Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0008417

Physical Location & Seq

Genomic Coordinates Forward (+)

47158095 .. 47163234

Gene Structure 5140 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000009127

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2208 bp

ATGGCCTCGGATTCTTCTACTCAAGGACTTGCACAGGATCTGTCAAATTGCAGTAACTTAAGTATAGACAAAAAGAGAAAACTTGTCTATGAAATATCAAAATGGTCACAGGGTGCTTCTGAAGTGCTACAGGCATGGAGTCGTCAGGAGATTTTACAAATTCTATGTGTAGAGATGGGGAAAGAAAGGAAATATACTGGCTTGACAAAAGTGAAAATAATAGAGCACCTTCTGAAAGTTGTGTCTGAAAACAAATCAGGAGGAAGTGATGTTGTAGCTGACGTTAAACCACAGTCATCCTCTGCATCTGGCCAAAGAATTACCAAAAGGCAGAGGAAAACTGAGAATCCATCTCGACTATCTGTTCCAGAAAACAATTCTCCCATCAATAGTAGTGGTTGCGAATTAGCGAATACTATATTCTGCAAAAACTCAGCTTGCAGAGCTTCCTTAAATCGAGAAGATGCATTTTGCAAGAGATGTTCGTGTTGCATATGTTATCAGTATGATGATAACAAGGATCCTAGCCTATGGTTGGTTTGCAGCTCAGATCCTCCATTCCAGGGTAAATCATGTGGCATGTCGTGCCACCTTGATTGTGCTTTTAAACATGAAAGTTCTGGTATTGGAAAAGAGGGACAATGCATGGGACTTGATGGGAGCTTTTATTGTGTATCTTGTGGTAAAGTGAATGATTTGCTCGGATCCTGGCGAAAACAACTAGTGATAGCAAAGGATACCAGACGGGTGGACATACTGTGCTATCGTGTGTCCTTGAGTCATAAGTTTCTCAAAGGAACTGTGAAGTATCAAAAGCTTCACGAGATTGTAGATGAAGCTGTGAAGAAGCTTGAAGCTGAAGTGGGTCTGTTAACTGGCTTACCCAATAAGATGGGTCGTGGTATTGTTAATAGGCTTTCTTCTGGACCAGAGGTTCAGAGACTTTGTGCATTTGCTGTGGACTCCCTTGATTCATTAGTTTCCAATGCAATGTTCCATCCATTGCCCAAGCATGAAATACAAGATTTAGATTTGATTGATCCAGAAATGATCAGATTTGAGGACATCCACGCTACATCCCTCAACGTGATTTTGGGTTCTGTAGATCCTAGCCCCAAAAGCTTGGTTGGTTACAGGTTATGGCATCGTAAGGCTCAAGATATGAGTTATCCAGCAGAGCCAACATGCACATTGTTACCACCAAAGACAAAGTTTATTGTCACAGGACTAACTCCAGCTACAGAATACTGCTTTAAAGTCGCTTCATTTGATGGTTCAAGACATCTGGGCATGTGTGAAGTTCGGATCTCCACAAGTACTGCTGGGGATGAAGTTCCAAATTGTTCAGTAACAGAGCGAAGTCAAAGCCCAGCTACCAACTATAGTGGCCTTTCTAATCCATCTTCAGTGGAAGATGAAACTAATAACATTACTCCCTATAGTGACCAAGCTGATAACCGAGCAGACACTTACCGTAATCAATGCGATGACACTGAAAAGTCTACTTCTGCTAATTTGTCAAATGGTGCTATCACCTGCAATAGCATCGGCAGAGGACCTACAGAAGCCAATACAGTTTCTTTGCTGGATGAGGAACATGCGGCCTCCATATCCAATTTTGACGTCCTAAAACCTGAGTGCAAGCAATCACCCGAATGTCAAATTATTGAAGACATCAGTACTGGTAATGGGTCCAATTCCCCTGTTCGTACTGGAATGGAATGTGTACCCTTTGTTAATAGCTCAGAAGCTTGCTTGCCCATCACTCCATGCAAATTGGAAACACTTAAAGATGGGTTAGGAAGGAATGAAAGATCCAATTCCAGCTGCAAGGATTTGAAAAATGGGGCTGGGAAAGGGGAGGAACCCCAAGATGGCAGTACATCAAAGAAGAGAAGTGGGGAAAGGCAAGATGAGAAGTGTGTGGCAAATGGTGTTTCGGATAGGGATTTCGAGTATTATGTGAAGGTTATCAGATGGTTAGAATGTGAGGGACATATCGAGCAGAACTTTAGACAAAAATTTCTGACTTGGTATAGCTTGAGAGCAACCCCACAGGAGGTAAGGATTGTGAAGGTGTTTGTGGATACCTTTATTGAAGATCCAGCATCTCTTGCAGGGCAACTTATAGACACCTTTGCAGAAAGCATTTCAAGCAAGAAGTCATCTGTTGTGCCAAGTGGGTTCTGCATGAAACTTTGGCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0005911 GO:0006950 GO:0007623 GO:0008150 GO:0009266 GO:0009409 GO:0009506 GO:0009628 GO:0009892 GO:0009893 GO:0009987 GO:0010048 GO:0010468 GO:0010604 GO:0010605 GO:0010629 GO:0010638 GO:0016604 GO:0016607 GO:0017053 GO:0019222 GO:0030054 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0031519 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032501 GO:0032922 GO:0032991 GO:0033043 GO:0033044 GO:0033554 GO:0035064 GO:0036293 GO:0040029 GO:0042393 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045814 GO:0048511 GO:0048518 GO:0048519 GO:0048522 GO:0048580 GO:0048583 GO:0048587 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051239 GO:0051246 GO:0051247 GO:0051569 GO:0051570 GO:0051571 GO:0051574 GO:0051716 GO:0055044 GO:0060255 GO:0061085 GO:0061087 GO:0065007 GO:0070013 GO:0070417 GO:0070482 GO:0080090 GO:0090568 GO:0140030 GO:0140034 GO:1900109 GO:1900111 GO:1902275 GO:1905269 GO:2000026 GO:2000028 GO:2000241 GO:2001252

