Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0011806

Physical Location & Seq

Genomic Coordinates Forward (+)

21405605 .. 21408509

Gene Structure 2905 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1253700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1137 bp

ATGGCAACTTTAGTTGAGCCTCCGAATGGAATTAGGCAACGGGGGAAGCATTATTACTCAATGTGGCAAACATTGTTTGAGGTTGACACCAAGTACGTACCGATCAAACCCATAGGGAAAGGAGCATATGGTGTAGTGTGCTCGTCAATCAATAGGGAAACGAATGAGAAAGTTGCAATCAAGAAGATCAATAATGTGTTTGAGAACAGCATTGATGCATTGAGGACTCTGAGGGAGTTGAAGCTTCTTAAACATATCCGGCACGAAAATGTGATTGCTTTGAAGGATGTTATGATGCCTATCCACAGGACAAGTTTCAAAGATGTGTACTTCGTTTACGAGCTCATGGATACGGATCTTCATCATATTATAAAGTCATCCCAACCACTTTCCAGTGACCATTGCAAATACTTCCTATTTCAGCTGCTTCGAGGGCTCAAGTATCTTCATTCAGCAAACATCCTTCACCGTGATTTGAAGCCTGGCAACCTGCTAGTCAATGCTAACTGCGACTTGAAAATATGTGACTTTGGGTTGGCCCGAACCAGCGGAGGTAGAGGCCAGTTCATGACAGAGTATGTTGTCACTCGCTGGTATCGTGCACCAGAGCTGCTATTGTGCTGTGACAATTATGGAACATCCATTGACGTCTGGTCCGTAGGATGCATCTTTGCTGAAATTCTTGGCCGGAAGCCAATCTTTCCTGGAACTGAATGCCTCAACCAACTAAAACTAATTATCAATGTTCTTGGTAGCCAGAATGAGCCTGATCTTGCATTCATTGACAACCCGAAAGCCAGGAAGTACATCCAATCACTGCCCCTTTCTAGGGGGACACATTTGTCCCGTTTATACCCCCAAGCCGATCCTTTAGCTATAGATTTGTTGCAAAGGATGCTTGTGTTTGATCCAACTAAGAGGATCTCCGTCTCAGAATCACTCCAACACCCTTACATGTCAGAGCTATATGATCCGAGGTCTGATCCTCTTGCCCAGGTTCCCATCAGCCTCGATATAGATGAGAATATGGGGGAACCAATGATCAGGGAGATGATGTGGAACGAGATGCTTCGCTACCATCCAGAAGCTGTCCAGATGCTTCACTACCATCCAGAAGGGGCTTATGTGCATGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000165 GO:0000302 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004707 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006979 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009636 GO:0009987 GO:0010035 GO:0010468 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0035556 GO:0036211 GO:0042221 GO:0042493 GO:0042542 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046677 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0071704 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04016 map04016

Pfam Domains

Protein Families

Pkinase

Protein Analysis

379

Amino Acids

43.5

Weight (kDa)

7.65

Isoelectric Point (pI)

