Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0014203

Physical Location & Seq

Genomic Coordinates Reverse (-)

21828842 .. 21832520

Gene Structure 3679 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G263300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1074 bp

ATGGAAGTCACTTTTCAACCTTCCCATGCTGTACTCTATCACAGGCAATCGAGGTTTGCTTCAACATCGTCTTTGTTGCCGCCATTCACTTACAAGGGACTCTCGATTCGGTGCTCTCCATGCAGATGGCCCATTTGGGCAAATTTAAGTAAATCTGCTTGTCGTAGTGTTTTATGCATTCAAAGGAAGCATGGTGGCATATCACGGTGCAACATTGATGCAAAAGAGGACTTTGGAAGACCAAATTATGATATTAGATTGCACACCCACCATAGGTTGTCCAGGTATGCAGTTGGACGATCTGGACTTACTGAAGCTGGGACCACTAGTGCTGACTATCCATTGCCAGAAGTAAATACGGTCTCAAAATTTAGGGGAATAGGCTTCTATGCCATTACTGCTTTCAATGCCATTTATCTCTTTGTGCTGATGCTGGTAGCCCATCCTTTTGTTCTGTTGTTGGATCAATACAAAAGAAAAGCTCATATGTTTATTGCCAAAGTTTGGGCCACTGTTACTGTTACACCATTTGTTAAGATCAAGTTTGAGGGACTGGAGAATTTGCCACCTCCAGATGCTCCTGCTGTATATGTTTCCAACCACCAGAGCTTTTTAGACATATATGTTCTTCTTACAATTGGGAGACCCTTTAAGTTTATCAGCAAGACTAGCATATTTCTCTATCCCATTGTTGGGTGGGCCATGTTTCTGATGGGTGTAATTCCTTTAAAGCGCATGGACAGCAAAAGTCAATTGGAGTGTCTTAAGCGTTGCATAGATCTTATCAAGAAGGGGGCCTCTGTCTTTTTCTTTCCTGAGGGAACACGCAGTAAAGATGGAAAATTAGGCTCTTTCAAGAAAGGTGCCTTCAGTATTGCAGCAAAAACCAAGGTACCAGTAGTGCCCATTACCCTTATAGGAACTGGAAAAATCATGCCTCCAGGAAGGGAGGCTATCTTGAATACTGGATCTGTGAAAGTTGTGATTCATAAGCCTATACAAGGAAATGATACAGAAGTACTGTGTAGTGAAAGTAGAAACATAATCGCAGATGCACTCAATCGTCAAGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0006644 GO:0006650 GO:0006655 GO:0006793 GO:0006796 GO:0007275 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009507 GO:0009526 GO:0009536 GO:0009790 GO:0009791 GO:0009793 GO:0009941 GO:0009987 GO:0010154 GO:0019637 GO:0022414 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046471 GO:0046474 GO:0046486 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090407 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 map00561 map00564 map01100 map01110

Pfam Domains

Protein Families

Acyltransferase

Protein Analysis

358

Amino Acids

39.81

Weight (kDa)

9.87

Isoelectric Point (pI)

