Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0008417

Physical Location & Seq

Genomic Coordinates Reverse (-)

26931824 .. 26942972

Gene Structure 11149 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1252500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2217 bp

ATGGCCACGGATTCTTCTCACGGACTTGCACTTGATCATTTGAACAGCAGCAAGTTAAGTATGGATAAAAGGAGAGAGCTTGTCTATGAAGTATCAAAGTGGCCACGTGGTGCCTCTGAAGTGTTACAGTCATGGAGCCGTCAGGAGATTTTACAGATCCTATGTGCAGAAATGGGAAAAGAAAGGAAATATACTGGCTTGACAAAAGTGAAAATAATAGAGCACCTTCTGAAAGTTGTGTCTGAAAAGAAAGCAGGGGGAGGTGAGGATGTAACAGACCTTAAACCACAGTCATCTAATGCCACTGGCCAAAGAACTACTAAAAGGCAGAGGAAAACTGAGAATCCATCTCGGCTACATGTTCCAGAGAATTGTATTTCTAAAAATAGTAGTGGGAGTGACCTAGCCAATAATGCATTTTGCAAAAACTCAGCTTGCAGAGCTACCTTAAATCCGGAAGATGCATTTTGCAAAAGATGTTCGTGTTGCATCTGTTACATGTTTGATGACAACAAGGACCCGAGCCTTTGGTTGGTTTGCAGCTCTGAGCCGCCGTTCGAGGGTAATTCATGTGGCATGTCGTGCCACCTTGAGTGTGCTTTAAAGCGTGAAAGTTCTGGTATTGGAAAAGAGAGAGGACGTAGGGGACTTGATGGGAGCTTTTGTTGTATATCTTGTGGCAAAGTGAATGATTTGCTCGGATCCTGGCGGAAACAGCTAGTAATAGCAAAGGATACCAGACGGGTAGACATACTGTGCTATCGTATTTCCTTGAGTCATAAGCTTCTCAAGGGGACTGCAAAGTATCAAAAGCTTCATGAGATTGTGGATGAGGCTATGAAGAAGCTTCAAGGTGAAGTGGGTCCGCTAACTGGCTTACCATTAAAGATGGGTCGGGGTATTGTTAACAGGCTTTCTTCTGGACCAGAGATTCAGAAACTATGTACATTTGCTGTGGAGTCACTGGATTCGGTGCTTCAGAAAGCAACATTGCCTCTATTGGCCAAGCCTAATGTACAAGATCCAAGTTTTATTGCTCCAGACATGGTTAGATTTGAGGATGTCCATGCTACATCGCTCACTGTGGTTTTGAGTTCTGAATATCCTCCCTCAGAAATTTTAGTTGGTTACAAATTATGGCACCGGAAGGCTGATGATATGAATTATCCAACAGAACCCACTGCTACACTGTTGTTTGCACCAAAGACGAGATTTGTTGTCACTGGACTAACTCCAGCTACAGAGTACTGTTTCAAAGTGACTTCGTTCAATGATTCAAGACATTTGGGCATGTGTGAAGTATGGTTCTCCACAAGTACTGCTGGAGATGAAGTCCCTAATTGTTCAGTAACACAGAGAAGTCAAAGCCCAGTTACCAACTATAGTAGCCTTTCTAATCCTTCTTCAGTGGAAGATGAAACTAATAATATTACTGCTTATGGTGATCAAGCTGATAACCGAGCTGACAATTATATTACTTTCTGTAAGGACACTGATAATACCGTCTTTGCTGATTTATCAAATGATGTTGTCAATGCCAACAGCATGGATAGAGGACCTACAGCAGATGTTATTTCAATGCTGGACGAGGAACACACCAATGGGATGGTTGGCTCCATATCTAGATCCGATGTCATTGAACTCGAGCGCAAGCAATCACCAGATTGCCAAATCGTTGAAGACATCAGCACTGATAATGGGTCAAATTCCCCTGCTCGAACTGGAATGGAATGTGTCCCATTTGTTGGTAGCTCAGAGGCTGGCTTACCCATCACTCCTTGCAAAATCGACATTCTTAAAGATGGGCTAGGAAGGAATGTAAGATCAAATTCCAGTAGCAAGGATTTAAAAAATGGGACTGGGAAAGGAGAGGAACCCCAAGATGGCAGCACATCAAAAAAGAGAAGTGCGGAAAGGAAAGGTGAGGAGTGTGTGACAAACAATGATTCAGATAGGGATTTTGAGTATTACGTGAAGATTATCAGGTGGTTAGAGTGCGAGGGGCATATCGAGCAGAACTTCCGACAGAAATTCCTGACCTGGTATAGCTTGAGAGCTACCCCTCAGGAGGTAAGGATTGTGAAAGTGTTTGTAGATACCTTTATCGAAGATCCTGCATCGCTTGCAGGGCAACTTGTTGACACCTTCTCAGAAAGTATTTCAAGCAAGAAATCGTGTGTTGTGCCCAACGGGTTCTGCATGAAGCTTTGGCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0005911 GO:0006950 GO:0007623 GO:0008150 GO:0009266 GO:0009409 GO:0009506 GO:0009628 GO:0009892 GO:0009893 GO:0009987 GO:0010048 GO:0010468 GO:0010604 GO:0010605 GO:0010629 GO:0010638 GO:0016604 GO:0016607 GO:0017053 GO:0019222 GO:0030054 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0031519 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032501 GO:0032922 GO:0032991 GO:0033043 GO:0033044 GO:0033554 GO:0035064 GO:0036293 GO:0040029 GO:0042393 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045814 GO:0048511 GO:0048518 GO:0048519 GO:0048522 GO:0048580 GO:0048583 GO:0048587 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051239 GO:0051246 GO:0051247 GO:0051569 GO:0051570 GO:0051571 GO:0051574 GO:0051716 GO:0055044 GO:0060255 GO:0061085 GO:0061087 GO:0065007 GO:0070013 GO:0070417 GO:0070482 GO:0080090 GO:0090568 GO:0140030 GO:0140034 GO:1900109 GO:1900111 GO:1902275 GO:1905269 GO:2000026 GO:2000028 GO:2000241 GO:2001252

