MD15G1055000.v1.1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
3727362 .. 3732241
4880 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1055000.v1.1.491

Sequence Viewer

Length: 1518 bp
ATGGAGGATCGGGAGGAGCAGGAGGAGGAGGAGGAGGAGGTGCTGGGGTCGAGCTTGACGATGGAGAAGGTGGCGGCGGCCAAGCAGTTCATAGAGAACCACTACAGAGCTCAGATGAAGAACATTCAGGAACGGAAGGAGAGACGCTGGGTGTTGGAAAGGAAATTAGCTTCGTCAGATGTGCCAAAGGAGGTACAAATCAACCTGATCAAAGACTTAGAGCAAAAAGAGACAGAATTTATGCGACTTAAAAGGCACAAGATATGTGTTGATGATTTTGAGCCTTTGACCATCATTGGTAGGGGGGCCTTTGGTGAGGTCCGATTGTGTCGGGAGAAAAAATCTGGCAATATCTACGCCATGAAAAAGTTGAAGAAATCTGAAATGCTTAAGAGAGGACAGGTGGAACATGTTAGAGCTGAAAGAAACTTGCTGGCAGAAGTTGCCAGCCATTGCATAGTTAAACTATACTACTCCTTCCAAGATGCAGAGTACTTATACTTAATCATGGAATATCTGCCTGGGGGTGACATGATGACTCTGCTGATTAGGGAAGACACCTTAACTGAAAGTGTGGCAAAATTTTACATTGCACAGAGCGTACTGGCCATAGAATCTATTCAGAAACACAACTACATACACAGAGACATTAAGCCAGACAACCTGCTTCTGGATAAAAATGGTCACATGAAACTCTCAGATTTTGGCCTCTGTAAGCCTCTTGACTGTACAACTTTACCTGCACTGCATGAAAATAGAACTATGGATGACGAAAATATGACAGAACCAATGGATATCGACACATGCGTTCCTGATGCGGATAATCGGAGTAGTTGGAAAAGCCCTGCTGAACAGCTGCAACATTGGCAGATGAACAGGAGAAAGTTGGCATTTTCAACTGTGGGGACACCCGACTACATTGCACCTGAAGTGTTATTGAAGAAAGGATATGGGATGGAATGCGACTGGTGGTCATTGGGAGCAATAATGTACGAAATGCTTGTTGGTTACCCTCCATTTTATTCAGATGATCCAATAACTACATGCAGAAAGATTGTTCATTGGAGAAACCACTTAAAGTTTCCAGAAGACGCAAGGTTGACAGCTGAGGCTAAGGATCTTATTTGCAGGTTGCTGTGTGATGTTGAACATAGGCTAGGTACTGGTGGGGCACTTCAAATCAAATCTCATCCTTGGTTCAAGGACGTTGTGTGGGACAAACTCTATGAAATGGACGCAGCATTCAAACCAGAAGTGAATGGGGAGCTTGATACCCAGAACTTTATGAAGTTTGATGAGTTGGACCCACCAGCGTCTACAAGAACTGGATCTTCACGAAAGTTACAAATGACTCCCAAAGATTTAAGCTTTGTTGGCTACACATACAAGAACTTTGATGCTGTGAAGGGGCTTCGCCAAGCTCTTGGTGATGCTAGAGTAGATTTTACTGCTGAAAGGGCAGCCAAGGAAGCCGAGTTACAGATGCTTGCATCAGCCGGTGATCCCATGTTACCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

506

Amino Acids

58.33

Weight (kDa)

5.62

Isoelectric Point (pI)

36.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 94 - 242 1.5e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 98 - 241 1.9e-22 Protein tyrosine and serine/threonine kinase
ABC1 PF03109 167 - 243 1.9e-06 ABC1 atypical kinase-like domain