41.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014203)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30580
fragaria_vesca	FvH4_1g00880 FvH4_1g00880
malus_domestica	MD02G1007100.v1.1 MD15G1144400.v1.1
prunus_persica	Prupe.7G263300_v2.0.a1 Prupe.7G263300_v2.0.a1
pyrus_communis	pycom02g00600 pycom15g13590
rosa_chinensis	RchiOBHm_Chr2g0085591
rosa_multiflora	Rmu_sc0006059.1_g000018 Rmu_sc0016087.1_g000004
rosa_roxburghii	Rroxscaffold_2G00155240
rosa_rugosa	Rorug01G0022900
rosa_samantha	Rh2AG010700 Rh2DG013100
rosa_wichuraiana	Rw2G000950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	892
AccB1I	GGYRCC	2 cut(s)	863, 892
AccB7I	CCANNNNNTGG	1 cut(s)	504
AciI	CCGC	1 cut(s)	80
AclWI	GGATC	2 cut(s)	471, 976
AcsI	RAATTY	3 cut(s)	142, 368, 559
AcuI	CTGAAG	2 cut(s)	333, 853
AfaI	GTAC	3 cut(s)	33, 894, 1020
AfiI	CCNNNNNNNGG	5 cut(s)	273, 504, 692, 693, 1001
AflII	CTTAAG	1 cut(s)	764
AgsI	TTSAA	6 cut(s)	17, 63, 182, 406, 856, 961
AhlI	ACTAGT	1 cut(s)	326
AjnI	CCWGG	2 cut(s)	281, 940
AluBI	AGCT	3 cut(s)	317, 482, 609
AluI	AGCT	3 cut(s)	317, 482, 609
Alw21I	GWGCWC	1 cut(s)	116
Alw26I	GTCTC	2 cut(s)	367, 637
AlwI	GGATC	2 cut(s)	471, 976
AoxI	GGCC	4 cut(s)	128, 507, 699, 795
ApeKI	GCWGC	1 cut(s)	878
ApoI	RAATTY	3 cut(s)	142, 368, 559
ArsI	GACNNNNNNTTYG	2 cut(s)	90, 122
Asp718I	GGTACC	1 cut(s)	892
AspLEI	GCGC	1 cut(s)	735
AspS9I	GGNCC	5 cut(s)	129, 321, 507, 699, 795
AvaII	GGWCC	1 cut(s)	321
AxyI	CCTNAGG	1 cut(s)	816
BaeGI	GKGCMC	1 cut(s)	906
BaeI	ACNNNNGTAYC	4 cut(s)	876, 909, 1002, 1035
BanI	GGYRCC	2 cut(s)	863, 892
BbsI	GAAGAC	1 cut(s)	244
Bbv12I	GWGCWC	1 cut(s)	116
BbvI	GCAGC	1 cut(s)	890
BccI	CCATC	4 cut(s)	120, 450, 706, 830
BciT130I	CCWGG	2 cut(s)	283, 942
BcoDI	GTCTC	2 cut(s)	367, 637
BcuI	ACTAGT	1 cut(s)	326
BfaI	CTAG	2 cut(s)	327, 669
BfrI	CTTAAG	1 cut(s)	764
BglII	AGATCT	1 cut(s)	778
BisI	GCNGC	2 cut(s)	80, 879
BlsI	GCNGC	2 cut(s)	81, 880
BmcAI	AGTACT	1 cut(s)	1020
Bme1390I	CCNGG	2 cut(s)	283, 942
Bme18I	GGWCC	1 cut(s)	321
BmgT120I	GGNCC	5 cut(s)	129, 321, 507, 699, 795
BmiI	GGNNCC	4 cut(s)	322, 796, 865, 894
BmrFI	CCNGG	2 cut(s)	283, 942
BmsI	GCATC	4 cut(s)	208, 420, 565, 1042
BpiI	GAAGAC	1 cut(s)	244
BpmI	CTGGAG	3 cut(s)	555, 575, 924
BsaI	GGTCTC	2 cut(s)	367, 637