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD_Oberon fn3

Protein Analysis

739

Amino Acids

81.72

Weight (kDa)

6.19

Isoelectric Point (pI)

50.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD_Oberon	PF07227	141 - 261	1.4e-35	PHD - plant homeodomain finger protein
Fn3_VIN3	PF23376	350 - 438	1e-35	VIN3-like, fibronectin type-III domain
VIN3_C	PF23380	651 - 724	1.4e-39	VIN3-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008417)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30200 AT4G30200 AT4G30200 AT4G30200
fragaria_vesca	FvH4_4g08010 FvH4_4g08010
malus_domestica	MD13G1252500.v1.1 MD16G1256500.v1.1
prunus_persica	Prupe.1G084700_v2.0.a1
pyrus_communis	pycom13g22550 pycom16g21760
rosa_chinensis	RchiOBHm_Chr4g0401761
rosa_laevigata	RLG00000009127
rosa_multiflora	Rmu_co8300969.1_g000001 Rmu_sc0001405.1_g000016
rosa_roxburghii	Rroxscaffold_5G00346250
rosa_rugosa	Rorug04G0032100 Rorug04G0032200
rosa_samantha	Rh4AG109000 Rh4BG102800 Rh4CG117300 Rh4DG100500
rosa_wichuraiana	Rw4G008850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	110, 1140
AccB7I	CCANNNNNTGG	1 cut(s)	1745
AccI	GTMKAC	1 cut(s)	747
AccIII	TCCGGA	1 cut(s)	454
AciI	CCGC	4 cut(s)	551, 709, 866, 1910
AclWI	GGATC	6 cut(s)	151, 696, 709, 1016, 1620, 2105
AcoI	YGGCCR	4 cut(s)	3, 101, 307, 1002
AcsI	RAATTY	4 cut(s)	1116, 1705, 1828, 2030
AcuI	CTGAAG	3 cut(s)	138, 962, 1389
AcvI	CACGTG	1 cut(s)	107
AdeI	CACNNNGTG	1 cut(s)	110
AfaI	GTAC	4 cut(s)	946, 1017, 1247, 1318
AfiI	CCNNNNNNNGG	6 cut(s)	532, 560, 872, 1745, 1883, 2068
AflIII	ACRYGT	2 cut(s)	358, 498
AgsI	TTSAA	9 cut(s)	43, 851, 1255, 1270, 1278, 1578, 1640, 1679, 2163
AjnI	CCWGG	2 cut(s)	704, 2039
AjuI	GAANNNNNNNTTGG	2 cut(s)	1107, 1139
Alw21I	GWGCWC	1 cut(s)	225
AlwI	GGATC	6 cut(s)	151, 696, 709, 1016, 1620, 2105
AlwNI	CAGNNNCTG	1 cut(s)	1760
Ama87I	CYCGRG	2 cut(s)	520, 1643
Aor13HI	TCCGGA	1 cut(s)	454
AoxI	GGCC	4 cut(s)	3, 101, 307, 1002
ApeKI	GCWGC	3 cut(s)	48, 540, 1887
ApoI	RAATTY	4 cut(s)	1116, 1705, 1828, 2030
AspLEI	GCGC	1 cut(s)	1650
AspS9I	GGNCC	4 cut(s)	517, 863, 923, 1556
AsuHPI	GGTGA	5 cut(s)	275, 866, 1454, 1650, 1934
AvaI	CYCGRG	2 cut(s)	520, 1643
