pycom15g05190

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0010799
Physical Location & Seq
Reverse (-)
3101600 .. 3105742
4143 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g05190.9

Sequence Viewer

Length: 1515 bp
ATGGAGGATCGGGAGGAGCAGGAGGAGGAAGAGGAGGTGCTGGGGTCGAGCTTGACGATGGAGAAGGTGGCGGCGGCCAAGCAGTTCATAGAGAACCACTACAGAGCTCAGATGAAGAACATTCAGGAGCGGAAGGAAAGACGCTGGGTGTTGGAAAGGAAATTAGCTTCGTCAGATGTGCCAAAGGAGGTACAAATCAACCTGATCAAAGACTTAGAGCGAAAAGAGACAGAATTTATGCGACTTAAAAGACACAAGATATGCGTTGATGATTTTGAGCCTTTGACCATCATTGGTAGGGGGGCCTTTAGTGAGGTCCGATTGTGTCGGGAGAAAAAATCTGGCAATATCTACGCCATGAAAAAGTTGAAGAAATCTGAAATGCTTAAGAGAGGACAGGTGGAACATGTTAGAGCTGAAAGAAACTTGCTGGCAGAAGTTGCCAGCCATTGCATAGTTAAACTATACTACTCCTTCCAAGATGCAGAGTACTTATACTTAATCATGGAATATCTGCCTGGGGGTGACATGATGACTCTGCTGATTAGGGAAGACACCTTAACTGAAAGTATGGCTAAATTTTACATTGCACAGAGCGTACTGGCCATAGAATCTATTCAGAAACACAACTACATACACAGAGACATTAAGCCAGACAACCTGCTTCTGGACAAAAATGGTCACATGAAACTCTCAGATTTTGGCCTCTGTAAGCCTCTTGACTGTACAACTTTACCTGCACTGCATGAAAATAGAACTATGGATGATGAAAATATGACAGAACCAATGGACATCGACACATGCGTTCCTGATGCGGATAATCAGAGTAGTTGGAAAAGCCCTGCTGAACAGCTGCAACATTGGCAGATGAACAGGAGAAAGTTGGCATTTTCAACTGTGGGGACACCCGACTACATTGCACCTGAAGTGTTATTGAAGAAAGGATATGGGATGGAATGCGACTGGTGGTCATTGGGAGCAATAATGTACGAAATGCTTGTTGGTTACCCTCCATTTTATTCAGATGATCCAATAACTACATGCAGAAAGATTGTTCATTGGAGAAACCACTTAAAGTTTCCAGAAGACGCAAGGTTGACAGCTGAGGCTAAGGATCTTATTTGCAGGTTGCTGTGTGATGTTGAACATAGGCTAGGTACTGGCGGGGCACATCAAATCAAATCTCATCCTTGGTTCAAGGACGTTGTGTGGGACAAACTCTATGAAATGGACGCAGCATTCAAACCAGAAGTGAATGGGGAGCTTGATACCCAGAACTTTATGAAGTTTGATGAGTTGGACCCACCAGCGTCAGCAAGAACTGGATCTTCGCGAAAGTTACAAATGACTCCCAAAGATTTAAGCTTCGTTGGCTACACATACAAGAACTTTGATGCTGTGAAAGGGCTTCGCCAAGCTCTTGGTGAAGCTAGAGTAGATTTTACTGCTGAAAGGGCAGCCAAGGAAGCTGAGTTACAGATGCTTGCATCAGCTGGTGATCCCATGTTACCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_C

Protein Analysis

505

Amino Acids

58.27

Weight (kDa)

5.73

Isoelectric Point (pI)

