Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0014203

Physical Location & Seq

Genomic Coordinates Reverse (-)

3820582 .. 3824073

Gene Structure 3492 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0022900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1923 bp

ATGAAAGTTGTTAAGCATGATGAGAGGAAGAAGAGCAGCCCGGCCCCGACACCATTGGTGGTGGTCGGCGGCGGCTCTGCCACTAACTCCGGCGGCCCTTTCCGGCCACCTCCGGGGATCAAAAATATGTGGCTTTGTGTGGTCATGGGCGAAGATCCGACCGTTGGATCTTCGTATAAATGCAAAACAGTGATTAGGGAGGCGATTCGTGAGAATCCGTCCGTCGGATTTTCGTATAAATTTGTGAAGATGTTAGTAAGGACGATTCAGGAAGATCCGACCGTGATTGACGGTCTCCCTTGGGTGAACGATTTCGGTGTGTATTGTGTTGAATTGAAGACGCAGCGGGAATATCGAGCGGGTAATCCTACAGGTCAGGAGAATCAGGACGGTGATCGTGCGGGGGAAGTGATGCTGACGGCAGAAAAATTAAGGGTGTTTCCTTACCTTGAGGAGCTGACCTTGGAGCAGTGTAAGCAATTGAGAAGTGCTCCCAGTCATTTTCCATCTCTCAAGAAGTTGGTGATACGAGAAGTGGAAAGTGGTATGCCTATAGCAAGTATTTTAAGCAATAAACTGACTACTCTCACTTATCTCGAAGTAGATGGTGTCAAGGGACTTACTAGTCTTCCAGAAGGGATGTTAAGAAACAACAAGAATCTTAAATGTTTGAAAATCGGCAACTGTCCGGAGTTAAGCTGCATTGCTCCCCATGGATTTGACTGCTGCGCATCTCTTGAGAGTCTGACTATTTGGGAGTGTCCTAAGTTGAGGTATTTATCTGATGGGCTACTCTCACTCTCTCTCAAGGAGTTGGGCATACAAAATTGCTCCAGTCTAGAGTCCATTCCAATCATCCCTGAGGAAGGCGGTCTCGCATCCCTGCGCACATTGTGGATATTCGAGTGTTCTCTTCGAAATTTACCTGATGGGCTACAATACTGCACATCTCTTCGAAATTTGCTAATAGACAGCTGCCCAGAGATAACGTCCATTCCAATTCCATCTGCGGGCCTCCCGTCCCTTGGTCAACTGGTGCTTATGCAGTGTCCTGAATTATCAAGCCTACCGAGTGGACTAGGGTGCTGCACCTCTCTTGATGATTTGACAATGATAGGGTGCCCTAAGGTAACATCCATTCCAATTGGCAGTCTCAGTACAACACTCAGATGCTTGGCTGTAAGTAATCTAGAGTCTCTTCCAATTTTACACGGCGGCTTCACATCCCTCCGTCAATTGGGAATCGACGGCTGTCAAAGTACACAAATTGATCTGCAATTTTGTCAAATCCTCGTCTCTCTTGAGGATTTGAGAATAAGTGATTGTCCTAATCTAGAGACTGTTCCAAGTTTAGACAAGCTCACATCCCTCCGTCAGTTGTGGATTAGAGATTGTTCCCGATTGACATGTCTACCCAGTGGGTTAGCAATGGCATCCCCACACGTATTCACCCGTCTCGAGTCCTTGTCACTTGGTCCGTTTTGGAATGAGCTGGATTCATTCCCGGCACTTCAGGTTCTACCACAACTTGAATCATTGACGATCTACGGGTGGCCGAAGCTCAAGTCTCTGCCTGAACAAATTCAACACTTGACGTCTTTGACCGAATTGCGGATAGAGGACTTTGAGGGAGTGGAGGCTATTCCAGAATGGTTGGGAAACCTTGCATCTCTTCACTCCTTACATATTCGGAGTTGCAAGAATCTGATGTATCTACCTTCCGTCCAAGCTATGCAACGCCTCACCAAATTAGATTATCTGGAGATGTGGAATTGTCCCCTTTTGAGAGAAAGATGCACCGCGGAGAGCGGCCCAGAGTGGCCTAAGATTTCTCATATTCCATCCATCCATGGTAACTCTTTCCTCTACCTCTTTTCTGAATCGGTCAATATTCATATCACTTTAATTGTACTAGTTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0006644 GO:0006650 GO:0006655 GO:0006793 GO:0006796 GO:0007275 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009507 GO:0009526 GO:0009536 GO:0009790 GO:0009791 GO:0009793 GO:0009941 GO:0009987 GO:0010154 GO:0019637 GO:0022414 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046471 GO:0046474 GO:0046486 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090407 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 map00561 map00564 map01100 map01110