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD_Oberon fn3

Protein Analysis

736

Amino Acids

80.95

Weight (kDa)

6.19

Isoelectric Point (pI)

50.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD_Oberon	PF07227	142 - 262	2e-36	PHD - plant homeodomain finger protein
Fn3_VIN3	PF23376	351 - 438	1.6e-37	VIN3-like, fibronectin type-III domain
VIN3_C	PF23380	648 - 721	3e-39	VIN3-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008417)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30200 AT4G30200 AT4G30200 AT4G30200
fragaria_vesca	FvH4_4g08010 FvH4_4g08010
malus_domestica	MD13G1252500.v1.1 MD16G1256500.v1.1
prunus_persica	Prupe.1G084700_v2.0.a1
pyrus_communis	pycom13g22550 pycom16g21760
rosa_chinensis	RchiOBHm_Chr4g0401761
rosa_laevigata	RLG00000009127
rosa_multiflora	Rmu_co8300969.1_g000001 Rmu_sc0001405.1_g000016
rosa_roxburghii	Rroxscaffold_5G00346250
rosa_rugosa	Rorug04G0032100 Rorug04G0032200
rosa_samantha	Rh4AG109000 Rh4BG102800 Rh4CG117300 Rh4DG100500
rosa_wichuraiana	Rw4G008850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1544
AatII	GACGTC	1 cut(s)	1626
Acc36I	ACCTGC	1 cut(s)	1544
AccI	GTMKAC	1 cut(s)	1502
AciI	CCGC	1 cut(s)	1601
AcoI	YGGCCR	1 cut(s)	310
AcsI	RAATTY	2 cut(s)	159, 2021
AcuI	CTGAAG	3 cut(s)	141, 879, 1389
AcyI	GRCGYC	1 cut(s)	1623
AdeI	CACNNNGTG	1 cut(s)	113
AfaI	GTAC	5 cut(s)	1318, 1681, 1711, 1728, 1882
AfiI	CCNNNNNNNGG	4 cut(s)	535, 563, 1874, 2059
AflII	CTTAAG	1 cut(s)	58
AgsI	TTSAA	6 cut(s)	854, 1278, 1670, 1840, 2099, 2154
AhlI	ACTAGT	1 cut(s)	721
AjnI	CCWGG	2 cut(s)	561, 707
AjuI	GAANNNNNNNTTGG	2 cut(s)	977, 1009
AloI	GAACNNNNNNTCC	2 cut(s)	918, 950
Alw21I	GWGCWC	1 cut(s)	228
Alw26I	GTCTC	1 cut(s)	934
AlwNI	CAGNNNCTG	1 cut(s)	40
AoxI	GGCC	4 cut(s)	3, 310, 1387, 1602
ApeKI	GCWGC	2 cut(s)	543, 1827
ApoI	RAATTY	2 cut(s)	159, 2021
AspS9I	GGNCC	3 cut(s)	926, 1556, 1692
AsuHPI	GGTGA	2 cut(s)	1525, 1641
AvaII	GGWCC	3 cut(s)	926, 1556, 1692
BalI	TGGCCA	1 cut(s)	312
BamHI	GGATCC	2 cut(s)	520, 704
BauI	CACGAG	1 cut(s)	821
