Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004952

Physical Location & Seq

Genomic Coordinates Forward (+)

15756018 .. 15759314

Gene Structure 3297 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G32660.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1203 bp

ATGATAGCTAACGGATTCGAGAGTATGGATAAAGAACGAGTCAGGAAACGTCCTCGTATGACCTGGGACGAGGCCCCAGCTGAACCAGAGGCTAAAAGGGCTGTGATTAAAGGACATGGAAGCGATGGGAGGATTTTGTCACCACCATTAAGGGACGATGATCGTGATGGTCATTATGTTTTCAGTTTGAGGGACAATCTCACTCCTAGATATAAAATACTTAGCAAGATGGGTGAAGGCACATTTGGTCGGGTTTTGGAATGTTGGGATCGTGATACAAAAGAATATGTGGCAATAAAGATAATTCGAAGCATTAAGAAATACCGGGATGCAGCAATGATTGAAATTGATGTACTTCAGAAACTTGTTAAGAGTGATAAAGGCCGCACACGCTGTGTACAGATGAAGAACTGGTTTGATTACCGAAATCATATTTGCATTGTGTTCGAGAAGCTTGGGCCAAGTTTGTTTGACTTTCTAAAGAGAAATAAATACTCCGCATTTCCTCTGGCCCTTGTTCGGGATTTTGGATGCCAGCTTTTGGAATCTGTAGCATATATGCACGAGTTACAGTTAGTTCACACCGACCTCAAGCCTGAGAACATTCTGTTGGTGTCTTCTGAAAATGTAAAGCTTCCTGACAATAAGAGGAGTGCTGCAAATGAGACACATTTCAGGTGCTTACCAAAGTCAAGCGCCATTAAACTGATTGATTTTGGCAGTACTGTTTGTGATAACCGGATTCATCACTCCATTGTCCAAACAAGACATTACAGATCCCCCGAGGTCATTTTAGGTCTAGGATGGAGTTACCAGTGTGACTTATGGAGTATAGGTTGTATACTATTTGAACTATGCACGGGTGAGGCTCTCTTTCAGACGCATGATAACCTAGAACATCTAGCTATGATGGAGAGGGCGCTTGGACCTTTACCTGAACATATGACTCGAAAAGCCAGCCGGGGTGCTGAGAAATATTTCAGGAGAGGGTGTCGGTTGAATTGGCCAGAAGGAGCCAACTCTAGAGAAAGTATTAGGGCTGTAAAAAGACTTGATCGTCTCAAGGATATGGTATCGAAACATGTTGACAACACGAGATCTAGATTTGCAGATCTATTGTATGGTTTATTGGCATATGATCCATCTGAGCGTCTCACAGCAAACGAAGCTCTTGACCATCCTTTCTTTAAGAGCTCAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0046777 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

400

Amino Acids

46.22

Weight (kDa)

9.1

Isoelectric Point (pI)

