pycom05g18120
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
21127881 .. 21132428
4548 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g18120.5

Sequence Viewer

Length: 1371 bp
ATGGAGCATGTGATTGCGGGGAAGTTTAAGCTGGGGAGGAAGATTGGGAGTGGGTCTTTCGGAGAACTCTATTTAGGTGTAAATGTACAAAGTGGGGAGGAGGTGGCTGTTAAGCTGGAACCTGTGAAGACCAAGCATCCCCAGCTTCATTATGAGTCAAAATTGTATATGCTTCTTCAAGGAGGAACTGGAATACCCCACCTCAAGTGGTTTGGAGTTGAGGGTGACTACAACATCATGGTTATTGACCTTCTTGGACCCAGTTTGGAAGATTTGTTCAACTACTGCAATAGGAAGTTCACATTAAAAACAGTGCTGATGCTTGCAGATCAATTGATTAACAGGGTTGAATACATGCACACAAGAGGTTTTCTTCACCGTGATATAAAGCCAGACAACTTTTTAGTGGGCCTAGCGCGTAAAGCCAATCAGGTGTATGCTATTGATTTTGGCCTTGCAAAGAAGTATAGGGATCTTCAGACTCATAAGCACATACCGTACAGGGAGAACAAGAACCTCACAGGAACTGCTCGCTATGCAAGTGTTAACACCCACCTTGGAATTGAGCAAAGCAGAAGAGATGATTTGGAATCTCTTGGTTATGTGCTGATGTATTTCTTAAGAGGAAGCCTTCCCTGGCAAGGTTTAAAAGCTGGTACAAAGAAGCAAAAGTACGACAAAATCAGTGAAAAGAAAATGACAACTCCTATAGAGGTGCTGTGCAGATCTCATCCAGCTGAATTTGTATCCTACTTTCATTACTGCCATCATGATCGATCATTGCGGTTTGAAGACAAGCCAGATTATTCTTATTTAAAGAGGCTTTTCAGAGACTTATTTATTCGAGAAGGTTATCAATTTGACTATATATTTGACTGGACTGTGTTGAAGCACCCTCAGATTGGTGGCAGCTCTAGAGGATGGCATGCCAGTGGGAAAGCGGGTTTAAGCGCAGGGCCATCTATGGAAAGACCTGAAAGAGGATCAGTTGGGAAAGAGATTCGAGATCGATTCTCGGGTGCAGTTGAAGCATTTTCAAGGAGAAACACCTCAGGTTCTAGTCCACGTCAGGATCATTTGAAACACAGGTCTTTTGACGATGTACCTTCACCCAGAGATGCGCACCATGATTCTGAAAGGGGACGCAATTCCTCTCGGTATGGCAGCACTTCAAGAAAGGCTATGGCCAGCAGTAAGCCAAGCTCCTCAGGTGATCACACTCCCAGTGACGGTCGCACAAGCAGATTAGTCTCAAGCAGTAGCCGCCCATCTACCGGGAACAGAGGTTACGAACCCAAGCGCTCTGCAGCTGCAAGAGGCAGCCGAGATGATCCTCTCCGGAGCTTTGAGCTCCTTTCAATCAGGAAGTAA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

457

Amino Acids

51.87

Weight (kDa)

9.74

Isoelectric Point (pI)

47.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1122
AccII CGCG 1 cut(s) 418
AccIII TCCGGA 1 cut(s) 1338
AciI CCGC 4 cut(s) 17, 784, 941, 1264
AclWI GGATC 4 cut(s) 480, 991, 1080, 1325
AcoI YGGCCR 1 cut(s) 1185
AcsI RAATTY 1 cut(s) 740
AcuI CTGAAG 1 cut(s) 461
AfaI GTAC 5 cut(s) 87, 500, 658, 674, 1104
AfeI AGCGCT 1 cut(s) 1301
AfiI CCNNNNNNNGG 5 cut(s) 641, 902, 980, 1229, 1274
AflII CTTAAG 1 cut(s) 619
AjiI CACGTC 1 cut(s) 1067