36.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	33 - 319	1e-67	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	36 - 229	8.7e-31	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011806)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18170 AT4G36450
fragaria_vesca	FvH4_1g12630 FvH4_1g12630 FvH4_1g12630
malus_domestica	MD02G1140700.v1.1 MD15G1253700.v1.1
prunus_persica	Prupe.7G160300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0100581
rosa_laevigata	RLG00000016987
rosa_multiflora	Rmu_sc0000528.1_g000005 Rmu_sc0019884.1_g000001
rosa_roxburghii	Rroxscaffold_2G00142110
rosa_rugosa	Rorug02G0089700
rosa_samantha	Rh2AG138800 Rh2BG142200 Rh2CG144500 Rh2DG143900
rosa_wichuraiana	Rw2G010880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	371
AasI	GACNNNNNNGTC	1 cut(s)	841
AatII	GACGTC	1 cut(s)	651
Acc36I	ACCTGC	1 cut(s)	498
AciI	CCGC	1 cut(s)	549
AclWI	GGATC	6 cut(s)	363, 860, 902, 929, 965, 977
AcoI	YGGCCR	1 cut(s)	685
AcsI	RAATTY	1 cut(s)	678
AcyI	GRCGYC	1 cut(s)	648
AfaI	GTAC	4 cut(s)	95, 99, 329, 806
AfiI	CCNNNNNNNGG	3 cut(s)	26, 828, 829
AflIII	ACRYGT	1 cut(s)	954
AgsI	TTSAA	5 cut(s)	241, 283, 319, 478, 517
AhdI	GACNNNNNGTC	1 cut(s)	652
AjnI	CCWGG	4 cut(s)	481, 703, 797, 993
AluBI	AGCT	7 cut(s)	244, 343, 424, 610, 875, 964, 1088
AluI	AGCT	7 cut(s)	244, 343, 424, 610, 875, 964, 1088
Alw21I	GWGCWC	3 cut(s)	143, 345, 604
Alw26I	GTCTC	1 cut(s)	934
Alw44I	GTGCAC	1 cut(s)	600
AlwI	GGATC	6 cut(s)	363, 860, 902, 929, 965, 977
AlwNI	CAGNNNCTG	1 cut(s)	1088
AoxI	GGCC	3 cut(s)	537, 559, 685
ApaLI	GTGCAC	1 cut(s)	600
ApeKI	GCWGC	2 cut(s)	424, 610
ApoI	RAATTY	1 cut(s)	678
AspS9I	GGNCC	2 cut(s)	538, 654
AsuHPI	GGTGA	1 cut(s)	458
AvaII	GGWCC	1 cut(s)	654
BaeGI	GKGCMC	1 cut(s)	604
BanII	GRGCYC	2 cut(s)	345, 438
BarI	GAAGNNNNNNTAC	2 cut(s)	38, 70
Bbv12I	GWGCWC	3 cut(s)	143, 345, 604
BbvI	GCAGC	2 cut(s)	411, 597
BccI	CCATC	3 cut(s)	1010, 1086, 1116
BciT130I	CCWGG	4 cut(s)	483, 705, 799, 995
BciVI	GTATCC	1 cut(s)	343
BclI	TGATCA	1 cut(s)	1041
BcoDI	GTCTC	1 cut(s)	934
BfaI	CTAG	2 cut(s)	494, 828
BfmI	CTRYAG	1 cut(s)	876
BfuAI	ACCTGC	1 cut(s)	498
BfuI	GTATCC	1 cut(s)	343
BisI	GCNGC	2 cut(s)	425, 611
BlsI	GCNGC	2 cut(s)	426, 612
Bme1390I	CCNGG	4 cut(s)	483, 705, 799, 995
Bme18I	GGWCC	1 cut(s)	654
BmeRI	GACNNNNNGTC	1 cut(s)	652
BmgT120I	GGNCC	2 cut(s)	538, 654
BmiI	GGNNCC	2 cut(s)	999, 1035
BmrFI	CCNGG	4 cut(s)	483, 705, 799, 995