44.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	63 - 388	8.3e-50	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	65 - 298	4e-18	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004952)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G36627 AT4G32660 AT4G32660 AT4G32660 AT4G32660
fragaria_vesca	FvH4_2g36300 FvH4_2g36300 FvH4_2g36300 FvH4_2g36300
malus_domestica	MD15G1099600.v1.1
prunus_persica	Prupe.1G454400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0305581
rosa_laevigata	RLG00000010875
rosa_multiflora	Rmu_co8396459.1_g000001 Rmu_sc0001153.1_g000003 Rmu_sc0001809.1_g000008 Rmu_sc0040964.1_g000001
rosa_roxburghii	Rroxscaffold_4G00291350 Rroxscaffold_4G00291890 Rroxscaffold_7G00162560
rosa_rugosa	Rorug06G0341900
rosa_samantha	Rh1BG043700 Rh2AG235500 Rh2DG242800 Rh6AG453900 Rh6BG447600 Rh6CG467600 Rh6DG454200 Rh7AG230900
rosa_wichuraiana	Rw6G039560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1056
AccB7I	CCANNNNNTGG	1 cut(s)	541
AccI	GTMKAC	1 cut(s)	841
AciI	CCGC	2 cut(s)	385, 498
AclWI	GGATC	3 cut(s)	276, 771, 1133
AcoI	YGGCCR	1 cut(s)	1004
AcuI	CTGAAG	1 cut(s)	341
AdeI	CACNNNGTG	1 cut(s)	395
AfaI	GTAC	3 cut(s)	354, 399, 724
AfiI	CCNNNNNNNGG	3 cut(s)	519, 520, 541
AflIII	ACRYGT	1 cut(s)	1081
AgsI	TTSAA	3 cut(s)	344, 851, 1000
AjnI	CCWGG	1 cut(s)	62
AjuI	GAANNNNNNNTTGG	4 cut(s)	228, 260, 593, 625
AluBI	AGCT	8 cut(s)	8, 80, 454, 538, 634, 905, 1169, 1194
AluI	AGCT	8 cut(s)	8, 80, 454, 538, 634, 905, 1169, 1194
Alw21I	GWGCWC	1 cut(s)	1196
Alw26I	GTCTC	3 cut(s)	659, 1064, 1157
AlwI	GGATC	3 cut(s)	276, 771, 1133
Ama87I	CYCGRG	1 cut(s)	782
AoxI	GGCC	5 cut(s)	72, 382, 458, 510, 1004
ApeKI	GCWGC	2 cut(s)	332, 656
Asp700I	GAANNNNTTC	1 cut(s)	977
AspLEI	GCGC	2 cut(s)	698, 922
AspS9I	GGNCC	4 cut(s)	73, 458, 511, 926
AsuC2I	CCSGG	2 cut(s)	326, 962
AsuHPI	GGTGA	3 cut(s)	132, 245, 875
AsuII	TTCGAA	1 cut(s)	307
AvaI	CYCGRG	1 cut(s)	782
AvaII	GGWCC	1 cut(s)	926
BalI	TGGCCA	1 cut(s)	1006
BanII	GRGCYC	1 cut(s)	1196
BauI	CACGAG	2 cut(s)	563, 1093
BbsI	GAAGAC	1 cut(s)	609
Bbv12I	GWGCWC	1 cut(s)	1196
BbvI	GCAGC	2 cut(s)	344, 643
BccI	CCATC	7 cut(s)	119, 161, 223, 798, 904, 1150, 1185