AjnI CCWGG 1 cut(s) 635
AloI GAACNNNNNNTCC 2 cut(s) 260, 292
Alw21I GWGCWC 1 cut(s) 1353
Alw26I GTCTC 2 cut(s) 825, 1255
AlwI GGATC 4 cut(s) 480, 991, 1080, 1325
AlwNI CAGNNNCTG 1 cut(s) 527
Ama87I CYCGRG 1 cut(s) 1015
Aor13HI TCCGGA 1 cut(s) 1338
Aor51HI AGCGCT 1 cut(s) 1301
AoxI GGCC 4 cut(s) 409, 451, 956, 1185
ApeKI GCWGC 5 cut(s) 909, 1164, 1307, 1310, 1320
ApoI RAATTY 1 cut(s) 740
ArsI GACNNNNNNTTYG 2 cut(s) 854, 886
AspLEI GCGC 4 cut(s) 418, 953, 1123, 1302
AspS9I GGNCC 3 cut(s) 257, 409, 956
AsuC2I CCSGG 1 cut(s) 1276
AsuHPI GGTGA 4 cut(s) 236, 368, 1101, 1223
AvaI CYCGRG 1 cut(s) 1015
AvaII GGWCC 1 cut(s) 257
AxyI CCTNAGG 2 cut(s) 1051, 1207
BalI TGGCCA 1 cut(s) 1187
BanII GRGCYC 1 cut(s) 1353
BarI GAAGNNNNNNTAC 2 cut(s) 656, 688
BbsI GAAGAC 2 cut(s) 134, 798
Bbv12I GWGCWC 1 cut(s) 1353
BbvI GCAGC 5 cut(s) 921, 1176, 1297, 1319, 1332
BccI CCATC 4 cut(s) 774, 915, 967, 1276
BciT130I CCWGG 1 cut(s) 637
BciVI GTATCC 1 cut(s) 757
BclI TGATCA 1 cut(s) 1213
BcnI CCSGG 1 cut(s) 1276
BcoDI GTCTC 2 cut(s) 825, 1255
BfaI CTAG 3 cut(s) 413, 915, 1059
BfmI CTRYAG 2 cut(s) 708, 1305
BfoI RGCGCY 1 cut(s) 1303
BfrI CTTAAG 1 cut(s) 619
BfuI GTATCC 1 cut(s) 757
BglII AGATCT 1 cut(s) 725
BisI GCNGC 6 cut(s) 910, 1165, 1264, 1308, 1311, 1321
BlsI GCNGC 6 cut(s) 911, 1166, 1265, 1309, 1312, 1322
Bme1390I CCNGG 2 cut(s) 637, 1276
Bme18I GGWCC 1 cut(s) 257
BmeT110I CYCGRG 1 cut(s) 1015
BmgBI CACGTC 1 cut(s) 1067
BmgT120I GGNCC 3 cut(s) 257, 409, 956
BmiI GGNNCC 2 cut(s) 120, 259
BmrFI CCNGG 2 cut(s) 637, 1276
BmrI ACTGGG 2 cut(s) 255, 1218
BmsI GCATC 3 cut(s) 145, 309, 1108
BmuI ACTGGG 2 cut(s) 255, 1218
BpiI GAAGAC 2 cut(s) 134, 798
BpuEI CTTGAG 2 cut(s) 188, 1237
BpuMI CCSGG 1 cut(s) 1276
Bsa29I ATCGAT 2 cut(s) 775, 1009
BsaJI CCNNGG 2 cut(s) 556, 635
BsaWI WCCGGW 1 cut(s) 1338
Bsc4I CCNNNNNNNGG 5 cut(s) 641, 902, 980, 1229, 1274
Bse1I ACTGG 5 cut(s) 193, 261, 881, 930, 1224
Bse21I CCTNAGG 2 cut(s) 1051, 1207
Bse3DI GCAATG 1 cut(s) 779
BseAI TCCGGA 1 cut(s) 1338
BseBI CCWGG 1 cut(s) 637
BseCI ATCGAT 2 cut(s) 775, 1009
BseDI CCNNGG 2 cut(s) 556, 635
BseGI GGATG 3 cut(s) 136, 730, 926