Pfam Domains

Protein Families

Acyltransferase

Protein Analysis

640

Amino Acids

70.65

Weight (kDa)

5.62

Isoelectric Point (pI)

49.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_R13L1-DRL21	PF25019	409 - 465	3.8e-06	R13L1/DRL21 LRRs
LRR_14	PF23598	507 - 590	4.4e-07	Leucine-rich repeat region
LRR_R13L1-DRL21	PF25019	526 - 586	3.5e-08	R13L1/DRL21 LRRs

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014203)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30580
fragaria_vesca	FvH4_1g00880 FvH4_1g00880
malus_domestica	MD02G1007100.v1.1 MD15G1144400.v1.1
prunus_persica	Prupe.7G263300_v2.0.a1 Prupe.7G263300_v2.0.a1
pyrus_communis	pycom02g00600 pycom15g13590
rosa_chinensis	RchiOBHm_Chr2g0085591
rosa_multiflora	Rmu_sc0006059.1_g000018 Rmu_sc0016087.1_g000004
rosa_roxburghii	Rroxscaffold_2G00155240
rosa_rugosa	Rorug01G0022900
rosa_samantha	Rh2AG010700 Rh2DG013100
rosa_wichuraiana	Rw2G000950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	624
AatII	GACGTC	1 cut(s)	1598
Acc16I	TGCGCA	2 cut(s)	730, 887
AccB1I	GGYRCC	1 cut(s)	1119
AccBSI	CCGCTC	2 cut(s)	359, 1809
AccI	GTMKAC	1 cut(s)	1411
AccII	CGCG	1 cut(s)	1802
AccIII	TCCGGA	1 cut(s)	688
AclWI	GGATC	4 cut(s)	125, 149, 175, 269
AcoI	YGGCCR	2 cut(s)	104, 1553
AcsI	RAATTY	4 cut(s)	239, 919, 958, 1581
AcuI	CTGAAG	1 cut(s)	1496
AcyI	GRCGYC	1 cut(s)	1595
AdeI	CACNNNGTG	1 cut(s)	894
AfaI	GTAC	3 cut(s)	1159, 1261, 1911
AfiI	CCNNNNNNNGG	8 cut(s)	113, 164, 224, 866, 1010, 1025, 1237, 1611
AflIII	ACRYGT	2 cut(s)	1406, 1441
AgsI	TTSAA	5 cut(s)	332, 337, 673, 1532, 1586
AhlI	ACTAGT	2 cut(s)	623, 1912
AluBI	AGCT	7 cut(s)	457, 699, 975, 1360, 1492, 1561, 1730
AluI	AGCT	7 cut(s)	457, 699, 975, 1360, 1492, 1561, 1730
Alw21I	GWGCWC	1 cut(s)	493
Alw26I	GTCTC	8 cut(s)	299, 878, 1157, 1200, 1300, 1331, 1460, 1572
AlwI	GGATC	4 cut(s)	125, 149, 175, 269
Ama87I	CYCGRG	1 cut(s)	1457
Aor13HI	TCCGGA	1 cut(s)	688
AoxI	GGCC	7 cut(s)	42, 94, 104, 1012, 1553, 1810, 1820
ApeKI	GCWGC	6 cut(s)	36, 343, 699, 726, 975, 1086
ApoI	RAATTY	4 cut(s)	239, 919, 958, 1581
ArsI	GACNNNNNNTTYG	2 cut(s)	1550, 1582
Asp700I	GAANNNNTTC	2 cut(s)	311, 1581
AspLEI	GCGC	2 cut(s)	731, 888
AspS9I	GGNCC	5 cut(s)	43, 95, 1012, 1475, 1811
AsuC2I	CCSGG	3 cut(s)	41, 114, 1505
