AT4G33080

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0010799
Physical Location & Seq
Forward (+)
15959906 .. 15964819
4914 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G33080.1

Sequence Viewer

Length: 1560 bp
ATGGAGGATATACAGGAGGAAGAGAACGGTACGGACGAGGAGGTTCTGGGATCGAGCTTGACCATGGAGAAAGTGGCCGCAGCGAAGCAGTACATCGAGAATCACTACAAAGCTCAGAACAAGAACATTCAAGAGAGGAAAGAGAGACGGTGGATCTTAGAAAGAAAGTTGGCGTCTTCTGGAGTGCCAAAAGAGGAGCAAATCAACATGATTAAAGACCTGGAGAGAAAAGAGACAGAGTTTATGAGGCTTAAAAGGAACAAGATTAGTGTCGATGACTTTGAGCTTTTGACTATCATTGGAAGAGGTGCTTTTGGTGAGGTTCGCTTATGTCGGGAGAGAAAGTCTGGAAATATTTATGCCATGAAGAAGTTAAAGAAATCTGAAATGGTCATGAGAGGACAGGTTGAGCATGTCAGAGCAGAGAGGAACCTGCTGGCTGAGGTTGAAAGCCATTATATTGTGAAGCTTTACTATTCATTTCAGGATCCCGAGTATCTGTATCTGATTATGGAATATCTCCCCGGTGGTGATATGATGACCTTGCTCATGAGGGAGGACACATTACGGGAAGATGTTGCCAGATTTTATATTGCTCAAAGTGTCCTGGCCATTGAATCCATACACAGATACAACTATATTCATAGGGATATCAAACCTGATAACCTACTTTTGGACAAAGATGGGCACATGAAACTCTCGGACTTTGGGCTCTGTAAGCCTCTTGATTGTAGAAATTTACCTTCAATTCAGGAGAATAGGGCCACGGATGATGAAACTATGTCAGAACCTATGGATGTTGATAGATGCTTTCCTGACACTGATAACAAGAGAAGCTGGCGCAGTCCCCAGGAACAACTTCAGCATTGGCAGATGAATCGCAGAAAACTAGCATTTTCAACTGTGGGAACACCGGACTATATTGCTCCTGAAGTTTTGCTGAAGAAAGGATATGGCATGGAATGTGATTGGTGGTCATTAGGTGCAATTATGTACGAAATGCTCGTTGGGTATCCTCCTTTTTATGCTGATGACCCTATATCAACTTGCAGAAAGATCGTCCATTGGAGAAACCATTTGAAATTTCCTGAGGATGCGAAGTTTTCATCTGAGGCAAAAGATCTTATCTGCAGGTTGCTGTGCAACGTTGACCATAGGCTTGGTACTGGAGGAGGAGCCCAGCAAATCAAGGATCATCCTTGGTTCAAGGATGTTGTGTGGGAAAAGCTCTATGAAATGGAGGCTGCGTACAAACCAGAAGTGAACGACGAGCTAGATACACAAAATTTTATGAAGTTTGATGAAGTGAATTCTCCTGCACCTGAAAGAACTAGATCAGGACTCTCCAGGAAGATGCTTCTTGCTCCCAAGGATTTAAGTTTTGTTGGCTACACATACAAGAACTTTGACGCTGTAAAAGGATTGCGTCATTCACTTGAGATGGCAAGAACTATGTCTCTAGATCGATCACCAGCTGAGGCGATGCCTGTGGAGCTGATAAGCGGGGAAGCAGCAGAGGCACAGATGGTATCATCGATGGATGATCCAATGATAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_C

Protein Analysis

519

Amino Acids

60.43

Weight (kDa)

5.52

Isoelectric Point (pI)

