FvH4_2g21160
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
17614005 .. 17619933
5929 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g21160.t1

Sequence Viewer

Length: 1365 bp
ATGGAGCATGTGATTGCTGGCAAGTTTAAGCTTGGGAGGAAGATTGGGAGTGGTTCTTTCGGGGAGCTCTATCTAGGTGTCAATGTACAAACCGGGGAGGAGGTTGCTGTGAAGCTGGAACCTGTGAAGACCAAGCATCCCCAGCTTCACTATGAATCCAAATTGTACATGCTTCTTCAAGGAGGAACGGGAATCCCCCACCTGAAGTGGTTTGGAGTTGAGGGTGACTACAATGTCATGGTTATTGATCTTCTTGGACCAAGTTTGGAAGATTTGTTCAACTATTGTAATAGGAAGTTTACATTGAAAACAGTTTTGATGCTTGCAGATCAATTAATTAACAGAGTTGAATACATGCACTCAAGAGGTTTCCTTCATCGCGATATAAAACCTGACAACTTTTTGATGGGCCTAGGGCGTAAAGCCAATCAGGTATATGCTATTGATTATGGCCTTGCAAAGAAGTATAGGGATCTCCAGACTCACAAGCACATAGCTTATAGGGAGAACAAGAACCTCACAGGCACTGCCCGCTATGCAAGCGTGAACACTCATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCACTTGGTTATGTGCTTATGTATTTCTTACGAGGAAGCCTTCCCTGGCAAGGACTGAAAGCTGGCACAAAAAAGCAAAAATACGATAAAATCAGTGAAAAGAAAATGTCAACTCCTATAGAGGTGCTTTGCAGATCACATCCATCTGAATTTGTATCCTACTTTCACTACTGCCGAGCATTGCGGTTTGAAGACAAGCCAGATTATTCATACCTGAAGAGGCTCTTTCGAGACTTATTTATTAGAGAAGGTTATCAATTTGACTATGTATTTGACTGGACTGTCCTGAAGTACCCCCAGATTGGTGGAAGCTCTAGAGGATGGCATGCCAGTGGGAAAGCAGGTGCAAATGCAGGACCATCTGGGGAAAGACCTGAAAGAGTCTCAGTTGGGAAAGAGATTCGAGAAAAATTCTCAGGTGCAGTTGAAGCATTTTCGAGGAGAAATACCTCAGGTTCTAGTCCACGAGATCACTACAAACACAGGTCTATTGATGATGGACCTCCATCCAAAGACACGCCCTATGATTCTGAGAGGGGACGCAATTCCTCCCGATATGGTAGCACTTCAAGGAAGGCTGTGGCCAGCAGTAAGCCAAGTTCCTCAGGTGAGCCCAGTGAAGGTCGCACAAGCCGATTACTCTCAAACAGTAGCCGCCCGTCTACTGGGCACAACCGAGTTCAATCTGGGCATGAATCAAAGCGCCCTGTTGCTACTAGAGGGAACCGTGATGATCCTCTCCGTAGCTTTGAGCTCCTCTCAATCAGGAAGTAA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

455

Amino Acids

51.55

Weight (kDa)

9.72

Isoelectric Point (pI)

47.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 10 - 227 4.6e-25 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 10 - 270 2.5e-13 Protein tyrosine and serine/threonine kinase
Pkinase_fungal PF17667 118 - 206 1.1e-07 Fungal protein kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 923
AasI GACNNNNNNGTC 2 cut(s) 233, 872
Acc36I ACCTGC 1 cut(s) 923