BseLI CCNNNNNNNGG 5 cut(s) 641, 902, 980, 1229, 1274
BseMI GCAATG 1 cut(s) 779
BseMII CTCAG 3 cut(s) 911, 1065, 1221
BseNI ACTGG 5 cut(s) 193, 261, 881, 930, 1224
BseRI GAGGAG 2 cut(s) 113, 1195
BseXI GCAGC 5 cut(s) 921, 1176, 1297, 1319, 1332
BseYI CCCAGC 2 cut(s) 31, 141
BsgI GTGCAG 2 cut(s) 742, 1041
Bsh1236I CGCG 1 cut(s) 418
Bsh1285I CGRYCG 1 cut(s) 1234
BshFI GGCC 4 cut(s) 411, 453, 958, 1187
BshVI ATCGAT 2 cut(s) 775, 1009
BsiEI CGRYCG 1 cut(s) 1234
BsiHKAI GWGCWC 1 cut(s) 1353
BsiHKCI CYCGRG 1 cut(s) 1015
BsiSI CCGG 2 cut(s) 1275, 1339
BslFI GGGAC 1 cut(s) 1155
BslI CCNNNNNNNGG 5 cut(s) 641, 902, 980, 1229, 1274
BsmAI GTCTC 2 cut(s) 825, 1255
BsmFI GGGAC 1 cut(s) 1155
BsnI GGCC 4 cut(s) 411, 453, 958, 1187
BsoBI CYCGRG 1 cut(s) 1015
Bsp1286I GDGCHC 1 cut(s) 1353
Bsp13I TCCGGA 1 cut(s) 1338
Bsp1407I TGTACA 1 cut(s) 85
BspACI CCGC 4 cut(s) 17, 784, 941, 1264
BspANI GGCC 4 cut(s) 411, 453, 958, 1187
BspCNI CTCAG 3 cut(s) 910, 1064, 1220
BspDI ATCGAT 2 cut(s) 775, 1009
BspEI TCCGGA 1 cut(s) 1338
BspFNI CGCG 1 cut(s) 418
BspHI TCATGA 1 cut(s) 769
BspLI GGNNCC 2 cut(s) 120, 259
BspMAI CTGCAG 1 cut(s) 1309
BspPI GGATC 4 cut(s) 480, 991, 1080, 1325
BspTI CTTAAG 1 cut(s) 619
BsrDI GCAATG 1 cut(s) 779
BsrGI TGTACA 1 cut(s) 85
BsrI ACTGG 5 cut(s) 193, 261, 881, 930, 1224
BssECI CCNNGG 2 cut(s) 556, 635
BssT1I CCWWGG 1 cut(s) 556
Bst2UI CCWGG 1 cut(s) 637
Bst4CI ACNGT 5 cut(s) 313, 380, 498, 883, 1232
Bst6I CTCTTC 1 cut(s) 571
BstAFI CTTAAG 1 cut(s) 619
BstAUI TGTACA 1 cut(s) 85
BstC8I GCNNGC 4 cut(s) 324, 532, 927, 1189
BstDEI CTNAG 3 cut(s) 897, 1051, 1207
BstENI CCTNNNNNAGG 1 cut(s) 978
BstF5I GGATG 3 cut(s) 136, 730, 926
BstFNI CGCG 1 cut(s) 418
BstH2I RGCGCY 1 cut(s) 1303
BstHHI GCGC 4 cut(s) 418, 953, 1123, 1302
BstMAI GTCTC 2 cut(s) 825, 1255
BstMCI CGRYCG 1 cut(s) 1234
BstMWI GCNNNNNNNGC 5 cut(s) 142, 422, 536, 1028, 1263
BstNI CCWGG 1 cut(s) 637
BstNSI RCATGY 3 cut(s) 11, 358, 929
BstSCI CCNGG 2 cut(s) 635, 1274
BstSFI CTRYAG 2 cut(s) 708, 1305
BstUI CGCG 1 cut(s) 418
BstV1I GCAGC 5 cut(s) 921, 1176, 1297, 1319, 1332
BstV2I GAAGAC 2 cut(s) 134, 798
BstX2I RGATCY 2 cut(s) 472, 725