Pkinase PF00069 291 - 400 1.6e-20 Protein kinase domain
Pkinase_C PF00433 419 - 462 4.2e-06 Protein kinase C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010799)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 672, 748, 1119
AccI GTMKAC 1 cut(s) 1316
AciI CCGC 3 cut(s) 74, 77, 818
AclWI GGATC 5 cut(s) 15, 1025, 1125, 1336, 1496
AcoI YGGCCR 2 cut(s) 78, 606
AcsI RAATTY 2 cut(s) 236, 581
AcuI CTGAAG 1 cut(s) 948
AfaI GTAC 6 cut(s) 195, 494, 603, 730, 992, 1162
AfiI CCNNNNNNNGG 1 cut(s) 670
AflII CTTAAG 1 cut(s) 389
AflIII ACRYGT 1 cut(s) 409
AgsI TTSAA 7 cut(s) 373, 897, 940, 1148, 1178, 1201, 1246
AhdI GACNNNNNGTC 1 cut(s) 970
AjnI CCWGG 1 cut(s) 520
AjuI GAANNNNNNNTTGG 2 cut(s) 987, 1019
AluBI AGCT 9 cut(s) 54, 110, 170, 419, 856, 1106, 1267, 1368, 1421
AluI AGCT 9 cut(s) 54, 110, 170, 419, 856, 1106, 1267, 1368, 1421
Alw21I GWGCWC 1 cut(s) 112
Alw26I GTCTC 3 cut(s) 136, 224, 639
AlwI GGATC 5 cut(s) 15, 1025, 1125, 1336, 1496
AoxI GGCC 4 cut(s) 78, 306, 606, 706
ApeKI GCWGC 3 cut(s) 856, 1238, 1460
ApoI RAATTY 2 cut(s) 236, 581
Asp700I GAANNNNTTC 1 cut(s) 618
AspS9I GGNCC 3 cut(s) 306, 319, 1303
AsuHPI GGTGA 4 cut(s) 326, 539, 1439, 1511
AvaII GGWCC 2 cut(s) 319, 1303
BaeGI GKGCMC 1 cut(s) 1174
BalI TGGCCA 1 cut(s) 608
BanII GRGCYC 1 cut(s) 112
BarI GAAGNNNNNNTAC 2 cut(s) 1461, 1493
BbsI GAAGAC 2 cut(s) 561, 1095
Bbv12I GWGCWC 1 cut(s) 112
BbvCI CCTCAGC 1 cut(s) 1107
BbvI GCAGC 3 cut(s) 843, 1250, 1472
BccI CCATC 3 cut(s) 55, 299, 949
BcgI CGANNNNNNTGC 2 cut(s) 902, 936
BciT130I CCWGG 1 cut(s) 522
BclI TGATCA 1 cut(s) 207
BcoDI GTCTC 3 cut(s) 136, 224, 639
BfaI CTAG 2 cut(s) 1157, 1434
BfmI CTRYAG 1 cut(s) 103
BfrI CTTAAG 1 cut(s) 389
BfuAI ACCTGC 3 cut(s) 672, 748, 1119
BisI GCNGC 5 cut(s) 75, 78, 857, 1239, 1461
BlsI GCNGC 5 cut(s) 76, 79, 858, 1240, 1462
BmcAI AGTACT 1 cut(s) 494
Bme1390I CCNGG 1 cut(s) 522
Bme18I GGWCC 2 cut(s) 319, 1303
BmeRI GACNNNNNGTC 1 cut(s) 970
BmgT120I GGNCC 3 cut(s) 306, 319, 1303
BmiI GGNNCC 2 cut(s) 307, 1305
BmrFI CCNGG 1 cut(s) 522
BmsI GCATC 6 cut(s) 475, 805, 1387, 1420, 1473, 1499
BpiI GAAGAC 2 cut(s) 561, 1095
Bpu10I CCTNAGC 2 cut(s) 1107, 1113
