Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010713

Physical Location & Seq

Genomic Coordinates Forward (+)

15842443 .. 15844865

Gene Structure 2423 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G32830.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 885 bp

ATGGCGATCCCTACGGAGACACAACACCAGGAGAAGGAGGCTTCAGATGCTTCTGCAGCAGCTGCACAAAAGAGATGGACTTTAAGCGATTTCGACATCGGTAAGCCTCTTGGCAGAGGCAAATTCGGTCACGTCTATCTCGCCAGAGAAAAACGGAGCAATCACGTTGTCGCTCTAAAGGTTCTTTTCAAGAGCCAGCTTCAACAATCCCAAGTTGAACATCAGCTCAGAAGAGAAGTTGAGATTCAGTCTCATCTTCGTCACCCCAACATACTCCGGCTTTATGGCTATTTCTATGATCAAAAAAGAGTTTATTTGATACTTGAGTATGCTGCTAGAGGCGAACTTTACAAGGATCTTCAGAAATGCAAATACTTCAGCGAAAGACGAGCTGCTACTTATGTTGCCTCATTGGCGAGGGCTCTCATCTATTGCCATGGCAAGCATGTGATACACAGAGATATTAAACCAGAGAATCTGCTAATTGGTGCTCAGGGTGAGCTCAAGATTGCAGACTTTGGTTGGTCGGTACACACATTTAACCGAAGAAGGACCATGTGTGGCACACTAGATTACCTTCCTCCTGAGATGGTCGAAAGCGTAGAACATGATGCTAGTGTAGATATCTGGAGCCTTGGGATTCTCTGTTACGAGTTTCTTTATGGTGTACCTCCTTTTGAAGCCATGGAGCACTCAGACACATACAGAAGGATTGTGCAAGTGGATCTCAAGTTCCCTCCCAAACCAATAATCTCTGCATCTGCAAAGGATCTTATTAGCCAGATGCTTGTCAAGGAGTCTTCGCAACGTCTGCCATTGCACAAGCTTCTGGAGCATCCGTGGATCGTGCAAAACGCTGATCCTTCTGGAATCTACAGAGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000228 GO:0000278 GO:0000775 GO:0000779 GO:0000780 GO:0000793 GO:0000794 GO:0000922 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005694 GO:0005730 GO:0005737 GO:0005819 GO:0005856 GO:0005874 GO:0005875 GO:0005876 GO:0006325 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0007052 GO:0008150 GO:0008152 GO:0009504 GO:0009524 GO:0009987 GO:0010564 GO:0012505 GO:0015630 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016569 GO:0016570 GO:0016572 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022402 GO:0031090 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032133 GO:0032465 GO:0032991 GO:0035173 GO:0035174 GO:0035175 GO:0035404 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043987 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0050789 GO:0050794 GO:0051233 GO:0051276 GO:0051302 GO:0051726 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0098687 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140096 GO:1901564 GO:1902850 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

294

Amino Acids

33.97

Weight (kDa)

8.99

Isoelectric Point (pI)

