Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0014203

Physical Location & Seq

Genomic Coordinates Reverse (-)

14932105 .. 14934528

Gene Structure 2424 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G30580.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1071 bp

ATGGATGTCGCTTCTGCTCGGAGCATCTCTTCACATCCTTCATATTATGGAAAACCGATTTGTTCATCACAATCATCGTTGATTCGGATTTCGAGGGATAAAGTTTGTTGCTTTGGTCGCATTTCTAATGGCATGACGAGCTTTACTACTTCCCTTCATGCTGTCCCGAGTGAAAAATTTATGGGCGAAACAAGACGTACTGGCATTCAATGGTCTAACCGCTCTTTAAGACATGATCCTTACAGATTTCTTGATAAGAAATCACCTAGATCAAGTCAATTGGCAAGAGATATCACTGTGAGAGCAGATCTTTCAGGAGCTGCAACCCCTGACTCTTCTTTTCCTGAACCAGAGATTAAGTTGAGCTCAAGACTCAGAGGGATATTCTTTTGTGTTGTTGCTGGCATTTCGGCTACTTTTCTCATTGTCCTGATGATTATTGGGCATCCGTTCGTCCTTCTCTTCGATCCCTATAGGAGAAAATTCCACCACTTCATTGCTAAACTTTGGGCTTCCATAAGCATTTATCCGTTTTACAAAATCAACATCGAGGGTTTGGAGAATCTGCCATCATCAGACACTCCTGCTGTATATGTTTCAAACCACCAAAGTTTTCTGGATATCTACACACTTCTTAGTCTTGGAAAAAGCTTTAAGTTCATCAGCAAGACAGGGATATTCGTAATTCCCATCATCGGTTGGGCCATGTCCATGATGGGTGTCGTTCCCTTGAAGCGGATGGACCCAAGAAGCCAAGTGGATTGCTTAAAACGCTGCATGGAACTTTTAAAGAAGGGAGCATCTGTGTTTTTCTTCCCAGAAGGAACACGGAGTAAGGATGGTCGGTTAGGTTCTTTCAAGAAAGGCGCATTTACAGTGGCTGCGAAGACCGGAGTTGCAGTAGTTCCAATAACGCTAATGGGAACAGGCAAAATCATGCCAACGGGTAGTGAAGGTATACTGAACCATGGGAATGTGAGAGTTATCATCCATAAACCAATACATGGAAGCAAAGCGGATGTTCTTTGCAACGAGGCCAGAAGCAAGATTGCAGAATCAATGGATCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0006644 GO:0006650 GO:0006655 GO:0006793 GO:0006796 GO:0007275 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009507 GO:0009526 GO:0009536 GO:0009790 GO:0009791 GO:0009793 GO:0009941 GO:0009987 GO:0010154 GO:0019637 GO:0022414 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046471 GO:0046474 GO:0046486 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090407 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 map00561 map00564 map01100 map01110

Pfam Domains

Protein Families

Acyltransferase

Protein Analysis

356

Amino Acids

39.39

Weight (kDa)

9.87

Isoelectric Point (pI)

