RchiOBHm_Chr6g0311341

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Forward (+)
68318001 .. 68324399
6399 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ27999

Sequence Viewer

Length: 1521 bp
ATGGAGGATCGACTGGAGGAGGAAGGAGAAGGAGAAGGAGAGGAGGTGTTAGGTTCGAGCTTGACGATGGAGAAGGTCGCAGCAGCCAAGCAGTTCATAGAGAACCACTACAGAGCTCAGAGGAAGAACATACAAGAACGAAAAGAAAGACGATGGGTTTTGGAAAGGAAATTAGCTTCATCAGACGTGCCAAAGGAGGTACAAATCAACCTGATCAAAGATTTAGAGCGAAAAGAGACGGAGTTCATGCGACTTAAAAGGCATAGGATATGTGTTGACGATTTTGAGCCTTTGACCATCATTGGTAGGGGGGCTTTTGGTGAGGTTCGATTGTGTCGGGAGAAAAAATCTGGCAATATATATGCCATGAAAAAGTTGAAGAAATCTGAAATGCTTATGAGAGGACAGGTGGAACATGTTAGAGCTGAAAGAAACTTGCTGGCAGAAGTTGCCAGTCATTGCATAGTTAAACTTTACTACTCCTTTCAGGATGCTGAGTATTTATATTTAATAATGGAATATCTGCCTGGTGGTGACATGATGACTCTGCTGATGAGGGAGGACACCTTAAATGAAAGTGTGGCCAAATTTTACATTGCACAGAGTGTACTGGCAATAGAATCTATTCAGAAACACAACTACATACACAGAGACATTAAACCCGACAACCTTCTTCTAGATAAAAACGGTCACATGAAACTCTCGGATTTTGGCCTCTGTAAGCCTCTTGATTGTACAACTTTACCTGCACTGCATGAAAATAGATCTATGGATGATGAAAATTCAGCAGAACCAATGGATATCGATGGATGTTTTCCTGATGCGGATAACAGGAATAGTTGGAAAAGCCCCCTTGAACAGCTGCAGCATTGGCAGATGAACAGGAGGAAGCTGGCATTTTCGACTGTGGGGACACCCGACTATATTGCACCTGAAGTGTTATTAAAGAAGGGATATGGGATGGAATGCGACTGGTGGTCACTGGGAGCAATACTGTATGAAATGCTTGTTGGATACCCTCCATTTTATTCAGATGATCCCATAACTACATGCAGAAAGATTGTTCATTGGAGAAATCATTTAAAATTTCCAGAAGATGCAAGGCTGACACTCGAGGCTAAGGATCTCATTTGCAGGTTGCTGTGTGATGTTGAACATAGGCTTGGTGCACGTCAAATCAAATCTCATCCTTGGTTCAAGGACATTGTGTGGGACAAACTTTATGAAATGGAGGCAGCATTCAAACCAGAAGTGAATGGGGAGCTTGATACCCAAAACTTTATGAAGTTTGATGAGCTGGATCCTCCAGCATCAGCAAGAACTGGTTCAGGACCCTCGCGGAAGCTGCAATTGACTCCCAAAGATCTAAACTTTGTTGGCTATACATACAAGAACTTTGATGCTGTAAAAGGGCTTCGCCAAGCTTTTGCTGATGCTCGAGTAGAATTCACTACTGAACGGGCAGCAAGAGAAACAGAGGTACAAATGCTTGCATCATCTGGTGATCCTATGTTACCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

506

Amino Acids

58.62

Weight (kDa)

5.83

Isoelectric Point (pI)

31.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 96 - 244 5.2e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 100 - 243 3.1e-22 Protein tyrosine and serine/threonine kinase
ABC1 PF03109 169 - 245 1.2e-06 ABC1 atypical kinase-like domain
Pkinase PF00069 293 - 399 2.5e-22 Protein kinase domain