43.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	32 - 282	2.5e-73	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	33 - 278	1.6e-42	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010713)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25880 AT2G25880 AT2G25880 AT2G25880 AT4G32830
fragaria_vesca	FvH4_2g35180
malus_domestica	MD08G1109800.v1.1 MD15G1089300.v1.1
prunus_persica	Prupe.1G443900_v2.0.a1
pyrus_communis	pycom15g08370
rosa_chinensis	RchiOBHm_Chr6g0306761
rosa_laevigata	RLG00000010767
rosa_multiflora	Rmu_ssc0000380.1_g000001
rosa_roxburghii	Rroxscaffold_7G00161480
rosa_rugosa	Rorug06G0352600
rosa_samantha	Rh6AG464600 Rh6BG436200 Rh6CG478900 Rh6DG466000
rosa_wichuraiana	Rw6G040490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AclWI	GGATC	5 cut(s)	363, 732, 777, 851, 854
AcsI	RAATTY	1 cut(s)	122
AcuI	CTGAAG	3 cut(s)	27, 344, 361
AfaI	GTAC	2 cut(s)	531, 669
AfiI	CCNNNNNNNGG	1 cut(s)	34
AgsI	TTSAA	4 cut(s)	190, 203, 218, 680
AjiI	CACGTC	1 cut(s)	133
AjnI	CCWGG	1 cut(s)	27
AloI	GAACNNNNNNTCC	2 cut(s)	716, 748
AluBI	AGCT	6 cut(s)	62, 199, 226, 392, 502, 826
AluI	AGCT	6 cut(s)	62, 199, 226, 392, 502, 826
Alw21I	GWGCWC	3 cut(s)	493, 504, 693
Alw26I	GTCTC	2 cut(s)	11, 255
AlwI	GGATC	5 cut(s)	363, 732, 777, 851, 854
AlwNI	CAGNNNCTG	1 cut(s)	62
ApeKI	GCWGC	5 cut(s)	56, 59, 62, 332, 392
ApoI	RAATTY	1 cut(s)	122
AspS9I	GGNCC	1 cut(s)	552
AsuHPI	GGTGA	2 cut(s)	254, 509
AvaII	GGWCC	1 cut(s)	552
BaeI	ACNNNNGTAYC	2 cut(s)	311, 344
BanII	GRGCYC	2 cut(s)	424, 504
BbsI	GAAGAC	1 cut(s)	792
Bbv12I	GWGCWC	3 cut(s)	493, 504, 693
BbvI	GCAGC	5 cut(s)	49, 68, 71, 319, 379
BccI	CCATC	2 cut(s)	69, 583
BciT130I	CCWGG	1 cut(s)	29
BclI	TGATCA	1 cut(s)	298
BcoDI	GTCTC	2 cut(s)	11, 255
BfaI	CTAG	3 cut(s)	336, 569, 615
BfmI	CTRYAG	2 cut(s)	54, 874
BglI	GCCNNNNNGGC	1 cut(s)	413
BisI	GCNGC	5 cut(s)	57, 60, 63, 333, 393
BlsI	GCNGC	5 cut(s)	58, 61, 64, 334, 394
Bme1390I	CCNGG	1 cut(s)	29
Bme18I	GGWCC	1 cut(s)	552
BmgBI	CACGTC	1 cut(s)	133
BmgT120I	GGNCC	1 cut(s)	552
BmiI	GGNNCC	1 cut(s)	632
BmrFI	CCNGG	1 cut(s)	29
BmsI	GCATC	5 cut(s)	37, 601, 767, 774, 844
BpiI	GAAGAC	1 cut(s)	792
BpmI	CTGGAG	2 cut(s)	649, 851
Bpu10I	CCTNAGC	1 cut(s)	492
BpuEI	CTTGAG	3 cut(s)	344, 488, 713
BsaJI	CCNNGG	4 cut(s)	436, 634, 684, 839
BsaXI	ACNNNNNCTCC	2 cut(s)	824, 854
Bsc4I	CCNNNNNNNGG	1 cut(s)	34
Bse3DI	GCAATG	1 cut(s)	815
BseBI	CCWGG	1 cut(s)	29
BseDI	CCNNGG	4 cut(s)	436, 634, 684, 839
BseGI	GGATG	1 cut(s)	835
BseLI	CCNNNNNNNGG	1 cut(s)	34
BseMI	GCAATG	1 cut(s)	815
BseMII	CTCAG	4 cut(s)	241, 506, 576, 708
BseXI	GCAGC	5 cut(s)	49, 68, 71, 319, 379
BsgI	GTGCAG	1 cut(s)	48
BsiHKAI	GWGCWC	3 cut(s)	493, 504, 693
BsiSI	CCGG	1 cut(s)	277
BslI	CCNNNNNNNGG	1 cut(s)	34
BsmAI	GTCTC	2 cut(s)	11, 255
Bsp1286I	GDGCHC	4 cut(s)	424, 493, 504, 693