BbsI	GAAGAC	1 cut(s)	1677
Bbv12I	GWGCWC	1 cut(s)	228
BbvI	GCAGC	2 cut(s)	555, 1814
BcgI	CGANNNNNNTGC	2 cut(s)	1528, 1562
BciT130I	CCWGG	2 cut(s)	563, 709
BciVI	GTATCC	2 cut(s)	730, 2080
BclI	TGATCA	1 cut(s)	1050
BcoDI	GTCTC	1 cut(s)	934
BcuI	ACTAGT	1 cut(s)	721
BfaI	CTAG	3 cut(s)	525, 722, 1110
BfmI	CTRYAG	6 cut(s)	128, 1101, 1239, 1381, 1438, 1560
BfrI	CTTAAG	1 cut(s)	58
BfuAI	ACCTGC	1 cut(s)	1544
BfuI	GTATCC	2 cut(s)	730, 2080
BisI	GCNGC	3 cut(s)	544, 1602, 1828
BlsI	GCNGC	3 cut(s)	545, 1603, 1829
BmcAI	AGTACT	2 cut(s)	1318, 1681
Bme1390I	CCNGG	2 cut(s)	563, 709
Bme18I	GGWCC	3 cut(s)	926, 1556, 1692
BmgT120I	GGNCC	3 cut(s)	926, 1556, 1692
BmiI	GGNNCC	4 cut(s)	522, 706, 1693, 1866
BmrFI	CCNGG	2 cut(s)	563, 709
BmsI	GCATC	5 cut(s)	314, 454, 1153, 1554, 2117
BpiI	GAAGAC	1 cut(s)	1677
BpmI	CTGGAG	1 cut(s)	1218
BpuEI	CTTGAG	4 cut(s)	6, 796, 1140, 2062
BsaHI	GRCGYC	1 cut(s)	1623
BsaJI	CCNNGG	2 cut(s)	6, 562
Bsc4I	CCNNNNNNNGG	4 cut(s)	535, 563, 1874, 2059
Bse1I	ACTGG	4 cut(s)	202, 880, 1687, 1717
Bse3DI	GCAATG	2 cut(s)	996, 1001
BseBI	CCWGG	2 cut(s)	563, 709
BseDI	CCNNGG	2 cut(s)	6, 562
BseGI	GGATG	6 cut(s)	296, 997, 1065, 1076, 1333, 1594
BseLI	CCNNNNNNNGG	4 cut(s)	535, 563, 1874, 2059
BseMI	GCAATG	2 cut(s)	996, 1001
BseMII	CTCAG	5 cut(s)	333, 447, 561, 1626, 1758
BseNI	ACTGG	4 cut(s)	202, 880, 1687, 1717
BseXI	GCAGC	2 cut(s)	555, 1814
BseYI	CCCAGC	3 cut(s)	1322, 1369, 1850
BshFI	GGCC	4 cut(s)	5, 312, 1389, 1604
BsiHKAI	GWGCWC	1 cut(s)	228
BslFI	GGGAC	3 cut(s)	651, 663, 2007
BslI	CCNNNNNNNGG	4 cut(s)	535, 563, 1874, 2059
BsmAI	GTCTC	1 cut(s)	934
BsmFI	GGGAC	3 cut(s)	651, 663, 2007
BsnI	GGCC	4 cut(s)	5, 312, 1389, 1604
Bsp1286I	GDGCHC	1 cut(s)	228
BspACI	CCGC	1 cut(s)	1601
BspANI	GGCC	4 cut(s)	5, 312, 1389, 1604
BspCNI	CTCAG	5 cut(s)	334, 446, 560, 1627, 1757
BspLI	GGNNCC	4 cut(s)	522, 706, 1693, 1866
BspMI	ACCTGC	1 cut(s)	1544
BspTI	CTTAAG	1 cut(s)	58
BsrDI	GCAATG	2 cut(s)	996, 1001
BsrI	ACTGG	4 cut(s)	202, 880, 1687, 1717
BssECI	CCNNGG	2 cut(s)	6, 562
BssNI	GRCGYC	1 cut(s)	1623