AccI GTMKAC 1 cut(s) 1253
AccII CGCG 1 cut(s) 381
AciI CCGC 3 cut(s) 532, 775, 1246
AclWI GGATC 2 cut(s) 480, 1319
AcoI YGGCCR 1 cut(s) 1173
AcsI RAATTY 2 cut(s) 740, 1001
AcuI CTGAAG 3 cut(s) 224, 827, 899
AfaI GTAC 3 cut(s) 87, 167, 884
AfiI CCNNNNNNNGG 4 cut(s) 641, 893, 1211, 1256
AgsI TTSAA 9 cut(s) 179, 280, 307, 350, 566, 782, 1019, 1161, 1274
AjnI CCWGG 1 cut(s) 635
AloI GAACNNNNNNTCC 2 cut(s) 260, 292
AluBI AGCT 9 cut(s) 31, 67, 115, 145, 497, 653, 903, 1338, 1345
AluI AGCT 9 cut(s) 31, 67, 115, 145, 497, 653, 903, 1338, 1345
Alw21I GWGCWC 2 cut(s) 69, 1347
Alw26I GTCTC 2 cut(s) 816, 979
AlwI GGATC 2 cut(s) 480, 1319
AlwNI CAGNNNCTG 1 cut(s) 527
AoxI GGCC 3 cut(s) 409, 451, 1173
ApoI RAATTY 2 cut(s) 740, 1001
ArsI GACNNNNNNTTYG 2 cut(s) 845, 877
AseI ATTAAT 1 cut(s) 335
AspA2I CCTAGG 1 cut(s) 412
AspLEI GCGC 1 cut(s) 1296
AspS9I GGNCC 4 cut(s) 257, 409, 947, 1091
AsuC2I CCSGG 1 cut(s) 94
AsuHPI GGTGA 2 cut(s) 236, 1211
AvaII GGWCC 3 cut(s) 257, 947, 1091
AvrII CCTAGG 1 cut(s) 412
AxyI CCTNAGG 2 cut(s) 1042, 1195
BaeGI GKGCMC 1 cut(s) 1263
BalI TGGCCA 1 cut(s) 1175
BanII GRGCYC 3 cut(s) 69, 1206, 1347
BauI CACGAG 1 cut(s) 1056
BbsI GAAGAC 2 cut(s) 134, 789
Bbv12I GWGCWC 2 cut(s) 69, 1347
BccI CCATC 6 cut(s) 400, 742, 906, 958, 1082, 1105
BciT130I CCWGG 1 cut(s) 637
BciVI GTATCC 1 cut(s) 757
BcnI CCSGG 1 cut(s) 94
BcoDI GTCTC 2 cut(s) 816, 979
BfaI CTAG 5 cut(s) 74, 413, 906, 1050, 1308
BfmI CTRYAG 1 cut(s) 708
BfoI RGCGCY 1 cut(s) 1297
BfuAI ACCTGC 1 cut(s) 923
BfuI GTATCC 1 cut(s) 757
BisI GCNGC 1 cut(s) 1246
BlnI CCTAGG 1 cut(s) 412
BlsI GCNGC 1 cut(s) 1247
Bme1390I CCNGG 2 cut(s) 94, 637
Bme18I GGWCC 3 cut(s) 257, 947, 1091
BmgT120I GGNCC 4 cut(s) 257, 409, 947, 1091
BmiI GGNNCC 2 cut(s) 120, 1316
BmrFI CCNGG 2 cut(s) 94, 637
BmrI ACTGGG 2 cut(s) 1200, 1266
BmsI GCATC 2 cut(s) 145, 309
BmuI ACTGGG 2 cut(s) 1200, 1266
BpiI GAAGAC 2 cut(s) 134, 789
BplI GAGNNNNNCTC 1 cut(s) 1334
BpmI CTGGAG 1 cut(s) 461
BpuEI CTTGAG 1 cut(s) 346
BpuMI CCSGG 1 cut(s) 94
BsaJI CCNNGG 3 cut(s) 93, 412, 635
Bsc4I CCNNNNNNNGG 4 cut(s) 641, 893, 1211, 1256