Bsp143I	GATC	7 cut(s)	6, 298, 355, 724, 769, 843, 859
Bsp19I	CCATGG	2 cut(s)	436, 684
BspCNI	CTCAG	4 cut(s)	240, 505, 577, 707
BspLI	GGNNCC	1 cut(s)	632
BspMAI	CTGCAG	1 cut(s)	58
BspPI	GGATC	5 cut(s)	363, 732, 777, 851, 854
BsrDI	GCAATG	1 cut(s)	815
BssECI	CCNNGG	4 cut(s)	436, 634, 684, 839
BssMI	GATC	7 cut(s)	6, 298, 355, 724, 769, 843, 859
BssT1I	CCWWGG	3 cut(s)	436, 634, 684
Bst2UI	CCWGG	1 cut(s)	29
Bst6I	CTCTTC	1 cut(s)	226
BstAPI	GCANNNNNTGC	2 cut(s)	62, 811
BstC8I	GCNNGC	2 cut(s)	197, 443
BstDEI	CTNAG	4 cut(s)	227, 492, 585, 694
BstDSI	CCRYGG	3 cut(s)	436, 684, 839
BstF5I	GGATG	1 cut(s)	835
BstKTI	GATC	7 cut(s)	9, 301, 358, 727, 772, 846, 862
BstMAI	GTCTC	2 cut(s)	11, 255
BstMBI	GATC	7 cut(s)	6, 298, 355, 724, 769, 843, 859
BstMWI	GCNNNNNNNGC	6 cut(s)	47, 56, 62, 413, 811, 832
BstNI	CCWGG	1 cut(s)	29
BstNSI	RCATGY	1 cut(s)	449
BstSCI	CCNGG	1 cut(s)	27
BstSFI	CTRYAG	2 cut(s)	54, 874
BstV1I	GCAGC	5 cut(s)	49, 68, 71, 319, 379
BstV2I	GAAGAC	1 cut(s)	792
BstX2I	RGATCY	3 cut(s)	355, 724, 769
BstYI	RGATCY	3 cut(s)	355, 724, 769
BtgI	CCRYGG	3 cut(s)	436, 684, 839
BtrI	CACGTC	1 cut(s)	133
BtsCI	GGATG	1 cut(s)	835
Cac8I	GCNNGC	2 cut(s)	197, 443
CaiI	CAGNNNCTG	1 cut(s)	62
Cfr13I	GGNCC	1 cut(s)	552
Csp6I	GTAC	2 cut(s)	530, 668
CviAII	CATG	5 cut(s)	437, 446, 556, 608, 685
CviQI	GTAC	2 cut(s)	530, 668
DdeI	CTNAG	4 cut(s)	227, 492, 585, 694
DpnI	GATC	7 cut(s)	8, 300, 357, 726, 771, 845, 861
DpnII	GATC	7 cut(s)	6, 298, 355, 724, 769, 843, 859
Eam1104I	CTCTTC	1 cut(s)	226
EarI	CTCTTC	1 cut(s)	226
Ecl136II	GAGCTC	1 cut(s)	502
Eco130I	CCWWGG	3 cut(s)	436, 634, 684
Eco24I	GRGCYC	2 cut(s)	424, 504
Eco32I	GATATC	1 cut(s)	625
Eco47I	GGWCC	1 cut(s)	552
Eco53kI	GAGCTC	1 cut(s)	502
Eco57I	CTGAAG	3 cut(s)	27, 344, 361
EcoICRI	GAGCTC	1 cut(s)	502
EcoRII	CCWGG	1 cut(s)	27
EcoRV	GATATC	1 cut(s)	625
EcoT14I	CCWWGG	3 cut(s)	436, 634, 684
EcoT38I	GRGCYC	2 cut(s)	424, 504
ErhI	CCWWGG	3 cut(s)	436, 634, 684
FaeI	CATG	5 cut(s)	440, 449, 559, 611, 688
FatI	CATG	5 cut(s)	436, 445, 555, 607, 684
FbaI	TGATCA	1 cut(s)	298
Fnu4HI	GCNGC	5 cut(s)	57, 60, 63, 333, 393
FokI	GGATG	1 cut(s)	822
FriOI	GRGCYC	2 cut(s)	424, 504
Fsp4HI	GCNGC	5 cut(s)	57, 60, 63, 333, 393
FspBI	CTAG	3 cut(s)	336, 569, 615
GluI	GCNGC	5 cut(s)	57, 60, 63, 333, 393
GsuI	CTGGAG	2 cut(s)	649, 851
HapII	CCGG	1 cut(s)	277
Hin1II	CATG	5 cut(s)	440, 449, 559, 611, 688
HindIII	AAGCTT	1 cut(s)	824
HinfI	GANTC	5 cut(s)	244, 475, 640, 797, 870
HpaII	CCGG	1 cut(s)	277
HphI	GGTGA	2 cut(s)	254, 509
Hpy166II	GTNNAC	2 cut(s)	532, 668
Hpy188I	TCNGA	4 cut(s)	46, 230, 363, 697
Hpy188III	TCNNGA	6 cut(s)	190, 505, 584, 628, 830, 867
Hpy8I	GTNNAC	2 cut(s)	532, 668
HpyAV	CCTTC	5 cut(s)	28, 543, 587, 702, 873
HpyCH4IV	ACGT	3 cut(s)	132, 165, 808
HpyCH4V	TGCA	9 cut(s)	56, 65, 369, 512, 718, 758, 764, 820, 850