AsuHPI	GGTGA	5 cut(s)	316, 404, 535, 1441, 1735
AsuII	TTCGAA	2 cut(s)	916, 955
AvaI	CYCGRG	1 cut(s)	1457
AvaII	GGWCC	1 cut(s)	1475
AxyI	CCTNAGG	2 cut(s)	861, 1125
BaeGI	GKGCMC	1 cut(s)	1124
BanI	GGYRCC	1 cut(s)	1119
BbsI	GAAGAC	2 cut(s)	344, 620
Bbv12I	GWGCWC	1 cut(s)	493
BbvI	GCAGC	6 cut(s)	48, 355, 686, 713, 962, 1073
BccI	CCATC	7 cut(s)	514, 599, 779, 923, 1012, 1849, 1853
BceAI	ACGGC	3 cut(s)	435, 1228, 1264
BcnI	CCSGG	3 cut(s)	41, 114, 1505
BcoDI	GTCTC	8 cut(s)	299, 878, 1157, 1200, 1300, 1331, 1460, 1572
BcuI	ACTAGT	2 cut(s)	623, 1912
BfaI	CTAG	6 cut(s)	624, 839, 1079, 1190, 1334, 1913
BfmI	CTRYAG	2 cut(s)	369, 552
Bme1390I	CCNGG	3 cut(s)	41, 114, 1505
Bme18I	GGWCC	1 cut(s)	1475
BmeT110I	CYCGRG	1 cut(s)	1457
BmgT120I	GGNCC	5 cut(s)	43, 95, 1012, 1475, 1811
BmiI	GGNNCC	2 cut(s)	45, 1121
BmrFI	CCNGG	3 cut(s)	41, 114, 1505
BmrI	ACTGGG	2 cut(s)	489, 1410
BmsI	GCATC	7 cut(s)	402, 740, 887, 1160, 1442, 1676, 1784
BmuI	ACTGGG	2 cut(s)	489, 1410
BoxI	GACNNNNGTC	1 cut(s)	1251
BpiI	GAAGAC	2 cut(s)	344, 620
BplI	GAGNNNNNCTC	2 cut(s)	475, 507
BpmI	CTGGAG	2 cut(s)	817, 1781
Bpu14I	TTCGAA	2 cut(s)	916, 955
BpuEI	CTTGAG	6 cut(s)	470, 497, 758, 791, 1322, 1547
BpuMI	CCSGG	3 cut(s)	41, 114, 1505
BsaAI	YACGTR	1 cut(s)	1444
BsaHI	GRCGYC	1 cut(s)	1595
BsaI	GGTCTC	2 cut(s)	299, 878
BsaJI	CCNNGG	7 cut(s)	113, 299, 462, 712, 1024, 1800, 1849
BsaWI	WCCGGW	1 cut(s)	688
Bsc4I	CCNNNNNNNGG	8 cut(s)	113, 164, 224, 866, 1010, 1025, 1237, 1611
Bse1I	ACTGG	4 cut(s)	495, 834, 1038, 1416
Bse21I	CCTNAGG	2 cut(s)	861, 1125
Bse3DI	GCAATG	2 cut(s)	702, 1434
BseAI	TCCGGA	1 cut(s)	688
BseDI	CCNNGG	7 cut(s)	113, 299, 462, 712, 1024, 1800, 1849
BseGI	GGATG	9 cut(s)	645, 855, 878, 1133, 1223, 1364, 1433, 1841, 1845
BseLI	CCNNNNNNNGG	8 cut(s)	113, 164, 224, 866, 1010, 1025, 1237, 1611
BseMI	GCAATG	2 cut(s)	702, 1434
BseMII	CTCAG	3 cut(s)	852, 1168, 1180
BseNI	ACTGG	4 cut(s)	495, 834, 1038, 1416
BseRI	GAGGAG	1 cut(s)	467
BseSI	GKGCMC	1 cut(s)	1124
BseXI	GCAGC	6 cut(s)	48, 355, 686, 713, 962, 1073
BsgI	GTGCAG	2 cut(s)	928, 1072
Bsh1236I	CGCG	1 cut(s)	1802
Bsh1285I	CGRYCG	2 cut(s)	162, 282
BshFI	GGCC	7 cut(s)	44, 96, 106, 1014, 1555, 1812, 1822
BshNI	GGYRCC	1 cut(s)	1119
BsiEI	CGRYCG	2 cut(s)	162, 282
BsiHKAI	GWGCWC	1 cut(s)	493
