Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008417

Physical Location & Seq

Genomic Coordinates Reverse (-)

14786532 .. 14790501

Gene Structure 3970 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G30200.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2058 bp

ATGAGTGTTGATGAGAAGAGACAGCTTGTTTATGAACTGTCGAAGCAATCACATCTAGCTGCTGAGGTCTTGCAGGCATGGAGCCGCCAAGAGATTCTACAGATCTTATGCGCAGAAATGGGAAAAGAAAGGAAGTATACTGGTTTGACCAAAGTCAAGATCATCGAGACCCTTTTGAAAATTGTATCTGAGAAAAACTCTGGAGAGTGTGAAGGGAAGAAGAGAGATTCTGATTGTTTGCCTATTCAGAGAAACACTAAGAGACAAAGGAAGGTTGATAATCCTTCTCGGTATGTGATTCCAGCAACCAACATTGTAACAAGCAACAATGCCTCAGGGAGCTGCAGCTCGGTTAATACTAAAGGTGAGAGTACTACCATCTACTGCAAAAATTTGGCTTGTCGTGCTGTACTGAGACAGGAAGACTCGTTTTGCAGAAGGTGTTCATGTTGCATCTGTCGTAAGTATGATGATAACAAAGATCCTAGTCTCTGGTTAACATGTAGCTCAGATCCTCCATTTGAGGGTGAGTCTTGCGGATTCTCGTGTCATCTTGAATGTGCTTTCAACACTGAAAAATCCGGTCTTGGAAAAGACAAGCAAAGTGAGGGATGCTGCTTCTATTGTGTCTCTTGCGGTAAAGCAAACAGTTTGCTTGAATGCTGGAAGAAGCAATTGACGATTGCTAAAGAAACCAGAAGGGTAGAAGTGCTTTGTTACCGTCTTTTCTTAGTCCAGAAACTATTGAAGAGCTCAACTAAATACCGAAATCTGTGTGAGGTTGTGGATGAAGCTGTCAAGACTCTTGAAGCTGATGTGGGTCCTCTCACTGGTCTTCCTATGAAAATGGGTAGAGGAATTGTAAACAGACTTCATTCGGGACCCGATGTGCAGAAACTTTGCTCTTCTGCTCTTGAATCTCTTGAAACTATAGCAACTACACCTCCTGATGTTGCTGCATTACCTTCACCTCGCAGCTCCAAGATGCAGCAAGATACAGCAACCACAGGATCAACCAAGATCAGGTTCGAGGATGTAAACGCGACTTCACTTACAGTGGTTCTCGCCTCTAATGAAATTCCCTCACCTCCAAACATCGTTCACTACAGTATTTGGCATCGTAAGGTACCAGAAAAAGATTACCCGGAGAAATCGACTTGCACATTGTTTATTCCAAACACAAGATTTGTTGTCTCTGGATTAGCTCCAGCTTCTGAGTACTGCTTCAAAGTTGTGTCCTATAGTGGAACCAGAGAAATGGGCGTTGATGAAATCAATGTTTTGACACGTAGCGCTGAAGAAGGAGCGAATTGCTCTTCGGCAGTGGAAAGAAGCGTAAGCCCTCTCACAAATTGCAGCACATTGTCTTCTAATCCTTCTTCTGTTGAAGCTGAGTCCAACAACGATTACATTGTCCCAAAGAAGCCATCTTCAAAGAACGAAGACAACAATTCTCCTTCAGTCGATGAAAGTGCTGCGAAAAGGATGAAGAGGACAACCGACTCAGACATTGTACAGATTGAGAAGGACGTTGAGCAGATTGTGTTGTTGGATGATGAAGAACAAGAAGCTGTTCTGGATAAGACGGAATCTGAAACTCCAGTCGTGGTTACTACGAAAAGTCTTGTTGGTAATCGAAACAGTTCAGATGCGAGTTTGCCAATTACTCCCTTCAGGTCAGATGAAATCAAGAACCGTCAAGCTAGAATCGAAATATCGATGAAAGACAACTGTAACAACGGTGATCATTCAGCGAATGGAGGAACAGAAAGTGGATTAGAGCATTGTGTGAAGATCATAAGACAACTCGAGTGTTCAGGACATATCGATAAGAATTTCAGACAGAAGTTTCTGACTTGGTATAGCTTGAGAGCAACGTCACAAGAGATTAGAGTTGTGAAGATATTCATTGATACATTTATTGATGATCCCATGGCTTTGGCTGAGCAGCTCATTGATACTTTCGACGACCGTGTTTCGATAAAGCGTTCTGCGGTTGGTGGTAGCGGTGCGTCTGCAGTTGTTCCATCTGGATTCTGTATGAAGTTGTGGCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0005911 GO:0006950 GO:0007623 GO:0008150 GO:0009266 GO:0009409 GO:0009506 GO:0009628 GO:0009892 GO:0009893 GO:0009987 GO:0010048 GO:0010468 GO:0010604 GO:0010605 GO:0010629 GO:0010638 GO:0016604 GO:0016607 GO:0017053 GO:0019222 GO:0030054 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0031519 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032501 GO:0032922 GO:0032991 GO:0033043 GO:0033044 GO:0033554 GO:0035064 GO:0036293 GO:0040029 GO:0042393 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045814 GO:0048511 GO:0048518 GO:0048519 GO:0048522 GO:0048580 GO:0048583 GO:0048587 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051239 GO:0051246 GO:0051247 GO:0051569 GO:0051570 GO:0051571 GO:0051574 GO:0051716 GO:0055044 GO:0060255 GO:0061085 GO:0061087 GO:0065007 GO:0070013 GO:0070417 GO:0070482 GO:0080090 GO:0090568 GO:0140030 GO:0140034 GO:1900109 GO:1900111 GO:1902275 GO:1905269 GO:2000026 GO:2000028 GO:2000241 GO:2001252