Bse1I ACTGG 4 cut(s) 872, 921, 1206, 1261
Bse21I CCTNAGG 2 cut(s) 1042, 1195
Bse3DI GCAATG 1 cut(s) 770
BseBI CCWGG 1 cut(s) 637
BseDI CCNNGG 3 cut(s) 93, 412, 635
BseGI GGATG 5 cut(s) 136, 586, 730, 917, 1097
BseLI CCNNNNNNNGG 4 cut(s) 641, 893, 1211, 1256
BseMI GCAATG 1 cut(s) 770
BseMII CTCAG 5 cut(s) 990, 1020, 1056, 1113, 1209
BseNI ACTGG 4 cut(s) 872, 921, 1206, 1261
BseRI GAGGAG 3 cut(s) 113, 1045, 1337
BseSI GKGCMC 1 cut(s) 1263
BseYI CCCAGC 1 cut(s) 141
BsgI GTGCAG 1 cut(s) 1032
Bsh1236I CGCG 1 cut(s) 381
BshFI GGCC 3 cut(s) 411, 453, 1175
BsiHKAI GWGCWC 2 cut(s) 69, 1347
BsiSI CCGG 1 cut(s) 93
BslFI GGGAC 1 cut(s) 1143
BslI CCNNNNNNNGG 4 cut(s) 641, 893, 1211, 1256
BsmAI GTCTC 2 cut(s) 816, 979
BsmFI GGGAC 1 cut(s) 1143
BsnI GGCC 3 cut(s) 411, 453, 1175
Bsp1286I GDGCHC 4 cut(s) 69, 1206, 1263, 1347
Bsp1407I TGTACA 2 cut(s) 85, 165
Bsp143I GATC 7 cut(s) 247, 328, 472, 583, 725, 1060, 1324
Bsp68I TCGCGA 1 cut(s) 381
BspACI CCGC 3 cut(s) 532, 775, 1246
BspANI GGCC 3 cut(s) 411, 453, 1175
BspCNI CTCAG 5 cut(s) 989, 1019, 1055, 1114, 1208
BspFNI CGCG 1 cut(s) 381
BspLI GGNNCC 2 cut(s) 120, 1316
BspMI ACCTGC 1 cut(s) 923
BspPI GGATC 2 cut(s) 480, 1319
BsrDI GCAATG 1 cut(s) 770
BsrGI TGTACA 2 cut(s) 85, 165
BsrI ACTGG 4 cut(s) 872, 921, 1206, 1261
BssECI CCNNGG 3 cut(s) 93, 412, 635
BssMI GATC 7 cut(s) 247, 328, 472, 583, 725, 1060, 1324
BssSI CACGAG 1 cut(s) 1056
BssT1I CCWWGG 1 cut(s) 412
Bst2BI CACGAG 1 cut(s) 1056
Bst2UI CCWGG 1 cut(s) 637
Bst4CI ACNGT 4 cut(s) 313, 874, 1241, 1319
Bst6I CTCTTC 1 cut(s) 803
BstAUI TGTACA 2 cut(s) 85, 165
BstC8I GCNNGC 7 cut(s) 19, 324, 532, 541, 655, 918, 1177
BstDEI CTNAG 5 cut(s) 976, 1006, 1042, 1122, 1195
BstF5I GGATG 5 cut(s) 136, 586, 730, 917, 1097
BstFNI CGCG 1 cut(s) 381
BstH2I RGCGCY 1 cut(s) 1297
BstHHI GCGC 1 cut(s) 1296
BstKTI GATC 7 cut(s) 250, 331, 475, 586, 728, 1063, 1327
BstMAI GTCTC 2 cut(s) 816, 979
BstMBI GATC 7 cut(s) 247, 328, 472, 583, 725, 1060, 1324
BstMWI GCNNNNNNNGC 5 cut(s) 142, 531, 536, 540, 1019
BstNI CCWGG 1 cut(s) 637
BstNSI RCATGY 4 cut(s) 11, 172, 358, 920