BcgI	CGANNNNNNTGC	2 cut(s)	427, 461
BciT130I	CCWGG	1 cut(s)	64
BcnI	CCSGG	2 cut(s)	326, 962
BcoDI	GTCTC	3 cut(s)	659, 1064, 1157
BfaI	CTAG	6 cut(s)	207, 800, 893, 902, 1023, 1101
BfmI	CTRYAG	1 cut(s)	549
BfoI	RGCGCY	2 cut(s)	699, 923
BglII	AGATCT	2 cut(s)	1097, 1111
BisI	GCNGC	3 cut(s)	333, 385, 657
BlsI	GCNGC	3 cut(s)	334, 386, 658
BmcAI	AGTACT	1 cut(s)	724
Bme1390I	CCNGG	3 cut(s)	64, 326, 962
Bme18I	GGWCC	1 cut(s)	926
BmeT110I	CYCGRG	1 cut(s)	782
BmgT120I	GGNCC	4 cut(s)	73, 458, 511, 926
BmiI	GGNNCC	2 cut(s)	75, 1015
BmrFI	CCNGG	3 cut(s)	64, 326, 962
BmsI	GCATC	2 cut(s)	319, 521
BpiI	GAAGAC	1 cut(s)	609
Bpu14I	TTCGAA	1 cut(s)	307
BpuEI	CTTGAG	3 cut(s)	575, 1046, 1180
BpuMI	CCSGG	2 cut(s)	326, 962
BsaJI	CCNNGG	3 cut(s)	63, 783, 961
BsaWI	WCCGGW	1 cut(s)	738
BsaXI	ACNNNNNCTCC	4 cut(s)	820, 850, 976, 1006
Bsc4I	CCNNNNNNNGG	3 cut(s)	519, 520, 541
Bse1I	ACTGG	2 cut(s)	416, 814
Bse3DI	GCAATG	1 cut(s)	342
BseBI	CCWGG	1 cut(s)	64
BseDI	CCNNGG	3 cut(s)	63, 783, 961
BseGI	GGATG	4 cut(s)	334, 536, 809, 1177
BseLI	CCNNNNNNNGG	3 cut(s)	519, 520, 541
BseMI	GCAATG	1 cut(s)	342
BseMII	CTCAG	3 cut(s)	588, 960, 1137
BseNI	ACTGG	2 cut(s)	416, 814
BseRI	GAGGAG	1 cut(s)	664
BseXI	GCAGC	2 cut(s)	344, 643
BseYI	CCCAGC	1 cut(s)	76
BshFI	GGCC	5 cut(s)	74, 384, 460, 512, 1006
BsiHKAI	GWGCWC	1 cut(s)	1196
BsiHKCI	CYCGRG	1 cut(s)	782
BsiSI	CCGG	3 cut(s)	325, 739, 961
BslFI	GGGAC	3 cut(s)	80, 167, 206
BslI	CCNNNNNNNGG	3 cut(s)	519, 520, 541
BsmAI	GTCTC	3 cut(s)	659, 1064, 1157
BsmBI	CGTCTC	2 cut(s)	1064, 1157
BsmFI	GGGAC	3 cut(s)	80, 167, 206
BsnI	GGCC	5 cut(s)	74, 384, 460, 512, 1006
BsoBI	CYCGRG	1 cut(s)	782
Bsp119I	TTCGAA	1 cut(s)	307
Bsp1286I	GDGCHC	1 cut(s)	1196
Bsp1407I	TGTACA	1 cut(s)	397
Bsp143I	GATC	7 cut(s)	160, 268, 776, 1054, 1097, 1111, 1138
BspACI	CCGC	2 cut(s)	385, 498
BspANI	GGCC	5 cut(s)	74, 384, 460, 512, 1006
BspCNI	CTCAG	3 cut(s)	589, 961, 1138
BspLI	GGNNCC	2 cut(s)	75, 1015
BspPI	GGATC	3 cut(s)	276, 771, 1133
BspT104I	TTCGAA	1 cut(s)	307
BsrDI	GCAATG	1 cut(s)	342
BsrGI	TGTACA	1 cut(s)	397
BsrI	ACTGG	2 cut(s)	416, 814
BssECI	CCNNGG	3 cut(s)	63, 783, 961
BssMI	GATC	7 cut(s)	160, 268, 776, 1054, 1097, 1111, 1138
