Rorug06G0387700

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0010799
Physical Location & Seq
Forward (+)
53276404 .. 53279120
2717 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0387700.1

Sequence Viewer

Length: 2013 bp
ATGGCGCCGAGCACGATCCGGAAGGCGATCGGAGCCGTCAAGGACCAGACGAGCATCGGAATCGCGAAGGTCGCCAGCAACATGGCGCCGGACCTGGAGGTCGCCATCGTGAAGGCCACCAGCCACGAGGACGAGCCGGCCGGCGAGAAGTACATCCGGGAGATCCTCCAGCTGACGTCATACTCCCGGGGATACGTCCACGCGTGCGTGTCGGCGGTGTCGAAGCGACTGGGGAAGACGCGCGACTGGATCGTGGCGCTCAAGGCGTTGATACTGGTGCACCGCCTCATGAACGACGGCGACCCTGTCTTCCAGGACGAGATCCTCTACGCCACGCGCAAGGGCACCAGGCTGCTGAACCTGTCCGATTTCAGGGACGAGGCTCACTCCAGCTCATGGGATCACTCTGCCTTTGTGAGGACTTTTGCTATGTACTTGGACCAGAGGCTTGATTTGATTCTTTTCGAGAGGAAGGGTGGTAGTGGTACTACTCCGGCCAGGGACCTGGGGTCTAATTCCAGAGACAGCGGCGGTTCTGGAAATTTCCGGTCTCCGCCGCCGAGGCCGAACTATGAGTATGAGTATGGGGGAGAGGCCAGGGAGTATGAGAATGGAGGAGGGATGAGGCGGTCCAGATCTTATGACTATGATAATGGAGGAGGAATGAGGAGGTCAAGGTCTTATGGAGATGTGAGTGAGTCTGCGAAATCGGAGAAGAGAGTTGTGACTCCGTTGAGGGAAATGAAGCCGGAGAGGATTTTCGGCAAAATGGGGCACTTGCAGAGGCTATTGGATCGGTTTCTGTCGATCCGGCCCACGGGGTTGGCCAAGAACAATAGGATGATTCTGATTGCTTTGTACCCGGTGGTGAGGGAGAGCTTTCAGCTGTATGCCGATATTTGCGAGGTTTTGGCGGTTTTGCTTGATAAGTTTTTCGATATGGAGTATACCGATTGTGTGAAGGCGTTTGAGGCTTATGCCAGTGCGGCTAAGCAGATTGATGAGCTTGTTGCGTTCTATAGTTGGTGCAAGGACACTGGGGTTGCCAGGTCGTCAGAGTATCCAGAGATTCAGAAGATTGGGAGTAAGTTATTGGAGACATTGGAGGAGTTTGTGAGGGACAGAAGTAAGAGAGGCAAGAGTCCTGAAAGGAGACAGGAGCTTCCGGCTCCGGTGGCTCAGGAGGAGGAGCCCCAACCTGATATGAATGAGATGAAGGCTTTGCCTGCGCCGGAGAATTGGACTCCTCCACCCCCACCTGAGCCGGAGCCGGAGCCTCAGCCAAAGCCTCAACCAGTGGTCCAAGAAGACTTGGTGGATTTGAGAGATAATGGGGTTTCAGCTGATAATCAGGGGAATAACATGGCTTTGGCTTTGTTTGCTGGTCCTGCCGCCAATGGCAATACAAATGGTTCTTGGGAAGCGTTCCCTTCAGATGGGCAGCCCCAAGTCACCTCAGCTTGGCAGAATCCGGCTGCAGAACCCGGAAAGGCCGATTGGGAACTTGCTCTGGTCGAGACAGCAAGCAATTTAAACCACCAGCAAGCAGCAATGGGTGGTGGATTGGATCCATTGTTGTTGAATGGTATGTATGATCAGGGCATTGTGAGGCAGCATGTCGGCACTGCCCAATTGAGTGGTGGAAGTGCAAGTAGTGTTGCATTGCCCGGGCCCGGGAAGAGCGCTACACCCGTATTAGCTCTTCCCGCCCCTGACGGCACAGTGATGCCAGTGAATCAGGACCCGTTTGCTGCATCATTGATCATTCCACCTCCTTCCTATGTGCAAATGGCTGATATGGAGAAGAAGCAGCATTTACTTGTGCAGGAACAGCAGGTGTGGAATCAATATGCCAAGGAAGGAATGCAGGGCCAGACTAGCTTGGCCAAAATGAACGGGGCCGGGGCCGGGGCCGGGTTCTACGGGGCACCTCCCATGCAGATGATGCCGTATGGAATGCCTCCGGTGAACAGAATGGGGCCACCCGCCGGGTATTACTACGCTCCTTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_C