45.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 95 - 243 1.7e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 96 - 242 6.2e-22 Protein tyrosine and serine/threonine kinase
ABC1 PF03109 168 - 243 2e-06 ABC1 atypical kinase-like domain
Pkinase PF00069 292 - 402 6.8e-22 Protein kinase domain
Pkinase_C PF00433 421 - 466 8.9e-06 Protein kinase C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010799)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G33080 AT4G33080
fragaria_vesca FvH4_2g31460 FvH4_2g31460
malus_domestica MD08G1066200.v1.1 MD15G1055000.v1.1
prunus_persica Prupe.1G408200_v2.0.a1
pyrus_communis pycom08g05490 pycom15g05190
rosa_chinensis RchiOBHm_Chr6g0311341
rosa_laevigata RLG00000010415
rosa_multiflora Rmu_sc0008536.1_g000007
rosa_roxburghii Rroxscaffold_7G00157700
rosa_rugosa Rorug06G0387700 Rorug06G0387700
rosa_samantha Rh6AG502400 Rh6BG513000 Rh6CG518800 Rh6DG505000
rosa_wichuraiana Rw6G043750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 441, 1122
AciI CCGC 2 cut(s) 78, 1503
AclI AACGTT 1 cut(s) 1146
AclWI GGATC 6 cut(s) 58, 161, 482, 495, 1200, 1538
AcoI YGGCCR 2 cut(s) 75, 609
AcsI RAATTY 4 cut(s) 736, 1082, 1285, 1309
AcuI CTGAAG 3 cut(s) 845, 951, 962
AcyI GRCGYC 1 cut(s) 173
AfaI GTAC 5 cut(s) 31, 92, 995, 1165, 1250
AfiI CCNNNNNNNGG 1 cut(s) 673
AgsI TTSAA 7 cut(s) 131, 449, 617, 747, 900, 1081, 1207
AjnI CCWGG 4 cut(s) 219, 606, 849, 1346
AjuI GAANNNNNNNTTGG 2 cut(s) 990, 1022
AluBI AGCT 9 cut(s) 57, 113, 286, 469, 837, 1228, 1273, 1475, 1495
AluI AGCT 9 cut(s) 57, 113, 286, 469, 837, 1228, 1273, 1475, 1495
Alw26I GTCTC 3 cut(s) 139, 227, 1461
AlwI GGATC 6 cut(s) 58, 161, 482, 495, 1200, 1538
Ama87I CYCGRG 1 cut(s) 491
AoxI GGCC 3 cut(s) 75, 609, 762
ApeKI GCWGC 3 cut(s) 80, 1244, 1511
ApoI RAATTY 4 cut(s) 736, 1082, 1285, 1309
Asp700I GAANNNNTTC 1 cut(s) 858
AspLEI GCGC 1 cut(s) 843
AspS9I GGNCC 1 cut(s) 762
AsuC2I CCSGG 1 cut(s) 525
AsuHPI GGTGA 3 cut(s) 329, 542, 1461
AvaI CYCGRG 1 cut(s) 491
AxyI CCTNAGG 1 cut(s) 1089
BaeGI GKGCMC 1 cut(s) 690
BalI TGGCCA 1 cut(s) 611
BamHI GGATCC 1 cut(s) 487
BanII GRGCYC 2 cut(s) 714, 1180
BbsI GAAGAC 1 cut(s) 168
BbvCI CCTCAGC 2 cut(s) 441, 1476