AvaII	GGWCC	4 cut(s)	517, 863, 923, 1556
AxyI	CCTNAGG	1 cut(s)	2064
BaeGI	GKGCMC	1 cut(s)	2187
BalI	TGGCCA	4 cut(s)	5, 103, 309, 1004
BamHI	GGATCC	1 cut(s)	701
BanI	GGYRCC	2 cut(s)	110, 1140
BbrPI	CACGTG	1 cut(s)	107
BbsI	GAAGAC	1 cut(s)	1686
Bbv12I	GWGCWC	1 cut(s)	225
BbvI	GCAGC	3 cut(s)	60, 552, 1899
BccI	CCATC	7 cut(s)	355, 647, 883, 1600, 1778, 1796, 1877
BceAI	ACGGC	2 cut(s)	123, 538
BcgI	CGANNNNNNTGC	2 cut(s)	2096, 2130
BciT130I	CCWGG	2 cut(s)	706, 2041
BciVI	GTATCC	1 cut(s)	727
BclI	TGATCA	2 cut(s)	34, 1444
BfaI	CTAG	4 cut(s)	404, 719, 1623, 1808
BfmI	CTRYAG	3 cut(s)	1239, 1381, 1560
BfuI	GTATCC	1 cut(s)	727
BisI	GCNGC	4 cut(s)	49, 541, 551, 1888
BlsI	GCNGC	4 cut(s)	50, 542, 552, 1889
BmcAI	AGTACT	2 cut(s)	1247, 1318
Bme1390I	CCNGG	2 cut(s)	706, 2041
Bme18I	GGWCC	4 cut(s)	517, 863, 923, 1556
BmeT110I	CYCGRG	2 cut(s)	520, 1643
BmgT120I	GGNCC	4 cut(s)	517, 863, 923, 1556
BmiI	GGNNCC	8 cut(s)	112, 137, 519, 703, 864, 1142, 1615, 1875
BmrFI	CCNGG	2 cut(s)	706, 2041
BmrI	ACTGGG	2 cut(s)	1364, 1869
BmsI	GCATC	3 cut(s)	451, 498, 2126
BmuI	ACTGGG	2 cut(s)	1364, 1869
BpiI	GAAGAC	1 cut(s)	1686
BpmI	CTGGAG	3 cut(s)	1023, 1218, 1344
BpuEI	CTTGAG	4 cut(s)	611, 773, 793, 2071
BsaAI	YACGTR	2 cut(s)	107, 1972
BsaJI	CCNNGG	1 cut(s)	6
BsaWI	WCCGGW	2 cut(s)	454, 1143
BsaXI	ACNNNNNCTCC	4 cut(s)	649, 679, 1317, 1347
Bsc4I	CCNNNNNNNGG	6 cut(s)	532, 560, 872, 1745, 1883, 2068
Bse1I	ACTGG	9 cut(s)	199, 310, 877, 969, 1228, 1370, 1726, 1833, 1864
Bse21I	CCTNAGG	1 cut(s)	2064
Bse3DI	GCAATG	1 cut(s)	989
BseAI	TCCGGA	1 cut(s)	454
BseBI	CCWGG	2 cut(s)	706, 2041
BseDI	CCNNGG	1 cut(s)	6
BseGI	GGATG	4 cut(s)	274, 835, 1066, 1611
BseLI	CCNNNNNNNGG	6 cut(s)	532, 560, 872, 1745, 1883, 2068
BseMI	GCAATG	1 cut(s)	989
BseMII	CTCAG	7 cut(s)	330, 444, 537, 1125, 1767, 2078, 2163
BseNI	ACTGG	9 cut(s)	199, 310, 877, 969, 1228, 1370, 1726, 1833, 1864
BseRI	GAGGAG	1 cut(s)	1940
BseSI	GKGCMC	1 cut(s)	2187
BseXI	GCAGC	3 cut(s)	60, 552, 1899
BsgI	GTGCAG	1 cut(s)	186
BshFI	GGCC	4 cut(s)	5, 103, 309, 1004
BshNI	GGYRCC	2 cut(s)	110, 1140
BsiHKAI	GWGCWC	1 cut(s)	225
BsiHKCI	CYCGRG	2 cut(s)	520, 1643
BsiSI	CCGG	2 cut(s)	455, 1144