BmsI	GCATC	7 cut(s)	205, 285, 653, 675, 885, 1056, 1086
BpuEI	CTTGAG	1 cut(s)	422
BsaAI	YACGTR	1 cut(s)	97
BsaBI	GATNNNNATC	3 cut(s)	299, 354, 360
BsaHI	GRCGYC	1 cut(s)	648
BsaJI	CCNNGG	2 cut(s)	974, 993
BsaXI	ACNNNNNCTCC	2 cut(s)	1040, 1070
Bsc4I	CCNNNNNNNGG	3 cut(s)	26, 828, 829
Bse1I	ACTGG	2 cut(s)	393, 562
Bse3DI	GCAATG	1 cut(s)	400
Bse8I	GATNNNNATC	3 cut(s)	299, 354, 360
BseBI	CCWGG	4 cut(s)	483, 705, 799, 995
BseDI	CCNNGG	2 cut(s)	974, 993
BseGI	GGATG	9 cut(s)	292, 377, 459, 638, 668, 807, 900, 1078, 1108
BseJI	GATNNNNATC	3 cut(s)	299, 354, 360
BseLI	CCNNNNNNNGG	3 cut(s)	26, 828, 829
BseMI	GCAATG	1 cut(s)	400
BseMII	CTCAG	2 cut(s)	221, 945
BseNI	ACTGG	2 cut(s)	393, 562
BseSI	GKGCMC	1 cut(s)	604
BseXI	GCAGC	2 cut(s)	411, 597
BshFI	GGCC	3 cut(s)	539, 561, 687
BsiHKAI	GWGCWC	3 cut(s)	143, 345, 604
BsiSI	CCGG	2 cut(s)	259, 688
BslFI	GGGAC	2 cut(s)	829, 847
BslI	CCNNNNNNNGG	3 cut(s)	26, 828, 829
BsmAI	GTCTC	1 cut(s)	934
BsmBI	CGTCTC	1 cut(s)	934
BsmFI	GGGAC	2 cut(s)	829, 847
BsmI	GAATGC	2 cut(s)	719, 776
BsnI	GGCC	3 cut(s)	539, 561, 687
Bsp1286I	GDGCHC	4 cut(s)	143, 345, 438, 604
BspACI	CCGC	1 cut(s)	549
BspANI	GGCC	3 cut(s)	539, 561, 687
BspCNI	CTCAG	2 cut(s)	222, 944
BspHI	TCATGA	1 cut(s)	567
BspLI	GGNNCC	2 cut(s)	999, 1035
BspMI	ACCTGC	1 cut(s)	498
BspPI	GGATC	6 cut(s)	363, 860, 902, 929, 965, 977
BsrDI	GCAATG	1 cut(s)	400
BsrI	ACTGG	2 cut(s)	393, 562
BssECI	CCNNGG	2 cut(s)	974, 993
BssNI	GRCGYC	1 cut(s)	648
Bst2UI	CCWGG	4 cut(s)	483, 705, 799, 995
Bst4CI	ACNGT	1 cut(s)	470
BstACI	GRCGYC	1 cut(s)	648
BstAPI	GCANNNNNTGC	1 cut(s)	895
BstBAI	YACGTR	1 cut(s)	97
BstC8I	GCNNGC	1 cut(s)	1131
BstDEI	CTNAG	4 cut(s)	230, 915, 931, 1134
BstF5I	GGATG	9 cut(s)	292, 377, 459, 638, 668, 807, 900, 1078, 1108
BstMAI	GTCTC	1 cut(s)	934
BstMWI	GCNNNNNNNGC	2 cut(s)	433, 895
BstNI	CCWGG	4 cut(s)	483, 705, 799, 995
BstNSI	RCATGY	2 cut(s)	958, 1133
BstSCI	CCNGG	4 cut(s)	481, 703, 797, 993
BstSFI	CTRYAG	1 cut(s)	876
BstSLI	GKGCMC	1 cut(s)	604
BstSNI	TACGTA	1 cut(s)	97
BstV1I	GCAGC	2 cut(s)	411, 597
BstX2I	RGATCY	2 cut(s)	355, 921
BstYI	RGATCY	2 cut(s)	355, 921
BsuI	GTATCC	1 cut(s)	343
BsuRI	GGCC	3 cut(s)	539, 561, 687
BtsCI	GGATG	9 cut(s)	292, 377, 459, 638, 668, 807, 900, 1078, 1108
BtsI	GCAGTG	1 cut(s)	815
BtsIMutI	CAGTG	2 cut(s)	400, 815
BveI	ACCTGC	1 cut(s)	498
Cac8I	GCNNGC	1 cut(s)	1131
CaiI	CAGNNNCTG	1 cut(s)	1088
CciI	TCATGA	1 cut(s)	567
Cfr13I	GGNCC	2 cut(s)	538, 654