BsiHKCI	CYCGRG	1 cut(s)	1457
BsiSI	CCGG	6 cut(s)	41, 90, 103, 113, 689, 1505
BslFI	GGGAC	3 cut(s)	630, 1006, 1761
BslI	CCNNNNNNNGG	8 cut(s)	113, 164, 224, 866, 1010, 1025, 1237, 1611
BsmAI	GTCTC	8 cut(s)	299, 878, 1157, 1200, 1300, 1331, 1460, 1572
BsmBI	CGTCTC	2 cut(s)	1300, 1460
BsmFI	GGGAC	3 cut(s)	630, 1006, 1761
BsnI	GGCC	7 cut(s)	44, 96, 106, 1014, 1555, 1812, 1822
Bso31I	GGTCTC	2 cut(s)	299, 878
BsoBI	CYCGRG	1 cut(s)	1457
Bsp119I	TTCGAA	2 cut(s)	916, 955
Bsp1286I	GDGCHC	2 cut(s)	493, 1124
Bsp13I	TCCGGA	1 cut(s)	688
Bsp143I	GATC	7 cut(s)	117, 154, 167, 274, 394, 1270, 1542
Bsp19I	CCATGG	2 cut(s)	712, 1849
BspANI	GGCC	7 cut(s)	44, 96, 106, 1014, 1555, 1812, 1822
BspCNI	CTCAG	3 cut(s)	853, 1167, 1179
BspEI	TCCGGA	1 cut(s)	688
BspFNI	CGCG	1 cut(s)	1802
BspLI	GGNNCC	2 cut(s)	45, 1121
BspPI	GGATC	4 cut(s)	125, 149, 175, 269
BspQI	GCTCTTC	1 cut(s)	26
BspT104I	TTCGAA	2 cut(s)	916, 955
BspT107I	GGYRCC	1 cut(s)	1119
BspTNI	GGTCTC	2 cut(s)	299, 878
BsrBI	CCGCTC	2 cut(s)	359, 1809
BsrDI	GCAATG	2 cut(s)	702, 1434
BsrI	ACTGG	4 cut(s)	495, 834, 1038, 1416
BssECI	CCNNGG	7 cut(s)	113, 299, 462, 712, 1024, 1800, 1849
BssMI	GATC	7 cut(s)	117, 154, 167, 274, 394, 1270, 1542
BssNI	GRCGYC	1 cut(s)	1595
BssT1I	CCWWGG	5 cut(s)	299, 462, 712, 1024, 1849
Bst4CI	ACNGT	7 cut(s)	163, 190, 283, 293, 392, 686, 1342
Bst6I	CTCTTC	5 cut(s)	26, 918, 957, 1203, 1677
BstACI	GRCGYC	1 cut(s)	1595
BstBAI	YACGTR	1 cut(s)	1444
BstBI	TTCGAA	2 cut(s)	916, 955
BstC8I	GCNNGC	1 cut(s)	1012
BstDEI	CTNAG	6 cut(s)	765, 861, 1125, 1154, 1166, 1824
BstDSI	CCRYGG	3 cut(s)	712, 1800, 1849
BstENI	CCTNNNNNAGG	1 cut(s)	864
BstF5I	GGATG	9 cut(s)	645, 855, 878, 1133, 1223, 1364, 1433, 1841, 1845
BstFNI	CGCG	1 cut(s)	1802
BstHHI	GCGC	2 cut(s)	731, 888
BstKTI	GATC	7 cut(s)	120, 157, 170, 277, 397, 1273, 1545
BstMAI	GTCTC	8 cut(s)	299, 878, 1157, 1200, 1300, 1331, 1460, 1572
BstMBI	GATC	7 cut(s)	117, 154, 167, 274, 394, 1270, 1542
BstMCI	CGRYCG	2 cut(s)	162, 282
BstMWI	GCNNNNNNNGC	1 cut(s)	475
BstNSI	RCATGY	1 cut(s)	1410
BstPAI	GACNNNNGTC	1 cut(s)	1251
BstSCI	CCNGG	3 cut(s)	39, 112, 1503
BstSFI	CTRYAG	2 cut(s)	369, 552
BstSLI	GKGCMC	1 cut(s)	1124
BstUI	CGCG	1 cut(s)	1802
BstV1I	GCAGC	6 cut(s)	48, 355, 686, 713, 962, 1073
