Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0011806

Physical Location & Seq

Genomic Coordinates Reverse (-)

17210049 .. 17211782

Gene Structure 1734 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G36450.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1086 bp

ATGGCGATGCTAGTTGATCCTCCAAATGGGATAAGACAAGAAGGGAAACATTACTACACGATGTGGCAAACATTATTCGAAATCGACACTAAGTATGTTCCGATTAAGCCGATTGGAAGAGGAGCTTATGGTGTGGTTTGTTCTTCAATCAACAGCGAAACCAATGAGAGAGTTGCTATTAAGAAGATCCACAATGTGTTTGAGAATCGCATCGATGCTTTGAGAACATTGAGAGAGCTTAAGCTTTTAAGGCATGTGAGACACGAAAACGTTATCTCCCTTAAGGATGTTATGCTGCCTACTCACAGGTACAGCTTCAGAGATGTTTATTTGGTCTATGAGCTTATGGATTCTGATTTGAATCAGATCATCAAATCCTCTCAGTCTCTCTCCGATGATCACTGCAAGTACTTCTTGTTTCAGTTGCTAAGAGGATTGAAGTATCTTCACTCAGCAAACATCCTTCATCGCGATTTAAAGCCAGGGAATCTCTTAGTGAATGCTAATTGTGATCTAAAGATTTGTGATTTCGGGCTTGCGAGAACTTATGAACAGTTTATGACAGAGTATGTGGTCACTCGTTGGTACCGAGCACCTGAGCTTCTTCTCTGTTGTGATAACTACGGAACCTCCATTGATGTTTGGTCGGTAGGATGCATATTCGCAGAGATTCTTGGAAGAAAACCGATATTCCCGGGAACAGAATGTCTCAACCAACTAAAGCTAATCATAAATGTTGTTGGTAGCCAACAAGACTGGGATCTCCAGTTCATAGATAACCAGAAAGCTAGGAGATTTATAAAGTCTCTTCCTTTCTCAAAGGGTACTCACTTTTCTCATATTTACCCGCACGCAAATCCGCTGGCGATAGATTTGTTACAGAGGATGCTTGTGTTTGATCCAACCAAGAGAATATCGGTCAGCGATGCGCTTTTACACCCCTACATGGAGGGACTGTTGGAACCGGAATGTAACCCGTCGGAAAATGTTCCGGTCAGTAGTTTGGAGATAGATGAGAACATGGAAGGAGATATGATCAGGGAGATGATGTGGGAAGAGATGCTTCATTACCTCCCCCGAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000165 GO:0000302 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004707 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006979 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009636 GO:0009987 GO:0010035 GO:0010468 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0035556 GO:0036211 GO:0042221 GO:0042493 GO:0042542 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046677 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0071704 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04016 map04016

Pfam Domains

Protein Families

Pkinase

Protein Analysis

361

Amino Acids

41.98

Weight (kDa)

6.23

Isoelectric Point (pI)

