA 1 cut(s) 1281
BstC8I GCNNGC 4 cut(s) 324, 532, 918, 1180
BstDEI CTNAG 4 cut(s) 620, 888, 1042, 1198
BstDSI CCRYGG 1 cut(s) 635
BstENI CCTNNNNNAGG 1 cut(s) 969
BstF5I GGATG 3 cut(s) 136, 730, 917
BstFNI CGCG 1 cut(s) 418
BstH2I RGCGCY 1 cut(s) 1294
BstHHI GCGC 4 cut(s) 418, 944, 1114, 1293
BstKTI GATC 8 cut(s) 331, 475, 728, 770, 977, 1066, 1207, 1324
BstMAI GTCTC 1 cut(s) 1246
BstMBI GATC 8 cut(s) 328, 472, 725, 767, 974, 1063, 1204, 1321
BstMCI CGRYCG 1 cut(s) 1225
BstMWI GCNNNNNNNGC 5 cut(s) 142, 422, 536, 1019, 1254
BstNSI RCATGY 3 cut(s) 11, 358, 920
BstSFI CTRYAG 2 cut(s) 708, 1296
BstUI CGCG 1 cut(s) 418
BstV1I GCAGC 4 cut(s) 1167, 1288, 1310, 1323
BstV2I GAAGAC 2 cut(s) 134, 789
BstX2I RGATCY 2 cut(s) 472, 725
BstYI RGATCY 2 cut(s) 472, 725
Bsu36I CCTNAGG 2 cut(s) 1042, 1198
BsuI GTATCC 1 cut(s) 757
BsuRI GGCC 3 cut(s) 411, 453, 949
BtgI CCRYGG 1 cut(s) 635
BtrI CACGTC 1 cut(s) 1058
BtsCI GGATG 3 cut(s) 136, 730, 917
BtsIMutI CAGTG 4 cut(s) 318, 691, 928, 1222
Cac8I GCNNGC 4 cut(s) 324, 532, 918, 1180
CaiI CAGNNNCTG 1 cut(s) 527
CfoI GCGC 4 cut(s) 418, 944, 1114, 1293
Cfr13I GGNCC 3 cut(s) 257, 409, 947
CseI GACGC 1 cut(s) 1143
Csp6I GTAC 4 cut(s) 86, 657, 673, 1094
CviAII CATG 5 cut(s) 8, 238, 355, 917, 1118
CviQI GTAC 4 cut(s) 86, 657, 673, 1094
DdeI CTNAG 4 cut(s) 620, 888, 1042, 1198
DpnI GATC 8 cut(s) 330, 474, 727, 769, 976, 1065, 1206, 1323
DpnII GATC 8 cut(s) 328, 472, 725, 767, 974, 1063, 1204, 1321
DraI TTTAAA 2 cut(s) 648, 807
Eam1104I CTCTTC 1 cut(s) 571
EarI CTCTTC 1 cut(s) 571
Ecl136II GAGCTC 1 cut(s) 1342
Eco130I CCWWGG 1 cut(s) 556
Eco24I GRGCYC 1 cut(s) 1344
Eco47I GGWCC 1 cut(s) 257
Eco47III AGCGCT 1 cut(s) 1292
Eco53kI GAGCTC 1 cut(s) 1342
Eco57I CTGAAG 1 cut(s) 461
Eco81I CCTNAGG 2 cut(s) 1042, 1198
Eco88I CYCGRG 1 cut(s) 1006
EcoICRI GAGCTC 1 cut(s) 1342
EcoNI CCTNNNNNAGG 1 cut(s) 969
EcoT14I CCWWGG 1 cut(s) 556
EcoT38I GRGCYC 1 cut(s) 1344
ErhI CCWWGG 1 cut(s) 556
FaeI CATG 5 cut(s) 11, 241, 358, 920, 1121
FaqI GGGAC 2 cut(s) 836, 1146
FatI CATG 5 cut(s) 7, 237, 354, 916, 1117
FauI CCCGC 1 cut(s) 925
FbaI TGATCA 1 cut(s) 1204
Fnu4HI GCNGC 5 cut(s) 1156, 1255, 1299, 1302, 1312
FokI GGATG 3 cut(s) 123, 717, 924
FriOI GRGCYC 1 cut(s) 1344
Fsp4HI GCNGC 5 cut(s) 1156, 1255, 1299, 1302, 1312
FspAI RTGCGCAY 1 cut(s) 1113
FspBI CTAG 5 cut(s) 261, 413, 906, 1050, 1179