Protein Analysis

670

Amino Acids

73.51

Weight (kDa)

5.55

Isoelectric Point (pI)

51.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANTH PF07651 31 - 153 5.3e-37 ANTH domain
ANTH PF07651 233 - 374 2.3e-37 ANTH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010799)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G33080 AT4G33080
fragaria_vesca FvH4_2g31460 FvH4_2g31460
malus_domestica MD08G1066200.v1.1 MD15G1055000.v1.1
prunus_persica Prupe.1G408200_v2.0.a1
pyrus_communis pycom08g05490 pycom15g05190
rosa_chinensis RchiOBHm_Chr6g0311341
rosa_laevigata RLG00000010415
rosa_multiflora Rmu_sc0008536.1_g000007
rosa_roxburghii Rroxscaffold_7G00157700
rosa_rugosa Rorug06G0387700 Rorug06G0387700
rosa_samantha Rh6AG502400 Rh6BG513000 Rh6CG518800 Rh6DG505000
rosa_wichuraiana Rw6G043750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1825
AasI GACNNNNNNGTC 1 cut(s) 98
AatII GACGTC 1 cut(s) 179
Acc36I ACCTGC 1 cut(s) 1825
AccB1I GGYRCC 4 cut(s) 4, 85, 344, 1927
AccB7I CCANNNNNTGG 1 cut(s) 396
AccI GTMKAC 1 cut(s) 947
AccII CGCG 5 cut(s) 65, 203, 241, 243, 337
AccIII TCCGGA 1 cut(s) 18
AclWI GGATC 9 cut(s) 10, 157, 257, 316, 408, 801, 802, 1562, 1575
AcoI YGGCCR 4 cut(s) 138, 495, 825, 1884
AcsI RAATTY 1 cut(s) 541
AcuI CTGAAG 1 cut(s) 1416
AcyI GRCGYC 3 cut(s) 5, 86, 176
AfaI GTAC 4 cut(s) 152, 434, 487, 860
AfeI AGCGCT 1 cut(s) 1684
AflIII ACRYGT 1 cut(s) 201
AgsI TTSAA 1 cut(s) 1582
AhdI GACNNNNNGTC 1 cut(s) 508
AjnI CCWGG 7 cut(s) 93, 312, 347, 497, 504, 596, 1046
AjuI GAANNNNNNNTTGG 2 cut(s) 1480, 1512
Alw21I GWGCWC 2 cut(s) 14, 282
Alw26I GTCTC 5 cut(s) 516, 555, 1091, 1147, 1511
Alw44I GTGCAC 1 cut(s) 278
AlwI GGATC 9 cut(s) 10, 157, 257, 316, 408, 801, 802, 1562, 1575
Ama87I CYCGRG 3 cut(s) 186, 1667, 1673
Aor13HI TCCGGA 1 cut(s) 18
Aor51HI AGCGCT 1 cut(s) 1684
ApaI GGGCCC 1 cut(s) 1674
ApaLI GTGCAC 1 cut(s) 278
ApeKI GCWGC 7 cut(s) 352, 1441, 1475, 1547, 1612, 1751, 1810
ApoI RAATTY 1 cut(s) 541
AspLEI GCGC 7 cut(s) 7, 88, 243, 259, 339, 1231, 1685
AsuHPI GGTGA 3 cut(s) 880, 1444, 1978
AvaI CYCGRG 3 cut(s) 186, 1667, 1673
AvaII GGWCC 8 cut(s) 43, 91, 439, 502, 630, 1300, 1385, 1741
BaeGI GKGCMC 5 cut(s) 282, 347, 777, 1674, 1930
BalI TGGCCA 2 cut(s) 827, 1886
BamHI GGATCC 1 cut(s) 1567