BstYI RGATCY 2 cut(s) 472, 725
Bsu15I ATCGAT 2 cut(s) 775, 1009
Bsu36I CCTNAGG 2 cut(s) 1051, 1207
BsuI GTATCC 1 cut(s) 757
BsuRI GGCC 4 cut(s) 411, 453, 958, 1187
BsuTUI ATCGAT 2 cut(s) 775, 1009
BtrI CACGTC 1 cut(s) 1067
BtsCI GGATG 3 cut(s) 136, 730, 926
BtsIMutI CAGTG 4 cut(s) 318, 691, 937, 1231
Cac8I GCNNGC 4 cut(s) 324, 532, 927, 1189
CaiI CAGNNNCTG 1 cut(s) 527
CciI TCATGA 1 cut(s) 769
CfoI GCGC 4 cut(s) 418, 953, 1123, 1302
Cfr13I GGNCC 3 cut(s) 257, 409, 956
ClaI ATCGAT 2 cut(s) 775, 1009
CseI GACGC 1 cut(s) 1152
Csp6I GTAC 5 cut(s) 86, 499, 657, 673, 1103
CviAII CATG 6 cut(s) 8, 238, 355, 770, 926, 1127
CviQI GTAC 5 cut(s) 86, 499, 657, 673, 1103
DdeI CTNAG 3 cut(s) 897, 1051, 1207
DraI TTTAAA 2 cut(s) 648, 816
EaeI YGGCCR 1 cut(s) 1185
Eam1104I CTCTTC 1 cut(s) 571
EarI CTCTTC 1 cut(s) 571
Ecl136II GAGCTC 1 cut(s) 1351
Eco130I CCWWGG 1 cut(s) 556
Eco24I GRGCYC 1 cut(s) 1353
Eco47I GGWCC 1 cut(s) 257
Eco47III AGCGCT 1 cut(s) 1301
Eco53kI GAGCTC 1 cut(s) 1351
Eco57I CTGAAG 1 cut(s) 461
Eco81I CCTNAGG 2 cut(s) 1051, 1207
Eco88I CYCGRG 1 cut(s) 1015
EcoICRI GAGCTC 1 cut(s) 1351
EcoNI CCTNNNNNAGG 1 cut(s) 978
EcoRII CCWGG 1 cut(s) 635
EcoT14I CCWWGG 1 cut(s) 556
EcoT38I GRGCYC 1 cut(s) 1353
ErhI CCWWGG 1 cut(s) 556
FaeI CATG 6 cut(s) 11, 241, 358, 773, 929, 1130
FaqI GGGAC 1 cut(s) 1155
FatI CATG 6 cut(s) 7, 237, 354, 769, 925, 1126
FauI CCCGC 2 cut(s) 10, 934
FbaI TGATCA 1 cut(s) 1213
Fnu4HI GCNGC 6 cut(s) 910, 1165, 1264, 1308, 1311, 1321
FokI GGATG 3 cut(s) 123, 717, 933
FriOI GRGCYC 1 cut(s) 1353
Fsp4HI GCNGC 6 cut(s) 910, 1165, 1264, 1308, 1311, 1321
FspAI RTGCGCAY 1 cut(s) 1122
FspBI CTAG 3 cut(s) 413, 915, 1059
FspI TGCGCA 1 cut(s) 1122
GlaI GCGC 4 cut(s) 417, 952, 1122, 1301
GluI GCNGC 6 cut(s) 910, 1165, 1264, 1308, 1311, 1321
GsaI CCCAGC 2 cut(s) 35, 145
HaeII RGCGCY 1 cut(s) 1303
HaeIII GGCC 4 cut(s) 411, 453, 958, 1187
HapII CCGG 2 cut(s) 1275, 1339
HgaI GACGC 1 cut(s) 1152
HhaI GCGC 4 cut(s) 418, 953, 1123, 1302
Hin1II CATG 6 cut(s) 11, 241, 358, 773, 929, 1130
Hin6I GCGC 4 cut(s) 416, 951, 1121, 1300
HinP1I GCGC 4 cut(s) 416, 951, 1121, 1300