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD_Oberon fn3

Protein Analysis

685

Amino Acids

75.85

Weight (kDa)

6.56

Isoelectric Point (pI)

54.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD_Oberon	PF07227	146 - 264	8.4e-34	PHD - plant homeodomain finger protein
Fn3_VIN3	PF23376	370 - 458	1.4e-33	VIN3-like, fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008417)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30200 AT4G30200 AT4G30200 AT4G30200
fragaria_vesca	FvH4_4g08010 FvH4_4g08010
malus_domestica	MD13G1252500.v1.1 MD16G1256500.v1.1
prunus_persica	Prupe.1G084700_v2.0.a1
pyrus_communis	pycom13g22550 pycom16g21760
rosa_chinensis	RchiOBHm_Chr4g0401761
rosa_laevigata	RLG00000009127
rosa_multiflora	Rmu_co8300969.1_g000001 Rmu_sc0001405.1_g000016
rosa_roxburghii	Rroxscaffold_5G00346250
rosa_rugosa	Rorug04G0032100 Rorug04G0032200
rosa_samantha	Rh4AG109000 Rh4BG102800 Rh4CG117300 Rh4DG100500
rosa_wichuraiana	Rw4G008850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	112
Acc65I	GGTACC	1 cut(s)	1126
AccB1I	GGYRCC	1 cut(s)	1126
AccI	GTMKAC	1 cut(s)	137
AccII	CGCG	1 cut(s)	1043
AciI	CCGC	5 cut(s)	85, 537, 636, 1994, 2007
AclWI	GGATC	4 cut(s)	476, 506, 1018, 1922
AcsI	RAATTY	3 cut(s)	391, 1077, 1834
AcuI	CTGAAG	3 cut(s)	1317, 1443, 1657
AfaI	GTAC	5 cut(s)	373, 411, 1128, 1220, 1515
AfeI	AGCGCT	1 cut(s)	1294
AfiI	CCNNNNNNNGG	3 cut(s)	524, 830, 1023
AflIII	ACRYGT	2 cut(s)	500, 1286
AjuI	GAANNNNNNNTTGG	2 cut(s)	1010, 1042
Alw21I	GWGCWC	1 cut(s)	755
Alw26I	GTCTC	7 cut(s)	13, 161, 256, 409, 494, 634, 1198
AlwI	GGATC	4 cut(s)	476, 506, 1018, 1922
AlwNI	CAGNNNCTG	1 cut(s)	1214
Ama87I	CYCGRG	1 cut(s)	1808
Aor51HI	AGCGCT	1 cut(s)	1294
ApoI	RAATTY	3 cut(s)	391, 1077, 1834
Asp700I	GAANNNNTTC	4 cut(s)	442, 1572, 1642, 1904
Asp718I	GGTACC	1 cut(s)	1126
AspLEI	GCGC	2 cut(s)	113, 1295
AspS9I	GGNCC	2 cut(s)	821, 881
AsuC2I	CCSGG	1 cut(s)	1145
AsuHPI	GGTGA	5 cut(s)	377, 539, 960, 1077, 1754