BbvI GCAGC 3 cut(s) 92, 1231, 1523
BccI CCATC 4 cut(s) 677, 1435, 1519, 1531
BcgI CGANNNNNNTGC 4 cut(s) 860, 894, 1039, 1073
BciT130I CCWGG 4 cut(s) 221, 608, 851, 1348
BciVI GTATCC 1 cut(s) 1023
BcnI CCSGG 1 cut(s) 525
BcoDI GTCTC 3 cut(s) 139, 227, 1461
BfaI CTAG 4 cut(s) 890, 1274, 1332, 1460
BfmI CTRYAG 1 cut(s) 1129
BfuAI ACCTGC 2 cut(s) 441, 1122
BfuI GTATCC 1 cut(s) 1023
BglII AGATCT 1 cut(s) 1120
BisI GCNGC 4 cut(s) 78, 81, 1245, 1512
BlsI GCNGC 4 cut(s) 79, 82, 1246, 1513
Bme1390I CCNGG 5 cut(s) 221, 525, 608, 851, 1348
BmeT110I CYCGRG 1 cut(s) 491
BmgT120I GGNCC 1 cut(s) 762
BmiI GGNNCC 3 cut(s) 431, 489, 1177
BmrFI CCNGG 5 cut(s) 221, 525, 608, 851, 1348
BmsI GCATC 4 cut(s) 797, 1084, 1344, 1473
BpiI GAAGAC 1 cut(s) 168
BpmI CTGGAG 4 cut(s) 201, 242, 1188, 1330
Bpu10I CCTNAGC 2 cut(s) 441, 1476
BpuEI CTTGAG 1 cut(s) 1457
BpuMI CCSGG 1 cut(s) 525
Bsa29I ATCGAT 2 cut(s) 1465, 1535
BsaHI GRCGYC 1 cut(s) 173
BsaJI CCNNGG 6 cut(s) 63, 523, 765, 849, 1199, 1368
BsaWI WCCGGW 1 cut(s) 913
BsaXI ACNNNNNCTCC 4 cut(s) 329, 359, 1232, 1262
Bsc4I CCNNNNNNNGG 1 cut(s) 673
Bse1I ACTGG 1 cut(s) 1171
Bse21I CCTNAGG 1 cut(s) 1089
BseBI CCWGG 4 cut(s) 221, 608, 851, 1348
BseCI ATCGAT 2 cut(s) 1465, 1535
BseDI CCNNGG 6 cut(s) 63, 523, 765, 849, 1199, 1368
BseGI GGATG 6 cut(s) 775, 802, 1099, 1195, 1216, 1546
BseLI CCNNNNNNNGG 1 cut(s) 673
BseMII CTCAG 5 cut(s) 128, 432, 1080, 1101, 1467
BseNI ACTGG 1 cut(s) 1171
BseRI GAGGAG 4 cut(s) 53, 209, 1185, 1188
BseSI GKGCMC 1 cut(s) 690
BseXI GCAGC 3 cut(s) 92, 1231, 1523
BseYI CCCAGC 1 cut(s) 1179
BsgI GTGCAG 1 cut(s) 1302
BshFI GGCC 3 cut(s) 77, 611, 764
BshVI ATCGAT 2 cut(s) 1465, 1535
BsiHKCI CYCGRG 1 cut(s) 491
BsiSI CCGG 2 cut(s) 525, 914
BslFI GGGAC 1 cut(s) 831
BslI CCNNNNNNNGG 1 cut(s) 673
BsmAI GTCTC 3 cut(s) 139, 227, 1461
BsmBI CGTCTC 1 cut(s) 139
BsmFI GGGAC 1 cut(s) 831
BsnI GGCC 3 cut(s) 77, 611, 764
BsoBI CYCGRG 1 cut(s) 491
Bsp1286I GDGCHC 3 cut(s) 690, 714, 1180
Bsp19I CCATGG 1 cut(s) 63
BspACI CCGC 2 cut(s) 78, 1503
BspANI GGCC 3 cut(s) 77, 611, 764
BspCNI CTCAG 5 cut(s) 127, 433, 1081, 1102, 1468
BspDI ATCGAT 2 cut(s) 1465, 1535
BspHI TCATGA 2 cut(s) 393, 549
BspLI GGNNCC 3 cut(s) 431, 489, 1177