39.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	33 - 316	4.9e-66	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	36 - 226	2.3e-30	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011806)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18170 AT4G36450
fragaria_vesca	FvH4_1g12630 FvH4_1g12630 FvH4_1g12630
malus_domestica	MD02G1140700.v1.1 MD15G1253700.v1.1
prunus_persica	Prupe.7G160300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0100581
rosa_laevigata	RLG00000016987
rosa_multiflora	Rmu_sc0000528.1_g000005 Rmu_sc0019884.1_g000001
rosa_roxburghii	Rroxscaffold_2G00142110
rosa_rugosa	Rorug02G0089700
rosa_samantha	Rh2AG138800 Rh2BG142200 Rh2CG144500 Rh2DG143900
rosa_wichuraiana	Rw2G010880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	800
Acc65I	GGTACC	1 cut(s)	585
AccB1I	GGYRCC	1 cut(s)	585
AccII	CGCG	1 cut(s)	471
AciI	CCGC	2 cut(s)	848, 860
AclI	AACGTT	1 cut(s)	270
AclWI	GGATC	4 cut(s)	11, 181, 768, 893
AcuI	CTGAAG	1 cut(s)	301
AdeI	CACNNNGTG	2 cut(s)	63, 196
AfaI	GTAC	4 cut(s)	311, 410, 587, 826
AfiI	CCNNNNNNNGG	2 cut(s)	26, 946
AflII	CTTAAG	2 cut(s)	239, 281
AgsI	TTSAA	3 cut(s)	147, 361, 439
AjnI	CCWGG	1 cut(s)	481
AloI	GAACNNNNNNTCC	2 cut(s)	752, 784
AluBI	AGCT	9 cut(s)	125, 238, 244, 315, 343, 601, 724, 788, 1082
AluI	AGCT	9 cut(s)	125, 238, 244, 315, 343, 601, 724, 788, 1082
Alw21I	GWGCWC	1 cut(s)	595
Alw26I	GTCTC	4 cut(s)	253, 390, 713, 810
AlwI	GGATC	4 cut(s)	11, 181, 768, 893
Ama87I	CYCGRG	2 cut(s)	694, 1077
ApeKI	GCWGC	1 cut(s)	295
Asp700I	GAANNNNTTC	1 cut(s)	987
Asp718I	GGTACC	1 cut(s)	585
AspLEI	GCGC	1 cut(s)	931
AsuC2I	CCSGG	2 cut(s)	695, 696
AsuII	TTCGAA	1 cut(s)	78
AvaI	CYCGRG	2 cut(s)	694, 1077
BanI	GGYRCC	1 cut(s)	585
Bbv12I	GWGCWC	1 cut(s)	595
BbvI	GCAGC	1 cut(s)	282
BciT130I	CCWGG	1 cut(s)	483
BclI	TGATCA	2 cut(s)	397, 1035
BcnI	CCSGG	2 cut(s)	695, 696
BcoDI	GTCTC	4 cut(s)	253, 390, 713, 810
BfaI	CTAG	2 cut(s)	11, 789
BfrI	CTTAAG	2 cut(s)	239, 281
BisI	GCNGC	1 cut(s)	296
BlsI	GCNGC	1 cut(s)	297
BmcAI	AGTACT	1 cut(s)	410
Bme1390I	CCNGG	3 cut(s)	483, 695, 696
BmeT110I	CYCGRG	2 cut(s)	694, 1077
BmiI	GGNNCC	3 cut(s)	587, 628, 963
BmrFI	CCNGG	3 cut(s)	483, 695, 696
BmrI	ACTGGG	1 cut(s)	766
BmsI	GCATC	6 cut(s)	205, 219, 644, 876, 916, 1050
BmuI	ACTGGG	1 cut(s)	766
BpmI	CTGGAG	1 cut(s)	749
Bpu10I	CCTNAGC	1 cut(s)	597
Bpu14I	TTCGAA	1 cut(s)	78
BpuMI	CCSGG	2 cut(s)	695, 696