BstV2I	GAAGAC	2 cut(s)	344, 620
BstX2I	RGATCY	3 cut(s)	154, 167, 274
BstYI	RGATCY	3 cut(s)	154, 167, 274
Bsu36I	CCTNAGG	2 cut(s)	861, 1125
BsuRI	GGCC	7 cut(s)	44, 96, 106, 1014, 1555, 1812, 1822
BtgI	CCRYGG	3 cut(s)	712, 1800, 1849
BtsCI	GGATG	9 cut(s)	645, 855, 878, 1133, 1223, 1364, 1433, 1841, 1845
BtsI	GCAGTG	2 cut(s)	476, 1052
BtsIMutI	CAGTG	4 cut(s)	195, 476, 1052, 1423
Cac8I	GCNNGC	1 cut(s)	1012
CfoI	GCGC	2 cut(s)	731, 888
Cfr13I	GGNCC	5 cut(s)	43, 95, 1012, 1475, 1811
Cfr42I	CCGCGG	1 cut(s)	1803
CseI	GACGC	1 cut(s)	349
Csp6I	GTAC	3 cut(s)	1158, 1260, 1910
CviAII	CATG	5 cut(s)	17, 145, 713, 1407, 1850
CviQI	GTAC	3 cut(s)	1158, 1260, 1910
DdeI	CTNAG	6 cut(s)	765, 861, 1125, 1154, 1166, 1824
DpnI	GATC	7 cut(s)	119, 156, 169, 276, 396, 1272, 1544
DpnII	GATC	7 cut(s)	117, 154, 167, 274, 394, 1270, 1542
DraIII	CACNNNGTG	1 cut(s)	894
DrdI	GACNNNNNNGTC	1 cut(s)	624
DseDI	GACNNNNNNGTC	1 cut(s)	624
EaeI	YGGCCR	2 cut(s)	104, 1553
Eam1104I	CTCTTC	5 cut(s)	26, 918, 957, 1203, 1677
EarI	CTCTTC	5 cut(s)	26, 918, 957, 1203, 1677
Eco130I	CCWWGG	5 cut(s)	299, 462, 712, 1024, 1849
Eco31I	GGTCTC	2 cut(s)	299, 878
Eco47I	GGWCC	1 cut(s)	1475
Eco57I	CTGAAG	1 cut(s)	1496
Eco81I	CCTNAGG	2 cut(s)	861, 1125
Eco88I	CYCGRG	1 cut(s)	1457
EcoNI	CCTNNNNNAGG	1 cut(s)	864
EcoT14I	CCWWGG	5 cut(s)	299, 462, 712, 1024, 1849
ErhI	CCWWGG	5 cut(s)	299, 462, 712, 1024, 1849
Esp3I	CGTCTC	2 cut(s)	1300, 1460
FaeI	CATG	5 cut(s)	20, 148, 716, 1410, 1853
FaqI	GGGAC	3 cut(s)	630, 1006, 1761
FatI	CATG	5 cut(s)	16, 144, 712, 1406, 1849
FauI	CCCGC	4 cut(s)	339, 352, 394, 1003
FblI	GTMKAC	1 cut(s)	1411
FokI	GGATG	9 cut(s)	652, 842, 865, 1120, 1210, 1351, 1420, 1828, 1832
FspBI	CTAG	6 cut(s)	624, 839, 1079, 1190, 1334, 1913
FspI	TGCGCA	2 cut(s)	730, 887
GlaI	GCGC	2 cut(s)	730, 887
GsuI	CTGGAG	2 cut(s)	817, 1781
HaeIII	GGCC	7 cut(s)	44, 96, 106, 1014, 1555, 1812, 1822
HapII	CCGG	6 cut(s)	41, 90, 103, 113, 689, 1505
HgaI	GACGC	1 cut(s)	349
HhaI	GCGC	2 cut(s)	731, 888
Hin1I	GRCGYC	1 cut(s)	1595
Hin1II	CATG	5 cut(s)	20, 148, 716, 1410, 1853
Hin6I	GCGC	2 cut(s)	729, 886
HinP1I	GCGC	2 cut(s)	729, 886
HincII	GTYRAC	1 cut(s)	1031
HindII	GTYRAC	1 cut(s)	1031
HpaII	CCGG	6 cut(s)	41, 90, 103, 113, 689, 1505
HphI	GGTGA	5 cut(s)	316, 404, 535, 1441, 1735