AvaI	CYCGRG	1 cut(s)	1808
AvaII	GGWCC	2 cut(s)	821, 881
AxyI	CCTNAGG	1 cut(s)	334
BanI	GGYRCC	1 cut(s)	1126
BanII	GRGCYC	1 cut(s)	755
BarI	GAAGNNNNNNTAC	2 cut(s)	855, 887
BauI	CACGAG	1 cut(s)	544
BbsI	GAAGAC	4 cut(s)	429, 827, 1359, 1449
Bbv12I	GWGCWC	1 cut(s)	755
BbvCI	CCTCAGC	1 cut(s)	63
BccI	CCATC	3 cut(s)	386, 1435, 2035
BcgI	CGANNNNNNTGC	2 cut(s)	1454, 1488
BclI	TGATCA	1 cut(s)	1744
BcnI	CCSGG	1 cut(s)	1145
BcoDI	GTCTC	7 cut(s)	13, 161, 256, 409, 494, 634, 1198
BfaI	CTAG	3 cut(s)	56, 486, 1704
BfmI	CTRYAG	6 cut(s)	98, 343, 930, 1105, 1240, 2016
BfoI	RGCGCY	1 cut(s)	1296
BglII	AGATCT	1 cut(s)	102
BlpI	GCTNAGC	1 cut(s)	1944
BmcAI	AGTACT	2 cut(s)	373, 1220
Bme1390I	CCNGG	1 cut(s)	1145
Bme18I	GGWCC	2 cut(s)	821, 881
BmeT110I	CYCGRG	1 cut(s)	1808
BmgT120I	GGNCC	2 cut(s)	821, 881
BmiI	GGNNCC	6 cut(s)	83, 822, 882, 883, 1128, 1249
BmrFI	CCNGG	1 cut(s)	1145
BmsI	GCATC	5 cut(s)	462, 602, 975, 1126, 1639
BoxI	GACNNNNGTC	1 cut(s)	152
BpiI	GAAGAC	4 cut(s)	429, 827, 1359, 1449
BplI	GAGNNNNNCTC	2 cut(s)	182, 214
BpmI	CTGGAG	3 cut(s)	222, 1191, 1584
Bpu10I	CCTNAGC	1 cut(s)	63
Bpu1102I	GCTNAGC	1 cut(s)	1944
BpuEI	CTTGAG	1 cut(s)	1888
BpuMI	CCSGG	1 cut(s)	1145
Bsa29I	ATCGAT	2 cut(s)	1718, 1827
BsaAI	YACGTR	1 cut(s)	1289
BsaI	GGTCTC	1 cut(s)	161
BsaJI	CCNNGG	1 cut(s)	1932
BsaWI	WCCGGW	1 cut(s)	581
BsaXI	ACNNNNNCTCC	2 cut(s)	928, 958
Bsc4I	CCNNNNNNNGG	3 cut(s)	524, 830, 1023
Bse1I	ACTGG	3 cut(s)	145, 835, 1601
Bse21I	CCTNAGG	1 cut(s)	334
BseCI	ATCGAT	2 cut(s)	1718, 1827
BseDI	CCNNGG	1 cut(s)	1932
BseGI	GGATG	5 cut(s)	617, 793, 1039, 1491, 1558
BseLI	CCNNNNNNNGG	3 cut(s)	524, 830, 1023
BseMII	CTCAG	9 cut(s)	54, 180, 348, 404, 522, 1206, 1383, 1518, 1935
BseNI	ACTGG	3 cut(s)	145, 835, 1601
BsgI	GTGCAG	1 cut(s)	911
Bsh1236I	CGCG	1 cut(s)	1043
Bsh1285I	CGRYCG	1 cut(s)	1972
BshNI	GGYRCC	1 cut(s)	1126
BshVI	ATCGAT	2 cut(s)	1718, 1827
BsiEI	CGRYCG	1 cut(s)	1972
BsiHKAI	GWGCWC	1 cut(s)	755
BsiHKCI	CYCGRG	1 cut(s)	1808
BsiSI	CCGG	2 cut(s)	582, 1145