Bsa29I	ATCGAT	1 cut(s)	213
BsaBI	GATNNNNATC	1 cut(s)	360
BsaJI	CCNNGG	2 cut(s)	482, 694
BsaWI	WCCGGW	2 cut(s)	964, 991
BsaXI	ACNNNNNCTCC	8 cut(s)	260, 290, 614, 644, 941, 971, 1034, 1064
Bsc4I	CCNNNNNNNGG	2 cut(s)	26, 946
Bse1I	ACTGG	2 cut(s)	761, 766
Bse8I	GATNNNNATC	1 cut(s)	360
BseBI	CCWGG	1 cut(s)	483
BseCI	ATCGAT	1 cut(s)	213
BseDI	CCNNGG	2 cut(s)	482, 694
BseGI	GGATG	4 cut(s)	292, 459, 659, 891
BseJI	GATNNNNATC	1 cut(s)	360
BseLI	CCNNNNNNNGG	2 cut(s)	26, 946
BseMII	CTCAG	3 cut(s)	395, 465, 588
BseNI	ACTGG	2 cut(s)	761, 766
BseRI	GAGGAG	1 cut(s)	135
BseXI	GCAGC	1 cut(s)	282
Bsh1236I	CGCG	1 cut(s)	471
BshNI	GGYRCC	1 cut(s)	585
BshVI	ATCGAT	1 cut(s)	213
BsiHKAI	GWGCWC	1 cut(s)	595
BsiHKCI	CYCGRG	2 cut(s)	694, 1077
BsiSI	CCGG	3 cut(s)	695, 965, 992
BslFI	GGGAC	1 cut(s)	966
BslI	CCNNNNNNNGG	2 cut(s)	26, 946
BsmAI	GTCTC	4 cut(s)	253, 390, 713, 810
BsmFI	GGGAC	1 cut(s)	966
BsmI	GAATGC	1 cut(s)	505
BsoBI	CYCGRG	2 cut(s)	694, 1077
Bsp119I	TTCGAA	1 cut(s)	78
Bsp1286I	GDGCHC	1 cut(s)	595
Bsp143I	GATC	8 cut(s)	16, 186, 366, 397, 511, 760, 898, 1035
Bsp68I	TCGCGA	1 cut(s)	471
BspACI	CCGC	2 cut(s)	848, 860
BspCNI	CTCAG	3 cut(s)	394, 464, 589
BspDI	ATCGAT	1 cut(s)	213
BspFNI	CGCG	1 cut(s)	471
BspLI	GGNNCC	3 cut(s)	587, 628, 963
BspPI	GGATC	4 cut(s)	11, 181, 768, 893
BspT104I	TTCGAA	1 cut(s)	78
BspT107I	GGYRCC	1 cut(s)	585
BspTI	CTTAAG	2 cut(s)	239, 281
BsrI	ACTGG	2 cut(s)	761, 766
BssECI	CCNNGG	2 cut(s)	482, 694
BssMI	GATC	8 cut(s)	16, 186, 366, 397, 511, 760, 898, 1035
Bst2UI	CCWGG	1 cut(s)	483
Bst4CI	ACNGT	2 cut(s)	555, 957
Bst6I	CTCTTC	3 cut(s)	112, 813, 1050
BstAFI	CTTAAG	2 cut(s)	239, 281
BstBI	TTCGAA	1 cut(s)	78
BstC8I	GCNNGC	3 cut(s)	537, 852, 864
BstDEI	CTNAG	6 cut(s)	90, 381, 428, 451, 493, 597
BstF5I	GGATG	4 cut(s)	292, 459, 659, 891
BstFNI	CGCG	1 cut(s)	471
BstHHI	GCGC	1 cut(s)	931
BstKTI	GATC	8 cut(s)	19, 189, 369, 400, 514, 763, 901, 1038
BstMAI	GTCTC	4 cut(s)	253, 390, 713, 810
BstMBI	GATC	8 cut(s)	16, 186, 366, 397, 511, 760, 898, 1035
BstMWI	GCNNNNNNNGC	1 cut(s)	250
BstNI	CCWGG	1 cut(s)	483
BstNSI	RCATGY	1 cut(s)	257
BstSCI	CCNGG	3 cut(s)	481, 693, 694
BstUI	CGCG	1 cut(s)	471
BstV1I	GCAGC	1 cut(s)	282
BstX2I	RGATCY	2 cut(s)	186, 760
BstYI	RGATCY	2 cut(s)	186, 760
Bsu15I	ATCGAT	1 cut(s)	213
BsuTUI	ATCGAT	1 cut(s)	213
BtgZI	GCGATG	3 cut(s)	20, 452, 939
BtsCI	GGATG	4 cut(s)	292, 459, 659, 891
BtsI	GCAGTG	1 cut(s)	400