HincII GTYRAC 1 cut(s) 547
HindII GTYRAC 1 cut(s) 547
HinfI GANTC 6 cut(s) 155, 481, 590, 1000, 1011, 1130
HpaI GTTAAC 1 cut(s) 547
HpaII CCGG 2 cut(s) 1275, 1339
HphI GGTGA 4 cut(s) 236, 368, 1101, 1223
Hpy166II GTNNAC 3 cut(s) 300, 547, 1064
Hpy188I TCNGA 5 cut(s) 62, 480, 830, 900, 1135
Hpy188III TCNNGA 8 cut(s) 770, 845, 915, 1004, 1070, 1173, 1339, 1363
Hpy8I GTNNAC 3 cut(s) 300, 547, 1064
HpyAV CCTTC 4 cut(s) 260, 641, 842, 1116
HpyCH4III ACNGT 5 cut(s) 313, 380, 498, 883, 1232
HpyCH4IV ACGT 1 cut(s) 1066
HpyCH4V TGCA 9 cut(s) 288, 326, 358, 458, 539, 723, 1022, 1307, 1313
HpyF10VI GCNNNNNNNGC 5 cut(s) 142, 422, 536, 1028, 1263
HpyF3I CTNAG 3 cut(s) 897, 1051, 1207
HpySE526I ACGT 1 cut(s) 1066
Hsp92II CATG 6 cut(s) 11, 241, 358, 773, 929, 1130
HspAI GCGC 4 cut(s) 416, 951, 1121, 1300
Kpn2I TCCGGA 1 cut(s) 1338
Ksp22I TGATCA 1 cut(s) 1213
KspAI GTTAAC 1 cut(s) 547
LmnI GCTCC 4 cut(s) 4, 1208, 1341, 1356
Lsp1109I GCAGC 5 cut(s) 921, 1176, 1297, 1319, 1332
LweI GCATC 3 cut(s) 145, 309, 1108
MaeI CTAG 3 cut(s) 413, 915, 1059
MaeII ACGT 1 cut(s) 1066
MaeIII GTNAC 3 cut(s) 224, 1226, 1286
MboII GAAGA 8 cut(s) 52, 139, 167, 281, 365, 467, 588, 803
MfeI CAATTG 1 cut(s) 332
MflI RGATCY 2 cut(s) 472, 725
MhlI GDGCHC 1 cut(s) 1353
MlsI TGGCCA 1 cut(s) 1187
MluCI AATT 6 cut(s) 161, 332, 561, 740, 857, 1147
MluNI TGGCCA 1 cut(s) 1187
MlyI GAGTC 2 cut(s) 164, 475
Mox20I TGGCCA 1 cut(s) 1187
MroI TCCGGA 1 cut(s) 1338
MscI TGGCCA 1 cut(s) 1187
MseI TTAA 9 cut(s) 27, 111, 305, 339, 546, 620, 647, 815, 947
MslI CAYNNNNRTG 1 cut(s) 930
Msp20I TGGCCA 1 cut(s) 1187
MspA1I CMGCKG 2 cut(s) 737, 1310
MspCI CTTAAG 1 cut(s) 619
MspI CCGG 2 cut(s) 1275, 1339
MspR9I CCNGG 2 cut(s) 637, 1276
MunI CAATTG 1 cut(s) 332
MvaI CCWGG 1 cut(s) 637
MvnI CGCG 1 cut(s) 418
MwoI GCNNNNNNNGC 5 cut(s) 142, 422, 536, 1028, 1263
NciI CCSGG 1 cut(s) 1276
NlaIII CATG 6 cut(s) 11, 241, 358, 773, 929, 1130
NlaIV GGNNCC 2 cut(s) 120, 259
NmeAIII GCCGAG 1 cut(s) 1349
NmuCI GTSAC 2 cut(s) 224, 1226
NsbI TGCGCA 1 cut(s) 1122
NspI RCATGY 3 cut(s) 11, 358, 929
PaeI GCATGC 1 cut(s) 929
PagI TCATGA 1 cut(s) 769
PfeI GAWTC 4 cut(s) 590, 1000, 1011, 1130