40.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acyltransferase	PF01553	180 - 306	3.8e-31	Acyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014203)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30580
fragaria_vesca	FvH4_1g00880 FvH4_1g00880
malus_domestica	MD02G1007100.v1.1 MD15G1144400.v1.1
prunus_persica	Prupe.7G263300_v2.0.a1 Prupe.7G263300_v2.0.a1
pyrus_communis	pycom02g00600 pycom15g13590
rosa_chinensis	RchiOBHm_Chr2g0085591
rosa_multiflora	Rmu_sc0006059.1_g000018 Rmu_sc0016087.1_g000004
rosa_roxburghii	Rroxscaffold_2G00155240
rosa_rugosa	Rorug01G0022900
rosa_samantha	Rh2AG010700 Rh2DG013100
rosa_wichuraiana	Rw2G000950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1004
AccBSI	CCGCTC	1 cut(s)	222
AccI	GTMKAC	1 cut(s)	958
AciI	CCGC	3 cut(s)	220, 736, 1016
AclWI	GGATC	2 cut(s)	230, 461
AcsI	RAATTY	2 cut(s)	176, 482
AfaI	GTAC	1 cut(s)	199
AfiI	CCNNNNNNNGG	3 cut(s)	695, 735, 1004
AgsI	TTSAA	4 cut(s)	209, 600, 733, 859
AluBI	AGCT	4 cut(s)	141, 320, 366, 651
AluI	AGCT	4 cut(s)	141, 320, 366, 651
Alw21I	GWGCWC	1 cut(s)	368
AlwI	GGATC	2 cut(s)	230, 461
AlwNI	CAGNNNCTG	2 cut(s)	320, 881
Ama87I	CYCGRG	1 cut(s)	166
AoxI	GGCC	2 cut(s)	702, 1035
ApeKI	GCWGC	3 cut(s)	320, 774, 881
ApoI	RAATTY	2 cut(s)	176, 482
AspLEI	GCGC	1 cut(s)	869
AspS9I	GGNCC	2 cut(s)	702, 742
AsuHPI	GGTGA	1 cut(s)	255
AvaI	CYCGRG	1 cut(s)	166
AvaII	GGWCC	1 cut(s)	742
BanII	GRGCYC	1 cut(s)	368
BbsI	GAAGAC	1 cut(s)	893
Bbv12I	GWGCWC	1 cut(s)	368
BbvI	GCAGC	3 cut(s)	307, 761, 868
BccI	CCATC	5 cut(s)	577, 698, 709, 733, 833
BfaI	CTAG	1 cut(s)	267
BfmI	CTRYAG	1 cut(s)	472
BglII	AGATCT	1 cut(s)	307
BisI	GCNGC	3 cut(s)	321, 775, 882
BlsI	GCNGC	3 cut(s)	322, 776, 883
Bme18I	GGWCC	1 cut(s)	742
BmeT110I	CYCGRG	1 cut(s)	166
BmgT120I	GGNCC	2 cut(s)	702, 742
BmiI	GGNNCC	1 cut(s)	744
BmsI	GCATC	3 cut(s)	33, 454, 809
BpiI	GAAGAC	1 cut(s)	893
BpuEI	CTTGAG	1 cut(s)	352
BsaJI	CCNNGG	1 cut(s)	967
BsaWI	WCCGGW	1 cut(s)	890
BsaXI	ACNNNNNCTCC	4 cut(s)	789, 819, 885, 915
Bsc4I	CCNNNNNNNGG	3 cut(s)	695, 735, 1004
Bse1I	ACTGG	1 cut(s)	205
Bse3DI	GCAATG	1 cut(s)	495
BseDI	CCNNGG	1 cut(s)	967
BseGI	GGATG	7 cut(s)	10, 34, 445, 744, 844, 987, 1024
BseLI	CCNNNNNNNGG	3 cut(s)	695, 735, 1004
BseMI	GCAATG	1 cut(s)	495
BseMII	CTCAG	1 cut(s)	388
BseNI	ACTGG	1 cut(s)	205
BseXI	GCAGC	3 cut(s)	307, 761, 868
BshFI	GGCC	2 cut(s)	704, 1037
BsiHKAI	GWGCWC	1 cut(s)	368
BsiHKCI	CYCGRG	1 cut(s)	166
BsiSI	CCGG	1 cut(s)	891
BslFI	GGGAC	1 cut(s)	149
BslI	CCNNNNNNNGG	3 cut(s)	695, 735, 1004
BsmFI	GGGAC	1 cut(s)	149
BsmI	GAATGC	1 cut(s)	204
BsnI	GGCC	2 cut(s)	704, 1037
BsoBI	CYCGRG	1 cut(s)	166
Bsp1286I	GDGCHC	1 cut(s)	368
Bsp143I	GATC	5 cut(s)	235, 269, 307, 466, 1063
Bsp19I	CCATGG	1 cut(s)	967
BspACI	CCGC	3 cut(s)	220, 736, 1016
BspANI	GGCC	2 cut(s)	704, 1037
BspCNI	CTCAG	1 cut(s)	387