Csp6I	GTAC	4 cut(s)	94, 98, 328, 805
CviAII	CATG	4 cut(s)	346, 568, 955, 1130
CviQI	GTAC	4 cut(s)	94, 98, 328, 805
DdeI	CTNAG	4 cut(s)	230, 915, 931, 1134
DrdI	GACNNNNNNGTC	1 cut(s)	841
DriI	GACNNNNNGTC	1 cut(s)	652
DseDI	GACNNNNNNGTC	1 cut(s)	841
EaeI	YGGCCR	1 cut(s)	685
Eam1105I	GACNNNNNGTC	1 cut(s)	652
Ecl136II	GAGCTC	1 cut(s)	343
Eco105I	TACGTA	1 cut(s)	97
Eco24I	GRGCYC	2 cut(s)	345, 438
Eco47I	GGWCC	1 cut(s)	654
Eco53kI	GAGCTC	1 cut(s)	343
EcoICRI	GAGCTC	1 cut(s)	343
EcoRII	CCWGG	4 cut(s)	481, 703, 797, 993
EcoT22I	ATGCAT	2 cut(s)	220, 668
EcoT38I	GRGCYC	2 cut(s)	345, 438
Esp3I	CGTCTC	1 cut(s)	934
FaeI	CATG	4 cut(s)	349, 571, 958, 1133
FalI	AAGNNNNNCTT	2 cut(s)	683, 715
FaqI	GGGAC	2 cut(s)	829, 847
FatI	CATG	4 cut(s)	345, 567, 954, 1129
FauNDI	CATATG	1 cut(s)	127
FbaI	TGATCA	1 cut(s)	1041
Fnu4HI	GCNGC	2 cut(s)	425, 611
FokI	GGATG	9 cut(s)	299, 364, 446, 625, 675, 794, 907, 1065, 1095
FriOI	GRGCYC	2 cut(s)	345, 438
Fsp4HI	GCNGC	2 cut(s)	425, 611
FspBI	CTAG	2 cut(s)	494, 828
GluI	GCNGC	2 cut(s)	425, 611
HaeIII	GGCC	3 cut(s)	539, 561, 687
HapII	CCGG	2 cut(s)	259, 688
Hin1I	GRCGYC	1 cut(s)	648
Hin1II	CATG	4 cut(s)	349, 571, 958, 1133
HincII	GTYRAC	1 cut(s)	85
HindII	GTYRAC	1 cut(s)	85
HindIII	AAGCTT	1 cut(s)	242
HinfI	GANTC	2 cut(s)	226, 935
HpaII	CCGG	2 cut(s)	259, 688
HphI	GGTGA	1 cut(s)	458
Hpy166II	GTNNAC	4 cut(s)	85, 328, 337, 602
Hpy188I	TCNGA	6 cut(s)	24, 231, 934, 961, 975, 982
Hpy188III	TCNNGA	5 cut(s)	181, 568, 1082, 1093, 1112
Hpy8I	GTNNAC	4 cut(s)	85, 328, 337, 602
HpyAV	CCTTC	3 cut(s)	277, 473, 1109
HpyCH4III	ACNGT	1 cut(s)	470
HpyCH4IV	ACGT	2 cut(s)	96, 648
HpyCH4V	TGCA	8 cut(s)	176, 218, 405, 602, 666, 776, 889, 1129
HpyF10VI	GCNNNNNNNGC	2 cut(s)	433, 895
HpyF3I	CTNAG	4 cut(s)	230, 915, 931, 1134
HpySE526I	ACGT	2 cut(s)	96, 648
Hsp92I	GRCGYC	1 cut(s)	648
Hsp92II	CATG	4 cut(s)	349, 571, 958, 1133
Ksp22I	TGATCA	1 cut(s)	1041
LmnI	GCTCC	1 cut(s)	122
Lsp1109I	GCAGC	2 cut(s)	411, 597
LweI	GCATC	7 cut(s)	205, 285, 653, 675, 885, 1056, 1086
MaeI	CTAG	2 cut(s)	494, 828
MaeII	ACGT	2 cut(s)	96, 648
MaeIII	GTNAC	4 cut(s)	395, 524, 583, 623
MboII	GAAGA	3 cut(s)	196, 350, 437
MflI	RGATCY	2 cut(s)	355, 921
MhlI	GDGCHC	4 cut(s)	143, 345, 438, 604
MluCI	AATT	4 cut(s)	30, 628, 678, 735
MlyI	GAGTC	1 cut(s)	220
MmeI	TCCRAC	2 cut(s)	935, 967
Mph1103I	ATGCAT	2 cut(s)	220, 668
MseI	TTAA	1 cut(s)	249
MslI	CAYNNNNRTG	1 cut(s)	267
MspA1I	CMGCKG	2 cut(s)	424, 549