BspMAI CTGCAG 1 cut(s) 1133
BspMI ACCTGC 2 cut(s) 441, 1122
BspPI GGATC 6 cut(s) 58, 161, 482, 495, 1200, 1538
BsrI ACTGG 1 cut(s) 1171
BssECI CCNNGG 6 cut(s) 63, 523, 765, 849, 1199, 1368
BssNI GRCGYC 1 cut(s) 173
BssT1I CCWWGG 3 cut(s) 63, 1199, 1368
Bst2UI CCWGG 4 cut(s) 221, 608, 851, 1348
Bst4CI ACNGT 3 cut(s) 29, 150, 904
Bst6I CTCTTC 2 cut(s) 15, 298
BstACI GRCGYC 1 cut(s) 173
BstC8I GCNNGC 2 cut(s) 438, 839
BstDEI CTNAG 6 cut(s) 114, 157, 441, 1089, 1110, 1476
BstDSI CCRYGG 2 cut(s) 63, 765
BstF5I GGATG 6 cut(s) 775, 802, 1099, 1195, 1216, 1546
BstHHI GCGC 1 cut(s) 843
BstMAI GTCTC 3 cut(s) 139, 227, 1461
BstMWI GCNNNNNNNGC 3 cut(s) 718, 1492, 1517
BstNI CCWGG 4 cut(s) 221, 608, 851, 1348
BstNSI RCATGY 1 cut(s) 416
BstSCI CCNGG 5 cut(s) 219, 523, 606, 849, 1346
BstSFI CTRYAG 1 cut(s) 1129
BstSLI GKGCMC 1 cut(s) 690
BstV1I GCAGC 3 cut(s) 92, 1231, 1523
BstV2I GAAGAC 1 cut(s) 168
BstX2I RGATCY 3 cut(s) 153, 487, 1120
BstXI CCANNNNNNTGG 1 cut(s) 1160
BstYI RGATCY 3 cut(s) 153, 487, 1120
Bsu15I ATCGAT 2 cut(s) 1465, 1535
Bsu36I CCTNAGG 1 cut(s) 1089
BsuI GTATCC 1 cut(s) 1023
BsuRI GGCC 3 cut(s) 77, 611, 764
BsuTUI ATCGAT 2 cut(s) 1465, 1535
BtgI CCRYGG 2 cut(s) 63, 765
BtgZI GCGATG 1 cut(s) 1496
BtsCI GGATG 6 cut(s) 775, 802, 1099, 1195, 1216, 1546
BtsIMutI CAGTG 1 cut(s) 819
BveI ACCTGC 2 cut(s) 441, 1122
Cac8I GCNNGC 2 cut(s) 438, 839
CciI TCATGA 2 cut(s) 393, 549
CfoI GCGC 1 cut(s) 843
Cfr13I GGNCC 1 cut(s) 762
ClaI ATCGAT 2 cut(s) 1465, 1535
CseI GACGC 3 cut(s) 162, 1415, 1418
Csp6I GTAC 5 cut(s) 30, 91, 994, 1164, 1249
CviAII CATG 8 cut(s) 64, 208, 364, 394, 413, 550, 691, 958
CviQI GTAC 5 cut(s) 30, 91, 994, 1164, 1249
DdeI CTNAG 6 cut(s) 114, 157, 441, 1089, 1110, 1476
EaeI YGGCCR 2 cut(s) 75, 609
Eam1104I CTCTTC 2 cut(s) 15, 298
EarI CTCTTC 2 cut(s) 15, 298
Eco130I CCWWGG 3 cut(s) 63, 1199, 1368
Eco24I GRGCYC 2 cut(s) 714, 1180
Eco32I GATATC 1 cut(s) 652
Eco57I CTGAAG 3 cut(s) 845, 951, 962
Eco81I CCTNAGG 1 cut(s) 1089
Eco88I CYCGRG 1 cut(s) 491
EcoRI GAATTC 1 cut(s) 1309
EcoRII CCWGG 4 cut(s) 219, 606, 849, 1346
EcoRV GATATC 1 cut(s) 652
EcoT14I CCWWGG 3 cut(s) 63, 1199, 1368
EcoT38I GRGCYC 2 cut(s) 714, 1180
ErhI CCWWGG 3 cut(s) 63, 1199, 1368