BssSI	CACGAG	1 cut(s)	821
Bst2BI	CACGAG	1 cut(s)	821
Bst2UI	CCWGG	2 cut(s)	563, 709
Bst4CI	ACNGT	5 cut(s)	294, 759, 802, 1475, 1576
Bst6I	CTCTTC	1 cut(s)	1886
BstACI	GRCGYC	1 cut(s)	1623
BstAFI	CTTAAG	1 cut(s)	58
BstAPI	GCANNNNNTGC	2 cut(s)	585, 2114
BstC8I	GCNNGC	4 cut(s)	439, 1643, 1753, 1757
BstDEI	CTNAG	5 cut(s)	342, 433, 547, 1635, 1744
BstF5I	GGATG	6 cut(s)	296, 997, 1065, 1076, 1333, 1594
BstMAI	GTCTC	1 cut(s)	934
BstMWI	GCNNNNNNNGC	5 cut(s)	443, 585, 1119, 2114, 2154
BstNI	CCWGG	2 cut(s)	563, 709
BstNSI	RCATGY	4 cut(s)	583, 1188, 1294, 1601
BstSCI	CCNGG	2 cut(s)	561, 707
BstSFI	CTRYAG	6 cut(s)	128, 1101, 1239, 1381, 1438, 1560
BstV1I	GCAGC	2 cut(s)	555, 1814
BstV2I	GAAGAC	1 cut(s)	1677
BstX2I	RGATCY	8 cut(s)	37, 520, 550, 704, 1105, 1305, 1814, 2101
BstXI	CCANNNNNNTGG	3 cut(s)	748, 892, 1123
BstYI	RGATCY	8 cut(s)	37, 520, 550, 704, 1105, 1305, 1814, 2101
BsuI	GTATCC	2 cut(s)	730, 2080
BsuRI	GGCC	4 cut(s)	5, 312, 1389, 1604
BtgZI	GCGATG	1 cut(s)	1500
BtsCI	GGATG	6 cut(s)	296, 997, 1065, 1076, 1333, 1594
BtsIMutI	CAGTG	2 cut(s)	1413, 1491
BveI	ACCTGC	1 cut(s)	1544
Cac8I	GCNNGC	4 cut(s)	439, 1643, 1753, 1757
CaiI	CAGNNNCTG	1 cut(s)	40
Cfr13I	GGNCC	3 cut(s)	926, 1556, 1692
Csp6I	GTAC	5 cut(s)	1317, 1680, 1710, 1727, 1881
CspCI	CAANNNNNGTGG	6 cut(s)	376, 411, 578, 613, 1366, 1401
CviQI	GTAC	5 cut(s)	1317, 1680, 1710, 1727, 1881
DdeI	CTNAG	5 cut(s)	342, 433, 547, 1635, 1744
DraI	TTTAAA	2 cut(s)	607, 1255
DraIII	CACNNNGTG	1 cut(s)	113
EaeI	YGGCCR	1 cut(s)	310
Eam1104I	CTCTTC	1 cut(s)	1886
EarI	CTCTTC	1 cut(s)	1886
Eco47I	GGWCC	3 cut(s)	926, 1556, 1692
Eco57I	CTGAAG	3 cut(s)	141, 879, 1389
EcoO109I	RGGNCCY	1 cut(s)	1556
EcoRII	CCWGG	2 cut(s)	561, 707
EcoT22I	ATGCAT	2 cut(s)	469, 647
FaqI	GGGAC	3 cut(s)	651, 663, 2007
FauNDI	CATATG	1 cut(s)	494
FbaI	TGATCA	1 cut(s)	1050
FblI	GTMKAC	1 cut(s)	1502
Fnu4HI	GCNGC	3 cut(s)	544, 1602, 1828
FokI	GGATG	6 cut(s)	283, 984, 1052, 1063, 1340, 1601
Fsp4HI	GCNGC	3 cut(s)	544, 1602, 1828
FspBI	CTAG	3 cut(s)	525, 722, 1110
GluI	GCNGC	3 cut(s)	544, 1602, 1828