BsaJI CCNNGG 3 cut(s) 521, 1193, 1464
Bsc4I CCNNNNNNNGG 1 cut(s) 670
Bse118I RCCGGY 1 cut(s) 1496
Bse1I ACTGG 4 cut(s) 609, 971, 1168, 1330
Bse3DI GCAATG 3 cut(s) 451, 588, 918
BseBI CCWGG 1 cut(s) 522
BseDI CCNNGG 3 cut(s) 521, 1193, 1464
BseGI GGATG 3 cut(s) 772, 960, 1189
BseLI CCNNNNNNNGG 1 cut(s) 670
BseMI GCAATG 3 cut(s) 451, 588, 918
BseMII CTCAG 3 cut(s) 125, 711, 1098
BseNI ACTGG 4 cut(s) 609, 971, 1168, 1330
BseRI GAGGAG 6 cut(s) 29, 38, 41, 44, 47, 50
BseSI GKGCMC 1 cut(s) 1174
BseXI GCAGC 3 cut(s) 843, 1250, 1472
BseYI CCCAGC 2 cut(s) 43, 147
BsgI GTGCAG 1 cut(s) 726
BshFI GGCC 4 cut(s) 80, 308, 608, 708
BsiHKAI GWGCWC 1 cut(s) 112
BsiSI CCGG 1 cut(s) 1497
BslFI GGGAC 2 cut(s) 919, 1229
BslI CCNNNNNNNGG 1 cut(s) 670
BsmAI GTCTC 3 cut(s) 136, 224, 639
BsmBI CGTCTC 1 cut(s) 136
BsmFI GGGAC 2 cut(s) 919, 1229
BsmI GAATGC 2 cut(s) 965, 1241
BsnI GGCC 4 cut(s) 80, 308, 608, 708
Bsp1286I GDGCHC 2 cut(s) 112, 1174
Bsp1407I TGTACA 1 cut(s) 728
Bsp143I GATC 6 cut(s) 7, 207, 1030, 1117, 1328, 1501
BspACI CCGC 3 cut(s) 74, 77, 818
BspANI GGCC 4 cut(s) 80, 308, 608, 708
BspCNI CTCAG 3 cut(s) 124, 710, 1099
BspLI GGNNCC 2 cut(s) 307, 1305
BspMI ACCTGC 3 cut(s) 672, 748, 1119
BspPI GGATC 5 cut(s) 15, 1025, 1125, 1336, 1496
BspTI CTTAAG 1 cut(s) 389
BsrDI GCAATG 3 cut(s) 451, 588, 918
BsrFI RCCGGY 1 cut(s) 1496
BsrGI TGTACA 1 cut(s) 728
BsrI ACTGG 4 cut(s) 609, 971, 1168, 1330
BssAI RCCGGY 1 cut(s) 1496
BssECI CCNNGG 3 cut(s) 521, 1193, 1464
BssMI GATC 6 cut(s) 7, 207, 1030, 1117, 1328, 1501
BssT1I CCWWGG 2 cut(s) 1193, 1464
Bst2UI CCWGG 1 cut(s) 522
Bst4CI ACNGT 2 cut(s) 728, 901
BstAFI CTTAAG 1 cut(s) 389
BstAPI GCANNNNNTGC 1 cut(s) 443
BstAUI TGTACA 1 cut(s) 728
BstC8I GCNNGC 3 cut(s) 435, 448, 1488
BstDEI CTNAG 5 cut(s) 111, 217, 697, 1107, 1113
BstEII GGTNACC 1 cut(s) 1007
BstF5I GGATG 3 cut(s) 772, 960, 1189
BstKTI GATC 6 cut(s) 10, 210, 1033, 1120, 1331, 1504
BstMAI GTCTC 3 cut(s) 136, 224, 639
BstMBI GATC 6 cut(s) 7, 207, 1030, 1117, 1328, 1501
BstMWI GCNNNNNNNGC 5 cut(s) 443, 865, 1374, 1457, 1469
BstNI CCWGG 1 cut(s) 522
BstNSI RCATGY 3 cut(s) 413, 807, 1047