BstSCI CCNGG 2 cut(s) 92, 635
BstSFI CTRYAG 1 cut(s) 708
BstSLI GKGCMC 1 cut(s) 1263
BstUI CGCG 1 cut(s) 381
BstV2I GAAGAC 2 cut(s) 134, 789
BstX2I RGATCY 1 cut(s) 472
BstXI CCANNNNNNTGG 1 cut(s) 896
BstYI RGATCY 1 cut(s) 472
Bsu36I CCTNAGG 2 cut(s) 1042, 1195
BsuI GTATCC 1 cut(s) 757
BsuRI GGCC 3 cut(s) 411, 453, 1175
BtgZI GCGATG 1 cut(s) 362
BtsCI GGATG 5 cut(s) 136, 586, 730, 917, 1097
BtsI GCAGTG 1 cut(s) 525
BtsIMutI CAGTG 4 cut(s) 525, 691, 928, 1213
BtuMI TCGCGA 1 cut(s) 381
BveI ACCTGC 1 cut(s) 923
Cac8I GCNNGC 7 cut(s) 19, 324, 532, 541, 655, 918, 1177
CaiI CAGNNNCTG 1 cut(s) 527
CfoI GCGC 1 cut(s) 1296
Cfr13I GGNCC 4 cut(s) 257, 409, 947, 1091
CseI GACGC 1 cut(s) 1140
Csp6I GTAC 3 cut(s) 86, 166, 883
CviAII CATG 6 cut(s) 8, 169, 238, 355, 917, 1283
CviQI GTAC 3 cut(s) 86, 166, 883
DdeI CTNAG 5 cut(s) 976, 1006, 1042, 1122, 1195
DpnI GATC 7 cut(s) 249, 330, 474, 585, 727, 1062, 1326
DpnII GATC 7 cut(s) 247, 328, 472, 583, 725, 1060, 1324
DrdI GACNNNNNNGTC 2 cut(s) 233, 872
DseDI GACNNNNNNGTC 2 cut(s) 233, 872
EaeI YGGCCR 1 cut(s) 1173
Eam1104I CTCTTC 1 cut(s) 803
EarI CTCTTC 1 cut(s) 803
Ecl136II GAGCTC 2 cut(s) 67, 1345
Eco130I CCWWGG 1 cut(s) 412
Eco24I GRGCYC 3 cut(s) 69, 1206, 1347
Eco47I GGWCC 3 cut(s) 257, 947, 1091
Eco53kI GAGCTC 2 cut(s) 67, 1345
Eco57I CTGAAG 3 cut(s) 224, 827, 899
Eco81I CCTNAGG 2 cut(s) 1042, 1195
EcoICRI GAGCTC 2 cut(s) 67, 1345
EcoRII CCWGG 1 cut(s) 635
EcoT14I CCWWGG 1 cut(s) 412
EcoT38I GRGCYC 3 cut(s) 69, 1206, 1347
ErhI CCWWGG 1 cut(s) 412
FaeI CATG 6 cut(s) 11, 172, 241, 358, 920, 1286
FalI AAGNNNNNCTT 2 cut(s) 800, 832
FaqI GGGAC 1 cut(s) 1143
FatI CATG 6 cut(s) 7, 168, 237, 354, 916, 1282
FauI CCCGC 1 cut(s) 539
FblI GTMKAC 1 cut(s) 1253
Fnu4HI GCNGC 1 cut(s) 1246
FokI GGATG 5 cut(s) 123, 593, 717, 924, 1084
FriOI GRGCYC 3 cut(s) 69, 1206, 1347
Fsp4HI GCNGC 1 cut(s) 1246
FspBI CTAG 5 cut(s) 74, 413, 906, 1050, 1308
GlaI GCGC 1 cut(s) 1295
GluI GCNGC 1 cut(s) 1246
GsaI CCCAGC 1 cut(s) 145
GsuI CTGGAG 1 cut(s) 461
HaeII RGCGCY 1 cut(s) 1297
HaeIII GGCC 3 cut(s) 411, 453, 1175
HapII CCGG 1 cut(s) 93