Pkinase_C PF00433 418 - 463 1.6e-06 Protein kinase C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010799)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 754, 1125
AccII CGCG 1 cut(s) 1339
AciI CCGC 2 cut(s) 824, 1339
AclWI GGATC 6 cut(s) 15, 1031, 1131, 1295, 1308, 1499
AcoI YGGCCR 1 cut(s) 582
AcsI RAATTY 4 cut(s) 587, 781, 1085, 1445
AcuI CTGAAG 1 cut(s) 954
AdeI CACNNNGTG 1 cut(s) 605
AfaI GTAC 4 cut(s) 201, 609, 736, 1482
AflIII ACRYGT 1 cut(s) 415
AgsI TTSAA 5 cut(s) 379, 857, 1154, 1198, 1243
AhdI GACNNNNNGTC 1 cut(s) 976
AjiI CACGTC 2 cut(s) 187, 1172
AjnI CCWGG 1 cut(s) 526
AjuI GAANNNNNNNTTGG 4 cut(s) 993, 1025, 1146, 1178
Alw21I GWGCWC 2 cut(s) 118, 1171
Alw26I GTCTC 2 cut(s) 230, 645
Alw44I GTGCAC 1 cut(s) 1167
AlwI GGATC 6 cut(s) 15, 1031, 1131, 1295, 1308, 1499
Ama87I CYCGRG 2 cut(s) 1112, 1437
AoxI GGCC 2 cut(s) 582, 712
ApaLI GTGCAC 1 cut(s) 1167
ApeKI GCWGC 7 cut(s) 80, 83, 862, 865, 1235, 1345, 1463
ApoI RAATTY 4 cut(s) 587, 781, 1085, 1445
Asp700I GAANNNNTTC 2 cut(s) 624, 1324
AspS9I GGNCC 1 cut(s) 1331
AsuHPI GGTGA 3 cut(s) 332, 545, 1514
AvaI CYCGRG 2 cut(s) 1112, 1437
AvaII GGWCC 1 cut(s) 1331
BaeGI GKGCMC 1 cut(s) 1171
BalI TGGCCA 1 cut(s) 584
BamHI GGATCC 1 cut(s) 1300
BanII GRGCYC 1 cut(s) 118
BarI GAAGNNNNNNTAC 2 cut(s) 1398, 1430
Bbv12I GWGCWC 2 cut(s) 118, 1171
BbvI GCAGC 7 cut(s) 92, 95, 849, 877, 1247, 1332, 1475
BccI CCATC 5 cut(s) 61, 147, 305, 800, 955
BcgI CGANNNNNNTGC 2 cut(s) 908, 942
BciT130I CCWGG 1 cut(s) 528
BciVI GTATCC 1 cut(s) 1007
BclI TGATCA 1 cut(s) 213
BcoDI GTCTC 2 cut(s) 230, 645
BfaI CTAG 1 cut(s) 677
BfmI CTRYAG 2 cut(s) 109, 863
BfuAI ACCTGC 2 cut(s) 754, 1125
BfuI GTATCC 1 cut(s) 1007
BglII AGATCT 2 cut(s) 764, 1363
BisI GCNGC 7 cut(s) 81, 84, 863, 866, 1236, 1346, 1464
BlsI GCNGC 7 cut(s) 82, 85, 864, 867, 1237, 1347, 1465
Bme1390I CCNGG 1 cut(s) 528
Bme18I GGWCC 1 cut(s) 1331
BmeRI GACNNNNNGTC 1 cut(s) 976
BmeT110I CYCGRG 2 cut(s) 1112, 1437
BmgBI CACGTC 2 cut(s) 187, 1172
BmgT120I GGNCC 1 cut(s) 1331
BmiI GGNNCC 2 cut(s) 1302, 1333
BmrFI CCNGG 1 cut(s) 528
BmrI ACTGGG 1 cut(s) 992
BmsI GCATC 7 cut(s) 481, 811, 1087, 1319, 1390, 1423, 1502