Esp3I CGTCTC 1 cut(s) 139
FaeI CATG 8 cut(s) 67, 211, 367, 397, 416, 553, 694, 961
FalI AAGNNNNNCTT 2 cut(s) 295, 327
FaqI GGGAC 1 cut(s) 831
FatI CATG 8 cut(s) 63, 207, 363, 393, 412, 549, 690, 957
FauI CCCGC 1 cut(s) 1496
Fnu4HI GCNGC 4 cut(s) 78, 81, 1245, 1512
FokI GGATG 6 cut(s) 782, 809, 1106, 1182, 1223, 1553
FriOI GRGCYC 2 cut(s) 714, 1180
Fsp4HI GCNGC 4 cut(s) 78, 81, 1245, 1512
FspBI CTAG 4 cut(s) 890, 1274, 1332, 1460
GlaI GCGC 1 cut(s) 842
GluI GCNGC 4 cut(s) 78, 81, 1245, 1512
GsaI CCCAGC 1 cut(s) 1183
GsuI CTGGAG 4 cut(s) 201, 242, 1188, 1330
HaeIII GGCC 3 cut(s) 77, 611, 764
HapII CCGG 2 cut(s) 525, 914
HgaI GACGC 3 cut(s) 162, 1415, 1418
HhaI GCGC 1 cut(s) 843
Hin1I GRCGYC 1 cut(s) 173
Hin1II CATG 8 cut(s) 67, 211, 367, 397, 416, 553, 694, 961
Hin6I GCGC 1 cut(s) 841
HinP1I GCGC 1 cut(s) 841
HincII GTYRAC 1 cut(s) 1150
HindII GTYRAC 1 cut(s) 1150
HindIII AAGCTT 1 cut(s) 467
HinfI GANTC 4 cut(s) 100, 617, 877, 1341
HpaII CCGG 2 cut(s) 525, 914
HphI GGTGA 3 cut(s) 329, 542, 1461
Hpy166II GTNNAC 2 cut(s) 1150, 1264
Hpy188I TCNGA 7 cut(s) 117, 385, 419, 507, 703, 787, 1111
Hpy8I GTNNAC 2 cut(s) 1150, 1264
Hpy99I CGWCG 1 cut(s) 1271
HpyAV CCTTC 1 cut(s) 753
HpyCH4III ACNGT 3 cut(s) 29, 150, 904
HpyCH4IV ACGT 1 cut(s) 1146
HpyCH4V TGCA 5 cut(s) 986, 1050, 1131, 1143, 1319
HpyF10VI GCNNNNNNNGC 3 cut(s) 718, 1492, 1517
HpyF3I CTNAG 6 cut(s) 114, 157, 441, 1089, 1110, 1476
HpySE526I ACGT 1 cut(s) 1146
Hsp92I GRCGYC 1 cut(s) 173
Hsp92II CATG 8 cut(s) 67, 211, 367, 397, 416, 553, 694, 961
HspAI GCGC 1 cut(s) 841
LmnI GCTCC 5 cut(s) 196, 931, 1175, 1369, 1492
Lsp1109I GCAGC 3 cut(s) 92, 1231, 1523
LweI GCATC 4 cut(s) 797, 1084, 1344, 1473
MaeI CTAG 4 cut(s) 890, 1274, 1332, 1460
MaeII ACGT 1 cut(s) 1146
MboII GAAGA 7 cut(s) 32, 168, 315, 379, 584, 955, 1363
MflI RGATCY 3 cut(s) 153, 487, 1120
MhlI GDGCHC 3 cut(s) 690, 714, 1180
MlsI TGGCCA 1 cut(s) 611
MluCI AATT 7 cut(s) 736, 747, 987, 1082, 1285, 1309, 1554
MluNI TGGCCA 1 cut(s) 611
MlyI GAGTC 1 cut(s) 1335
Mox20I TGGCCA 1 cut(s) 611
MroXI GAANNNNTTC 1 cut(s) 858
MscI TGGCCA 1 cut(s) 611
MseI TTAA 4 cut(s) 213, 252, 374, 1376
Msp20I TGGCCA 1 cut(s) 611
MspA1I CMGCKG 1 cut(s) 1475
MspI CCGG 2 cut(s) 525, 914