BssNAI	GTATAC	1 cut(s)	842
BssSI	CACGAG	2 cut(s)	563, 1093
Bst1107I	GTATAC	1 cut(s)	842
Bst2BI	CACGAG	2 cut(s)	563, 1093
Bst2UI	CCWGG	1 cut(s)	64
Bst4CI	ACNGT	2 cut(s)	573, 727
BstAUI	TGTACA	1 cut(s)	397
BstBI	TTCGAA	1 cut(s)	307
BstC8I	GCNNGC	2 cut(s)	536, 958
BstDEI	CTNAG	4 cut(s)	221, 597, 969, 1146
BstF5I	GGATG	4 cut(s)	334, 536, 809, 1177
BstH2I	RGCGCY	2 cut(s)	699, 923
BstHHI	GCGC	2 cut(s)	698, 922
BstKTI	GATC	7 cut(s)	163, 271, 779, 1057, 1100, 1114, 1141
BstMAI	GTCTC	3 cut(s)	659, 1064, 1157
BstMBI	GATC	7 cut(s)	160, 268, 776, 1054, 1097, 1111, 1138
BstMWI	GCNNNNNNNGC	3 cut(s)	98, 390, 1166
BstNI	CCWGG	1 cut(s)	64
BstNSI	RCATGY	1 cut(s)	1085
BstSCI	CCNGG	3 cut(s)	62, 324, 960
BstSFI	CTRYAG	1 cut(s)	549
BstV1I	GCAGC	2 cut(s)	344, 643
BstV2I	GAAGAC	1 cut(s)	609
BstX2I	RGATCY	3 cut(s)	776, 1097, 1111
BstYI	RGATCY	3 cut(s)	776, 1097, 1111
BstZ17I	GTATAC	1 cut(s)	842
BsuRI	GGCC	5 cut(s)	74, 384, 460, 512, 1006
BtgZI	GCGATG	1 cut(s)	138
BtsCI	GGATG	4 cut(s)	334, 536, 809, 1177
BtsIMutI	CAGTG	1 cut(s)	821
Cac8I	GCNNGC	2 cut(s)	536, 958
CfoI	GCGC	2 cut(s)	698, 922
Cfr13I	GGNCC	4 cut(s)	73, 458, 511, 926
CseI	GACGC	2 cut(s)	889, 1139
Csp6I	GTAC	3 cut(s)	353, 398, 723
CviAII	CATG	3 cut(s)	116, 884, 1082
CviQI	GTAC	3 cut(s)	353, 398, 723
DdeI	CTNAG	4 cut(s)	221, 597, 969, 1146
DpnI	GATC	7 cut(s)	162, 270, 778, 1056, 1099, 1113, 1140
DpnII	GATC	7 cut(s)	160, 268, 776, 1054, 1097, 1111, 1138
DraIII	CACNNNGTG	1 cut(s)	395
DrdI	GACNNNNNNGTC	1 cut(s)	1056
DseDI	GACNNNNNNGTC	1 cut(s)	1056
EaeI	YGGCCR	1 cut(s)	1004
Ecl136II	GAGCTC	1 cut(s)	1194
Eco24I	GRGCYC	1 cut(s)	1196
Eco47I	GGWCC	1 cut(s)	926
Eco53kI	GAGCTC	1 cut(s)	1194
Eco57I	CTGAAG	1 cut(s)	341
Eco88I	CYCGRG	1 cut(s)	782
EcoICRI	GAGCTC	1 cut(s)	1194
EcoO109I	RGGNCCY	1 cut(s)	73
EcoRII	CCWGG	1 cut(s)	62
EcoT38I	GRGCYC	1 cut(s)	1196
Esp3I	CGTCTC	2 cut(s)	1064, 1157
FaeI	CATG	3 cut(s)	119, 887, 1085
FaqI	GGGAC	3 cut(s)	80, 167, 206
FatI	CATG	3 cut(s)	115, 883, 1081
FauNDI	CATATG	2 cut(s)	942, 1135
FblI	GTMKAC	1 cut(s)	841
Fnu4HI	GCNGC	3 cut(s)	333, 385, 657
FokI	GGATG	4 cut(s)	341, 543, 816, 1164
FriOI	GRGCYC	1 cut(s)	1196
Fsp4HI	GCNGC	3 cut(s)	333, 385, 657