BslFI	GGGAC	5 cut(s)	660, 808, 1319, 1721, 1870
BslI	CCNNNNNNNGG	6 cut(s)	532, 560, 872, 1745, 1883, 2068
BsmFI	GGGAC	5 cut(s)	660, 808, 1319, 1721, 1870
BsnI	GGCC	4 cut(s)	5, 103, 309, 1004
BsoBI	CYCGRG	2 cut(s)	520, 1643
Bsp1286I	GDGCHC	2 cut(s)	225, 2187
Bsp13I	TCCGGA	1 cut(s)	454
Bsp1407I	TGTACA	2 cut(s)	944, 1015
Bsp143I	GATC	8 cut(s)	34, 156, 701, 1021, 1444, 1625, 1823, 2110
BspACI	CCGC	4 cut(s)	551, 709, 866, 1910
BspANI	GGCC	4 cut(s)	5, 103, 309, 1004
BspCNI	CTCAG	7 cut(s)	331, 443, 538, 1124, 1766, 2077, 2162
BspEI	TCCGGA	1 cut(s)	454
BspHI	TCATGA	1 cut(s)	817
BspLI	GGNNCC	8 cut(s)	112, 137, 519, 703, 864, 1142, 1615, 1875
BspPI	GGATC	6 cut(s)	151, 696, 709, 1016, 1620, 2105
BspT107I	GGYRCC	2 cut(s)	110, 1140
BsrDI	GCAATG	1 cut(s)	989
BsrGI	TGTACA	2 cut(s)	944, 1015
BsrI	ACTGG	9 cut(s)	199, 310, 877, 969, 1228, 1370, 1726, 1833, 1864
BssECI	CCNNGG	1 cut(s)	6
BssMI	GATC	8 cut(s)	34, 156, 701, 1021, 1444, 1625, 1823, 2110
Bst2UI	CCWGG	2 cut(s)	706, 2041
Bst4CI	ACNGT	7 cut(s)	129, 291, 756, 1084, 1191, 1250, 1504
BstAPI	GCANNNNNTGC	2 cut(s)	582, 2123
BstAUI	TGTACA	2 cut(s)	944, 1015
BstBAI	YACGTR	2 cut(s)	107, 1972
BstC8I	GCNNGC	4 cut(s)	436, 1652, 1762, 2124
BstDEI	CTNAG	7 cut(s)	339, 430, 546, 1111, 1753, 2064, 2149
BstDSI	CCRYGG	1 cut(s)	6
BstF5I	GGATG	4 cut(s)	274, 835, 1066, 1611
BstHHI	GCGC	1 cut(s)	1650
BstKTI	GATC	8 cut(s)	37, 159, 704, 1024, 1447, 1628, 1826, 2113
BstMBI	GATC	8 cut(s)	34, 156, 701, 1021, 1444, 1625, 1823, 2110
BstMWI	GCNNNNNNNGC	7 cut(s)	413, 440, 582, 715, 2011, 2123, 2128
BstNI	CCWGG	2 cut(s)	706, 2041
BstNSI	RCATGY	4 cut(s)	362, 502, 580, 1294
BstSCI	CCNGG	2 cut(s)	704, 2039
BstSFI	CTRYAG	3 cut(s)	1239, 1381, 1560
BstSLI	GKGCMC	1 cut(s)	2187
BstV1I	GCAGC	3 cut(s)	60, 552, 1899
BstV2I	GAAGAC	1 cut(s)	1686
BstX2I	RGATCY	5 cut(s)	156, 701, 1021, 1625, 2110
BstXI	CCANNNNNNTGG	2 cut(s)	1546, 1606
BstYI	RGATCY	5 cut(s)	156, 701, 1021, 1625, 2110
Bsu36I	CCTNAGG	1 cut(s)	2064
BsuI	GTATCC	1 cut(s)	727
BsuRI	GGCC	4 cut(s)	5, 103, 309, 1004
BtgI	CCRYGG	1 cut(s)	6
BtgZI	GCGATG	2 cut(s)	1059, 2103
BtsCI	GGATG	4 cut(s)	274, 835, 1066, 1611
BtsI	GCAGTG	1 cut(s)	1179