BtsIMutI	CAGTG	1 cut(s)	400
BtuMI	TCGCGA	1 cut(s)	471
Cac8I	GCNNGC	3 cut(s)	537, 852, 864
CfoI	GCGC	1 cut(s)	931
Cfr9I	CCCGGG	1 cut(s)	694
ClaI	ATCGAT	1 cut(s)	213
Csp6I	GTAC	4 cut(s)	310, 409, 586, 825
CviAII	CATG	3 cut(s)	254, 946, 1021
CviQI	GTAC	4 cut(s)	310, 409, 586, 825
DdeI	CTNAG	6 cut(s)	90, 381, 428, 451, 493, 597
DpnI	GATC	8 cut(s)	18, 188, 368, 399, 513, 762, 900, 1037
DpnII	GATC	8 cut(s)	16, 186, 366, 397, 511, 760, 898, 1035
DraI	TTTAAA	1 cut(s)	477
DraIII	CACNNNGTG	2 cut(s)	63, 196
Eam1104I	CTCTTC	3 cut(s)	112, 813, 1050
EarI	CTCTTC	3 cut(s)	112, 813, 1050
Eco57I	CTGAAG	1 cut(s)	301
Eco88I	CYCGRG	2 cut(s)	694, 1077
EcoRII	CCWGG	1 cut(s)	481
EcoT22I	ATGCAT	1 cut(s)	659
FaeI	CATG	3 cut(s)	257, 949, 1024
FalI	AAGNNNNNCTT	6 cut(s)	109, 141, 398, 430, 1047, 1079
FaqI	GGGAC	1 cut(s)	966
FatI	CATG	3 cut(s)	253, 945, 1020
FauI	CCCGC	1 cut(s)	855
FbaI	TGATCA	2 cut(s)	397, 1035
Fnu4HI	GCNGC	1 cut(s)	296
FokI	GGATG	4 cut(s)	299, 446, 666, 898
Fsp4HI	GCNGC	1 cut(s)	296
FspBI	CTAG	2 cut(s)	11, 789
GlaI	GCGC	1 cut(s)	930
GluI	GCNGC	1 cut(s)	296
GsuI	CTGGAG	1 cut(s)	749
HapII	CCGG	3 cut(s)	695, 965, 992
HhaI	GCGC	1 cut(s)	931
Hin1II	CATG	3 cut(s)	257, 949, 1024
Hin6I	GCGC	1 cut(s)	929
HinP1I	GCGC	1 cut(s)	929
HindIII	AAGCTT	1 cut(s)	242
HinfI	GANTC	5 cut(s)	205, 350, 361, 487, 670
HpaII	CCGG	3 cut(s)	695, 965, 992
Hpy188I	TCNGA	6 cut(s)	102, 320, 355, 366, 394, 982
Hpy188III	TCNNGA	1 cut(s)	470
Hpy99I	CGWCG	1 cut(s)	982
HpyAV	CCTTC	3 cut(s)	35, 473, 1019
HpyCH4III	ACNGT	2 cut(s)	555, 957
HpyCH4IV	ACGT	1 cut(s)	270
HpyCH4V	TGCA	2 cut(s)	405, 657
HpyF10VI	GCNNNNNNNGC	1 cut(s)	250
HpyF3I	CTNAG	6 cut(s)	90, 381, 428, 451, 493, 597
HpySE526I	ACGT	1 cut(s)	270
Hsp92II	CATG	3 cut(s)	257, 949, 1024
HspAI	GCGC	1 cut(s)	929
KpnI	GGTACC	1 cut(s)	589
Ksp22I	TGATCA	2 cut(s)	397, 1035
Kzo9I	GATC	8 cut(s)	16, 186, 366, 397, 511, 760, 898, 1035
LmnI	GCTCC	1 cut(s)	122
Lsp1109I	GCAGC	1 cut(s)	282
LweI	GCATC	6 cut(s)	205, 219, 644, 876, 916, 1050
MaeI	CTAG	2 cut(s)	11, 789
MaeII	ACGT	1 cut(s)	270
MaeIII	GTNAC	3 cut(s)	574, 876, 971
MalI	GATC	8 cut(s)	18, 188, 368, 399, 513, 762, 900, 1037
MboI	GATC	8 cut(s)	16, 186, 366, 397, 511, 760, 898, 1035
MboII	GAAGA	8 cut(s)	129, 135, 196, 437, 596, 690, 800, 1067
MflI	RGATCY	2 cut(s)	186, 760
MhlI	GDGCHC	1 cut(s)	595
MluCI	AATT	1 cut(s)	505
MmeI	TCCRAC	3 cut(s)	926, 939, 960