BanI GGYRCC 4 cut(s) 4, 85, 344, 1927
BanII GRGCYC 2 cut(s) 1194, 1674
BarI GAAGNNNNNNTAC 2 cut(s) 1686, 1718
BauI CACGAG 1 cut(s) 125
BbsI GAAGAC 3 cut(s) 242, 301, 1314
Bbv12I GWGCWC 2 cut(s) 14, 282
BbvCI CCTCAGC 2 cut(s) 1278, 1456
BbvI GCAGC 7 cut(s) 339, 1453, 1462, 1559, 1624, 1738, 1822
BccI CCATC 2 cut(s) 113, 1430
BceAI ACGGC 4 cut(s) 20, 313, 1732, 1933
BcgI CGANNNNNNTGC 2 cut(s) 43, 77
BciT130I CCWGG 7 cut(s) 95, 314, 349, 499, 506, 598, 1048
BciVI GTATCC 2 cut(s) 185, 1071
BclI TGATCA 2 cut(s) 1594, 1761
BcoDI GTCTC 5 cut(s) 516, 555, 1091, 1147, 1511
BfaI CTAG 1 cut(s) 1878
BfmI CTRYAG 2 cut(s) 1018, 1476
BfoI RGCGCY 4 cut(s) 8, 89, 260, 1686
BfuAI ACCTGC 1 cut(s) 1825
BfuI GTATCC 2 cut(s) 185, 1071
BglI GCCNNNNNGGC 2 cut(s) 562, 986
BglII AGATCT 1 cut(s) 635
BlpI GCTNAGC 1 cut(s) 990
Bme18I GGWCC 8 cut(s) 43, 91, 439, 502, 630, 1300, 1385, 1741
BmeRI GACNNNNNGTC 1 cut(s) 508
BmeT110I CYCGRG 3 cut(s) 186, 1667, 1673
BmrI ACTGGG 2 cut(s) 239, 1047
BmsI GCATC 4 cut(s) 63, 1716, 1763, 1935
BmuI ACTGGG 2 cut(s) 239, 1047
BpiI GAAGAC 3 cut(s) 242, 301, 1314
BplI GAGNNNNNCTC 2 cut(s) 371, 403
BpmI CTGGAG 3 cut(s) 116, 152, 373
Bpu10I CCTNAGC 4 cut(s) 1179, 1260, 1278, 1456
Bpu1102I GCTNAGC 1 cut(s) 990
BpuEI CTTGAG 1 cut(s) 245
BsaHI GRCGYC 3 cut(s) 5, 86, 176
BsaI GGTCTC 1 cut(s) 555
BsaWI WCCGGW 4 cut(s) 18, 546, 1171, 1963
Bse118I RCCGGY 2 cut(s) 136, 140
Bse1I ACTGG 7 cut(s) 234, 251, 279, 981, 1042, 1295, 1730
Bse3DI GCAATG 2 cut(s) 1557, 1661
BseAI TCCGGA 1 cut(s) 18
BseBI CCWGG 7 cut(s) 95, 314, 349, 499, 506, 598, 1048
BseGI GGATG 3 cut(s) 153, 627, 846
BseMI GCAATG 2 cut(s) 1557, 1661
BseMII CTCAG 4 cut(s) 1193, 1251, 1292, 1470
BseNI ACTGG 7 cut(s) 234, 251, 279, 981, 1042, 1295, 1730
BseRI GAGGAG 7 cut(s) 630, 672, 682, 1121, 1199, 1202, 1236
BseSI GKGCMC 5 cut(s) 282, 347, 777, 1674, 1930
BseX3I CGGCCG 1 cut(s) 138
BseXI GCAGC 7 cut(s) 339, 1453, 1462, 1559, 1624, 1738, 1822
BsgI GTGCAG 1 cut(s) 1844
Bsh1236I CGCG 5 cut(s) 65, 203, 241, 243, 337
Bsh1285I CGRYCG 2 cut(s) 30, 141
BshNI GGYRCC 4 cut(s) 4, 85, 344, 1927
BsiEI CGRYCG 2 cut(s) 30, 141
BsiHKAI GWGCWC 2 cut(s) 14, 282
BsiHKCI CYCGRG 3 cut(s) 186, 1667, 1673
BslFI GGGAC 3 cut(s) 389, 515, 1133
BsmAI GTCTC 5 cut(s) 516, 555, 1091, 1147, 1511