HgaI GACGC 1 cut(s) 1140
HhaI GCGC 1 cut(s) 1296
Hin1II CATG 6 cut(s) 11, 172, 241, 358, 920, 1286
Hin6I GCGC 1 cut(s) 1294
HinP1I GCGC 1 cut(s) 1294
HincII GTYRAC 1 cut(s) 702
HindII GTYRAC 1 cut(s) 702
HindIII AAGCTT 1 cut(s) 29
HinfI GANTC 8 cut(s) 155, 192, 481, 590, 972, 991, 1118, 1286
HpaII CCGG 1 cut(s) 93
HphI GGTGA 2 cut(s) 236, 1211
Hpy166II GTNNAC 5 cut(s) 300, 547, 702, 1055, 1254
Hpy188I TCNGA 2 cut(s) 739, 1123
Hpy8I GTNNAC 5 cut(s) 300, 547, 702, 1055, 1254
HpyAV CCTTC 6 cut(s) 383, 570, 641, 833, 1159, 1205
HpyCH4III ACNGT 4 cut(s) 313, 874, 1241, 1319
HpyCH4V TGCA 8 cut(s) 326, 358, 458, 539, 723, 938, 944, 1013
HpyF10VI GCNNNNNNNGC 5 cut(s) 142, 531, 536, 540, 1019
HpyF3I CTNAG 5 cut(s) 976, 1006, 1042, 1122, 1195
Hsp92II CATG 6 cut(s) 11, 172, 241, 358, 920, 1286
HspAI GCGC 1 cut(s) 1294
Kzo9I GATC 7 cut(s) 247, 328, 472, 583, 725, 1060, 1324
LmnI GCTCC 3 cut(s) 4, 64, 1350
LweI GCATC 2 cut(s) 145, 309
MaeI CTAG 5 cut(s) 74, 413, 906, 1050, 1308
MaeIII GTNAC 1 cut(s) 224
MalI GATC 7 cut(s) 249, 330, 474, 585, 727, 1062, 1326
MboI GATC 7 cut(s) 247, 328, 472, 583, 725, 1060, 1324
MboII GAAGA 7 cut(s) 52, 139, 167, 242, 281, 794, 820
MflI RGATCY 1 cut(s) 472
MhlI GDGCHC 4 cut(s) 69, 1206, 1263, 1347
MlsI TGGCCA 1 cut(s) 1175
MluCI AATT 8 cut(s) 161, 332, 336, 561, 740, 848, 1001, 1135
MluNI TGGCCA 1 cut(s) 1175
MlyI GAGTC 2 cut(s) 475, 981
Mox20I TGGCCA 1 cut(s) 1175
MscI TGGCCA 1 cut(s) 1175
MseI TTAA 3 cut(s) 27, 335, 339
MslI CAYNNNNRTG 1 cut(s) 921
Msp20I TGGCCA 1 cut(s) 1175
MspI CCGG 1 cut(s) 93
MspR9I CCNGG 2 cut(s) 94, 637
MvaI CCWGG 1 cut(s) 637
MvnI CGCG 1 cut(s) 381
MwoI GCNNNNNNNGC 5 cut(s) 142, 531, 536, 540, 1019
NciI CCSGG 1 cut(s) 94
NdeII GATC 7 cut(s) 247, 328, 472, 583, 725, 1060, 1324
NlaIII CATG 6 cut(s) 11, 172, 241, 358, 920, 1286
NlaIV GGNNCC 2 cut(s) 120, 1316
NmeAIII GCCGAG 1 cut(s) 791
NmuCI GTSAC 1 cut(s) 224
NruI TCGCGA 1 cut(s) 381
NspI RCATGY 4 cut(s) 11, 172, 358, 920
PacI TTAATTAA 1 cut(s) 339
PaeI GCATGC 1 cut(s) 920
PaqCI CACCTGC 1 cut(s) 923
PcsI WCGNNNNNNNCGW 1 cut(s) 1222