FspBI	CTAG	6 cut(s)	207, 800, 893, 902, 1023, 1101
GlaI	GCGC	2 cut(s)	697, 921
GluI	GCNGC	3 cut(s)	333, 385, 657
GsaI	CCCAGC	1 cut(s)	80
HaeII	RGCGCY	2 cut(s)	699, 923
HaeIII	GGCC	5 cut(s)	74, 384, 460, 512, 1006
HapII	CCGG	3 cut(s)	325, 739, 961
HgaI	GACGC	2 cut(s)	889, 1139
HhaI	GCGC	2 cut(s)	698, 922
Hin1II	CATG	3 cut(s)	119, 887, 1085
Hin6I	GCGC	2 cut(s)	696, 920
HinP1I	GCGC	2 cut(s)	696, 920
HincII	GTYRAC	1 cut(s)	1087
HindII	GTYRAC	1 cut(s)	1087
HindIII	AAGCTT	2 cut(s)	452, 632
HinfI	GANTC	5 cut(s)	15, 39, 545, 742, 946
HpaII	CCGG	3 cut(s)	325, 739, 961
HphI	GGTGA	3 cut(s)	132, 245, 875
Hpy166II	GTNNAC	4 cut(s)	398, 580, 842, 1087
Hpy188I	TCNGA	4 cut(s)	360, 622, 879, 1147
Hpy8I	GTNNAC	4 cut(s)	398, 580, 842, 1087
HpyAV	CCTTC	2 cut(s)	230, 1004
HpyCH4III	ACNGT	2 cut(s)	573, 727
HpyCH4IV	ACGT	1 cut(s)	49
HpyCH4V	TGCA	6 cut(s)	332, 438, 562, 659, 858, 1109
HpyF10VI	GCNNNNNNNGC	3 cut(s)	98, 390, 1166
HpyF3I	CTNAG	4 cut(s)	221, 597, 969, 1146
HpySE526I	ACGT	1 cut(s)	49
Hsp92II	CATG	3 cut(s)	119, 887, 1085
HspAI	GCGC	2 cut(s)	696, 920
Kzo9I	GATC	7 cut(s)	160, 268, 776, 1054, 1097, 1111, 1138
LmnI	GCTCC	1 cut(s)	1013
Lsp1109I	GCAGC	2 cut(s)	344, 643
LweI	GCATC	2 cut(s)	319, 521
MaeI	CTAG	6 cut(s)	207, 800, 893, 902, 1023, 1101
MaeII	ACGT	1 cut(s)	49
MaeIII	GTNAC	4 cut(s)	138, 567, 809, 818
MalI	GATC	7 cut(s)	162, 270, 778, 1056, 1099, 1113, 1140
MboI	GATC	7 cut(s)	160, 268, 776, 1054, 1097, 1111, 1138
MboII	GAAGA	2 cut(s)	418, 609
MflI	RGATCY	3 cut(s)	776, 1097, 1111
MhlI	GDGCHC	1 cut(s)	1196
MlsI	TGGCCA	1 cut(s)	1006
MluCI	AATT	3 cut(s)	303, 345, 1000
MluNI	TGGCCA	1 cut(s)	1006
MlyI	GAGTC	2 cut(s)	48, 940
Mox20I	TGGCCA	1 cut(s)	1006
MroXI	GAANNNNTTC	1 cut(s)	977
MscI	TGGCCA	1 cut(s)	1006
MseI	TTAA	6 cut(s)	108, 149, 315, 369, 702, 1188
Msp20I	TGGCCA	1 cut(s)	1006
MspA1I	CMGCKG	1 cut(s)	80
MspI	CCGG	3 cut(s)	325, 739, 961
MspR9I	CCNGG	3 cut(s)	64, 326, 962
MvaI	CCWGG	1 cut(s)	64
MwoI	GCNNNNNNNGC	3 cut(s)	98, 390, 1166
NciI	CCSGG	2 cut(s)	326, 962
NdeI	CATATG	2 cut(s)	942, 1135
NdeII	GATC	7 cut(s)	160, 268, 776, 1054, 1097, 1111, 1138
NlaIII	CATG	3 cut(s)	119, 887, 1085
NlaIV	GGNNCC	2 cut(s)	75, 1015