FspI TGCGCA 1 cut(s) 1113
GlaI GCGC 4 cut(s) 417, 943, 1113, 1292
GluI GCNGC 5 cut(s) 1156, 1255, 1299, 1302, 1312
GsaI CCCAGC 3 cut(s) 21, 35, 145
HaeII RGCGCY 1 cut(s) 1294
HaeIII GGCC 3 cut(s) 411, 453, 949
HapII CCGG 1 cut(s) 1330
HgaI GACGC 1 cut(s) 1143
HhaI GCGC 4 cut(s) 418, 944, 1114, 1293
Hin1II CATG 5 cut(s) 11, 241, 358, 920, 1121
Hin6I GCGC 4 cut(s) 416, 942, 1112, 1291
HinP1I GCGC 4 cut(s) 416, 942, 1112, 1291
HincII GTYRAC 2 cut(s) 547, 702
HindII GTYRAC 2 cut(s) 547, 702
HinfI GANTC 6 cut(s) 155, 481, 590, 991, 1002, 1121
HpaI GTTAAC 1 cut(s) 547
HpaII CCGG 1 cut(s) 1330
HphI GGTGA 4 cut(s) 236, 368, 1092, 1214
Hpy166II GTNNAC 4 cut(s) 300, 547, 702, 1055
Hpy188I TCNGA 4 cut(s) 62, 480, 891, 1126
Hpy188III TCNNGA 8 cut(s) 363, 836, 906, 995, 1061, 1164, 1330, 1354
Hpy8I GTNNAC 4 cut(s) 300, 547, 702, 1055
HpyAV CCTTC 4 cut(s) 260, 641, 833, 1107
HpyCH4III ACNGT 4 cut(s) 313, 380, 874, 1223
HpyCH4IV ACGT 1 cut(s) 1057
HpyCH4V TGCA 9 cut(s) 288, 326, 358, 458, 539, 723, 1013, 1298, 1304
HpyF10VI GCNNNNNNNGC 5 cut(s) 142, 422, 536, 1019, 1254
HpyF3I CTNAG 4 cut(s) 620, 888, 1042, 1198
HpySE526I ACGT 1 cut(s) 1057
Hsp92II CATG 5 cut(s) 11, 241, 358, 920, 1121
HspAI GCGC 4 cut(s) 416, 942, 1112, 1291
Kpn2I TCCGGA 1 cut(s) 1329
Ksp22I TGATCA 1 cut(s) 1204
KspAI GTTAAC 1 cut(s) 547
Kzo9I GATC 8 cut(s) 328, 472, 725, 767, 974, 1063, 1204, 1321
LmnI GCTCC 4 cut(s) 4, 1199, 1332, 1347
Lsp1109I GCAGC 4 cut(s) 1167, 1288, 1310, 1323
LweI GCATC 3 cut(s) 145, 309, 1099
MaeI CTAG 5 cut(s) 261, 413, 906, 1050, 1179
MaeII ACGT 1 cut(s) 1057
MaeIII GTNAC 2 cut(s) 224, 1217
MalI GATC 8 cut(s) 330, 474, 727, 769, 976, 1065, 1206, 1323
MboI GATC 8 cut(s) 328, 472, 725, 767, 974, 1063, 1204, 1321
MboII GAAGA 8 cut(s) 52, 139, 167, 281, 365, 467, 588, 794
MfeI CAATTG 1 cut(s) 332
MflI RGATCY 2 cut(s) 472, 725
MhlI GDGCHC 1 cut(s) 1344
MluCI AATT 6 cut(s) 161, 332, 561, 740, 848, 1138
MlyI GAGTC 2 cut(s) 164, 475
MmeI TCCRAC 1 cut(s) 961
MroI TCCGGA 1 cut(s) 1329
MseI TTAA 8 cut(s) 27, 111, 305, 339, 546, 647, 806, 938
MslI CAYNNNNRTG 1 cut(s) 921
MspA1I CMGCKG 2 cut(s) 737, 1301
MspI CCGG 1 cut(s) 1330
MunI CAATTG 1 cut(s) 332
MvnI CGCG 1 cut(s) 418
MwoI GCNNNNNNNGC 5 cut(s) 142, 422, 536, 1019, 1254
NdeII GATC 8 cut(s) 328, 472, 725, 767, 974, 1063, 1204, 1321
NheI GCTAGC 1 cut(s) 1178