BtsIMutI	CAGTG	9 cut(s)	303, 962, 1080, 1179, 1187, 1221, 1413, 1491, 1689
Cac8I	GCNNGC	4 cut(s)	436, 1652, 1762, 2124
CaiI	CAGNNNCTG	1 cut(s)	1760
CciI	TCATGA	1 cut(s)	817
CfoI	GCGC	1 cut(s)	1650
Cfr13I	GGNCC	4 cut(s)	517, 863, 923, 1556
CsiI	ACCWGGT	1 cut(s)	2039
Csp6I	GTAC	4 cut(s)	945, 1016, 1246, 1317
CviQI	GTAC	4 cut(s)	945, 1016, 1246, 1317
DdeI	CTNAG	7 cut(s)	339, 430, 546, 1111, 1753, 2064, 2149
DpnI	GATC	8 cut(s)	36, 158, 703, 1023, 1446, 1627, 1825, 2112
DpnII	GATC	8 cut(s)	34, 156, 701, 1021, 1444, 1625, 1823, 2110
DraI	TTTAAA	2 cut(s)	603, 1848
DraIII	CACNNNGTG	1 cut(s)	110
EaeI	YGGCCR	4 cut(s)	3, 101, 307, 1002
EciI	GGCGGA	1 cut(s)	724
Eco47I	GGWCC	4 cut(s)	517, 863, 923, 1556
Eco57I	CTGAAG	3 cut(s)	138, 962, 1389
Eco72I	CACGTG	1 cut(s)	107
Eco81I	CCTNAGG	1 cut(s)	2064
Eco88I	CYCGRG	2 cut(s)	520, 1643
EcoO109I	RGGNCCY	2 cut(s)	517, 1556
EcoRII	CCWGG	2 cut(s)	704, 2039
EcoT22I	ATGCAT	2 cut(s)	418, 466
FaqI	GGGAC	5 cut(s)	660, 808, 1319, 1721, 1870
FbaI	TGATCA	2 cut(s)	34, 1444
FblI	GTMKAC	1 cut(s)	747
Fnu4HI	GCNGC	4 cut(s)	49, 541, 551, 1888
FokI	GGATG	4 cut(s)	281, 842, 1073, 1618
Fsp4HI	GCNGC	4 cut(s)	49, 541, 551, 1888
FspBI	CTAG	4 cut(s)	404, 719, 1623, 1808
GlaI	GCGC	1 cut(s)	1649
GluI	GCNGC	4 cut(s)	49, 541, 551, 1888
GsuI	CTGGAG	3 cut(s)	1023, 1218, 1344
HaeIII	GGCC	4 cut(s)	5, 103, 309, 1004
HapII	CCGG	2 cut(s)	455, 1144
HhaI	GCGC	1 cut(s)	1650
Hin6I	GCGC	1 cut(s)	1648
HinP1I	GCGC	1 cut(s)	1648
HincII	GTYRAC	2 cut(s)	907, 2140
HindII	GTYRAC	2 cut(s)	907, 2140
HindIII	AAGCTT	4 cut(s)	782, 812, 845, 2204
HinfI	GANTC	8 cut(s)	11, 343, 775, 931, 959, 968, 1274, 1946
HpaI	GTTAAC	1 cut(s)	907
HpaII	CCGG	2 cut(s)	455, 1144
HphI	GGTGA	5 cut(s)	275, 866, 1454, 1650, 1934
Hpy166II	GTNNAC	3 cut(s)	748, 907, 2140
Hpy8I	GTNNAC	3 cut(s)	748, 907, 2140
HpyAV	CCTTC	5 cut(s)	236, 1141, 1410, 1806, 2155
HpyCH4III	ACNGT	7 cut(s)	129, 291, 756, 1084, 1191, 1250, 1504
HpyCH4IV	ACGT	3 cut(s)	106, 640, 1971
HpyF10VI	GCNNNNNNNGC	7 cut(s)	413, 440, 582, 715, 2011, 2123, 2128
HpyF3I	CTNAG	7 cut(s)	339, 430, 546, 1111, 1753, 2064, 2149
HpySE526I	ACGT	3 cut(s)	106, 640, 1971
HspAI	GCGC	1 cut(s)	1648
Kpn2I	TCCGGA	1 cut(s)	454
