Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0014203

Physical Location & Seq

Genomic Coordinates Forward (+)

464299 .. 465804

Gene Structure 1506 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1007100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 372 bp

ATGTTTCTGATGGGTGTAATTCCTTTAAAGCGCATGGACAGCAAAAGCCAGTTGGAATGCCTTAAGCGTTGCATAGAGCTTATTAATAAGGGGGCTTCTGTCTTTTTCTTCCCTGAGGGGACACGCAGCAAAGATGGAACATTAGGTGCTTTTAAGAGAGGTGCCTTCAGTGTTGCAGCGAAAACCAAGGTACCAGTAGTGCCCATTACCCTTATAGGAACTGGAAAAATCATGCCTCCGGGAAGGGAGGATATCTTGAATACTGGAGCTGTTAAAGTCGTTATTCATAAACCTATAGAAGGACATGATACAGAAGTACTGTGTAGTGAAACTAGAAACGTAATCGCTGGTGCACTTGATCGTCAAGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0006644 GO:0006650 GO:0006655 GO:0006793 GO:0006796 GO:0007275 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009507 GO:0009526 GO:0009536 GO:0009790 GO:0009791 GO:0009793 GO:0009941 GO:0009987 GO:0010154 GO:0019637 GO:0022414 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046471 GO:0046474 GO:0046486 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090407 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 map00561 map00564 map01100 map01110

Pfam Domains

Protein Families

Acyltransferase

Protein Analysis

124

Amino Acids

13.27

Weight (kDa)

9.51

Isoelectric Point (pI)