BslFI	GGGAC	2 cut(s)	894, 1400
BslI	CCNNNNNNNGG	3 cut(s)	524, 830, 1023
BsmAI	GTCTC	7 cut(s)	13, 161, 256, 409, 494, 634, 1198
BsmFI	GGGAC	2 cut(s)	894, 1400
BsmI	GAATGC	1 cut(s)	665
Bso31I	GGTCTC	1 cut(s)	161
BsoBI	CYCGRG	1 cut(s)	1808
Bsp1286I	GDGCHC	1 cut(s)	755
Bsp1407I	TGTACA	1 cut(s)	1513
Bsp143I	GATC	9 cut(s)	102, 159, 481, 511, 1010, 1020, 1744, 1794, 1927
Bsp1720I	GCTNAGC	1 cut(s)	1944
Bsp19I	CCATGG	1 cut(s)	1932
BspACI	CCGC	5 cut(s)	85, 537, 636, 1994, 2007
BspCNI	CTCAG	9 cut(s)	55, 181, 347, 405, 521, 1207, 1384, 1517, 1936
BspDI	ATCGAT	2 cut(s)	1718, 1827
BspFNI	CGCG	1 cut(s)	1043
BspLI	GGNNCC	6 cut(s)	83, 822, 882, 883, 1128, 1249
BspMAI	CTGCAG	2 cut(s)	347, 2020
BspPI	GGATC	4 cut(s)	476, 506, 1018, 1922
BspQI	GCTCTTC	3 cut(s)	743, 910, 1321
BspT107I	GGYRCC	1 cut(s)	1126
BspTNI	GGTCTC	1 cut(s)	161
BsrGI	TGTACA	1 cut(s)	1513
BsrI	ACTGG	3 cut(s)	145, 835, 1601
BssECI	CCNNGG	1 cut(s)	1932
BssMI	GATC	9 cut(s)	102, 159, 481, 511, 1010, 1020, 1744, 1794, 1927
BssNAI	GTATAC	1 cut(s)	138
BssSI	CACGAG	1 cut(s)	544
BssT1I	CCWWGG	1 cut(s)	1932
Bst1107I	GTATAC	1 cut(s)	138
Bst2BI	CACGAG	1 cut(s)	544
Bst6I	CTCTTC	6 cut(s)	11, 215, 743, 910, 1321, 1484
BstAUI	TGTACA	1 cut(s)	1513
BstBAI	YACGTR	1 cut(s)	1289
BstC8I	GCNNGC	1 cut(s)	75
BstDSI	CCRYGG	1 cut(s)	1932
BstF5I	GGATG	5 cut(s)	617, 793, 1039, 1491, 1558
BstFNI	CGCG	1 cut(s)	1043
BstH2I	RGCGCY	1 cut(s)	1296
BstHHI	GCGC	2 cut(s)	113, 1295
BstKTI	GATC	9 cut(s)	105, 162, 484, 514, 1013, 1023, 1747, 1797, 1930
BstMAI	GTCTC	7 cut(s)	13, 161, 256, 409, 494, 634, 1198
BstMBI	GATC	9 cut(s)	102, 159, 481, 511, 1010, 1020, 1744, 1794, 1927
BstMCI	CGRYCG	1 cut(s)	1972
BstMWI	GCNNNNNNNGC	1 cut(s)	404
BstNSI	RCATGY	1 cut(s)	504
BstPAI	GACNNNNGTC	1 cut(s)	152
BstSCI	CCNGG	1 cut(s)	1143
BstSFI	CTRYAG	6 cut(s)	98, 343, 930, 1105, 1240, 2016
BstUI	CGCG	1 cut(s)	1043
BstV2I	GAAGAC	4 cut(s)	429, 827, 1359, 1449
BstX2I	RGATCY	3 cut(s)	102, 481, 511
BstXI	CCANNNNNNTGG	2 cut(s)	1258, 1939