BsaJI	CCNNGG	1 cut(s)	888
Bsc4I	CCNNNNNNNGG	5 cut(s)	273, 504, 692, 693, 1001
Bse1I	ACTGG	4 cut(s)	558, 896, 928, 970
Bse21I	CCTNAGG	1 cut(s)	816
Bse3DI	GCAATG	1 cut(s)	341
BseBI	CCWGG	2 cut(s)	283, 942
BseDI	CCNNGG	1 cut(s)	888
BseGI	GGATG	1 cut(s)	442
BseLI	CCNNNNNNNGG	5 cut(s)	273, 504, 692, 693, 1001
BseMI	GCAATG	1 cut(s)	341
BseMII	CTCAG	1 cut(s)	807
BseNI	ACTGG	4 cut(s)	558, 896, 928, 970
BseSI	GKGCMC	1 cut(s)	906
BseXI	GCAGC	1 cut(s)	890
BseYI	CCCAGC	1 cut(s)	317
BshFI	GGCC	4 cut(s)	130, 509, 701, 797
BshNI	GGYRCC	2 cut(s)	863, 892
BsiHKAI	GWGCWC	1 cut(s)	116
BslFI	GGGAC	3 cut(s)	111, 334, 564
BslI	CCNNNNNNNGG	5 cut(s)	273, 504, 692, 693, 1001
BsmAI	GTCTC	2 cut(s)	367, 637
BsmFI	GGGAC	3 cut(s)	111, 334, 564
BsmI	GAATGC	1 cut(s)	177
BsnI	GGCC	4 cut(s)	130, 509, 701, 797
Bso31I	GGTCTC	2 cut(s)	367, 637
Bsp1286I	GDGCHC	2 cut(s)	116, 906
Bsp143I	GATC	5 cut(s)	299, 463, 537, 778, 968
BspACI	CCGC	1 cut(s)	80
BspANI	GGCC	4 cut(s)	130, 509, 701, 797
BspCNI	CTCAG	1 cut(s)	808
BspLI	GGNNCC	4 cut(s)	322, 796, 865, 894
BspPI	GGATC	2 cut(s)	471, 976
BspT107I	GGYRCC	2 cut(s)	863, 892
BspTI	CTTAAG	1 cut(s)	764
BspTNI	GGTCTC	2 cut(s)	367, 637
BsrDI	GCAATG	1 cut(s)	341
BsrI	ACTGG	4 cut(s)	558, 896, 928, 970
BssECI	CCNNGG	1 cut(s)	888
BssMI	GATC	5 cut(s)	299, 463, 537, 778, 968
BssT1I	CCWWGG	1 cut(s)	888
Bst2UI	CCWGG	2 cut(s)	283, 942
Bst4CI	ACNGT	5 cut(s)	207, 361, 514, 520, 1023
BstAFI	CTTAAG	1 cut(s)	764
BstDEI	CTNAG	1 cut(s)	816
BstENI	CCTNNNNNAGG	1 cut(s)	999
BstF5I	GGATG	1 cut(s)	442
BstHHI	GCGC	1 cut(s)	735
BstKTI	GATC	5 cut(s)	302, 466, 540, 781, 971
BstMAI	GTCTC	2 cut(s)	367, 637
BstMBI	GATC	5 cut(s)	299, 463, 537, 778, 968
BstMWI	GCNNNNNNNGC	5 cut(s)	120, 398, 407, 669, 741
BstNI	CCWGG	2 cut(s)	283, 942
BstSCI	CCNGG	2 cut(s)	281, 940
BstSLI	GKGCMC	1 cut(s)	906
BstV1I	GCAGC	1 cut(s)	890
BstV2I	GAAGAC	1 cut(s)	244
BstX2I	RGATCY	2 cut(s)	778, 968
BstXI	CCANNNNNNTGG	1 cut(s)	126
BstYI	RGATCY	2 cut(s)	778, 968
Bsu36I	CCTNAGG	1 cut(s)	816
BsuRI	GGCC	4 cut(s)	130, 509, 701, 797
BtsCI	GGATG	1 cut(s)	442
BtsIMutI	CAGTG	1 cut(s)	510
CfoI	GCGC	1 cut(s)	735
Cfr13I	GGNCC	5 cut(s)	129, 321, 507, 699, 795
Csp6I	GTAC	3 cut(s)	32, 893, 1019
CviAII	CATG	6 cut(s)	26, 120, 191, 703, 736, 934