46.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acyltransferase	PF01553	3 - 71	3.3e-16	Acyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0014203)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30580
fragaria_vesca	FvH4_1g00880 FvH4_1g00880
malus_domestica	MD02G1007100.v1.1 MD15G1144400.v1.1
prunus_persica	Prupe.7G263300_v2.0.a1 Prupe.7G263300_v2.0.a1
pyrus_communis	pycom02g00600 pycom15g13590
rosa_chinensis	RchiOBHm_Chr2g0085591
rosa_multiflora	Rmu_sc0006059.1_g000018 Rmu_sc0016087.1_g000004
rosa_roxburghii	Rroxscaffold_2G00155240
rosa_rugosa	Rorug01G0022900
rosa_samantha	Rh2AG010700 Rh2DG013100
rosa_wichuraiana	Rw2G000950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	190
AccB1I	GGYRCC	2 cut(s)	161, 190
AcuI	CTGAAG	1 cut(s)	151
AfaI	GTAC	2 cut(s)	192, 318
AfiI	CCNNNNNNNGG	1 cut(s)	299
AflII	CTTAAG	1 cut(s)	62
AgsI	TTSAA	1 cut(s)	259
AluBI	AGCT	2 cut(s)	79, 269
AluI	AGCT	2 cut(s)	79, 269
Alw21I	GWGCWC	1 cut(s)	355
Alw44I	GTGCAC	1 cut(s)	351
ApaLI	GTGCAC	1 cut(s)	351
ApeKI	GCWGC	2 cut(s)	126, 176
AseI	ATTAAT	1 cut(s)	84
Asp718I	GGTACC	1 cut(s)	190
AspLEI	GCGC	1 cut(s)	33
AsuC2I	CCSGG	1 cut(s)	240
AxyI	CCTNAGG	1 cut(s)	114
BaeGI	GKGCMC	2 cut(s)	204, 355
BaeI	ACNNNNGTAYC	4 cut(s)	174, 207, 300, 333
BanI	GGYRCC	2 cut(s)	161, 190
Bbv12I	GWGCWC	1 cut(s)	355
BbvI	GCAGC	2 cut(s)	138, 188
BccI	CCATC	2 cut(s)	4, 128
BcnI	CCSGG	1 cut(s)	240
BfaI	CTAG	1 cut(s)	333
BfmI	CTRYAG	1 cut(s)	294
BfrI	CTTAAG	1 cut(s)	62
BisI	GCNGC	2 cut(s)	127, 177
BlsI	GCNGC	2 cut(s)	128, 178
BmcAI	AGTACT	1 cut(s)	318
Bme1390I	CCNGG	1 cut(s)	240
BmiI	GGNNCC	2 cut(s)	163, 192
BmrFI	CCNGG	1 cut(s)	240
BpmI	CTGGAG	1 cut(s)	285
BpuMI	CCSGG	1 cut(s)	240
BsaJI	CCNNGG	1 cut(s)	186
Bsc4I	CCNNNNNNNGG	1 cut(s)	299
Bse1I	ACTGG	4 cut(s)	49, 194, 226, 268
Bse21I	CCTNAGG	1 cut(s)	114
BseDI	CCNNGG	1 cut(s)	186
BseLI	CCNNNNNNNGG	1 cut(s)	299
BseMII	CTCAG	1 cut(s)	105
BseNI	ACTGG	4 cut(s)	49, 194, 226, 268
BseSI	GKGCMC	2 cut(s)	204, 355
BseXI	GCAGC	2 cut(s)	138, 188
BshNI	GGYRCC	2 cut(s)	161, 190
BsiHKAI	GWGCWC	1 cut(s)	355
BsiSI	CCGG	1 cut(s)	239
BslFI	GGGAC	1 cut(s)	133
BslI	CCNNNNNNNGG	1 cut(s)	299
BsmFI	GGGAC	1 cut(s)	133
BsmI	GAATGC	1 cut(s)	62
Bsp1286I	GDGCHC	2 cut(s)	204, 355
Bsp143I	GATC	1 cut(s)	358
BspCNI	CTCAG	1 cut(s)	106
BspLI	GGNNCC	2 cut(s)	163, 192
BspT107I	GGYRCC	2 cut(s)	161, 190
BspTI	CTTAAG	1 cut(s)	62
BsrI	ACTGG	4 cut(s)	49, 194, 226, 268
BssECI	CCNNGG	1 cut(s)	186
BssMI	GATC	1 cut(s)	358
BssT1I	CCWWGG	1 cut(s)	186
Bst4CI	ACNGT	1 cut(s)	321
BstAFI	CTTAAG	1 cut(s)	62
BstDEI	CTNAG	1 cut(s)	114
BstENI	CCTNNNNNAGG	1 cut(s)	297
BstHHI	GCGC	1 cut(s)	33
BstKTI	GATC	1 cut(s)	361
BstMBI	GATC	1 cut(s)	358
BstMWI	GCNNNNNNNGC	1 cut(s)	39
BstSCI	CCNGG	1 cut(s)	238
BstSFI	CTRYAG	1 cut(s)	294
BstSLI	GKGCMC	2 cut(s)	204, 355
BstV1I	GCAGC	2 cut(s)	138, 188
Bsu36I	CCTNAGG	1 cut(s)	114
BtsIMutI	CAGTG	1 cut(s)	175
CfoI	GCGC	1 cut(s)	33
Csp6I	GTAC	2 cut(s)	191, 317
CviAII	CATG	3 cut(s)	34, 232, 305
CviJI	RGCY	5 cut(s)	48, 79, 95, 269, 369