BsmFI GGGAC 3 cut(s) 389, 515, 1133
BsmI GAATGC 2 cut(s) 1869, 1962
Bso31I GGTCTC 1 cut(s) 555
BsoBI CYCGRG 3 cut(s) 186, 1667, 1673
Bsp120I GGGCCC 1 cut(s) 1670
Bsp1286I GDGCHC 7 cut(s) 14, 282, 347, 777, 1194, 1674, 1930
Bsp13I TCCGGA 1 cut(s) 18
Bsp1720I GCTNAGC 1 cut(s) 990
Bsp68I TCGCGA 1 cut(s) 65
BspCNI CTCAG 4 cut(s) 1192, 1252, 1291, 1469
BspEI TCCGGA 1 cut(s) 18
BspFNI CGCG 5 cut(s) 65, 203, 241, 243, 337
BspHI TCATGA 1 cut(s) 288
BspMAI CTGCAG 1 cut(s) 1480
BspMI ACCTGC 1 cut(s) 1825
BspPI GGATC 9 cut(s) 10, 157, 257, 316, 408, 801, 802, 1562, 1575
BspQI GCTCTTC 2 cut(s) 1673, 1707
BspT107I GGYRCC 4 cut(s) 4, 85, 344, 1927
BspTNI GGTCTC 1 cut(s) 555
BsrDI GCAATG 2 cut(s) 1557, 1661
BsrFI RCCGGY 2 cut(s) 136, 140
BsrI ACTGG 7 cut(s) 234, 251, 279, 981, 1042, 1295, 1730
BssAI RCCGGY 2 cut(s) 136, 140
BssNAI GTATAC 1 cut(s) 948
BssNI GRCGYC 3 cut(s) 5, 86, 176
BssSI CACGAG 1 cut(s) 125
BssT1I CCWWGG 1 cut(s) 1854
Bst1107I GTATAC 1 cut(s) 948
Bst2BI CACGAG 1 cut(s) 125
Bst2UI CCWGG 7 cut(s) 95, 314, 349, 499, 506, 598, 1048
Bst4CI ACNGT 1 cut(s) 1723
Bst6I CTCTTC 3 cut(s) 710, 1673, 1707
BstACI GRCGYC 3 cut(s) 5, 86, 176
BstAPI GCANNNNNTGC 1 cut(s) 1945
BstC8I GCNNGC 7 cut(s) 76, 138, 142, 205, 1227, 1525, 1545
BstDEI CTNAG 5 cut(s) 990, 1179, 1260, 1278, 1456
BstDSI CCRYGG 1 cut(s) 816
BstENI CCTNNNNNAGG 1 cut(s) 415
BstF5I GGATG 3 cut(s) 153, 627, 846
BstFNI CGCG 5 cut(s) 65, 203, 241, 243, 337
BstH2I RGCGCY 4 cut(s) 8, 89, 260, 1686
BstHHI GCGC 7 cut(s) 7, 88, 243, 259, 339, 1231, 1685
BstMAI GTCTC 5 cut(s) 516, 555, 1091, 1147, 1511
BstMCI CGRYCG 2 cut(s) 30, 141
BstNI CCWGG 7 cut(s) 95, 314, 349, 499, 506, 598, 1048
BstNSI RCATGY 1 cut(s) 1619
BstSFI CTRYAG 2 cut(s) 1018, 1476
BstSLI GKGCMC 5 cut(s) 282, 347, 777, 1674, 1930
BstUI CGCG 5 cut(s) 65, 203, 241, 243, 337
BstV1I GCAGC 7 cut(s) 339, 1453, 1462, 1559, 1624, 1738, 1822
BstV2I GAAGAC 3 cut(s) 242, 301, 1314
BstX2I RGATCY 4 cut(s) 162, 321, 635, 1567
BstXI CCANNNNNNTGG 4 cut(s) 82, 505, 823, 1637
BstYI RGATCY 4 cut(s) 162, 321, 635, 1567
BstZ17I GTATAC 1 cut(s) 948
BstZI CGGCCG 1 cut(s) 138
BsuI GTATCC 2 cut(s) 185, 1071
BtgI CCRYGG 1 cut(s) 816
BtsCI GGATG 3 cut(s) 153, 627, 846
BtsI GCAGTG 1 cut(s) 1623
BtsIMutI CAGTG 6 cut(s) 988, 1035, 1302, 1623, 1728, 1737
BtuMI TCGCGA 1 cut(s) 65