CviQI	GTAC	3 cut(s)	32, 893, 1019
DdeI	CTNAG	1 cut(s)	816
DpnI	GATC	5 cut(s)	301, 465, 539, 780, 970
DpnII	GATC	5 cut(s)	299, 463, 537, 778, 968
DraI	TTTAAA	1 cut(s)	729
Eco130I	CCWWGG	1 cut(s)	888
Eco31I	GGTCTC	2 cut(s)	367, 637
Eco47I	GGWCC	1 cut(s)	321
Eco57I	CTGAAG	2 cut(s)	333, 853
Eco81I	CCTNAGG	1 cut(s)	816
EcoNI	CCTNNNNNAGG	1 cut(s)	999
EcoO109I	RGGNCCY	1 cut(s)	795
EcoRII	CCWGG	2 cut(s)	281, 940
EcoT14I	CCWWGG	1 cut(s)	888
EcoT22I	ATGCAT	1 cut(s)	179
ErhI	CCWWGG	1 cut(s)	888
FaeI	CATG	6 cut(s)	29, 123, 194, 706, 739, 937
FaqI	GGGAC	3 cut(s)	111, 334, 564
FatI	CATG	6 cut(s)	25, 119, 190, 702, 735, 933
FauNDI	CATATG	1 cut(s)	486
Fnu4HI	GCNGC	2 cut(s)	80, 879
FokI	GGATG	1 cut(s)	429
Fsp4HI	GCNGC	2 cut(s)	80, 879
FspBI	CTAG	2 cut(s)	327, 669
GlaI	GCGC	1 cut(s)	734
GluI	GCNGC	2 cut(s)	80, 879
GsaI	CCCAGC	1 cut(s)	321
GsuI	CTGGAG	3 cut(s)	555, 575, 924
HaeIII	GGCC	4 cut(s)	130, 509, 701, 797
HhaI	GCGC	1 cut(s)	735
Hin1II	CATG	6 cut(s)	29, 123, 194, 706, 739, 937
Hin6I	GCGC	1 cut(s)	733
HinP1I	GCGC	1 cut(s)	733
HinfI	GANTC	3 cut(s)	99, 106, 985
Hpy188I	TCNGA	1 cut(s)	711
Hpy188III	TCNNGA	7 cut(s)	103, 303, 572, 787, 815, 856, 958
HpyAV	CCTTC	4 cut(s)	30, 784, 877, 939
HpyCH4III	ACNGT	5 cut(s)	207, 361, 514, 520, 1023
HpyCH4V	TGCA	9 cut(s)	123, 177, 210, 221, 262, 290, 774, 878, 1055
HpyF10VI	GCNNNNNNNGC	5 cut(s)	120, 398, 407, 669, 741
HpyF3I	CTNAG	1 cut(s)	816
Hsp92II	CATG	6 cut(s)	29, 123, 194, 706, 739, 937
HspAI	GCGC	1 cut(s)	733
KpnI	GGTACC	1 cut(s)	896
Kzo9I	GATC	5 cut(s)	299, 463, 537, 778, 968
LmnI	GCTCC	1 cut(s)	583
Lsp1109I	GCAGC	1 cut(s)	890
LweI	GCATC	4 cut(s)	208, 420, 565, 1042
MaeI	CTAG	2 cut(s)	327, 669
MaeIII	GTNAC	3 cut(s)	7, 514, 520
MalI	GATC	5 cut(s)	301, 465, 539, 780, 970
MboI	GATC	5 cut(s)	299, 463, 537, 778, 968
MboII	GAAGA	2 cut(s)	249, 620
MfeI	CAATTG	2 cut(s)	636, 752
MflI	RGATCY	2 cut(s)	778, 968
MhlI	GDGCHC	2 cut(s)	116, 906
MluCI	AATT	8 cut(s)	142, 244, 368, 559, 636, 720, 752, 842
MlyI	GAGTC	1 cut(s)	93
MmeI	TCCRAC	3 cut(s)	274, 441, 621
MnlI	CCTC	8 cut(s)	45, 220, 541, 579, 808, 811, 943, 948
Mph1103I	ATGCAT	1 cut(s)	179
MseI	TTAA	5 cut(s)	146, 534, 651, 728, 765
MslI	CAYNNNNRTG	1 cut(s)	124
MspCI	CTTAAG	1 cut(s)	764
MspR9I	CCNGG	2 cut(s)	283, 942