CviKI_1	RGCY	5 cut(s)	48, 79, 95, 269, 369
CviQI	GTAC	2 cut(s)	191, 317
DdeI	CTNAG	1 cut(s)	114
DpnI	GATC	1 cut(s)	360
DpnII	GATC	1 cut(s)	358
DraI	TTTAAA	1 cut(s)	27
Eco130I	CCWWGG	1 cut(s)	186
Eco32I	GATATC	1 cut(s)	253
Eco57I	CTGAAG	1 cut(s)	151
Eco81I	CCTNAGG	1 cut(s)	114
EcoNI	CCTNNNNNAGG	1 cut(s)	297
EcoRV	GATATC	1 cut(s)	253
EcoT14I	CCWWGG	1 cut(s)	186
ErhI	CCWWGG	1 cut(s)	186
FaeI	CATG	3 cut(s)	37, 235, 308
FaiI	YATR	7 cut(s)	35, 74, 215, 233, 288, 296, 306
FaqI	GGGAC	1 cut(s)	133
FatI	CATG	3 cut(s)	33, 231, 304
Fnu4HI	GCNGC	2 cut(s)	127, 177
Fsp4HI	GCNGC	2 cut(s)	127, 177
FspBI	CTAG	1 cut(s)	333
GlaI	GCGC	1 cut(s)	32
GluI	GCNGC	2 cut(s)	127, 177
GsuI	CTGGAG	1 cut(s)	285
HapII	CCGG	1 cut(s)	239
HhaI	GCGC	1 cut(s)	33
Hin1II	CATG	3 cut(s)	37, 235, 308
Hin6I	GCGC	1 cut(s)	31
HinP1I	GCGC	1 cut(s)	31
HpaII	CCGG	1 cut(s)	239
Hpy166II	GTNNAC	1 cut(s)	353
Hpy188I	TCNGA	1 cut(s)	9
Hpy188III	TCNNGA	1 cut(s)	256
Hpy8I	GTNNAC	1 cut(s)	353
HpyAV	CCTTC	3 cut(s)	175, 237, 293
HpyCH4III	ACNGT	1 cut(s)	321
HpyCH4IV	ACGT	1 cut(s)	339
HpyCH4V	TGCA	3 cut(s)	72, 176, 353
HpyF10VI	GCNNNNNNNGC	1 cut(s)	39
HpyF3I	CTNAG	1 cut(s)	114
HpySE526I	ACGT	1 cut(s)	339
Hsp92II	CATG	3 cut(s)	37, 235, 308
HspAI	GCGC	1 cut(s)	31
KpnI	GGTACC	1 cut(s)	194
Kzo9I	GATC	1 cut(s)	358
LmnI	GCTCC	1 cut(s)	266
LpnPI	CCDG	7 cut(s)	62, 126, 207, 207, 249, 252, 333
Lsp1109I	GCAGC	2 cut(s)	138, 188
MaeI	CTAG	1 cut(s)	333
MaeII	ACGT	1 cut(s)	339
MalI	GATC	1 cut(s)	360
MboI	GATC	1 cut(s)	358
MboII	GAAGA	1 cut(s)	100
MhlI	GDGCHC	2 cut(s)	204, 355
MluCI	AATT	1 cut(s)	18
MmeI	TCCRAC	1 cut(s)	33
MnlI	CCTC	4 cut(s)	109, 152, 241, 246
MseI	TTAA	5 cut(s)	26, 63, 84, 153, 273
MspCI	CTTAAG	1 cut(s)	62
MspI	CCGG	1 cut(s)	239
MspR9I	CCNGG	1 cut(s)	240
Mva1269I	GAATGC	1 cut(s)	62
MwoI	GCNNNNNNNGC	1 cut(s)	39
NciI	CCSGG	1 cut(s)	240
NdeII	GATC	1 cut(s)	358
NlaIII	CATG	3 cut(s)	37, 235, 308
NlaIV	GGNNCC	2 cut(s)	163, 192
PctI	GAATGC	1 cut(s)	62
PfoI	TCCNGGA	1 cut(s)	238
PkrI	GCNGC	2 cut(s)	128, 178
PshBI	ATTAAT	1 cut(s)	84
PspN4I	GGNNCC	2 cut(s)	163, 192
RsaI	GTAC	2 cut(s)	192, 318
RsaNI	GTAC	2 cut(s)	191, 317
SaqAI	TTAA	5 cut(s)	26, 63, 84, 153, 273
SatI	GCNGC	2 cut(s)	127, 177
Sau3AI	GATC	1 cut(s)	358
ScaI	AGTACT	1 cut(s)	318
ScrFI	CCNGG	1 cut(s)	240
SduI	GDGCHC	2 cut(s)	204, 355
SetI	ASST	7 cut(s)	81, 148, 163, 192, 271, 295, 342
SfcI	CTRYAG	1 cut(s)	294
SmlI	CTYRAG	1 cut(s)	62
SmoI	CTYRAG	1 cut(s)	62
Sse9I	AATT	1 cut(s)	18
SspMI	CTAG	1 cut(s)	333
StyD4I	CCNGG	1 cut(s)	238
StyI	CCWWGG	1 cut(s)	186
TaaI	ACNGT	1 cut(s)	321
TaiI	ACGT	1 cut(s)	342
TasI	AATT	1 cut(s)	18
TatI	WGTACW	1 cut(s)	316
Tru1I	TTAA	5 cut(s)	26, 63, 84, 153, 273
Tru9I	TTAA	5 cut(s)	26, 63, 84, 153, 273
TscAI	CASTG	1 cut(s)	175
TseI	GCWGC	2 cut(s)	126, 176
TspDTI	ATGAA	1 cut(s)	275
TspRI	CASTG	1 cut(s)	175
Vha464I	CTTAAG	1 cut(s)	62
VneI	GTGCAC	1 cut(s)	351
VspI	ATTAAT	1 cut(s)	84
XagI	CCTNNNNNAGG	1 cut(s)	297
XspI	CTAG	1 cut(s)	333
ZrmI	AGTACT	1 cut(s)	318

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.