BstPI GGTNACC 1 cut(s) 1007
BstSCI CCNGG 1 cut(s) 520
BstSFI CTRYAG 1 cut(s) 103
BstSLI GKGCMC 1 cut(s) 1174
BstV1I GCAGC 3 cut(s) 843, 1250, 1472
BstV2I GAAGAC 2 cut(s) 561, 1095
BstX2I RGATCY 2 cut(s) 1117, 1328
BstXI CCANNNNNNTGG 1 cut(s) 1424
BstYI RGATCY 2 cut(s) 1117, 1328
BsuRI GGCC 4 cut(s) 80, 308, 608, 708
BtsCI GGATG 3 cut(s) 772, 960, 1189
BtsI GCAGTG 1 cut(s) 743
BtsIMutI CAGTG 1 cut(s) 743
BveI ACCTGC 3 cut(s) 672, 748, 1119
Cac8I GCNNGC 3 cut(s) 435, 448, 1488
Cfr10I RCCGGY 1 cut(s) 1496
Cfr13I GGNCC 3 cut(s) 306, 319, 1303
CseI GACGC 4 cut(s) 153, 1100, 1244, 1302
Csp6I GTAC 6 cut(s) 194, 493, 602, 729, 991, 1161
CviAII CATG 9 cut(s) 361, 410, 508, 532, 688, 749, 804, 1044, 1507
CviQI GTAC 6 cut(s) 194, 493, 602, 729, 991, 1161
DdeI CTNAG 5 cut(s) 111, 217, 697, 1107, 1113
DpnI GATC 6 cut(s) 9, 209, 1032, 1119, 1330, 1503
DpnII GATC 6 cut(s) 7, 207, 1030, 1117, 1328, 1501
DriI GACNNNNNGTC 1 cut(s) 970
EaeI YGGCCR 2 cut(s) 78, 606
Eam1105I GACNNNNNGTC 1 cut(s) 970
Ecl136II GAGCTC 1 cut(s) 110
Eco130I CCWWGG 2 cut(s) 1193, 1464
Eco24I GRGCYC 1 cut(s) 112
Eco32I GATATC 1 cut(s) 796
Eco47I GGWCC 2 cut(s) 319, 1303
Eco53kI GAGCTC 1 cut(s) 110
Eco57I CTGAAG 1 cut(s) 948
Eco91I GGTNACC 1 cut(s) 1007
EcoICRI GAGCTC 1 cut(s) 110
EcoO109I RGGNCCY 1 cut(s) 306
EcoO65I GGTNACC 1 cut(s) 1007
EcoRII CCWGG 1 cut(s) 520
EcoRV GATATC 1 cut(s) 796
EcoT14I CCWWGG 2 cut(s) 1193, 1464
EcoT38I GRGCYC 1 cut(s) 112
ErhI CCWWGG 2 cut(s) 1193, 1464
Esp3I CGTCTC 1 cut(s) 136
FaeI CATG 9 cut(s) 364, 413, 511, 535, 691, 752, 807, 1047, 1510
FaqI GGGAC 2 cut(s) 919, 1229
FatI CATG 9 cut(s) 360, 409, 507, 531, 687, 748, 803, 1043, 1506
FbaI TGATCA 1 cut(s) 207
FblI GTMKAC 1 cut(s) 1316
Fnu4HI GCNGC 5 cut(s) 75, 78, 857, 1239, 1461
FokI GGATG 3 cut(s) 779, 967, 1176
FriOI GRGCYC 1 cut(s) 112
Fsp4HI GCNGC 5 cut(s) 75, 78, 857, 1239, 1461
FspBI CTAG 2 cut(s) 1157, 1434
GluI GCNGC 5 cut(s) 75, 78, 857, 1239, 1461
GsaI CCCAGC 2 cut(s) 47, 151
HaeIII GGCC 4 cut(s) 80, 308, 608, 708
HapII CCGG 1 cut(s) 1497
HgaI GACGC 4 cut(s) 153, 1100, 1244, 1302