35.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010799)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G33080 AT4G33080
fragaria_vesca FvH4_2g31460 FvH4_2g31460
malus_domestica MD08G1066200.v1.1 MD15G1055000.v1.1
prunus_persica Prupe.1G408200_v2.0.a1
pyrus_communis pycom08g05490 pycom15g05190
rosa_chinensis RchiOBHm_Chr6g0311341
rosa_laevigata RLG00000010415
rosa_multiflora Rmu_sc0008536.1_g000007
rosa_roxburghii Rroxscaffold_7G00157700
rosa_rugosa Rorug06G0387700 Rorug06G0387700
rosa_samantha Rh6AG502400 Rh6BG513000 Rh6CG518800 Rh6DG505000
rosa_wichuraiana Rw6G043750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 669, 745, 1116
AccBSI CCGCTC 1 cut(s) 130
AccII CGCG 1 cut(s) 1333
AciI CCGC 5 cut(s) 71, 74, 130, 815, 1164
AclWI GGATC 5 cut(s) 15, 1022, 1122, 1333, 1493
AcoI YGGCCR 2 cut(s) 75, 603
AcsI RAATTY 2 cut(s) 233, 578
AcuI CTGAAG 1 cut(s) 945
AfaI GTAC 6 cut(s) 192, 491, 600, 727, 989, 1159
AfiI CCNNNNNNNGG 1 cut(s) 667
AflII CTTAAG 1 cut(s) 386
AflIII ACRYGT 1 cut(s) 406
AgsI TTSAA 6 cut(s) 370, 894, 937, 1145, 1198, 1243
AhdI GACNNNNNGTC 1 cut(s) 967
AjnI CCWGG 1 cut(s) 517
AjuI GAANNNNNNNTTGG 2 cut(s) 984, 1016
Alw21I GWGCWC 1 cut(s) 109
Alw26I GTCTC 2 cut(s) 221, 636
AlwI GGATC 5 cut(s) 15, 1022, 1122, 1333, 1493
AoxI GGCC 4 cut(s) 75, 303, 603, 703
ApeKI GCWGC 3 cut(s) 853, 1235, 1457
ApoI RAATTY 2 cut(s) 233, 578
Asp700I GAANNNNTTC 1 cut(s) 615
AspS9I GGNCC 3 cut(s) 303, 316, 1300
AsuHPI GGTGA 3 cut(s) 536, 1436, 1508
AvaII GGWCC 2 cut(s) 316, 1300
BaeGI GKGCMC 1 cut(s) 1171
BalI TGGCCA 1 cut(s) 605
BanII GRGCYC 1 cut(s) 109
BarI GAAGNNNNNNTAC 2 cut(s) 1458, 1490
BbsI GAAGAC 2 cut(s) 558, 1092
Bbv12I GWGCWC 1 cut(s) 109
BbvCI CCTCAGC 1 cut(s) 1104
BbvI GCAGC 3 cut(s) 840, 1247, 1469
BccI CCATC 3 cut(s) 52, 296, 946
BcgI CGANNNNNNTGC 2 cut(s) 899, 933
BciT130I CCWGG 1 cut(s) 519
BclI TGATCA 1 cut(s) 204
BcoDI GTCTC 2 cut(s) 221, 636
BfaI CTAG 2 cut(s) 1154, 1431
BfmI CTRYAG 1 cut(s) 100
BfrI CTTAAG 1 cut(s) 386
BfuAI ACCTGC 3 cut(s) 669, 745, 1116
BisI GCNGC 5 cut(s) 72, 75, 854, 1236, 1458
BlsI GCNGC 5 cut(s) 73, 76, 855, 1237, 1459
BmcAI AGTACT 1 cut(s) 491
Bme1390I CCNGG 1 cut(s) 519