MnlI	CCTC	8 cut(s)	30, 113, 388, 425, 640, 876, 943, 1082
Mph1103I	ATGCAT	1 cut(s)	659
MroXI	GAANNNNTTC	1 cut(s)	987
MseI	TTAA	7 cut(s)	105, 180, 240, 248, 282, 476, 1084
MspA1I	CMGCKG	1 cut(s)	862
MspCI	CTTAAG	2 cut(s)	239, 281
MspI	CCGG	3 cut(s)	695, 965, 992
MspR9I	CCNGG	3 cut(s)	483, 695, 696
Mva1269I	GAATGC	1 cut(s)	505
MvaI	CCWGG	1 cut(s)	483
MvnI	CGCG	1 cut(s)	471
MwoI	GCNNNNNNNGC	1 cut(s)	250
NciI	CCSGG	2 cut(s)	695, 696
NdeII	GATC	8 cut(s)	16, 186, 366, 397, 511, 760, 898, 1035
NlaIII	CATG	3 cut(s)	257, 949, 1024
NlaIV	GGNNCC	3 cut(s)	587, 628, 963
NmuCI	GTSAC	1 cut(s)	574
NruI	TCGCGA	1 cut(s)	471
NsiI	ATGCAT	1 cut(s)	659
NspI	RCATGY	1 cut(s)	257
NspV	TTCGAA	1 cut(s)	78
PcsI	WCGNNNNNNNCGW	1 cut(s)	586
PctI	GAATGC	1 cut(s)	505
PdmI	GAANNNNTTC	1 cut(s)	987
PfeI	GAWTC	5 cut(s)	205, 350, 361, 487, 670
PkrI	GCNGC	1 cut(s)	297
PsiI	TTATAA	1 cut(s)	800
Psp1406I	AACGTT	1 cut(s)	270
Psp6I	CCWGG	1 cut(s)	481
PspGI	CCWGG	1 cut(s)	481
PspN4I	GGNNCC	3 cut(s)	587, 628, 963
PsuI	RGATCY	2 cut(s)	186, 760
RruI	TCGCGA	1 cut(s)	471
RsaI	GTAC	4 cut(s)	311, 410, 587, 826
RsaNI	GTAC	4 cut(s)	310, 409, 586, 825
SaqAI	TTAA	7 cut(s)	105, 180, 240, 248, 282, 476, 1084
SatI	GCNGC	1 cut(s)	296
Sau3AI	GATC	8 cut(s)	16, 186, 366, 397, 511, 760, 898, 1035
ScaI	AGTACT	1 cut(s)	410
ScrFI	CCNGG	3 cut(s)	483, 695, 696
SduI	GDGCHC	1 cut(s)	595
SfaNI	GCATC	6 cut(s)	205, 219, 644, 876, 916, 1050
SfuI	TTCGAA	1 cut(s)	78
SmaI	CCCGGG	1 cut(s)	696
SmlI	CTYRAG	2 cut(s)	239, 281
SmoI	CTYRAG	2 cut(s)	239, 281
Sse9I	AATT	1 cut(s)	505
SsiI	CCGC	2 cut(s)	848, 860
SspMI	CTAG	2 cut(s)	11, 789
StyD4I	CCNGG	3 cut(s)	481, 693, 694
TaaI	ACNGT	2 cut(s)	555, 957
TaiI	ACGT	1 cut(s)	273
TaqI	TCGA	3 cut(s)	78, 84, 213
TaqII	GACCGA	1 cut(s)	907
TasI	AATT	1 cut(s)	505
TatI	WGTACW	1 cut(s)	408
TfiI	GAWTC	5 cut(s)	205, 350, 361, 487, 670
Tru1I	TTAA	7 cut(s)	105, 180, 240, 248, 282, 476, 1084
Tru9I	TTAA	7 cut(s)	105, 180, 240, 248, 282, 476, 1084
TscAI	CASTG	1 cut(s)	407
TseFI	GTSAC	1 cut(s)	574
TseI	GCWGC	1 cut(s)	295
Tsp45I	GTSAC	1 cut(s)	574
TspDTI	ATGAA	4 cut(s)	455, 564, 760, 1055
TspGWI	ACGGA	1 cut(s)	639
TspMI	CCCGGG	1 cut(s)	694
TspRI	CASTG	1 cut(s)	407
Vha464I	CTTAAG	2 cut(s)	239, 281
XceI	RCATGY	1 cut(s)	257
XmaI	CCCGGG	1 cut(s)	694
XmnI	GAANNNNTTC	1 cut(s)	987
XspI	CTAG	2 cut(s)	11, 789
ZrmI	AGTACT	1 cut(s)	410
Zsp2I	ATGCAT	1 cut(s)	659

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.