BstYI	RGATCY	3 cut(s)	102, 481, 511
BstZ17I	GTATAC	1 cut(s)	138
Bsu15I	ATCGAT	2 cut(s)	1718, 1827
Bsu36I	CCTNAGG	1 cut(s)	334
BsuTUI	ATCGAT	2 cut(s)	1718, 1827
BtgI	CCRYGG	1 cut(s)	1932
BtsCI	GGATG	5 cut(s)	617, 793, 1039, 1491, 1558
BtsI	GCAGTG	1 cut(s)	1329
BtsIMutI	CAGTG	4 cut(s)	570, 828, 1062, 1329
Cac8I	GCNNGC	1 cut(s)	75
CaiI	CAGNNNCTG	1 cut(s)	1214
CfoI	GCGC	2 cut(s)	113, 1295
Cfr13I	GGNCC	2 cut(s)	821, 881
ClaI	ATCGAT	2 cut(s)	1718, 1827
CseI	GACGC	1 cut(s)	2001
Csp6I	GTAC	5 cut(s)	372, 410, 1127, 1219, 1514
CviAII	CATG	4 cut(s)	78, 447, 501, 1933
CviQI	GTAC	5 cut(s)	372, 410, 1127, 1219, 1514
DpnI	GATC	9 cut(s)	104, 161, 483, 513, 1012, 1022, 1746, 1796, 1929
DpnII	GATC	9 cut(s)	102, 159, 481, 511, 1010, 1020, 1744, 1794, 1927
Eam1104I	CTCTTC	6 cut(s)	11, 215, 743, 910, 1321, 1484
EarI	CTCTTC	6 cut(s)	11, 215, 743, 910, 1321, 1484
Ecl136II	GAGCTC	1 cut(s)	753
Eco130I	CCWWGG	1 cut(s)	1932
Eco24I	GRGCYC	1 cut(s)	755
Eco31I	GGTCTC	1 cut(s)	161
Eco47I	GGWCC	2 cut(s)	821, 881
Eco47III	AGCGCT	1 cut(s)	1294
Eco53kI	GAGCTC	1 cut(s)	753
Eco57I	CTGAAG	3 cut(s)	1317, 1443, 1657
Eco81I	CCTNAGG	1 cut(s)	334
Eco88I	CYCGRG	1 cut(s)	1808
EcoICRI	GAGCTC	1 cut(s)	753
EcoO109I	RGGNCCY	2 cut(s)	821, 881
EcoT14I	CCWWGG	1 cut(s)	1932
EcoT38I	GRGCYC	1 cut(s)	755
ErhI	CCWWGG	1 cut(s)	1932
FaeI	CATG	4 cut(s)	81, 450, 504, 1936
FaqI	GGGAC	2 cut(s)	894, 1400
FatI	CATG	4 cut(s)	77, 446, 500, 1932
FbaI	TGATCA	1 cut(s)	1744
FblI	GTMKAC	1 cut(s)	137
FokI	GGATG	5 cut(s)	624, 800, 1046, 1498, 1565
FriOI	GRGCYC	1 cut(s)	755
FspBI	CTAG	3 cut(s)	56, 486, 1704
FspI	TGCGCA	1 cut(s)	112
GlaI	GCGC	2 cut(s)	112, 1294
GsuI	CTGGAG	3 cut(s)	222, 1191, 1584
HaeII	RGCGCY	1 cut(s)	1296
HapII	CCGG	2 cut(s)	582, 1145
HgaI	GACGC	1 cut(s)	2001
HhaI	GCGC	2 cut(s)	113, 1295
Hin1II	CATG	4 cut(s)	81, 450, 504, 1936
Hin6I	GCGC	2 cut(s)	111, 1293
HinP1I	GCGC	2 cut(s)	111, 1293
HincII	GTYRAC	1 cut(s)	498
HindII	GTYRAC	1 cut(s)	498
HpaI	GTTAAC	1 cut(s)	498