BmuI ACTGGG 1 cut(s) 992
BpmI CTGGAG 2 cut(s) 35, 1290
Bpu10I CCTNAGC 1 cut(s) 1119
Bsa29I ATCGAT 1 cut(s) 804
BsaJI CCNNGG 1 cut(s) 1190
BsaXI ACNNNNNCTCC 2 cut(s) 30, 60
Bse1I ACTGG 6 cut(s) 18, 453, 615, 977, 987, 1327
Bse3DI GCAATG 2 cut(s) 457, 594
BseBI CCWGG 1 cut(s) 528
BseCI ATCGAT 1 cut(s) 804
BseDI CCNNGG 1 cut(s) 1190
BseGI GGATG 5 cut(s) 496, 778, 815, 966, 1186
BseMI GCAATG 2 cut(s) 457, 594
BseMII CTCAG 2 cut(s) 131, 486
BseNI ACTGG 6 cut(s) 18, 453, 615, 977, 987, 1327
BseRI GAGGAG 2 cut(s) 32, 56
BseSI GKGCMC 1 cut(s) 1171
BseXI GCAGC 7 cut(s) 92, 95, 849, 877, 1247, 1332, 1475
BsgI GTGCAG 1 cut(s) 732
Bsh1236I CGCG 1 cut(s) 1339
BshFI GGCC 2 cut(s) 584, 714
BshVI ATCGAT 1 cut(s) 804
BsiHKAI GWGCWC 2 cut(s) 118, 1171
BsiHKCI CYCGRG 2 cut(s) 1112, 1437
BslFI GGGAC 2 cut(s) 925, 1226
BsmAI GTCTC 2 cut(s) 230, 645
BsmBI CGTCTC 1 cut(s) 230
BsmFI GGGAC 2 cut(s) 925, 1226
BsmI GAATGC 2 cut(s) 971, 1238
BsnI GGCC 2 cut(s) 584, 714
BsoBI CYCGRG 2 cut(s) 1112, 1437
Bsp1286I GDGCHC 2 cut(s) 118, 1171
Bsp1407I TGTACA 1 cut(s) 734
Bsp143I GATC 8 cut(s) 7, 213, 764, 1036, 1123, 1300, 1363, 1504
BspACI CCGC 2 cut(s) 824, 1339
BspANI GGCC 2 cut(s) 584, 714
BspCNI CTCAG 2 cut(s) 130, 487
BspDI ATCGAT 1 cut(s) 804
BspFNI CGCG 1 cut(s) 1339
BspLI GGNNCC 2 cut(s) 1302, 1333
BspMAI CTGCAG 1 cut(s) 867
BspMI ACCTGC 2 cut(s) 754, 1125
BspPI GGATC 6 cut(s) 15, 1031, 1131, 1295, 1308, 1499
BsrDI GCAATG 2 cut(s) 457, 594
BsrGI TGTACA 1 cut(s) 734
BsrI ACTGG 6 cut(s) 18, 453, 615, 977, 987, 1327
BssECI CCNNGG 1 cut(s) 1190
BssMI GATC 8 cut(s) 7, 213, 764, 1036, 1123, 1300, 1363, 1504
BssT1I CCWWGG 1 cut(s) 1190
Bst2UI CCWGG 1 cut(s) 528
Bst4CI ACNGT 3 cut(s) 689, 907, 996
BstAPI GCANNNNNTGC 1 cut(s) 449
BstAUI TGTACA 1 cut(s) 734
BstC8I GCNNGC 3 cut(s) 441, 894, 1491
BstDEI CTNAG 3 cut(s) 117, 495, 1119
BstF5I GGATG 5 cut(s) 496, 778, 815, 966, 1186
BstFNI CGCG 1 cut(s) 1339
BstKTI GATC 8 cut(s) 10, 216, 767, 1039, 1126, 1303, 1366, 1507
BstMAI GTCTC 2 cut(s) 230, 645
BstMBI GATC 8 cut(s) 7, 213, 764, 1036, 1123, 1300, 1363, 1504
BstMWI GCNNNNNNNGC 3 cut(s) 449, 871, 1345
BstNI CCWGG 1 cut(s) 528