HpyF10VI	GCNNNNNNNGC	6 cut(s)	47, 56, 62, 413, 811, 832
HpyF3I	CTNAG	4 cut(s)	227, 492, 585, 694
HpySE526I	ACGT	3 cut(s)	132, 165, 808
Hsp92II	CATG	5 cut(s)	440, 449, 559, 611, 688
Ksp22I	TGATCA	1 cut(s)	298
Kzo9I	GATC	7 cut(s)	6, 298, 355, 724, 769, 843, 859
LmnI	GCTCC	4 cut(s)	156, 630, 688, 832
Lsp1109I	GCAGC	5 cut(s)	49, 68, 71, 319, 379
LweI	GCATC	5 cut(s)	37, 601, 767, 774, 844
MaeI	CTAG	3 cut(s)	336, 569, 615
MaeII	ACGT	3 cut(s)	132, 165, 808
MaeIII	GTNAC	3 cut(s)	128, 260, 647
MalI	GATC	7 cut(s)	8, 300, 357, 726, 771, 845, 861
MboI	GATC	7 cut(s)	6, 298, 355, 724, 769, 843, 859
MboII	GAAGA	5 cut(s)	243, 248, 350, 558, 792
MflI	RGATCY	3 cut(s)	355, 724, 769
MhlI	GDGCHC	4 cut(s)	424, 493, 504, 693
MluCI	AATT	2 cut(s)	122, 483
MlyI	GAGTC	1 cut(s)	806
MnlI	CCTC	9 cut(s)	31, 110, 117, 332, 411, 418, 591, 681, 747
MseI	TTAA	4 cut(s)	83, 465, 540, 883
MspA1I	CMGCKG	1 cut(s)	62
MspI	CCGG	1 cut(s)	277
MspR9I	CCNGG	1 cut(s)	29
MvaI	CCWGG	1 cut(s)	29
MwoI	GCNNNNNNNGC	6 cut(s)	47, 56, 62, 413, 811, 832
NcoI	CCATGG	2 cut(s)	436, 684
NdeII	GATC	7 cut(s)	6, 298, 355, 724, 769, 843, 859
NlaIII	CATG	5 cut(s)	440, 449, 559, 611, 688
NlaIV	GGNNCC	1 cut(s)	632
NmuCI	GTSAC	2 cut(s)	128, 260
NspI	RCATGY	1 cut(s)	449
PfeI	GAWTC	4 cut(s)	244, 475, 640, 870
PkrI	GCNGC	5 cut(s)	58, 61, 64, 334, 394
PleI	GAGTC	1 cut(s)	805
PpsI	GAGTC	1 cut(s)	805
Psp124BI	GAGCTC	1 cut(s)	504
Psp6I	CCWGG	1 cut(s)	27
PspGI	CCWGG	1 cut(s)	27
PspN4I	GGNNCC	1 cut(s)	632
PspPI	GGNCC	1 cut(s)	552
PstI	CTGCAG	1 cut(s)	58
PstNI	CAGNNNCTG	1 cut(s)	62
PsuI	RGATCY	3 cut(s)	355, 724, 769
PvuII	CAGCTG	1 cut(s)	62
RsaI	GTAC	2 cut(s)	531, 669
RsaNI	GTAC	2 cut(s)	530, 668
SacI	GAGCTC	1 cut(s)	504
SaqAI	TTAA	4 cut(s)	83, 465, 540, 883
SatI	GCNGC	5 cut(s)	57, 60, 63, 333, 393
Sau3AI	GATC	7 cut(s)	6, 298, 355, 724, 769, 843, 859
Sau96I	GGNCC	1 cut(s)	552
SchI	GAGTC	1 cut(s)	806
ScrFI	CCNGG	1 cut(s)	29
SduI	GDGCHC	4 cut(s)	424, 493, 504, 693
SfaNI	GCATC	5 cut(s)	37, 601, 767, 774, 844
SfcI	CTRYAG	2 cut(s)	54, 874
SinI	GGWCC	1 cut(s)	552
SmlI	CTYRAG	3 cut(s)	323, 503, 728
SmoI	CTYRAG	3 cut(s)	323, 503, 728
Sse9I	AATT	2 cut(s)	122, 483
SspMI	CTAG	3 cut(s)	336, 569, 615
SstI	GAGCTC	1 cut(s)	504
StyD4I	CCNGG	1 cut(s)	27
StyI	CCWWGG	3 cut(s)	436, 634, 684
TaiI	ACGT	3 cut(s)	135, 168, 811
TaqI	TCGA	2 cut(s)	93, 594
TaqII	GACCGA	1 cut(s)	116
TasI	AATT	2 cut(s)	122, 483
TfiI	GAWTC	4 cut(s)	244, 475, 640, 870
Tru1I	TTAA	4 cut(s)	83, 465, 540, 883
Tru9I	TTAA	4 cut(s)	83, 465, 540, 883
TseFI	GTSAC	2 cut(s)	128, 260
TseI	GCWGC	5 cut(s)	56, 59, 62, 332, 392
Tsp45I	GTSAC	2 cut(s)	128, 260
TspGWI	ACGGA	3 cut(s)	29, 169, 828
VpaK11BI	GGWCC	1 cut(s)	552
XapI	RAATTY	1 cut(s)	122
XceI	RCATGY	1 cut(s)	449
XspI	CTAG	3 cut(s)	336, 569, 615

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.