Bme18I GGWCC 2 cut(s) 316, 1300
BmeRI GACNNNNNGTC 1 cut(s) 967
BmgT120I GGNCC 3 cut(s) 303, 316, 1300
BmiI GGNNCC 2 cut(s) 304, 1302
BmrFI CCNGG 1 cut(s) 519
BmsI GCATC 5 cut(s) 472, 802, 1384, 1470, 1496
BpiI GAAGAC 2 cut(s) 558, 1092
Bpu10I CCTNAGC 2 cut(s) 1104, 1110
BsaJI CCNNGG 3 cut(s) 518, 1190, 1461
Bsc4I CCNNNNNNNGG 1 cut(s) 667
Bse1I ACTGG 4 cut(s) 606, 968, 1165, 1327
Bse3DI GCAATG 3 cut(s) 448, 585, 915
BseBI CCWGG 1 cut(s) 519
BseDI CCNNGG 3 cut(s) 518, 1190, 1461
BseGI GGATG 3 cut(s) 769, 957, 1186
BseLI CCNNNNNNNGG 1 cut(s) 667
BseMI GCAATG 3 cut(s) 448, 585, 915
BseMII CTCAG 4 cut(s) 122, 708, 1095, 1461
BseNI ACTGG 4 cut(s) 606, 968, 1165, 1327
BseRI GAGGAG 3 cut(s) 29, 38, 47
BseSI GKGCMC 1 cut(s) 1171
BseXI GCAGC 3 cut(s) 840, 1247, 1469
BseYI CCCAGC 2 cut(s) 40, 144
BsgI GTGCAG 1 cut(s) 723
Bsh1236I CGCG 1 cut(s) 1333
BshFI GGCC 4 cut(s) 77, 305, 605, 705
BsiHKAI GWGCWC 1 cut(s) 109
BslFI GGGAC 2 cut(s) 916, 1226
BslI CCNNNNNNNGG 1 cut(s) 667
BsmAI GTCTC 2 cut(s) 221, 636
BsmFI GGGAC 2 cut(s) 916, 1226
BsmI GAATGC 2 cut(s) 962, 1238
BsnI GGCC 4 cut(s) 77, 305, 605, 705
Bsp1286I GDGCHC 2 cut(s) 109, 1171
Bsp1407I TGTACA 1 cut(s) 725
Bsp143I GATC 6 cut(s) 7, 204, 1027, 1114, 1325, 1498
Bsp68I TCGCGA 1 cut(s) 1333
BspACI CCGC 5 cut(s) 71, 74, 130, 815, 1164
BspANI GGCC 4 cut(s) 77, 305, 605, 705
BspCNI CTCAG 4 cut(s) 121, 707, 1096, 1462
BspFNI CGCG 1 cut(s) 1333
BspLI GGNNCC 2 cut(s) 304, 1302
BspMI ACCTGC 3 cut(s) 669, 745, 1116
BspPI GGATC 5 cut(s) 15, 1022, 1122, 1333, 1493
BspTI CTTAAG 1 cut(s) 386
BsrBI CCGCTC 1 cut(s) 130
BsrDI GCAATG 3 cut(s) 448, 585, 915
BsrGI TGTACA 1 cut(s) 725
BsrI ACTGG 4 cut(s) 606, 968, 1165, 1327
BssECI CCNNGG 3 cut(s) 518, 1190, 1461
BssMI GATC 6 cut(s) 7, 204, 1027, 1114, 1325, 1498
BssT1I CCWWGG 2 cut(s) 1190, 1461
Bst2UI CCWGG 1 cut(s) 519
Bst4CI ACNGT 2 cut(s) 725, 898
Bst6I CTCTTC 1 cut(s) 24
BstAFI CTTAAG 1 cut(s) 386
BstAPI GCANNNNNTGC 1 cut(s) 440
BstAUI TGTACA 1 cut(s) 725
BstC8I GCNNGC 3 cut(s) 432, 445, 1485
BstDEI CTNAG 6 cut(s) 108, 214, 694, 1104, 1110, 1470
BstEII GGTNACC 1 cut(s) 1004
BstF5I GGATG 3 cut(s) 769, 957, 1186
BstFNI CGCG 1 cut(s) 1333