BspLI	GGNNCC	1 cut(s)	744
BspPI	GGATC	2 cut(s)	230, 461
BsrBI	CCGCTC	1 cut(s)	222
BsrDI	GCAATG	1 cut(s)	495
BsrI	ACTGG	1 cut(s)	205
BssECI	CCNNGG	1 cut(s)	967
BssMI	GATC	5 cut(s)	235, 269, 307, 466, 1063
BssNAI	GTATAC	1 cut(s)	959
BssT1I	CCWWGG	1 cut(s)	967
Bst1107I	GTATAC	1 cut(s)	959
Bst4CI	ACNGT	2 cut(s)	298, 877
Bst6I	CTCTTC	3 cut(s)	34, 340, 467
BstC8I	GCNNGC	1 cut(s)	403
BstDEI	CTNAG	2 cut(s)	374, 635
BstDSI	CCRYGG	1 cut(s)	967
BstF5I	GGATG	7 cut(s)	10, 34, 445, 744, 844, 987, 1024
BstHHI	GCGC	1 cut(s)	869
BstKTI	GATC	5 cut(s)	238, 272, 310, 469, 1066
BstMBI	GATC	5 cut(s)	235, 269, 307, 466, 1063
BstMWI	GCNNNNNNNGC	3 cut(s)	117, 138, 771
BstSFI	CTRYAG	1 cut(s)	472
BstV1I	GCAGC	3 cut(s)	307, 761, 868
BstV2I	GAAGAC	1 cut(s)	893
BstX2I	RGATCY	2 cut(s)	307, 1063
BstYI	RGATCY	2 cut(s)	307, 1063
BstZ17I	GTATAC	1 cut(s)	959
BsuRI	GGCC	2 cut(s)	704, 1037
BtgI	CCRYGG	1 cut(s)	967
BtsCI	GGATG	7 cut(s)	10, 34, 445, 744, 844, 987, 1024
BtsIMutI	CAGTG	2 cut(s)	294, 882
Cac8I	GCNNGC	1 cut(s)	403
CaiI	CAGNNNCTG	2 cut(s)	320, 881
CfoI	GCGC	1 cut(s)	869
Cfr13I	GGNCC	2 cut(s)	702, 742
Csp6I	GTAC	1 cut(s)	198
CviAII	CATG	9 cut(s)	133, 158, 233, 706, 712, 778, 937, 968, 1004
CviQI	GTAC	1 cut(s)	198
DdeI	CTNAG	2 cut(s)	374, 635
DpnI	GATC	5 cut(s)	237, 271, 309, 468, 1065
DpnII	GATC	5 cut(s)	235, 269, 307, 466, 1063
DraI	TTTAAA	1 cut(s)	789
Eam1104I	CTCTTC	3 cut(s)	34, 340, 467
EarI	CTCTTC	3 cut(s)	34, 340, 467
Ecl136II	GAGCTC	1 cut(s)	366
Eco130I	CCWWGG	1 cut(s)	967
Eco24I	GRGCYC	1 cut(s)	368
Eco32I	GATATC	2 cut(s)	292, 622
Eco47I	GGWCC	1 cut(s)	742
Eco53kI	GAGCTC	1 cut(s)	366
Eco88I	CYCGRG	1 cut(s)	166
EcoICRI	GAGCTC	1 cut(s)	366
EcoRV	GATATC	2 cut(s)	292, 622
EcoT14I	CCWWGG	1 cut(s)	967
EcoT38I	GRGCYC	1 cut(s)	368
ErhI	CCWWGG	1 cut(s)	967
FaeI	CATG	9 cut(s)	136, 161, 236, 709, 715, 781, 940, 971, 1007
FaqI	GGGAC	1 cut(s)	149
FatI	CATG	9 cut(s)	132, 157, 232, 705, 711, 777, 936, 967, 1003
FblI	GTMKAC	1 cut(s)	958
Fnu4HI	GCNGC	3 cut(s)	321, 775, 882
FokI	GGATG	7 cut(s)	17, 21, 432, 751, 851, 974, 1031
FriOI	GRGCYC	1 cut(s)	368
Fsp4HI	GCNGC	3 cut(s)	321, 775, 882
FspBI	CTAG	1 cut(s)	267
GlaI	GCGC	1 cut(s)	868
GluI	GCNGC	3 cut(s)	321, 775, 882
HaeIII	GGCC	2 cut(s)	704, 1037
HapII	CCGG	1 cut(s)	891
HhaI	GCGC	1 cut(s)	869
Hin1II	CATG	9 cut(s)	136, 161, 236, 709, 715, 781, 940, 971, 1007
Hin6I	GCGC	1 cut(s)	867
HinP1I	GCGC	1 cut(s)	867
HindIII	AAGCTT	1 cut(s)	649
HinfI	GANTC	5 cut(s)	82, 332, 372, 562, 1055
HpaII	CCGG	1 cut(s)	891
HphI	GGTGA	1 cut(s)	255
Hpy166II	GTNNAC	1 cut(s)	959
Hpy188I	TCNGA	4 cut(s)	21, 87, 377, 577
Hpy188III	TCNNGA	8 cut(s)	166, 251, 315, 344, 369, 430, 617, 859
Hpy8I	GTNNAC	1 cut(s)	959
HpyAV	CCTTC	6 cut(s)	48, 164, 467, 787, 815, 947
HpyCH4III	ACNGT	2 cut(s)	298, 877
HpyCH4IV	ACGT	1 cut(s)	196
HpyCH4V	TGCA	5 cut(s)	323, 777, 899, 1029, 1052