MspI	CCGG	2 cut(s)	259, 688
MspR9I	CCNGG	4 cut(s)	483, 705, 799, 995
Mva1269I	GAATGC	2 cut(s)	719, 776
MvaI	CCWGG	4 cut(s)	483, 705, 799, 995
MwoI	GCNNNNNNNGC	2 cut(s)	433, 895
NdeI	CATATG	1 cut(s)	127
NlaIII	CATG	4 cut(s)	349, 571, 958, 1133
NlaIV	GGNNCC	2 cut(s)	999, 1035
NmuCI	GTSAC	4 cut(s)	395, 524, 583, 623
NsiI	ATGCAT	2 cut(s)	220, 668
NspI	RCATGY	2 cut(s)	958, 1133
PaeI	GCATGC	1 cut(s)	1133
PagI	TCATGA	1 cut(s)	567
PciI	ACATGT	1 cut(s)	954
PcsI	WCGNNNNNNNCGW	2 cut(s)	595, 654
PctI	GAATGC	2 cut(s)	719, 776
PfeI	GAWTC	1 cut(s)	935
PfoI	TCCNGGA	1 cut(s)	703
PkrI	GCNGC	2 cut(s)	426, 612
PleI	GAGTC	1 cut(s)	220
PpsI	GAGTC	1 cut(s)	220
Ppu21I	YACGTR	1 cut(s)	97
PscI	ACATGT	1 cut(s)	954
PsiI	TTATAA	1 cut(s)	371
Psp124BI	GAGCTC	1 cut(s)	345
Psp6I	CCWGG	4 cut(s)	481, 703, 797, 993
PspGI	CCWGG	4 cut(s)	481, 703, 797, 993
PspN4I	GGNNCC	2 cut(s)	999, 1035
PspPI	GGNCC	2 cut(s)	538, 654
PstNI	CAGNNNCTG	1 cut(s)	1088
PsuI	RGATCY	2 cut(s)	355, 921
PvuII	CAGCTG	1 cut(s)	424
RsaI	GTAC	4 cut(s)	95, 99, 329, 806
RsaNI	GTAC	4 cut(s)	94, 98, 328, 805
RseI	CAYNNNNRTG	1 cut(s)	267
SacI	GAGCTC	1 cut(s)	345
SaqAI	TTAA	1 cut(s)	249
SatI	GCNGC	2 cut(s)	425, 611
Sau96I	GGNCC	2 cut(s)	538, 654
SchI	GAGTC	1 cut(s)	220
ScrFI	CCNGG	4 cut(s)	483, 705, 799, 995
SduI	GDGCHC	4 cut(s)	143, 345, 438, 604
SfaNI	GCATC	7 cut(s)	205, 285, 653, 675, 885, 1056, 1086
SfcI	CTRYAG	1 cut(s)	876
SinI	GGWCC	1 cut(s)	654
SmiMI	CAYNNNNRTG	1 cut(s)	267
SmlI	CTYRAG	1 cut(s)	437
SmoI	CTYRAG	1 cut(s)	437
SnaBI	TACGTA	1 cut(s)	97
SphI	GCATGC	1 cut(s)	1133
Sse9I	AATT	4 cut(s)	30, 628, 678, 735
SsiI	CCGC	1 cut(s)	549
SspMI	CTAG	2 cut(s)	494, 828
SstI	GAGCTC	1 cut(s)	345
StyD4I	CCNGG	4 cut(s)	481, 703, 797, 993
TaaI	ACNGT	1 cut(s)	470
TaiI	ACGT	2 cut(s)	99, 651
TaqI	TCGA	2 cut(s)	430, 1011
TasI	AATT	4 cut(s)	30, 628, 678, 735
TatI	WGTACW	2 cut(s)	327, 804
TfiI	GAWTC	1 cut(s)	935
Tru1I	TTAA	1 cut(s)	249
Tru9I	TTAA	1 cut(s)	249
TscAI	CASTG	2 cut(s)	400, 822
TseFI	GTSAC	4 cut(s)	395, 524, 583, 623
TseI	GCWGC	2 cut(s)	424, 610
Tsp45I	GTSAC	4 cut(s)	395, 524, 583, 623
TspDTI	ATGAA	4 cut(s)	350, 437, 556, 769
TspGWI	ACGGA	3 cut(s)	368, 646, 916
TspRI	CASTG	2 cut(s)	400, 822
VneI	GTGCAC	1 cut(s)	600
VpaK11BI	GGWCC	1 cut(s)	654
XapI	RAATTY	1 cut(s)	678
XceI	RCATGY	2 cut(s)	958, 1133
XspI	CTAG	2 cut(s)	494, 828
ZraI	GACGTC	1 cut(s)	649
Zsp2I	ATGCAT	2 cut(s)	220, 668

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.