HpaII	CCGG	2 cut(s)	582, 1145
HphI	GGTGA	5 cut(s)	377, 539, 960, 1077, 1754
Hpy166II	GTNNAC	5 cut(s)	138, 498, 865, 1039, 1102
Hpy8I	GTNNAC	5 cut(s)	138, 498, 865, 1039, 1102
Hpy99I	CGWCG	1 cut(s)	1970
HpyCH4IV	ACGT	3 cut(s)	1288, 1530, 1877
HpyF10VI	GCNNNNNNNGC	1 cut(s)	404
HpySE526I	ACGT	3 cut(s)	1288, 1530, 1877
Hsp92II	CATG	4 cut(s)	81, 450, 504, 1936
HspAI	GCGC	2 cut(s)	111, 1293
KflI	GGGWCCC	1 cut(s)	881
KpnI	GGTACC	1 cut(s)	1130
Ksp22I	TGATCA	1 cut(s)	1744
KspAI	GTTAAC	1 cut(s)	498
Kzo9I	GATC	9 cut(s)	102, 159, 481, 511, 1010, 1020, 1744, 1794, 1927
LguI	GCTCTTC	3 cut(s)	743, 910, 1321
LmnI	GCTCC	5 cut(s)	81, 339, 983, 1210, 1304
LweI	GCATC	5 cut(s)	462, 602, 975, 1126, 1639
MaeI	CTAG	3 cut(s)	56, 486, 1704
MaeII	ACGT	3 cut(s)	1288, 1530, 1877
MaeIII	GTNAC	5 cut(s)	316, 716, 1609, 1733, 1878
MalI	GATC	9 cut(s)	104, 161, 483, 513, 1012, 1022, 1746, 1796, 1929
MboI	GATC	9 cut(s)	102, 159, 481, 511, 1010, 1020, 1744, 1794, 1927
MfeI	CAATTG	1 cut(s)	674
MflI	RGATCY	3 cut(s)	102, 481, 511
MhlI	GDGCHC	1 cut(s)	755
MlyI	GAGTC	5 cut(s)	419, 539, 796, 1403, 1496
MmeI	TCCRAC	2 cut(s)	1422, 1530
MroXI	GAANNNNTTC	4 cut(s)	442, 1572, 1642, 1904
MseI	TTAA	2 cut(s)	354, 497
MspI	CCGG	2 cut(s)	582, 1145
MspR9I	CCNGG	1 cut(s)	1145
MunI	CAATTG	1 cut(s)	674
Mva1269I	GAATGC	1 cut(s)	665
MvnI	CGCG	1 cut(s)	1043
MwoI	GCNNNNNNNGC	1 cut(s)	404
NciI	CCSGG	1 cut(s)	1145
NcoI	CCATGG	1 cut(s)	1932
NdeII	GATC	9 cut(s)	102, 159, 481, 511, 1010, 1020, 1744, 1794, 1927
NlaIII	CATG	4 cut(s)	81, 450, 504, 1936
NlaIV	GGNNCC	6 cut(s)	83, 822, 882, 883, 1128, 1249
NmuCI	GTSAC	1 cut(s)	1878
NsbI	TGCGCA	1 cut(s)	112
NspI	RCATGY	1 cut(s)	504
PaeR7I	CTCGAG	1 cut(s)	1808
PciI	ACATGT	1 cut(s)	500
PciSI	GCTCTTC	3 cut(s)	743, 910, 1321
PctI	GAATGC	1 cut(s)	665
PdmI	GAANNNNTTC	4 cut(s)	442, 1572, 1642, 1904
PfeI	GAWTC	8 cut(s)	94, 227, 298, 540, 917, 1589, 1707, 2034
PleI	GAGTC	5 cut(s)	419, 538, 796, 1402, 1496
PpsI	GAGTC	5 cut(s)	419, 538, 796, 1402, 1496