BstKTI GATC 6 cut(s) 10, 207, 1030, 1117, 1328, 1501
BstMAI GTCTC 2 cut(s) 221, 636
BstMBI GATC 6 cut(s) 7, 204, 1027, 1114, 1325, 1498
BstMWI GCNNNNNNNGC 5 cut(s) 440, 862, 1371, 1454, 1466
BstNI CCWGG 1 cut(s) 519
BstNSI RCATGY 3 cut(s) 410, 804, 1044
BstPI GGTNACC 1 cut(s) 1004
BstSCI CCNGG 1 cut(s) 517
BstSFI CTRYAG 1 cut(s) 100
BstSLI GKGCMC 1 cut(s) 1171
BstUI CGCG 1 cut(s) 1333
BstV1I GCAGC 3 cut(s) 840, 1247, 1469
BstV2I GAAGAC 2 cut(s) 558, 1092
BstX2I RGATCY 2 cut(s) 1114, 1325
BstXI CCANNNNNNTGG 1 cut(s) 1421
BstYI RGATCY 2 cut(s) 1114, 1325
BsuRI GGCC 4 cut(s) 77, 305, 605, 705
BtsCI GGATG 3 cut(s) 769, 957, 1186
BtsI GCAGTG 1 cut(s) 740
BtsIMutI CAGTG 1 cut(s) 740
BtuMI TCGCGA 1 cut(s) 1333
BveI ACCTGC 3 cut(s) 669, 745, 1116
Cac8I GCNNGC 3 cut(s) 432, 445, 1485
Cfr13I GGNCC 3 cut(s) 303, 316, 1300
CseI GACGC 4 cut(s) 150, 1097, 1241, 1299
Csp6I GTAC 6 cut(s) 191, 490, 599, 726, 988, 1158
CviAII CATG 9 cut(s) 358, 407, 505, 529, 685, 746, 801, 1041, 1504
CviQI GTAC 6 cut(s) 191, 490, 599, 726, 988, 1158
DdeI CTNAG 6 cut(s) 108, 214, 694, 1104, 1110, 1470
DpnI GATC 6 cut(s) 9, 206, 1029, 1116, 1327, 1500
DpnII GATC 6 cut(s) 7, 204, 1027, 1114, 1325, 1498
DriI GACNNNNNGTC 1 cut(s) 967
EaeI YGGCCR 2 cut(s) 75, 603
Eam1104I CTCTTC 1 cut(s) 24
Eam1105I GACNNNNNGTC 1 cut(s) 967
EarI CTCTTC 1 cut(s) 24
Ecl136II GAGCTC 1 cut(s) 107
Eco130I CCWWGG 2 cut(s) 1190, 1461
Eco24I GRGCYC 1 cut(s) 109
Eco47I GGWCC 2 cut(s) 316, 1300
Eco53kI GAGCTC 1 cut(s) 107
Eco57I CTGAAG 1 cut(s) 945
Eco91I GGTNACC 1 cut(s) 1004
EcoICRI GAGCTC 1 cut(s) 107
EcoO109I RGGNCCY 1 cut(s) 303
EcoO65I GGTNACC 1 cut(s) 1004
EcoRII CCWGG 1 cut(s) 517
EcoT14I CCWWGG 2 cut(s) 1190, 1461
EcoT38I GRGCYC 1 cut(s) 109
ErhI CCWWGG 2 cut(s) 1190, 1461
FaeI CATG 9 cut(s) 361, 410, 508, 532, 688, 749, 804, 1044, 1507
FaqI GGGAC 2 cut(s) 916, 1226
FatI CATG 9 cut(s) 357, 406, 504, 528, 684, 745, 800, 1040, 1503
FauI CCCGC 1 cut(s) 1157
FbaI TGATCA 1 cut(s) 204
Fnu4HI GCNGC 5 cut(s) 72, 75, 854, 1236, 1458
FokI GGATG 3 cut(s) 776, 964, 1173
FriOI GRGCYC 1 cut(s) 109
Fsp4HI GCNGC 5 cut(s) 72, 75, 854, 1236, 1458
FspBI CTAG 2 cut(s) 1154, 1431