PkrI GCNGC 6 cut(s) 911, 1166, 1265, 1309, 1312, 1322
PleI GAGTC 2 cut(s) 163, 475
PpsI GAGTC 2 cut(s) 163, 475
Psp124BI GAGCTC 1 cut(s) 1353
Psp6I CCWGG 1 cut(s) 635
PspFI CCCAGC 2 cut(s) 31, 141
PspGI CCWGG 1 cut(s) 635
PspN4I GGNNCC 2 cut(s) 120, 259
PspPI GGNCC 3 cut(s) 257, 409, 956
PsrI GAACNNNNNNTAC 2 cut(s) 1271, 1303
PstI CTGCAG 1 cut(s) 1309
PstNI CAGNNNCTG 1 cut(s) 527
PsuI RGATCY 2 cut(s) 472, 725
PvuII CAGCTG 2 cut(s) 737, 1310
RsaI GTAC 5 cut(s) 87, 500, 658, 674, 1104
RsaNI GTAC 5 cut(s) 86, 499, 657, 673, 1103
RseI CAYNNNNRTG 1 cut(s) 930
SacI GAGCTC 1 cut(s) 1353
SaqAI TTAA 9 cut(s) 27, 111, 305, 339, 546, 620, 647, 815, 947
SatI GCNGC 6 cut(s) 910, 1165, 1264, 1308, 1311, 1321
Sau96I GGNCC 3 cut(s) 257, 409, 956
SchI GAGTC 2 cut(s) 164, 475
ScrFI CCNGG 2 cut(s) 637, 1276
SduI GDGCHC 1 cut(s) 1353
SfaNI GCATC 3 cut(s) 145, 309, 1108
SfcI CTRYAG 2 cut(s) 708, 1305
SinI GGWCC 1 cut(s) 257
SmiMI CAYNNNNRTG 1 cut(s) 930
SmlI CTYRAG 3 cut(s) 203, 619, 1252
SmoI CTYRAG 3 cut(s) 203, 619, 1252
SphI GCATGC 1 cut(s) 929
Sse9I AATT 6 cut(s) 161, 332, 561, 740, 857, 1147
SsiI CCGC 4 cut(s) 17, 784, 941, 1264
SspMI CTAG 3 cut(s) 413, 915, 1059
SstI GAGCTC 1 cut(s) 1353
StyD4I CCNGG 2 cut(s) 635, 1274
StyI CCWWGG 1 cut(s) 556
TaaI ACNGT 5 cut(s) 313, 380, 498, 883, 1232
TaiI ACGT 1 cut(s) 1069
TaqI TCGA 4 cut(s) 775, 844, 1003, 1009
TasI AATT 6 cut(s) 161, 332, 561, 740, 857, 1147
TatI WGTACW 1 cut(s) 85
TauI GCSGC 1 cut(s) 1266
TfiI GAWTC 4 cut(s) 590, 1000, 1011, 1130
Tru1I TTAA 9 cut(s) 27, 111, 305, 339, 546, 620, 647, 815, 947
Tru9I TTAA 9 cut(s) 27, 111, 305, 339, 546, 620, 647, 815, 947
TscAI CASTG 4 cut(s) 318, 691, 937, 1231
TseFI GTSAC 2 cut(s) 224, 1226
TseI GCWGC 5 cut(s) 909, 1164, 1307, 1310, 1320
Tsp45I GTSAC 2 cut(s) 224, 1226
TspDTI ATGAA 2 cut(s) 137, 746
TspRI CASTG 4 cut(s) 318, 691, 937, 1231
Vha464I CTTAAG 1 cut(s) 619
VpaK11BI GGWCC 1 cut(s) 257
XagI CCTNNNNNAGG 1 cut(s) 978
XapI RAATTY 1 cut(s) 740
XbaI TCTAGA 1 cut(s) 914
XceI RCATGY 3 cut(s) 11, 358, 929
XspI CTAG 3 cut(s) 413, 915, 1059
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.