BstNSI RCATGY 2 cut(s) 419, 1053
BstSCI CCNGG 1 cut(s) 526
BstSFI CTRYAG 2 cut(s) 109, 863
BstSLI GKGCMC 1 cut(s) 1171
BstUI CGCG 1 cut(s) 1339
BstV1I GCAGC 7 cut(s) 92, 95, 849, 877, 1247, 1332, 1475
BstX2I RGATCY 4 cut(s) 764, 1123, 1300, 1363
BstYI RGATCY 4 cut(s) 764, 1123, 1300, 1363
Bsu15I ATCGAT 1 cut(s) 804
BsuI GTATCC 1 cut(s) 1007
BsuRI GGCC 2 cut(s) 584, 714
BsuTUI ATCGAT 1 cut(s) 804
BtrI CACGTC 2 cut(s) 187, 1172
BtsCI GGATG 5 cut(s) 496, 778, 815, 966, 1186
BtsI GCAGTG 1 cut(s) 749
BtsIMutI CAGTG 2 cut(s) 749, 980
BveI ACCTGC 2 cut(s) 754, 1125
Cac8I GCNNGC 3 cut(s) 441, 894, 1491
Cfr13I GGNCC 1 cut(s) 1331
ClaI ATCGAT 1 cut(s) 804
Csp6I GTAC 4 cut(s) 200, 608, 735, 1481
CviAII CATG 7 cut(s) 247, 367, 416, 538, 694, 755, 1050
CviQI GTAC 4 cut(s) 200, 608, 735, 1481
DdeI CTNAG 3 cut(s) 117, 495, 1119
DpnI GATC 8 cut(s) 9, 215, 766, 1038, 1125, 1302, 1365, 1506
DpnII GATC 8 cut(s) 7, 213, 764, 1036, 1123, 1300, 1363, 1504
DraI TTTAAA 1 cut(s) 1083
DraIII CACNNNGTG 1 cut(s) 605
DriI GACNNNNNGTC 1 cut(s) 976
EaeI YGGCCR 1 cut(s) 582
Eam1105I GACNNNNNGTC 1 cut(s) 976
Ecl136II GAGCTC 1 cut(s) 116
Eco130I CCWWGG 1 cut(s) 1190
Eco24I GRGCYC 1 cut(s) 118
Eco32I GATATC 1 cut(s) 802
Eco47I GGWCC 1 cut(s) 1331
Eco53kI GAGCTC 1 cut(s) 116
Eco57I CTGAAG 1 cut(s) 954
Eco88I CYCGRG 2 cut(s) 1112, 1437
EcoICRI GAGCTC 1 cut(s) 116
EcoO109I RGGNCCY 1 cut(s) 1331
EcoRI GAATTC 1 cut(s) 1445
EcoRII CCWGG 1 cut(s) 526
EcoRV GATATC 1 cut(s) 802
EcoT14I CCWWGG 1 cut(s) 1190
EcoT38I GRGCYC 1 cut(s) 118
ErhI CCWWGG 1 cut(s) 1190
Esp3I CGTCTC 1 cut(s) 230
FaeI CATG 7 cut(s) 250, 370, 419, 541, 697, 758, 1053
FaqI GGGAC 2 cut(s) 925, 1226
FatI CATG 7 cut(s) 246, 366, 415, 537, 693, 754, 1049
FbaI TGATCA 1 cut(s) 213
Fnu4HI GCNGC 7 cut(s) 81, 84, 863, 866, 1236, 1346, 1464
FokI GGATG 5 cut(s) 503, 785, 822, 973, 1173
FriOI GRGCYC 1 cut(s) 118
Fsp4HI GCNGC 7 cut(s) 81, 84, 863, 866, 1236, 1346, 1464
FspBI CTAG 1 cut(s) 677
GluI GCNGC 7 cut(s) 81, 84, 863, 866, 1236, 1346, 1464
GsuI CTGGAG 2 cut(s) 35, 1290
HaeIII GGCC 2 cut(s) 584, 714
Hin1II CATG 7 cut(s) 250, 370, 419, 541, 697, 758, 1053
HincII GTYRAC 1 cut(s) 277