MunI	CAATTG	2 cut(s)	636, 752
Mva1269I	GAATGC	1 cut(s)	177
MvaI	CCWGG	2 cut(s)	283, 942
MwoI	GCNNNNNNNGC	5 cut(s)	120, 398, 407, 669, 741
NdeI	CATATG	1 cut(s)	486
NdeII	GATC	5 cut(s)	299, 463, 537, 778, 968
NlaIII	CATG	6 cut(s)	29, 123, 194, 706, 739, 937
NlaIV	GGNNCC	4 cut(s)	322, 796, 865, 894
NmuCI	GTSAC	1 cut(s)	7
NsiI	ATGCAT	1 cut(s)	179
PctI	GAATGC	1 cut(s)	177
PfeI	GAWTC	2 cut(s)	106, 985
PflMI	CCANNNNNTGG	1 cut(s)	504
PfoI	TCCNGGA	1 cut(s)	940
PkrI	GCNGC	2 cut(s)	81, 880
PleI	GAGTC	1 cut(s)	93
PpsI	GAGTC	1 cut(s)	93
Psp6I	CCWGG	2 cut(s)	281, 940
PspFI	CCCAGC	1 cut(s)	317
PspGI	CCWGG	2 cut(s)	281, 940
PspN4I	GGNNCC	4 cut(s)	322, 796, 865, 894
PspPI	GGNCC	5 cut(s)	129, 321, 507, 699, 795
PsuI	RGATCY	2 cut(s)	778, 968
RsaI	GTAC	3 cut(s)	33, 894, 1020
RsaNI	GTAC	3 cut(s)	32, 893, 1019
RseI	CAYNNNNRTG	1 cut(s)	124
SaqAI	TTAA	5 cut(s)	146, 534, 651, 728, 765
SatI	GCNGC	2 cut(s)	80, 879
Sau3AI	GATC	5 cut(s)	299, 463, 537, 778, 968
Sau96I	GGNCC	5 cut(s)	129, 321, 507, 699, 795
ScaI	AGTACT	1 cut(s)	1020
SchI	GAGTC	1 cut(s)	93
ScrFI	CCNGG	2 cut(s)	283, 942
SduI	GDGCHC	2 cut(s)	116, 906
SfaNI	GCATC	4 cut(s)	208, 420, 565, 1042
SinI	GGWCC	1 cut(s)	321
SmiMI	CAYNNNNRTG	1 cut(s)	124
SmlI	CTYRAG	1 cut(s)	764
SmoI	CTYRAG	1 cut(s)	764
SpeI	ACTAGT	1 cut(s)	326
Sse9I	AATT	8 cut(s)	142, 244, 368, 559, 636, 720, 752, 842
SsiI	CCGC	1 cut(s)	80
SspMI	CTAG	2 cut(s)	327, 669
StyD4I	CCNGG	2 cut(s)	281, 940
StyI	CCWWGG	1 cut(s)	888
TaaI	ACNGT	5 cut(s)	207, 361, 514, 520, 1023
TaqI	TCGA	2 cut(s)	50, 104
TasI	AATT	8 cut(s)	142, 244, 368, 559, 636, 720, 752, 842
TatI	WGTACW	2 cut(s)	31, 1018
TauI	GCSGC	1 cut(s)	82
TfiI	GAWTC	2 cut(s)	106, 985
Tru1I	TTAA	5 cut(s)	146, 534, 651, 728, 765
Tru9I	TTAA	5 cut(s)	146, 534, 651, 728, 765
TscAI	CASTG	1 cut(s)	517
TseFI	GTSAC	1 cut(s)	7
TseI	GCWGC	1 cut(s)	878
Tsp45I	GTSAC	1 cut(s)	7
TspDTI	ATGAA	1 cut(s)	977
TspRI	CASTG	1 cut(s)	517
Van91I	CCANNNNNTGG	1 cut(s)	504
Vha464I	CTTAAG	1 cut(s)	764
VpaK11BI	GGWCC	1 cut(s)	321
XagI	CCTNNNNNAGG	1 cut(s)	999
XapI	RAATTY	3 cut(s)	142, 368, 559
XcmI	CCANNNNNNNNNTGG	1 cut(s)	709
XspI	CTAG	2 cut(s)	327, 669
ZrmI	AGTACT	1 cut(s)	1020
Zsp2I	ATGCAT	1 cut(s)	179

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.