GsaI	CCCAGC	3 cut(s)	1326, 1373, 1854
GsuI	CTGGAG	1 cut(s)	1218
HaeIII	GGCC	4 cut(s)	5, 312, 1389, 1604
Hin1I	GRCGYC	1 cut(s)	1623
HincII	GTYRAC	1 cut(s)	873
HindII	GTYRAC	1 cut(s)	873
HindIII	AAGCTT	4 cut(s)	815, 848, 1120, 1749
HinfI	GANTC	6 cut(s)	11, 139, 346, 778, 962, 971
HpaI	GTTAAC	1 cut(s)	873
HphI	GGTGA	2 cut(s)	1525, 1641
Hpy166II	GTNNAC	5 cut(s)	751, 873, 961, 1503, 1727
Hpy8I	GTNNAC	5 cut(s)	751, 873, 961, 1503, 1727
HpyAV	CCTTC	4 cut(s)	239, 1797, 1960, 2068
HpyCH4III	ACNGT	5 cut(s)	294, 759, 802, 1475, 1576
HpyCH4IV	ACGT	3 cut(s)	282, 1086, 1623
HpyF10VI	GCNNNNNNNGC	5 cut(s)	443, 585, 1119, 2114, 2154
HpyF3I	CTNAG	5 cut(s)	342, 433, 547, 1635, 1744
HpySE526I	ACGT	3 cut(s)	282, 1086, 1623
Hsp92I	GRCGYC	1 cut(s)	1623
Ksp22I	TGATCA	1 cut(s)	1050
KspAI	GTTAAC	1 cut(s)	873
LmnI	GCTCC	1 cut(s)	660
Lsp1109I	GCAGC	2 cut(s)	555, 1814
LweI	GCATC	5 cut(s)	314, 454, 1153, 1554, 2117
MaeI	CTAG	3 cut(s)	525, 722, 1110
MaeII	ACGT	3 cut(s)	282, 1086, 1623
MaeIII	GTNAC	7 cut(s)	53, 105, 1130, 1194, 1219, 1348, 1442
MboII	GAAGA	9 cut(s)	6, 473, 856, 912, 1395, 1424, 1682, 1903, 2111
MflI	RGATCY	8 cut(s)	37, 520, 550, 704, 1105, 1305, 1814, 2101
MhlI	GDGCHC	1 cut(s)	228
MlsI	TGGCCA	1 cut(s)	312
MluNI	TGGCCA	1 cut(s)	312
MlyI	GAGTC	3 cut(s)	148, 787, 956
Mox20I	TGGCCA	1 cut(s)	312
Mph1103I	ATGCAT	2 cut(s)	469, 647
MscI	TGGCCA	1 cut(s)	312
MseI	TTAA	9 cut(s)	59, 285, 452, 606, 872, 909, 1254, 1737, 1788
MslI	CAYNNNNRTG	1 cut(s)	1654
Msp20I	TGGCCA	1 cut(s)	312
MspA1I	CMGCKG	1 cut(s)	1827
MspCI	CTTAAG	1 cut(s)	58
MspR9I	CCNGG	2 cut(s)	563, 709
MvaI	CCWGG	2 cut(s)	563, 709
MwoI	GCNNNNNNNGC	5 cut(s)	443, 585, 1119, 2114, 2154
NdeI	CATATG	1 cut(s)	494
NlaIV	GGNNCC	4 cut(s)	522, 706, 1693, 1866
NmuCI	GTSAC	3 cut(s)	105, 1219, 1442
NsiI	ATGCAT	2 cut(s)	469, 647
NspI	RCATGY	4 cut(s)	583, 1188, 1294, 1601
PaqCI	CACCTGC	1 cut(s)	1544
PfeI	GAWTC	3 cut(s)	11, 346, 971
PkrI	GCNGC	3 cut(s)	545, 1603, 1829
PleI	GAGTC	3 cut(s)	147, 786, 956
PpsI	GAGTC	3 cut(s)	147, 786, 956