BveI ACCTGC 1 cut(s) 1825
Cac8I GCNNGC 7 cut(s) 76, 138, 142, 205, 1227, 1525, 1545
CciI TCATGA 1 cut(s) 288
CfoI GCGC 7 cut(s) 7, 88, 243, 259, 339, 1231, 1685
Cfr10I RCCGGY 2 cut(s) 136, 140
Cfr9I CCCGGG 3 cut(s) 186, 1667, 1673
CseI GACGC 1 cut(s) 247
Csp6I GTAC 4 cut(s) 151, 433, 486, 859
CviAII CATG 6 cut(s) 82, 289, 396, 1363, 1616, 1936
CviQI GTAC 4 cut(s) 151, 433, 486, 859
DdeI CTNAG 5 cut(s) 990, 1179, 1260, 1278, 1456
DinI GGCGCC 2 cut(s) 6, 87
DraI TTTAAA 1 cut(s) 1533
DrdI GACNNNNNNGTC 1 cut(s) 98
DriI GACNNNNNGTC 1 cut(s) 508
DseDI GACNNNNNNGTC 1 cut(s) 98
EaeI YGGCCR 4 cut(s) 138, 495, 825, 1884
EagI CGGCCG 1 cut(s) 138
Eam1104I CTCTTC 3 cut(s) 710, 1673, 1707
Eam1105I GACNNNNNGTC 1 cut(s) 508
EarI CTCTTC 3 cut(s) 710, 1673, 1707
EciI GGCGGA 1 cut(s) 543
EclXI CGGCCG 1 cut(s) 138
Eco130I CCWWGG 1 cut(s) 1854
Eco24I GRGCYC 2 cut(s) 1194, 1674
Eco31I GGTCTC 1 cut(s) 555
Eco47I GGWCC 8 cut(s) 43, 91, 439, 502, 630, 1300, 1385, 1741
Eco47III AGCGCT 1 cut(s) 1684
Eco52I CGGCCG 1 cut(s) 138
Eco57I CTGAAG 1 cut(s) 1416
Eco88I CYCGRG 3 cut(s) 186, 1667, 1673
EcoNI CCTNNNNNAGG 1 cut(s) 415
EcoO109I RGGNCCY 2 cut(s) 502, 1741
EcoRII CCWGG 7 cut(s) 93, 312, 347, 497, 504, 596, 1046
EcoT14I CCWWGG 1 cut(s) 1854
EcoT38I GRGCYC 2 cut(s) 1194, 1674
EgeI GGCGCC 2 cut(s) 6, 87
EheI GGCGCC 2 cut(s) 6, 87
ErhI CCWWGG 1 cut(s) 1854
FaeI CATG 6 cut(s) 85, 292, 399, 1366, 1619, 1939
FaqI GGGAC 3 cut(s) 389, 515, 1133
FatI CATG 6 cut(s) 81, 288, 395, 1362, 1615, 1935
FauI CCCGC 2 cut(s) 1714, 1993
FbaI TGATCA 2 cut(s) 1594, 1761
FblI GTMKAC 1 cut(s) 947
FokI GGATG 3 cut(s) 140, 634, 853
FriOI GRGCYC 2 cut(s) 1194, 1674
FspBI CTAG 1 cut(s) 1878
GlaI GCGC 7 cut(s) 6, 87, 242, 258, 338, 1230, 1684
GsuI CTGGAG 3 cut(s) 116, 152, 373
HaeII RGCGCY 4 cut(s) 8, 89, 260, 1686
HgaI GACGC 1 cut(s) 247
HhaI GCGC 7 cut(s) 7, 88, 243, 259, 339, 1231, 1685
Hin1I GRCGYC 3 cut(s) 5, 86, 176
Hin1II CATG 6 cut(s) 85, 292, 399, 1366, 1619, 1939
Hin6I GCGC 7 cut(s) 5, 86, 241, 257, 337, 1229, 1683
HinP1I GCGC 7 cut(s) 5, 86, 241, 257, 337, 1229, 1683
HphI GGTGA 3 cut(s) 880, 1444, 1978
Hpy166II GTNNAC 4 cut(s) 199, 280, 948, 1969
Hpy188I TCNGA 8 cut(s) 32, 59, 367, 712, 849, 1057, 1074, 1435
Hpy8I GTNNAC 4 cut(s) 199, 280, 948, 1969
Hpy99I CGWCG 1 cut(s) 299