Ksp22I	TGATCA	2 cut(s)	34, 1444
KspAI	GTTAAC	1 cut(s)	907
Kzo9I	GATC	8 cut(s)	34, 156, 701, 1021, 1444, 1625, 1823, 2110
LmnI	GCTCC	4 cut(s)	135, 657, 1042, 1619
Lsp1109I	GCAGC	3 cut(s)	60, 552, 1899
LweI	GCATC	3 cut(s)	451, 498, 2126
MabI	ACCWGGT	1 cut(s)	2039
MaeI	CTAG	4 cut(s)	404, 719, 1623, 1808
MaeII	ACGT	3 cut(s)	106, 640, 1971
MalI	GATC	8 cut(s)	36, 158, 703, 1023, 1446, 1627, 1825, 2112
MboI	GATC	8 cut(s)	34, 156, 701, 1021, 1444, 1625, 1823, 2110
MboII	GAAGA	9 cut(s)	6, 470, 853, 909, 1395, 1424, 1691, 1987, 2120
MflI	RGATCY	5 cut(s)	156, 701, 1021, 1625, 2110
MhlI	GDGCHC	2 cut(s)	225, 2187
MlsI	TGGCCA	4 cut(s)	5, 103, 309, 1004
MluNI	TGGCCA	4 cut(s)	5, 103, 309, 1004
MlyI	GAGTC	2 cut(s)	784, 968
MmeI	TCCRAC	2 cut(s)	1193, 2047
Mox20I	TGGCCA	4 cut(s)	5, 103, 309, 1004
Mph1103I	ATGCAT	2 cut(s)	418, 466
MroI	TCCGGA	1 cut(s)	454
MscI	TGGCCA	4 cut(s)	5, 103, 309, 1004
MseI	TTAA	8 cut(s)	56, 282, 449, 602, 884, 906, 1797, 1847
MslI	CAYNNNNRTG	1 cut(s)	1599
Msp20I	TGGCCA	4 cut(s)	5, 103, 309, 1004
MspI	CCGG	2 cut(s)	455, 1144
MspR9I	CCNGG	2 cut(s)	706, 2041
MvaI	CCWGG	2 cut(s)	706, 2041
MwoI	GCNNNNNNNGC	7 cut(s)	413, 440, 582, 715, 2011, 2123, 2128
NdeII	GATC	8 cut(s)	34, 156, 701, 1021, 1444, 1625, 1823, 2110
NlaIV	GGNNCC	8 cut(s)	112, 137, 519, 703, 864, 1142, 1615, 1875
NmeAIII	GCCGAG	1 cut(s)	331
NmuCI	GTSAC	5 cut(s)	398, 960, 1219, 1258, 1933
NsiI	ATGCAT	2 cut(s)	418, 466
NspI	RCATGY	4 cut(s)	362, 502, 580, 1294
PaeR7I	CTCGAG	1 cut(s)	1643
PagI	TCATGA	1 cut(s)	817
PciI	ACATGT	2 cut(s)	358, 498
PfeI	GAWTC	6 cut(s)	11, 343, 931, 968, 1274, 1946
PflMI	CCANNNNNTGG	1 cut(s)	1745
PkrI	GCNGC	4 cut(s)	50, 542, 552, 1889
PleI	GAGTC	2 cut(s)	783, 967
PmaCI	CACGTG	1 cut(s)	107
PmlI	CACGTG	1 cut(s)	107
PpsI	GAGTC	2 cut(s)	783, 967
Ppu21I	YACGTR	2 cut(s)	107, 1972
PpuMI	RGGWCCY	2 cut(s)	517, 1556
PscI	ACATGT	2 cut(s)	358, 498
Psp5II	RGGWCCY	2 cut(s)	517, 1556
Psp6I	CCWGG	2 cut(s)	704, 2039
PspCI	CACGTG	1 cut(s)	107
PspGI	CCWGG	2 cut(s)	704, 2039
PspN4I	GGNNCC	8 cut(s)	112, 137, 519, 703, 864, 1142, 1615, 1875
PspPI	GGNCC	4 cut(s)	517, 863, 923, 1556
PspPPI	RGGWCCY	2 cut(s)	517, 1556
PspXI	VCTCGAGB	1 cut(s)	1643