Hpy166II	GTNNAC	5 cut(s)	307, 1031, 1076, 1262, 1412
Hpy188I	TCNGA	9 cut(s)	159, 227, 279, 747, 784, 1169, 1692, 1707, 1879
Hpy8I	GTNNAC	5 cut(s)	307, 1031, 1076, 1262, 1412
Hpy99I	CGWCG	2 cut(s)	227, 1250
HpyAV	CCTTC	3 cut(s)	629, 860, 1728
HpyCH4III	ACNGT	7 cut(s)	163, 190, 283, 293, 392, 686, 1342
HpyCH4IV	ACGT	3 cut(s)	989, 1443, 1595
HpyF10VI	GCNNNNNNNGC	1 cut(s)	475
HpyF3I	CTNAG	6 cut(s)	765, 861, 1125, 1154, 1166, 1824
HpySE526I	ACGT	3 cut(s)	989, 1443, 1595
Hsp92I	GRCGYC	1 cut(s)	1595
Hsp92II	CATG	5 cut(s)	20, 148, 716, 1410, 1853
HspAI	GCGC	2 cut(s)	729, 886
Kpn2I	TCCGGA	1 cut(s)	688
KspI	CCGCGG	1 cut(s)	1803
Kzo9I	GATC	7 cut(s)	117, 154, 167, 274, 394, 1270, 1542
LguI	GCTCTTC	1 cut(s)	26
LmnI	GCTCC	5 cut(s)	454, 466, 496, 712, 836
Lsp1109I	GCAGC	6 cut(s)	48, 355, 686, 713, 962, 1073
LweI	GCATC	7 cut(s)	402, 740, 887, 1160, 1442, 1676, 1784
MaeI	CTAG	6 cut(s)	624, 839, 1079, 1190, 1334, 1913
MaeII	ACGT	3 cut(s)	989, 1443, 1595
MaeIII	GTNAC	3 cut(s)	1129, 1467, 1853
MalI	GATC	7 cut(s)	119, 156, 169, 276, 396, 1272, 1544
MbiI	CCGCTC	2 cut(s)	359, 1809
MboI	GATC	7 cut(s)	117, 154, 167, 274, 394, 1270, 1542
MfeI	CAATTG	3 cut(s)	479, 1143, 1235
MflI	RGATCY	3 cut(s)	154, 167, 274
MhlI	GDGCHC	2 cut(s)	493, 1124
MlyI	GAGTC	4 cut(s)	751, 851, 1202, 1469
MmeI	TCCRAC	4 cut(s)	145, 182, 205, 302
MroI	TCCGGA	1 cut(s)	688
MroXI	GAANNNNTTC	2 cut(s)	311, 1581
MseI	TTAA	7 cut(s)	12, 431, 566, 644, 663, 695, 1904
MslI	CAYNNNNRTG	1 cut(s)	1168
MspA1I	CMGCKG	3 cut(s)	346, 975, 1802
MspI	CCGG	6 cut(s)	41, 90, 103, 113, 689, 1505
MspR9I	CCNGG	3 cut(s)	41, 114, 1505
MunI	CAATTG	3 cut(s)	479, 1143, 1235
MvnI	CGCG	1 cut(s)	1802
MwoI	GCNNNNNNNGC	1 cut(s)	475
NciI	CCSGG	3 cut(s)	41, 114, 1505
NcoI	CCATGG	2 cut(s)	712, 1849
NdeII	GATC	7 cut(s)	117, 154, 167, 274, 394, 1270, 1542
NlaIII	CATG	5 cut(s)	20, 148, 716, 1410, 1853
NlaIV	GGNNCC	2 cut(s)	45, 1121
NmuCI	GTSAC	1 cut(s)	1467
NsbI	TGCGCA	2 cut(s)	730, 887
NspI	RCATGY	1 cut(s)	1410
NspV	TTCGAA	2 cut(s)	916, 955
PaeR7I	CTCGAG	1 cut(s)	1457
PciI	ACATGT	1 cut(s)	1406
PciSI	GCTCTTC	1 cut(s)	26
PdmI	GAANNNNTTC	2 cut(s)	311, 1581
PleI	GAGTC	4 cut(s)	750, 850, 1201, 1468
PpsI	GAGTC	4 cut(s)	750, 850, 1201, 1468
Ppu21I	YACGTR	1 cut(s)	1444
PscI	ACATGT	1 cut(s)	1406