HpyAV CCTTC 9 cut(s) 16, 61, 106, 466, 955, 1210, 1440, 1785, 1853
HpyCH4III ACNGT 1 cut(s) 1723
HpyCH4IV ACGT 2 cut(s) 176, 195
HpyF3I CTNAG 5 cut(s) 990, 1179, 1260, 1278, 1456
HpySE526I ACGT 2 cut(s) 176, 195
Hsp92I GRCGYC 3 cut(s) 5, 86, 176
Hsp92II CATG 6 cut(s) 85, 292, 399, 1366, 1619, 1939
HspAI GCGC 7 cut(s) 5, 86, 241, 257, 337, 1229, 1683
KasI GGCGCC 2 cut(s) 4, 85
Kpn2I TCCGGA 1 cut(s) 18
KroI GCCGGC 2 cut(s) 136, 140
KroNI GCCGGC 2 cut(s) 138, 142
Ksp22I TGATCA 2 cut(s) 1594, 1761
LguI GCTCTTC 2 cut(s) 1673, 1707
LmnI GCTCC 7 cut(s) 32, 1159, 1174, 1189, 1267, 1273, 2008
Lsp1109I GCAGC 7 cut(s) 339, 1453, 1462, 1559, 1624, 1738, 1822
LweI GCATC 4 cut(s) 63, 1716, 1763, 1935
MaeI CTAG 1 cut(s) 1878
MaeII ACGT 2 cut(s) 176, 195
MaeIII GTNAC 2 cut(s) 724, 1450
MboII GAAGA 8 cut(s) 247, 301, 727, 1087, 1319, 1690, 1694, 1816
MfeI CAATTG 1 cut(s) 1631
MflI RGATCY 4 cut(s) 162, 321, 635, 1567
MhlI GDGCHC 7 cut(s) 14, 282, 347, 777, 1194, 1674, 1930
MlsI TGGCCA 2 cut(s) 827, 1886
MluCI AATT 5 cut(s) 514, 541, 1237, 1528, 1631
MluI ACGCGT 1 cut(s) 201
MluNI TGGCCA 2 cut(s) 827, 1886
Mly113I GGCGCC 2 cut(s) 5, 86
MlyI GAGTC 4 cut(s) 707, 721, 1150, 1237
Mox20I TGGCCA 2 cut(s) 827, 1886
MroI TCCGGA 1 cut(s) 18
MroNI GCCGGC 2 cut(s) 136, 140
MscI TGGCCA 2 cut(s) 827, 1886
MseI TTAA 1 cut(s) 1532
MslI CAYNNNNRTG 2 cut(s) 1724, 1940
Msp20I TGGCCA 2 cut(s) 827, 1886
MspA1I CMGCKG 4 cut(s) 172, 528, 886, 1343
MunI CAATTG 1 cut(s) 1631
Mva1269I GAATGC 2 cut(s) 1869, 1962
MvaI CCWGG 7 cut(s) 95, 314, 349, 499, 506, 598, 1048
MvnI CGCG 5 cut(s) 65, 203, 241, 243, 337
NaeI GCCGGC 2 cut(s) 138, 142
NarI GGCGCC 2 cut(s) 5, 86
NgoMIV GCCGGC 2 cut(s) 136, 140
NlaIII CATG 6 cut(s) 85, 292, 399, 1366, 1619, 1939
NmeAIII GCCGAG 2 cut(s) 33, 585
NmuCI GTSAC 2 cut(s) 724, 1450
NruI TCGCGA 1 cut(s) 65
NspI RCATGY 1 cut(s) 1619
PagI TCATGA 1 cut(s) 288
PaqCI CACCTGC 1 cut(s) 1825
PciSI GCTCTTC 2 cut(s) 1673, 1707
PcsI WCGNNNNNNNCGW 1 cut(s) 218
PctI GAATGC 2 cut(s) 1869, 1962
PdiI GCCGGC 2 cut(s) 138, 142
PfeI GAWTC 7 cut(s) 60, 457, 844, 1069, 1468, 1735, 1843
PflFI GACNNNGTC 1 cut(s) 305
PflMI CCANNNNNTGG 1 cut(s) 396
PfoI TCCNGGA 2 cut(s) 156, 312
Ple19I CGATCG 1 cut(s) 30
PleI GAGTC 4 cut(s) 706, 721, 1149, 1237
PluTI GGCGCC 2 cut(s) 8, 89