PfeI GAWTC 6 cut(s) 155, 192, 590, 991, 1118, 1286
PkrI GCNGC 1 cut(s) 1247
PleI GAGTC 2 cut(s) 475, 980
PpsI GAGTC 2 cut(s) 475, 980
PshBI ATTAAT 1 cut(s) 335
Psp124BI GAGCTC 2 cut(s) 69, 1347
Psp6I CCWGG 1 cut(s) 635
PspFI CCCAGC 1 cut(s) 141
PspGI CCWGG 1 cut(s) 635
PspN4I GGNNCC 2 cut(s) 120, 1316
PspPI GGNCC 4 cut(s) 257, 409, 947, 1091
PsrI GAACNNNNNNTAC 2 cut(s) 1174, 1206
PstNI CAGNNNCTG 1 cut(s) 527
PsuI RGATCY 1 cut(s) 472
RruI TCGCGA 1 cut(s) 381
RsaI GTAC 3 cut(s) 87, 167, 884
RsaNI GTAC 3 cut(s) 86, 166, 883
RseI CAYNNNNRTG 1 cut(s) 921
SacI GAGCTC 2 cut(s) 69, 1347
SaqAI TTAA 3 cut(s) 27, 335, 339
SatI GCNGC 1 cut(s) 1246
Sau3AI GATC 7 cut(s) 247, 328, 472, 583, 725, 1060, 1324
Sau96I GGNCC 4 cut(s) 257, 409, 947, 1091
SchI GAGTC 2 cut(s) 475, 981
ScrFI CCNGG 2 cut(s) 94, 637
SduI GDGCHC 4 cut(s) 69, 1206, 1263, 1347
SfaNI GCATC 2 cut(s) 145, 309
SfcI CTRYAG 1 cut(s) 708
SinI GGWCC 3 cut(s) 257, 947, 1091
SmiMI CAYNNNNRTG 1 cut(s) 921
SmlI CTYRAG 1 cut(s) 361
SmoI CTYRAG 1 cut(s) 361
SphI GCATGC 1 cut(s) 920
Sse9I AATT 8 cut(s) 161, 332, 336, 561, 740, 848, 1001, 1135
SsiI CCGC 3 cut(s) 532, 775, 1246
SspMI CTAG 5 cut(s) 74, 413, 906, 1050, 1308
SstI GAGCTC 2 cut(s) 69, 1347
StyD4I CCNGG 2 cut(s) 92, 635
StyI CCWWGG 1 cut(s) 412
TaaI ACNGT 4 cut(s) 313, 874, 1241, 1319
TaqI TCGA 3 cut(s) 820, 994, 1028
TasI AATT 8 cut(s) 161, 332, 336, 561, 740, 848, 1001, 1135
TatI WGTACW 2 cut(s) 85, 165
TauI GCSGC 1 cut(s) 1248
TfiI GAWTC 6 cut(s) 155, 192, 590, 991, 1118, 1286
Tru1I TTAA 3 cut(s) 27, 335, 339
Tru9I TTAA 3 cut(s) 27, 335, 339
TscAI CASTG 4 cut(s) 532, 691, 928, 1213
TseFI GTSAC 1 cut(s) 224
Tsp45I GTSAC 1 cut(s) 224
TspDTI ATGAA 4 cut(s) 168, 365, 789, 1299
TspGWI ACGGA 1 cut(s) 1322
TspRI CASTG 4 cut(s) 532, 691, 928, 1213
VpaK11BI GGWCC 3 cut(s) 257, 947, 1091
VspI ATTAAT 1 cut(s) 335
XapI RAATTY 2 cut(s) 740, 1001
XbaI TCTAGA 1 cut(s) 905
XceI RCATGY 4 cut(s) 11, 172, 358, 920
XmaJI CCTAGG 1 cut(s) 412
XmiI GTMKAC 1 cut(s) 1253
XspI CTAG 5 cut(s) 74, 413, 906, 1050, 1308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.