GluI GCNGC 5 cut(s) 72, 75, 854, 1236, 1458
GsaI CCCAGC 2 cut(s) 44, 148
HaeIII GGCC 4 cut(s) 77, 305, 605, 705
HgaI GACGC 4 cut(s) 150, 1097, 1241, 1299
Hin1II CATG 9 cut(s) 361, 410, 508, 532, 688, 749, 804, 1044, 1507
HincII GTYRAC 1 cut(s) 1098
HindII GTYRAC 1 cut(s) 1098
HindIII AAGCTT 1 cut(s) 1363
HinfI GANTC 3 cut(s) 535, 611, 1348
HphI GGTGA 3 cut(s) 536, 1436, 1508
Hpy166II GTNNAC 1 cut(s) 1098
Hpy188I TCNGA 8 cut(s) 111, 175, 320, 379, 621, 697, 825, 1024
Hpy188III TCNNGA 8 cut(s) 11, 125, 329, 668, 719, 809, 1082, 1332
Hpy8I GTNNAC 1 cut(s) 1098
HpyAV CCTTC 3 cut(s) 58, 127, 484
HpyCH4III ACNGT 2 cut(s) 725, 898
HpyCH4IV ACGT 1 cut(s) 1203
HpyF10VI GCNNNNNNNGC 5 cut(s) 440, 862, 1371, 1454, 1466
HpyF3I CTNAG 6 cut(s) 108, 214, 694, 1104, 1110, 1470
HpySE526I ACGT 1 cut(s) 1203
Hsp92II CATG 9 cut(s) 361, 410, 508, 532, 688, 749, 804, 1044, 1507
Ksp22I TGATCA 1 cut(s) 204
Kzo9I GATC 6 cut(s) 7, 204, 1027, 1114, 1325, 1498
LmnI GCTCC 4 cut(s) 16, 127, 977, 1261
Lsp1109I GCAGC 3 cut(s) 840, 1247, 1469
LweI GCATC 5 cut(s) 472, 802, 1384, 1470, 1496
MaeI CTAG 2 cut(s) 1154, 1431
MaeII ACGT 1 cut(s) 1203
MaeIII GTNAC 6 cut(s) 524, 680, 1004, 1338, 1473, 1506
MalI GATC 6 cut(s) 9, 206, 1029, 1116, 1327, 1500
MbiI CCGCTC 1 cut(s) 130
MboI GATC 6 cut(s) 7, 204, 1027, 1114, 1325, 1498
MboII GAAGA 7 cut(s) 41, 127, 382, 563, 949, 1097, 1320
MflI RGATCY 2 cut(s) 1114, 1325
MhlI GDGCHC 2 cut(s) 109, 1171
MlsI TGGCCA 1 cut(s) 605
MluCI AATT 3 cut(s) 161, 233, 578
MluNI TGGCCA 1 cut(s) 605
MlyI GAGTC 2 cut(s) 529, 1342
MmeI TCCRAC 3 cut(s) 132, 812, 1278
Mox20I TGGCCA 1 cut(s) 605
MroXI GAANNNNTTC 1 cut(s) 615
MscI TGGCCA 1 cut(s) 605
MseI TTAA 8 cut(s) 246, 387, 459, 500, 560, 648, 1073, 1361
Msp20I TGGCCA 1 cut(s) 605
MspA1I CMGCKG 3 cut(s) 853, 1103, 1493
MspCI CTTAAG 1 cut(s) 386
MspR9I CCNGG 1 cut(s) 519
Mva1269I GAATGC 2 cut(s) 962, 1238
MvaI CCWGG 1 cut(s) 519
MvnI CGCG 1 cut(s) 1333
MwoI GCNNNNNNNGC 5 cut(s) 440, 862, 1371, 1454, 1466
NdeII GATC 6 cut(s) 7, 204, 1027, 1114, 1325, 1498
NlaIII CATG 9 cut(s) 361, 410, 508, 532, 688, 749, 804, 1044, 1507
NlaIV GGNNCC 2 cut(s) 304, 1302
NmuCI GTSAC 2 cut(s) 524, 680