PpsI GAGTC 4 cut(s) 706, 721, 1149, 1237
PpuMI RGGWCCY 2 cut(s) 502, 1741
Psp5II RGGWCCY 2 cut(s) 502, 1741
Psp6I CCWGG 7 cut(s) 93, 312, 347, 497, 504, 596, 1046
PspGI CCWGG 7 cut(s) 93, 312, 347, 497, 504, 596, 1046
PspOMI GGGCCC 1 cut(s) 1670
PspPPI RGGWCCY 2 cut(s) 502, 1741
PstI CTGCAG 1 cut(s) 1480
PsuI RGATCY 4 cut(s) 162, 321, 635, 1567
PsyI GACNNNGTC 1 cut(s) 305
PvuI CGATCG 1 cut(s) 30
PvuII CAGCTG 3 cut(s) 172, 886, 1343
RruI TCGCGA 1 cut(s) 65
RsaI GTAC 4 cut(s) 152, 434, 487, 860
RsaNI GTAC 4 cut(s) 151, 433, 486, 859
RseI CAYNNNNRTG 2 cut(s) 1724, 1940
SapI GCTCTTC 2 cut(s) 1673, 1707
SaqAI TTAA 1 cut(s) 1532
SchI GAGTC 4 cut(s) 707, 721, 1150, 1237
SduI GDGCHC 7 cut(s) 14, 282, 347, 777, 1194, 1674, 1930
SfaNI GCATC 4 cut(s) 63, 1716, 1763, 1935
SfcI CTRYAG 2 cut(s) 1018, 1476
SfoI GGCGCC 2 cut(s) 6, 87
SinI GGWCC 8 cut(s) 43, 91, 439, 502, 630, 1300, 1385, 1741
SmaI CCCGGG 3 cut(s) 188, 1669, 1675
SmiMI CAYNNNNRTG 2 cut(s) 1724, 1940
SmlI CTYRAG 1 cut(s) 260
SmoI CTYRAG 1 cut(s) 260
SrfI GCCCGGGC 1 cut(s) 1669
Sse9I AATT 5 cut(s) 514, 541, 1237, 1528, 1631
SspDI GGCGCC 2 cut(s) 4, 85
SspMI CTAG 1 cut(s) 1878
StyI CCWWGG 1 cut(s) 1854
TaaI ACNGT 1 cut(s) 1723
TaiI ACGT 2 cut(s) 179, 198
TaqI TCGA 5 cut(s) 221, 465, 806, 936, 1515
TasI AATT 5 cut(s) 514, 541, 1237, 1528, 1631
TatI WGTACW 2 cut(s) 150, 432
TauI GCSGC 4 cut(s) 531, 559, 989, 1394
TfiI GAWTC 7 cut(s) 60, 457, 844, 1069, 1468, 1735, 1843
Tru1I TTAA 1 cut(s) 1532
Tru9I TTAA 1 cut(s) 1532
TscAI CASTG 6 cut(s) 988, 1042, 1302, 1630, 1728, 1737
TseFI GTSAC 2 cut(s) 724, 1450
TseI GCWGC 7 cut(s) 352, 1441, 1475, 1547, 1612, 1751, 1810
Tsp45I GTSAC 2 cut(s) 724, 1450
TspDTI ATGAA 5 cut(s) 305, 758, 1220, 1229, 1907
TspGWI ACGGA 1 cut(s) 720
TspMI CCCGGG 3 cut(s) 186, 1667, 1673
TspRI CASTG 6 cut(s) 988, 1042, 1302, 1630, 1728, 1737
Tth111I GACNNNGTC 1 cut(s) 305
Van91I CCANNNNNTGG 1 cut(s) 396
VneI GTGCAC 1 cut(s) 278
VpaK11BI GGWCC 8 cut(s) 43, 91, 439, 502, 630, 1300, 1385, 1741
XagI CCTNNNNNAGG 1 cut(s) 415
XapI RAATTY 1 cut(s) 541
XceI RCATGY 1 cut(s) 1619
XcmI CCANNNNNNNNNTGG 1 cut(s) 1637
XmaI CCCGGG 3 cut(s) 186, 1667, 1673
XmiI GTMKAC 1 cut(s) 947
XspI CTAG 1 cut(s) 1878
ZraI GACGTC 1 cut(s) 177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.