NlaIII CATG 5 cut(s) 11, 241, 358, 920, 1121
NlaIV GGNNCC 1 cut(s) 120
NmeAIII GCCGAG 1 cut(s) 1340
NmuCI GTSAC 2 cut(s) 224, 1217
NsbI TGCGCA 1 cut(s) 1113
NspI RCATGY 3 cut(s) 11, 358, 920
NspV TTCGAA 1 cut(s) 1281
PaeI GCATGC 1 cut(s) 920
PfeI GAWTC 4 cut(s) 590, 991, 1002, 1121
PflMI CCANNNNNTGG 1 cut(s) 1265
PkrI GCNGC 5 cut(s) 1157, 1256, 1300, 1303, 1313
PleI GAGTC 2 cut(s) 163, 475
PpsI GAGTC 2 cut(s) 163, 475
Psp124BI GAGCTC 1 cut(s) 1344
PspFI CCCAGC 3 cut(s) 17, 31, 141
PspN4I GGNNCC 1 cut(s) 120
PspPI GGNCC 3 cut(s) 257, 409, 947
PstI CTGCAG 1 cut(s) 1300
PstNI CAGNNNCTG 1 cut(s) 527
PsuI RGATCY 2 cut(s) 472, 725
PvuII CAGCTG 2 cut(s) 737, 1301
RsaI GTAC 4 cut(s) 87, 658, 674, 1095
RsaNI GTAC 4 cut(s) 86, 657, 673, 1094
RseI CAYNNNNRTG 1 cut(s) 921
SacI GAGCTC 1 cut(s) 1344
SaqAI TTAA 8 cut(s) 27, 111, 305, 339, 546, 647, 806, 938
SatI GCNGC 5 cut(s) 1156, 1255, 1299, 1302, 1312
Sau3AI GATC 8 cut(s) 328, 472, 725, 767, 974, 1063, 1204, 1321
Sau96I GGNCC 3 cut(s) 257, 409, 947
SchI GAGTC 2 cut(s) 164, 475
SduI GDGCHC 1 cut(s) 1344
SfaNI GCATC 3 cut(s) 145, 309, 1099
SfcI CTRYAG 2 cut(s) 708, 1296
SfuI TTCGAA 1 cut(s) 1281
SinI GGWCC 1 cut(s) 257
SmiMI CAYNNNNRTG 1 cut(s) 921
SmlI CTYRAG 3 cut(s) 203, 361, 1243
SmoI CTYRAG 3 cut(s) 203, 361, 1243
SphI GCATGC 1 cut(s) 920
Sse9I AATT 6 cut(s) 161, 332, 561, 740, 848, 1138
SsiI CCGC 3 cut(s) 775, 932, 1255
SspMI CTAG 5 cut(s) 261, 413, 906, 1050, 1179
SstI GAGCTC 1 cut(s) 1344
StyI CCWWGG 1 cut(s) 556
TaaI ACNGT 4 cut(s) 313, 380, 874, 1223
TaiI ACGT 1 cut(s) 1060
TaqI TCGA 3 cut(s) 835, 994, 1281
TasI AATT 6 cut(s) 161, 332, 561, 740, 848, 1138
TatI WGTACW 1 cut(s) 85
TauI GCSGC 1 cut(s) 1257
TfiI GAWTC 4 cut(s) 590, 991, 1002, 1121
Tru1I TTAA 8 cut(s) 27, 111, 305, 339, 546, 647, 806, 938
Tru9I TTAA 8 cut(s) 27, 111, 305, 339, 546, 647, 806, 938
TscAI CASTG 4 cut(s) 318, 691, 928, 1222
TseFI GTSAC 2 cut(s) 224, 1217
TseI GCWGC 4 cut(s) 1155, 1298, 1301, 1311
Tsp45I GTSAC 2 cut(s) 224, 1217
TspDTI ATGAA 2 cut(s) 137, 746
TspGWI ACGGA 1 cut(s) 624
TspRI CASTG 4 cut(s) 318, 691, 928, 1222
Van91I CCANNNNNTGG 1 cut(s) 1265
VpaK11BI GGWCC 1 cut(s) 257
XagI CCTNNNNNAGG 1 cut(s) 969
XapI RAATTY 1 cut(s) 740
XbaI TCTAGA 1 cut(s) 905
XceI RCATGY 3 cut(s) 11, 358, 920
XspI CTAG 5 cut(s) 261, 413, 906, 1050, 1179
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.