PshAI	GACNNNNGTC	1 cut(s)	1251
PspN4I	GGNNCC	2 cut(s)	45, 1121
PspPI	GGNCC	5 cut(s)	43, 95, 1012, 1475, 1811
PsuI	RGATCY	3 cut(s)	154, 167, 274
PvuII	CAGCTG	1 cut(s)	975
RsaI	GTAC	3 cut(s)	1159, 1261, 1911
RsaNI	GTAC	3 cut(s)	1158, 1260, 1910
RseI	CAYNNNNRTG	1 cut(s)	1168
SacII	CCGCGG	1 cut(s)	1803
SapI	GCTCTTC	1 cut(s)	26
SaqAI	TTAA	7 cut(s)	12, 431, 566, 644, 663, 695, 1904
Sau3AI	GATC	7 cut(s)	117, 154, 167, 274, 394, 1270, 1542
Sau96I	GGNCC	5 cut(s)	43, 95, 1012, 1475, 1811
SchI	GAGTC	4 cut(s)	751, 851, 1202, 1469
ScrFI	CCNGG	3 cut(s)	41, 114, 1505
SduI	GDGCHC	2 cut(s)	493, 1124
SfaNI	GCATC	7 cut(s)	402, 740, 887, 1160, 1442, 1676, 1784
SfcI	CTRYAG	2 cut(s)	369, 552
Sfr274I	CTCGAG	1 cut(s)	1457
Sfr303I	CCGCGG	1 cut(s)	1803
SfuI	TTCGAA	2 cut(s)	916, 955
SgrBI	CCGCGG	1 cut(s)	1803
SinI	GGWCC	1 cut(s)	1475
SlaI	CTCGAG	1 cut(s)	1457
SmiMI	CAYNNNNRTG	1 cut(s)	1168
SmlI	CTYRAG	7 cut(s)	449, 512, 737, 806, 1301, 1457, 1562
SmoI	CTYRAG	7 cut(s)	449, 512, 737, 806, 1301, 1457, 1562
SpeI	ACTAGT	2 cut(s)	623, 1912
SspI	AATATT	1 cut(s)	1891
SspMI	CTAG	6 cut(s)	624, 839, 1079, 1190, 1334, 1913
StyD4I	CCNGG	3 cut(s)	39, 112, 1503
StyI	CCWWGG	5 cut(s)	299, 462, 712, 1024, 1849
TaaI	ACNGT	7 cut(s)	163, 190, 283, 293, 392, 686, 1342
TaiI	ACGT	3 cut(s)	992, 1446, 1598
TaqI	TCGA	7 cut(s)	355, 597, 903, 916, 955, 1245, 1458
TaqII	GACCGA	2 cut(s)	1619, 1873
TatI	WGTACW	3 cut(s)	1157, 1259, 1909
TauI	GCSGC	5 cut(s)	72, 75, 96, 1218, 1812
Tru1I	TTAA	7 cut(s)	12, 431, 566, 644, 663, 695, 1904
Tru9I	TTAA	7 cut(s)	12, 431, 566, 644, 663, 695, 1904
TscAI	CASTG	4 cut(s)	195, 476, 1052, 1423
TseFI	GTSAC	1 cut(s)	1467
TseI	GCWGC	6 cut(s)	36, 343, 699, 726, 975, 1086
Tsp45I	GTSAC	1 cut(s)	1467
TspDTI	ATGAA	3 cut(s)	17, 1488, 1883
TspGWI	ACGGA	6 cut(s)	207, 211, 1220, 1361, 1467, 1711
TspRI	CASTG	4 cut(s)	195, 476, 1052, 1423
VpaK11BI	GGWCC	1 cut(s)	1475
XagI	CCTNNNNNAGG	1 cut(s)	864
XapI	RAATTY	4 cut(s)	239, 919, 958, 1581
XbaI	TCTAGA	3 cut(s)	838, 1189, 1333
XceI	RCATGY	1 cut(s)	1410
XhoI	CTCGAG	1 cut(s)	1457
XmiI	GTMKAC	1 cut(s)	1411
XmnI	GAANNNNTTC	2 cut(s)	311, 1581
XspI	CTAG	6 cut(s)	624, 839, 1079, 1190, 1334, 1913
ZraI	GACGTC	1 cut(s)	1596

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.