NmuCI	GTSAC	2 cut(s)	138, 818
NspI	RCATGY	1 cut(s)	1085
NspV	TTCGAA	1 cut(s)	307
PciI	ACATGT	1 cut(s)	1081
PdmI	GAANNNNTTC	1 cut(s)	977
PfeI	GAWTC	3 cut(s)	15, 545, 742
PflMI	CCANNNNNTGG	1 cut(s)	541
PkrI	GCNGC	3 cut(s)	334, 386, 658
PleI	GAGTC	2 cut(s)	47, 940
PpsI	GAGTC	2 cut(s)	47, 940
PscI	ACATGT	1 cut(s)	1081
Psp124BI	GAGCTC	1 cut(s)	1196
Psp6I	CCWGG	1 cut(s)	62
PspFI	CCCAGC	1 cut(s)	76
PspGI	CCWGG	1 cut(s)	62
PspN4I	GGNNCC	2 cut(s)	75, 1015
PspPI	GGNCC	4 cut(s)	73, 458, 511, 926
PsuI	RGATCY	3 cut(s)	776, 1097, 1111
PvuII	CAGCTG	1 cut(s)	80
RsaI	GTAC	3 cut(s)	354, 399, 724
RsaNI	GTAC	3 cut(s)	353, 398, 723
SacI	GAGCTC	1 cut(s)	1196
SaqAI	TTAA	6 cut(s)	108, 149, 315, 369, 702, 1188
SatI	GCNGC	3 cut(s)	333, 385, 657
Sau3AI	GATC	7 cut(s)	160, 268, 776, 1054, 1097, 1111, 1138
Sau96I	GGNCC	4 cut(s)	73, 458, 511, 926
ScaI	AGTACT	1 cut(s)	724
SchI	GAGTC	2 cut(s)	48, 940
ScrFI	CCNGG	3 cut(s)	64, 326, 962
SduI	GDGCHC	1 cut(s)	1196
SfaNI	GCATC	2 cut(s)	319, 521
SfcI	CTRYAG	1 cut(s)	549
SfuI	TTCGAA	1 cut(s)	307
SinI	GGWCC	1 cut(s)	926
SmlI	CTYRAG	3 cut(s)	590, 1061, 1195
SmoI	CTYRAG	3 cut(s)	590, 1061, 1195
Sse9I	AATT	3 cut(s)	303, 345, 1000
SsiI	CCGC	2 cut(s)	385, 498
SspI	AATATT	1 cut(s)	977
SspMI	CTAG	6 cut(s)	207, 800, 893, 902, 1023, 1101
SstI	GAGCTC	1 cut(s)	1196
StyD4I	CCNGG	3 cut(s)	62, 324, 960
TaaI	ACNGT	2 cut(s)	573, 727
TaiI	ACGT	1 cut(s)	52
TaqI	TCGA	5 cut(s)	18, 307, 447, 949, 1076
TasI	AATT	3 cut(s)	303, 345, 1000
TatI	WGTACW	3 cut(s)	352, 397, 722
TauI	GCSGC	1 cut(s)	387
TfiI	GAWTC	3 cut(s)	15, 545, 742
Tru1I	TTAA	6 cut(s)	108, 149, 315, 369, 702, 1188
Tru9I	TTAA	6 cut(s)	108, 149, 315, 369, 702, 1188
TscAI	CASTG	1 cut(s)	821
TseFI	GTSAC	2 cut(s)	138, 818
TseI	GCWGC	2 cut(s)	332, 656
Tsp45I	GTSAC	2 cut(s)	138, 818
TspDTI	ATGAA	2 cut(s)	419, 734
TspGWI	ACGGA	1 cut(s)	27
TspRI	CASTG	1 cut(s)	821
Van91I	CCANNNNNTGG	1 cut(s)	541
VpaK11BI	GGWCC	1 cut(s)	926
XbaI	TCTAGA	2 cut(s)	1022, 1100
XceI	RCATGY	1 cut(s)	1085
XmiI	GTMKAC	1 cut(s)	841
XmnI	GAANNNNTTC	1 cut(s)	977
XspI	CTAG	6 cut(s)	207, 800, 893, 902, 1023, 1101
ZrmI	AGTACT	1 cut(s)	724

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.