Hin1II CATG 9 cut(s) 364, 413, 511, 535, 691, 752, 807, 1047, 1510
HincII GTYRAC 1 cut(s) 1101
HindII GTYRAC 1 cut(s) 1101
HindIII AAGCTT 1 cut(s) 1366
HinfI GANTC 3 cut(s) 538, 614, 1351
HpaII CCGG 1 cut(s) 1497
HphI GGTGA 4 cut(s) 326, 539, 1439, 1511
Hpy166II GTNNAC 2 cut(s) 1101, 1317
Hpy188I TCNGA 8 cut(s) 114, 178, 323, 382, 624, 700, 828, 1027
Hpy188III TCNNGA 8 cut(s) 11, 128, 332, 671, 722, 812, 1085, 1335
Hpy8I GTNNAC 2 cut(s) 1101, 1317
HpyAV CCTTC 4 cut(s) 61, 130, 487, 1399
HpyCH4III ACNGT 2 cut(s) 728, 901
HpyCH4IV ACGT 1 cut(s) 1206
HpyF10VI GCNNNNNNNGC 5 cut(s) 443, 865, 1374, 1457, 1469
HpyF3I CTNAG 5 cut(s) 111, 217, 697, 1107, 1113
HpySE526I ACGT 1 cut(s) 1206
Hsp92II CATG 9 cut(s) 364, 413, 511, 535, 691, 752, 807, 1047, 1510
Ksp22I TGATCA 1 cut(s) 207
Kzo9I GATC 6 cut(s) 7, 207, 1030, 1117, 1328, 1501
LmnI GCTCC 3 cut(s) 16, 980, 1264
Lsp1109I GCAGC 3 cut(s) 843, 1250, 1472
LweI GCATC 6 cut(s) 475, 805, 1387, 1420, 1473, 1499
MaeI CTAG 2 cut(s) 1157, 1434
MaeII ACGT 1 cut(s) 1206
MaeIII GTNAC 6 cut(s) 527, 683, 1007, 1341, 1476, 1509
MalI GATC 6 cut(s) 9, 209, 1032, 1119, 1330, 1503
MboI GATC 6 cut(s) 7, 207, 1030, 1117, 1328, 1501
MboII GAAGA 6 cut(s) 130, 385, 566, 952, 1100, 1323
MflI RGATCY 2 cut(s) 1117, 1328
MhlI GDGCHC 2 cut(s) 112, 1174
MlsI TGGCCA 1 cut(s) 608
MluCI AATT 3 cut(s) 164, 236, 581
MluNI TGGCCA 1 cut(s) 608
MlyI GAGTC 2 cut(s) 532, 1345
MmeI TCCRAC 3 cut(s) 135, 815, 1281
Mox20I TGGCCA 1 cut(s) 608
MroXI GAANNNNTTC 1 cut(s) 618
MscI TGGCCA 1 cut(s) 608
MseI TTAA 8 cut(s) 249, 390, 462, 503, 563, 651, 1076, 1364
Msp20I TGGCCA 1 cut(s) 608
MspA1I CMGCKG 2 cut(s) 856, 1106
MspCI CTTAAG 1 cut(s) 389
MspI CCGG 1 cut(s) 1497
MspR9I CCNGG 1 cut(s) 522
Mva1269I GAATGC 2 cut(s) 965, 1241
MvaI CCWGG 1 cut(s) 522
MwoI GCNNNNNNNGC 5 cut(s) 443, 865, 1374, 1457, 1469
NdeII GATC 6 cut(s) 7, 207, 1030, 1117, 1328, 1501
NlaIII CATG 9 cut(s) 364, 413, 511, 535, 691, 752, 807, 1047, 1510
NlaIV GGNNCC 2 cut(s) 307, 1305
NmeAIII GCCGAG 1 cut(s) 1498
NmuCI GTSAC 2 cut(s) 527, 683
NspI RCATGY 3 cut(s) 413, 807, 1047
PciI ACATGT 1 cut(s) 409
PcsI WCGNNNNNNNCGW 2 cut(s) 56, 804