HindII GTYRAC 1 cut(s) 277
HindIII AAGCTT 1 cut(s) 1422
HinfI GANTC 3 cut(s) 544, 620, 1354
HphI GGTGA 3 cut(s) 332, 545, 1514
Hpy166II GTNNAC 3 cut(s) 277, 608, 1169
Hpy188I TCNGA 6 cut(s) 120, 184, 388, 630, 706, 1033
Hpy188III TCNNGA 7 cut(s) 338, 488, 677, 728, 818, 1091, 1329
Hpy8I GTNNAC 3 cut(s) 277, 608, 1169
HpyAV CCTTC 6 cut(s) 17, 23, 29, 67, 680, 943
HpyCH4III ACNGT 3 cut(s) 689, 907, 996
HpyCH4IV ACGT 2 cut(s) 186, 1171
HpyF10VI GCNNNNNNNGC 3 cut(s) 449, 871, 1345
HpyF3I CTNAG 3 cut(s) 117, 495, 1119
HpySE526I ACGT 2 cut(s) 186, 1171
Hsp92II CATG 7 cut(s) 250, 370, 419, 541, 697, 758, 1053
Ksp22I TGATCA 1 cut(s) 213
Kzo9I GATC 8 cut(s) 7, 213, 764, 1036, 1123, 1300, 1363, 1504
LmnI GCTCC 2 cut(s) 986, 1261
Lsp1109I GCAGC 7 cut(s) 92, 95, 849, 877, 1247, 1332, 1475
LweI GCATC 7 cut(s) 481, 811, 1087, 1319, 1390, 1423, 1502
MaeI CTAG 1 cut(s) 677
MaeII ACGT 2 cut(s) 186, 1171
MaeIII GTNAC 4 cut(s) 533, 689, 978, 1512
MalI GATC 8 cut(s) 9, 215, 766, 1038, 1125, 1302, 1365, 1506
MboI GATC 8 cut(s) 7, 213, 764, 1036, 1123, 1300, 1363, 1504
MboII GAAGA 4 cut(s) 136, 391, 665, 1106
MfeI CAATTG 1 cut(s) 1349
MflI RGATCY 4 cut(s) 764, 1123, 1300, 1363
MhlI GDGCHC 2 cut(s) 118, 1171
MlsI TGGCCA 1 cut(s) 584
MluCI AATT 6 cut(s) 170, 587, 781, 1085, 1349, 1445
MluNI TGGCCA 1 cut(s) 584
MlyI GAGTC 2 cut(s) 538, 1348
MmeI TCCRAC 2 cut(s) 821, 991
Mox20I TGGCCA 1 cut(s) 584
MroXI GAANNNNTTC 2 cut(s) 624, 1324
MscI TGGCCA 1 cut(s) 584
MseI TTAA 7 cut(s) 255, 468, 509, 569, 657, 944, 1082
Msp20I TGGCCA 1 cut(s) 584
MspA1I CMGCKG 1 cut(s) 862
MspR9I CCNGG 1 cut(s) 528
MunI CAATTG 1 cut(s) 1349
Mva1269I GAATGC 2 cut(s) 971, 1238
MvaI CCWGG 1 cut(s) 528
MvnI CGCG 1 cut(s) 1339
MwoI GCNNNNNNNGC 3 cut(s) 449, 871, 1345
NdeII GATC 8 cut(s) 7, 213, 764, 1036, 1123, 1300, 1363, 1504
NlaIII CATG 7 cut(s) 250, 370, 419, 541, 697, 758, 1053
NlaIV GGNNCC 2 cut(s) 1302, 1333
NmuCI GTSAC 3 cut(s) 533, 689, 978
NspI RCATGY 2 cut(s) 419, 1053
PaeR7I CTCGAG 2 cut(s) 1112, 1437
PciI ACATGT 1 cut(s) 415
PcsI WCGNNNNNNNCGW 1 cut(s) 62
PctI GAATGC 2 cut(s) 971, 1238
PdmI GAANNNNTTC 2 cut(s) 624, 1324
PfeI GAWTC 1 cut(s) 620