MspR9I CCNGG 5 cut(s) 221, 525, 608, 851, 1348
MvaI CCWGG 4 cut(s) 221, 608, 851, 1348
MwoI GCNNNNNNNGC 3 cut(s) 718, 1492, 1517
NciI CCSGG 1 cut(s) 525
NcoI CCATGG 1 cut(s) 63
NlaIII CATG 8 cut(s) 67, 211, 367, 397, 416, 553, 694, 961
NlaIV GGNNCC 3 cut(s) 431, 489, 1177
NspI RCATGY 1 cut(s) 416
PagI TCATGA 2 cut(s) 393, 549
PcsI WCGNNNNNNNCGW 2 cut(s) 33, 1002
PdmI GAANNNNTTC 1 cut(s) 858
PfeI GAWTC 3 cut(s) 100, 617, 877
PfoI TCCNGGA 1 cut(s) 1346
PkrI GCNGC 4 cut(s) 79, 82, 1246, 1513
PleI GAGTC 1 cut(s) 1335
PpsI GAGTC 1 cut(s) 1335
Psp1406I AACGTT 1 cut(s) 1146
Psp6I CCWGG 4 cut(s) 219, 606, 849, 1346
PspFI CCCAGC 1 cut(s) 1179
PspGI CCWGG 4 cut(s) 219, 606, 849, 1346
PspN4I GGNNCC 3 cut(s) 431, 489, 1177
PspPI GGNCC 1 cut(s) 762
PstI CTGCAG 1 cut(s) 1133
PsuI RGATCY 3 cut(s) 153, 487, 1120
PvuII CAGCTG 1 cut(s) 1475
RsaI GTAC 5 cut(s) 31, 92, 995, 1165, 1250
RsaNI GTAC 5 cut(s) 30, 91, 994, 1164, 1249
SaqAI TTAA 4 cut(s) 213, 252, 374, 1376
SatI GCNGC 4 cut(s) 78, 81, 1245, 1512
Sau96I GGNCC 1 cut(s) 762
SchI GAGTC 1 cut(s) 1335
ScrFI CCNGG 5 cut(s) 221, 525, 608, 851, 1348
SduI GDGCHC 3 cut(s) 690, 714, 1180
SfaNI GCATC 4 cut(s) 797, 1084, 1344, 1473
SfcI CTRYAG 1 cut(s) 1129
SmlI CTYRAG 1 cut(s) 1436
SmoI CTYRAG 1 cut(s) 1436
Sse9I AATT 7 cut(s) 736, 747, 987, 1082, 1285, 1309, 1554
SsiI CCGC 2 cut(s) 78, 1503
SspI AATATT 1 cut(s) 355
SspMI CTAG 4 cut(s) 890, 1274, 1332, 1460
StyD4I CCNGG 5 cut(s) 219, 523, 606, 849, 1346
StyI CCWWGG 3 cut(s) 63, 1199, 1368
TaaI ACNGT 3 cut(s) 29, 150, 904
TaiI ACGT 1 cut(s) 1149
TaqI TCGA 5 cut(s) 53, 96, 273, 1465, 1535
TasI AATT 7 cut(s) 736, 747, 987, 1082, 1285, 1309, 1554
TatI WGTACW 1 cut(s) 90
TauI GCSGC 1 cut(s) 80
TfiI GAWTC 3 cut(s) 100, 617, 877
Tru1I TTAA 4 cut(s) 213, 252, 374, 1376
Tru9I TTAA 4 cut(s) 213, 252, 374, 1376
TscAI CASTG 1 cut(s) 826
TseI GCWGC 3 cut(s) 80, 1244, 1511
TspGWI ACGGA 2 cut(s) 47, 782
TspRI CASTG 1 cut(s) 826
XapI RAATTY 4 cut(s) 736, 1082, 1285, 1309
XbaI TCTAGA 1 cut(s) 1459
XceI RCATGY 1 cut(s) 416
XcmI CCANNNNNNNNNTGG 1 cut(s) 70
XmnI GAANNNNTTC 1 cut(s) 858
XspI CTAG 4 cut(s) 890, 1274, 1332, 1460
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.