NruI TCGCGA 1 cut(s) 1333
NspI RCATGY 3 cut(s) 410, 804, 1044
PciI ACATGT 1 cut(s) 406
PcsI WCGNNNNNNNCGW 2 cut(s) 53, 801
PctI GAATGC 2 cut(s) 962, 1238
PdmI GAANNNNTTC 1 cut(s) 615
PfeI GAWTC 1 cut(s) 611
PkrI GCNGC 5 cut(s) 73, 76, 855, 1237, 1459
PleI GAGTC 2 cut(s) 529, 1342
PpsI GAGTC 2 cut(s) 529, 1342
PscI ACATGT 1 cut(s) 406
Psp124BI GAGCTC 1 cut(s) 109
Psp6I CCWGG 1 cut(s) 517
PspEI GGTNACC 1 cut(s) 1004
PspFI CCCAGC 2 cut(s) 40, 144
PspGI CCWGG 1 cut(s) 517
PspN4I GGNNCC 2 cut(s) 304, 1302
PspPI GGNCC 3 cut(s) 303, 316, 1300
PsuI RGATCY 2 cut(s) 1114, 1325
PvuII CAGCTG 3 cut(s) 853, 1103, 1493
RruI TCGCGA 1 cut(s) 1333
RsaI GTAC 6 cut(s) 192, 491, 600, 727, 989, 1159
RsaNI GTAC 6 cut(s) 191, 490, 599, 726, 988, 1158
SacI GAGCTC 1 cut(s) 109
SaqAI TTAA 8 cut(s) 246, 387, 459, 500, 560, 648, 1073, 1361
SatI GCNGC 5 cut(s) 72, 75, 854, 1236, 1458
Sau3AI GATC 6 cut(s) 7, 204, 1027, 1114, 1325, 1498
Sau96I GGNCC 3 cut(s) 303, 316, 1300
ScaI AGTACT 1 cut(s) 491
SchI GAGTC 2 cut(s) 529, 1342
ScrFI CCNGG 1 cut(s) 519
SduI GDGCHC 2 cut(s) 109, 1171
SfaNI GCATC 5 cut(s) 472, 802, 1384, 1470, 1496
SfcI CTRYAG 1 cut(s) 100
SinI GGWCC 2 cut(s) 316, 1300
SmlI CTYRAG 1 cut(s) 386
SmoI CTYRAG 1 cut(s) 386
Sse9I AATT 3 cut(s) 161, 233, 578
SsiI CCGC 5 cut(s) 71, 74, 130, 815, 1164
SspMI CTAG 2 cut(s) 1154, 1431
SstI GAGCTC 1 cut(s) 109
StyD4I CCNGG 1 cut(s) 517
StyI CCWWGG 2 cut(s) 1190, 1461
TaaI ACNGT 2 cut(s) 725, 898
TaiI ACGT 1 cut(s) 1206
TaqI TCGA 2 cut(s) 47, 795
TasI AATT 3 cut(s) 161, 233, 578
TatI WGTACW 2 cut(s) 489, 725
TauI GCSGC 2 cut(s) 74, 77
TfiI GAWTC 1 cut(s) 611
Tru1I TTAA 8 cut(s) 246, 387, 459, 500, 560, 648, 1073, 1361
Tru9I TTAA 8 cut(s) 246, 387, 459, 500, 560, 648, 1073, 1361
TscAI CASTG 1 cut(s) 747
TseFI GTSAC 2 cut(s) 524, 680
TseI GCWGC 3 cut(s) 853, 1235, 1457
Tsp45I GTSAC 2 cut(s) 524, 680
TspRI CASTG 1 cut(s) 747
Vha464I CTTAAG 1 cut(s) 386
VpaK11BI GGWCC 2 cut(s) 316, 1300
XapI RAATTY 2 cut(s) 233, 578
XceI RCATGY 3 cut(s) 410, 804, 1044
XmnI GAANNNNTTC 1 cut(s) 615
XspI CTAG 2 cut(s) 1154, 1431
ZrmI AGTACT 1 cut(s) 491
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.