PpuMI	RGGWCCY	1 cut(s)	1556
Psp5II	RGGWCCY	1 cut(s)	1556
Psp6I	CCWGG	2 cut(s)	561, 707
PspFI	CCCAGC	3 cut(s)	1322, 1369, 1850
PspGI	CCWGG	2 cut(s)	561, 707
PspN4I	GGNNCC	4 cut(s)	522, 706, 1693, 1866
PspPI	GGNCC	3 cut(s)	926, 1556, 1692
PspPPI	RGGWCCY	1 cut(s)	1556
PstNI	CAGNNNCTG	1 cut(s)	40
PsuI	RGATCY	8 cut(s)	37, 520, 550, 704, 1105, 1305, 1814, 2101
PvuII	CAGCTG	1 cut(s)	1827
RsaI	GTAC	5 cut(s)	1318, 1681, 1711, 1728, 1882
RsaNI	GTAC	5 cut(s)	1317, 1680, 1710, 1727, 1881
RseI	CAYNNNNRTG	1 cut(s)	1654
SaqAI	TTAA	9 cut(s)	59, 285, 452, 606, 872, 909, 1254, 1737, 1788
SatI	GCNGC	3 cut(s)	544, 1602, 1828
Sau96I	GGNCC	3 cut(s)	926, 1556, 1692
ScaI	AGTACT	2 cut(s)	1318, 1681
SchI	GAGTC	3 cut(s)	148, 787, 956
ScrFI	CCNGG	2 cut(s)	563, 709
SduI	GDGCHC	1 cut(s)	228
SfaNI	GCATC	5 cut(s)	314, 454, 1153, 1554, 2117
SfcI	CTRYAG	6 cut(s)	128, 1101, 1239, 1381, 1438, 1560
SinI	GGWCC	3 cut(s)	926, 1556, 1692
SmiMI	CAYNNNNRTG	1 cut(s)	1654
SmlI	CTYRAG	5 cut(s)	21, 58, 775, 1155, 2041
SmoI	CTYRAG	5 cut(s)	21, 58, 775, 1155, 2041
SpeI	ACTAGT	1 cut(s)	721
SsiI	CCGC	1 cut(s)	1601
SspMI	CTAG	3 cut(s)	525, 722, 1110
StyD4I	CCNGG	2 cut(s)	561, 707
TaaI	ACNGT	5 cut(s)	294, 759, 802, 1475, 1576
TaiI	ACGT	3 cut(s)	285, 1089, 1626
TaqI	TCGA	4 cut(s)	355, 457, 1953, 2001
TatI	WGTACW	3 cut(s)	1316, 1679, 1880
TauI	GCSGC	1 cut(s)	1604
TfiI	GAWTC	3 cut(s)	11, 346, 971
Tru1I	TTAA	9 cut(s)	59, 285, 452, 606, 872, 909, 1254, 1737, 1788
Tru9I	TTAA	9 cut(s)	59, 285, 452, 606, 872, 909, 1254, 1737, 1788
TscAI	CASTG	2 cut(s)	1413, 1498
TseFI	GTSAC	3 cut(s)	105, 1219, 1442
TseI	GCWGC	2 cut(s)	543, 1827
Tsp45I	GTSAC	3 cut(s)	105, 1219, 1442
TspRI	CASTG	2 cut(s)	1413, 1498
Vha464I	CTTAAG	1 cut(s)	58
VpaK11BI	GGWCC	3 cut(s)	926, 1556, 1692
XapI	RAATTY	2 cut(s)	159, 2021
XceI	RCATGY	4 cut(s)	583, 1188, 1294, 1601
XmiI	GTMKAC	1 cut(s)	1502
XspI	CTAG	3 cut(s)	525, 722, 1110
ZraI	GACGTC	1 cut(s)	1624
ZrmI	AGTACT	2 cut(s)	1318, 1681
Zsp2I	ATGCAT	2 cut(s)	469, 647

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.