HpyF10VI	GCNNNNNNNGC	3 cut(s)	117, 138, 771
HpyF3I	CTNAG	2 cut(s)	374, 635
HpySE526I	ACGT	1 cut(s)	196
Hsp92II	CATG	9 cut(s)	136, 161, 236, 709, 715, 781, 940, 971, 1007
HspAI	GCGC	1 cut(s)	867
Kzo9I	GATC	5 cut(s)	235, 269, 307, 466, 1063
LmnI	GCTCC	3 cut(s)	21, 317, 797
Lsp1109I	GCAGC	3 cut(s)	307, 761, 868
LweI	GCATC	3 cut(s)	33, 454, 809
MaeI	CTAG	1 cut(s)	267
MaeII	ACGT	1 cut(s)	196
MalI	GATC	5 cut(s)	237, 271, 309, 468, 1065
MbiI	CCGCTC	1 cut(s)	222
MboI	GATC	5 cut(s)	235, 269, 307, 466, 1063
MboII	GAAGA	5 cut(s)	21, 327, 454, 805, 898
MfeI	CAATTG	1 cut(s)	278
MflI	RGATCY	2 cut(s)	307, 1063
MhlI	GDGCHC	1 cut(s)	368
MluCI	AATT	4 cut(s)	176, 278, 482, 684
MlyI	GAGTC	2 cut(s)	326, 366
MnlI	CCTC	4 cut(s)	87, 371, 544, 1027
MseI	TTAA	5 cut(s)	227, 357, 654, 767, 788
MslI	CAYNNNNRTG	2 cut(s)	710, 972
MspI	CCGG	1 cut(s)	891
MunI	CAATTG	1 cut(s)	278
Mva1269I	GAATGC	1 cut(s)	204
MwoI	GCNNNNNNNGC	3 cut(s)	117, 138, 771
NcoI	CCATGG	1 cut(s)	967
NdeII	GATC	5 cut(s)	235, 269, 307, 466, 1063
NlaIII	CATG	9 cut(s)	136, 161, 236, 709, 715, 781, 940, 971, 1007
NlaIV	GGNNCC	1 cut(s)	744
PctI	GAATGC	1 cut(s)	204
PfeI	GAWTC	3 cut(s)	82, 562, 1055
PflMI	CCANNNNNTGG	1 cut(s)	1004
PkrI	GCNGC	3 cut(s)	322, 776, 883
PleI	GAGTC	2 cut(s)	326, 366
PpsI	GAGTC	2 cut(s)	326, 366
Psp124BI	GAGCTC	1 cut(s)	368
PspN4I	GGNNCC	1 cut(s)	744
PspPI	GGNCC	2 cut(s)	702, 742
PstNI	CAGNNNCTG	2 cut(s)	320, 881
PsuI	RGATCY	2 cut(s)	307, 1063
RsaI	GTAC	1 cut(s)	199
RsaNI	GTAC	1 cut(s)	198
RseI	CAYNNNNRTG	2 cut(s)	710, 972
SacI	GAGCTC	1 cut(s)	368
SaqAI	TTAA	5 cut(s)	227, 357, 654, 767, 788
SatI	GCNGC	3 cut(s)	321, 775, 882
Sau3AI	GATC	5 cut(s)	235, 269, 307, 466, 1063
Sau96I	GGNCC	2 cut(s)	702, 742
SchI	GAGTC	2 cut(s)	326, 366
SduI	GDGCHC	1 cut(s)	368
SetI	ASST	8 cut(s)	143, 199, 268, 322, 368, 653, 853, 958
SfaNI	GCATC	3 cut(s)	33, 454, 809
SfcI	CTRYAG	1 cut(s)	472
SinI	GGWCC	1 cut(s)	742
SmiMI	CAYNNNNRTG	2 cut(s)	710, 972
SmlI	CTYRAG	1 cut(s)	367
SmoI	CTYRAG	1 cut(s)	367
Sse9I	AATT	4 cut(s)	176, 278, 482, 684
SsiI	CCGC	3 cut(s)	220, 736, 1016
SspMI	CTAG	1 cut(s)	267
SstI	GAGCTC	1 cut(s)	368
StyI	CCWWGG	1 cut(s)	967
TaaI	ACNGT	2 cut(s)	298, 877
TaiI	ACGT	1 cut(s)	199
TaqI	TCGA	3 cut(s)	92, 465, 549
TasI	AATT	4 cut(s)	176, 278, 482, 684
TfiI	GAWTC	3 cut(s)	82, 562, 1055
Tru1I	TTAA	5 cut(s)	227, 357, 654, 767, 788
Tru9I	TTAA	5 cut(s)	227, 357, 654, 767, 788
TscAI	CASTG	2 cut(s)	301, 882
TseI	GCWGC	3 cut(s)	320, 774, 881
TspDTI	ATGAA	5 cut(s)	30, 54, 146, 484, 649
TspGWI	ACGGA	3 cut(s)	438, 519, 844
TspRI	CASTG	2 cut(s)	301, 882
Van91I	CCANNNNNTGG	1 cut(s)	1004
VpaK11BI	GGWCC	1 cut(s)	742
XapI	RAATTY	2 cut(s)	176, 482
XcmI	CCANNNNNNNNNTGG	1 cut(s)	712
XmiI	GTMKAC	1 cut(s)	958
XspI	CTAG	1 cut(s)	267

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.