Ppu21I	YACGTR	1 cut(s)	1289
PpuMI	RGGWCCY	2 cut(s)	821, 881
PscI	ACATGT	1 cut(s)	500
PshAI	GACNNNNGTC	1 cut(s)	152
Psp124BI	GAGCTC	1 cut(s)	755
Psp5II	RGGWCCY	2 cut(s)	821, 881
PspN4I	GGNNCC	6 cut(s)	83, 822, 882, 883, 1128, 1249
PspPI	GGNCC	2 cut(s)	821, 881
PspPPI	RGGWCCY	2 cut(s)	821, 881
PspXI	VCTCGAGB	1 cut(s)	1808
PstI	CTGCAG	2 cut(s)	347, 2020
PstNI	CAGNNNCTG	1 cut(s)	1214
PsuI	RGATCY	3 cut(s)	102, 481, 511
RsaI	GTAC	5 cut(s)	373, 411, 1128, 1220, 1515
RsaNI	GTAC	5 cut(s)	372, 410, 1127, 1219, 1514
SacI	GAGCTC	1 cut(s)	755
SapI	GCTCTTC	3 cut(s)	743, 910, 1321
SaqAI	TTAA	2 cut(s)	354, 497
Sau3AI	GATC	9 cut(s)	102, 159, 481, 511, 1010, 1020, 1744, 1794, 1927
Sau96I	GGNCC	2 cut(s)	821, 881
ScaI	AGTACT	2 cut(s)	373, 1220
SchI	GAGTC	5 cut(s)	419, 539, 796, 1403, 1496
ScrFI	CCNGG	1 cut(s)	1145
SduI	GDGCHC	1 cut(s)	755
SfaNI	GCATC	5 cut(s)	462, 602, 975, 1126, 1639
SfcI	CTRYAG	6 cut(s)	98, 343, 930, 1105, 1240, 2016
Sfr274I	CTCGAG	1 cut(s)	1808
SinI	GGWCC	2 cut(s)	821, 881
SlaI	CTCGAG	1 cut(s)	1808
SmlI	CTYRAG	2 cut(s)	1808, 1867
SmoI	CTYRAG	2 cut(s)	1808, 1867
SsiI	CCGC	5 cut(s)	85, 537, 636, 1994, 2007
SspMI	CTAG	3 cut(s)	56, 486, 1704
SstI	GAGCTC	1 cut(s)	755
StyD4I	CCNGG	1 cut(s)	1143
StyI	CCWWGG	1 cut(s)	1932
TaiI	ACGT	3 cut(s)	1291, 1533, 1880
TatI	WGTACW	4 cut(s)	371, 409, 1218, 1513
TauI	GCSGC	1 cut(s)	87
TfiI	GAWTC	8 cut(s)	94, 227, 298, 540, 917, 1589, 1707, 2034
Tru1I	TTAA	2 cut(s)	354, 497
Tru9I	TTAA	2 cut(s)	354, 497
TscAI	CASTG	4 cut(s)	577, 835, 1062, 1329
TseFI	GTSAC	1 cut(s)	1878
Tsp45I	GTSAC	1 cut(s)	1878
TspGWI	ACGGA	1 cut(s)	1601
TspRI	CASTG	4 cut(s)	577, 835, 1062, 1329
VpaK11BI	GGWCC	2 cut(s)	821, 881
XapI	RAATTY	3 cut(s)	391, 1077, 1834
XceI	RCATGY	1 cut(s)	504
XhoI	CTCGAG	1 cut(s)	1808
XmiI	GTMKAC	1 cut(s)	137
XmnI	GAANNNNTTC	4 cut(s)	442, 1572, 1642, 1904
XspI	CTAG	3 cut(s)	56, 486, 1704
ZrmI	AGTACT	2 cut(s)	373, 1220

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.