PkrI GCNGC 7 cut(s) 82, 85, 864, 867, 1237, 1347, 1465
PleI GAGTC 2 cut(s) 538, 1348
PpsI GAGTC 2 cut(s) 538, 1348
PpuMI RGGWCCY 1 cut(s) 1331
PscI ACATGT 1 cut(s) 415
Psp124BI GAGCTC 1 cut(s) 118
Psp5II RGGWCCY 1 cut(s) 1331
Psp6I CCWGG 1 cut(s) 526
PspGI CCWGG 1 cut(s) 526
PspN4I GGNNCC 2 cut(s) 1302, 1333
PspPI GGNCC 1 cut(s) 1331
PspPPI RGGWCCY 1 cut(s) 1331
PspXI VCTCGAGB 2 cut(s) 1112, 1437
PstI CTGCAG 1 cut(s) 867
PsuI RGATCY 4 cut(s) 764, 1123, 1300, 1363
PvuII CAGCTG 1 cut(s) 862
RsaI GTAC 4 cut(s) 201, 609, 736, 1482
RsaNI GTAC 4 cut(s) 200, 608, 735, 1481
SacI GAGCTC 1 cut(s) 118
SaqAI TTAA 7 cut(s) 255, 468, 509, 569, 657, 944, 1082
SatI GCNGC 7 cut(s) 81, 84, 863, 866, 1236, 1346, 1464
Sau3AI GATC 8 cut(s) 7, 213, 764, 1036, 1123, 1300, 1363, 1504
Sau96I GGNCC 1 cut(s) 1331
SchI GAGTC 2 cut(s) 538, 1348
ScrFI CCNGG 1 cut(s) 528
SduI GDGCHC 2 cut(s) 118, 1171
SfaNI GCATC 7 cut(s) 481, 811, 1087, 1319, 1390, 1423, 1502
SfcI CTRYAG 2 cut(s) 109, 863
Sfr274I CTCGAG 2 cut(s) 1112, 1437
SinI GGWCC 1 cut(s) 1331
SlaI CTCGAG 2 cut(s) 1112, 1437
SmlI CTYRAG 2 cut(s) 1112, 1437
SmoI CTYRAG 2 cut(s) 1112, 1437
Sse9I AATT 6 cut(s) 170, 587, 781, 1085, 1349, 1445
SsiI CCGC 2 cut(s) 824, 1339
SspMI CTAG 1 cut(s) 677
SstI GAGCTC 1 cut(s) 118
StyD4I CCNGG 1 cut(s) 526
StyI CCWWGG 1 cut(s) 1190
TaaI ACNGT 3 cut(s) 689, 907, 996
TaiI ACGT 2 cut(s) 189, 1174
TaqI TCGA 7 cut(s) 10, 56, 328, 804, 902, 1113, 1438
TasI AATT 6 cut(s) 170, 587, 781, 1085, 1349, 1445
TatI WGTACW 2 cut(s) 607, 734
TfiI GAWTC 1 cut(s) 620
Tru1I TTAA 7 cut(s) 255, 468, 509, 569, 657, 944, 1082
Tru9I TTAA 7 cut(s) 255, 468, 509, 569, 657, 944, 1082
TscAI CASTG 2 cut(s) 756, 987
TseFI GTSAC 3 cut(s) 533, 689, 978
TseI GCWGC 7 cut(s) 80, 83, 862, 865, 1235, 1345, 1463
Tsp45I GTSAC 3 cut(s) 533, 689, 978
TspGWI ACGGA 1 cut(s) 254
TspRI CASTG 2 cut(s) 756, 987
VneI GTGCAC 1 cut(s) 1167
VpaK11BI GGWCC 1 cut(s) 1331
XapI RAATTY 4 cut(s) 587, 781, 1085, 1445
XbaI TCTAGA 1 cut(s) 676
XceI RCATGY 2 cut(s) 419, 1053
XhoI CTCGAG 2 cut(s) 1112, 1437
XmnI GAANNNNTTC 2 cut(s) 624, 1324
XspI CTAG 1 cut(s) 677
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.