PctI GAATGC 2 cut(s) 965, 1241
PdmI GAANNNNTTC 1 cut(s) 618
PfeI GAWTC 1 cut(s) 614
PkrI GCNGC 5 cut(s) 76, 79, 858, 1240, 1462
PleI GAGTC 2 cut(s) 532, 1345
PpsI GAGTC 2 cut(s) 532, 1345
PscI ACATGT 1 cut(s) 409
Psp124BI GAGCTC 1 cut(s) 112
Psp6I CCWGG 1 cut(s) 520
PspEI GGTNACC 1 cut(s) 1007
PspFI CCCAGC 2 cut(s) 43, 147
PspGI CCWGG 1 cut(s) 520
PspN4I GGNNCC 2 cut(s) 307, 1305
PspPI GGNCC 3 cut(s) 306, 319, 1303
PsuI RGATCY 2 cut(s) 1117, 1328
PvuII CAGCTG 2 cut(s) 856, 1106
RsaI GTAC 6 cut(s) 195, 494, 603, 730, 992, 1162
RsaNI GTAC 6 cut(s) 194, 493, 602, 729, 991, 1161
SacI GAGCTC 1 cut(s) 112
SaqAI TTAA 8 cut(s) 249, 390, 462, 503, 563, 651, 1076, 1364
SatI GCNGC 5 cut(s) 75, 78, 857, 1239, 1461
Sau3AI GATC 6 cut(s) 7, 207, 1030, 1117, 1328, 1501
Sau96I GGNCC 3 cut(s) 306, 319, 1303
ScaI AGTACT 1 cut(s) 494
SchI GAGTC 2 cut(s) 532, 1345
ScrFI CCNGG 1 cut(s) 522
SduI GDGCHC 2 cut(s) 112, 1174
SfaNI GCATC 6 cut(s) 475, 805, 1387, 1420, 1473, 1499
SfcI CTRYAG 1 cut(s) 103
SinI GGWCC 2 cut(s) 319, 1303
SmlI CTYRAG 1 cut(s) 389
SmoI CTYRAG 1 cut(s) 389
Sse9I AATT 3 cut(s) 164, 236, 581
SsiI CCGC 3 cut(s) 74, 77, 818
SspMI CTAG 2 cut(s) 1157, 1434
SstI GAGCTC 1 cut(s) 112
StyD4I CCNGG 1 cut(s) 520
StyI CCWWGG 2 cut(s) 1193, 1464
TaaI ACNGT 2 cut(s) 728, 901
TaiI ACGT 1 cut(s) 1209
TaqI TCGA 2 cut(s) 50, 798
TasI AATT 3 cut(s) 164, 236, 581
TatI WGTACW 2 cut(s) 492, 728
TauI GCSGC 2 cut(s) 77, 80
TfiI GAWTC 1 cut(s) 614
Tru1I TTAA 8 cut(s) 249, 390, 462, 503, 563, 651, 1076, 1364
Tru9I TTAA 8 cut(s) 249, 390, 462, 503, 563, 651, 1076, 1364
TscAI CASTG 1 cut(s) 750
TseFI GTSAC 2 cut(s) 527, 683
TseI GCWGC 3 cut(s) 856, 1238, 1460
Tsp45I GTSAC 2 cut(s) 527, 683
TspDTI ATGAA 9 cut(s) 79, 131, 377, 704, 765, 887, 1049, 1242, 1301
TspGWI ACGGA 1 cut(s) 148
TspRI CASTG 1 cut(s) 750
Vha464I CTTAAG 1 cut(s) 389
VpaK11BI GGWCC 2 cut(s) 319, 1303
XapI RAATTY 2 cut(s) 236, 581
XceI RCATGY 3 cut(s) 413, 807, 1047
XmiI GTMKAC 1 cut(s) 1316
XmnI GAANNNNTTC 1 cut(s) 618
XspI CTAG 2 cut(s) 1157, 1434
ZrmI AGTACT 1 cut(s) 494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.