PstNI	CAGNNNCTG	1 cut(s)	1760
PsuI	RGATCY	5 cut(s)	156, 701, 1021, 1625, 2110
RsaI	GTAC	4 cut(s)	946, 1017, 1247, 1318
RsaNI	GTAC	4 cut(s)	945, 1016, 1246, 1317
RseI	CAYNNNNRTG	1 cut(s)	1599
SaqAI	TTAA	8 cut(s)	56, 282, 449, 602, 884, 906, 1797, 1847
SatI	GCNGC	4 cut(s)	49, 541, 551, 1888
Sau3AI	GATC	8 cut(s)	34, 156, 701, 1021, 1444, 1625, 1823, 2110
Sau96I	GGNCC	4 cut(s)	517, 863, 923, 1556
ScaI	AGTACT	2 cut(s)	1247, 1318
SchI	GAGTC	2 cut(s)	784, 968
ScrFI	CCNGG	2 cut(s)	706, 2041
SduI	GDGCHC	2 cut(s)	225, 2187
SexAI	ACCWGGT	1 cut(s)	2039
SfaNI	GCATC	3 cut(s)	451, 498, 2126
SfcI	CTRYAG	3 cut(s)	1239, 1381, 1560
Sfr274I	CTCGAG	1 cut(s)	1643
SinI	GGWCC	4 cut(s)	517, 863, 923, 1556
SlaI	CTCGAG	1 cut(s)	1643
SmiMI	CAYNNNNRTG	1 cut(s)	1599
SmlI	CTYRAG	5 cut(s)	590, 772, 788, 1643, 2050
SmoI	CTYRAG	5 cut(s)	590, 772, 788, 1643, 2050
SsiI	CCGC	4 cut(s)	551, 709, 866, 1910
SspI	AATATT	1 cut(s)	1429
SspMI	CTAG	4 cut(s)	404, 719, 1623, 1808
StyD4I	CCNGG	2 cut(s)	704, 2039
TaaI	ACNGT	7 cut(s)	129, 291, 756, 1084, 1191, 1250, 1504
TaiI	ACGT	3 cut(s)	109, 643, 1974
TaqI	TCGA	6 cut(s)	558, 1644, 1717, 1788, 2010, 2106
TatI	WGTACW	4 cut(s)	944, 1015, 1245, 1316
TauI	GCSGC	1 cut(s)	553
TfiI	GAWTC	6 cut(s)	11, 343, 931, 968, 1274, 1946
Tru1I	TTAA	8 cut(s)	56, 282, 449, 602, 884, 906, 1797, 1847
Tru9I	TTAA	8 cut(s)	56, 282, 449, 602, 884, 906, 1797, 1847
TscAI	CASTG	9 cut(s)	310, 969, 1087, 1186, 1194, 1228, 1413, 1498, 1696
TseFI	GTSAC	5 cut(s)	398, 960, 1219, 1258, 1933
TseI	GCWGC	3 cut(s)	48, 540, 1887
Tsp45I	GTSAC	5 cut(s)	398, 960, 1219, 1258, 1933
TspDTI	ATGAA	8 cut(s)	102, 558, 806, 854, 1175, 1344, 1431, 2216
TspGWI	ACGGA	2 cut(s)	23, 36
TspRI	CASTG	9 cut(s)	310, 969, 1087, 1186, 1194, 1228, 1413, 1498, 1696
Van91I	CCANNNNNTGG	1 cut(s)	1745
VpaK11BI	GGWCC	4 cut(s)	517, 863, 923, 1556
XapI	RAATTY	4 cut(s)	1116, 1705, 1828, 2030
XbaI	TCTAGA	1 cut(s)	1622
XceI	RCATGY	4 cut(s)	362, 502, 580, 1294
XhoI	CTCGAG	1 cut(s)	1643
XmiI	GTMKAC	1 cut(s)	747
XspI	CTAG	4 cut(s)	404, 719, 1623, 1808
ZrmI	AGTACT	2 cut(s)	1247, 1318
Zsp2I	ATGCAT	2 cut(s)	418, 466

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.