AT4G36610

hydrolase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0011037
Physical Location & Seq
Reverse (-)
17265332 .. 17267472
2141 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G36610.1

Sequence Viewer

Length: 954 bp
ATGGTGAACTTTGTTGAGGTACAAAAACCATTGTTGTACGGTCTGATGAAAATGGCTGGCGTCGTTCCTTACACTTTAGAGATCGAACCAGGGACGAAGATCAACTTTTGGGTCCCTAAGGAAACCCTAAAGAAGAATTCCGGTACCGGAAAACCAACGAAACCCGATAAACCTAAAAAGCCTGTCGTCTTGTTAATCCATGGTTTCGCTGGCGAAGGAATCGTGACGTGGCAGTTCCAAGTCGGTGCATTATCCAAGAAATACTCGGTCTACATACCGGACCTCCTCTTTTTCGGTGGATCCTACACCGACAACTCGGACCGGTCTCCGGCGTTTCAAGCCGACTGTTTGGTCAAGGGGCTTCGTATCCTCGGCGTGGATAAGTTTGTTCCCGTAGGGTTTAGCTACGGGGGCATGGTGGCTTTCAAGATCGCTGAAGCTTACCCGGACATGGTTAGAGCAATCGTTGTGTCTGGTTCGATTCCCACAATGACCGATACCATTAATGAGGCGAGCTTGAACCGGTTAGGGTTTAGTTCTTCCACGGATCTCTTGTTACCGACTTCTGTTACGGGACTTAAGGCTCTCTTCACCATTGCTGTGCATAAACCCTTGTGGTTCCCTAAACGATTGTTCAAAGACTACATCGAGGTAATGTTTAACAACAGAAAAGAAAGAGCTGAACTGTTAGAGGCTGTTGTGGTCAGCAACAAGGAAGCGCAAATCCCTCATTTCCCACGGAAAATACATTTCTTGTGGGGTGAAAGTGATCAAATCTTTGATCTCGAATTGGCTAGAGACATGAAAGAACAAATAGGTGAGAACGCAACAATAGAGAGTATAAAGAAGGCAGGCCATTTGGTACAATTGGAAAGACCTTGTGTTTACAATAGGCGTCTCAAAAAGTTTCTTGCATCTATTCACTCGGAAGATAAAATTAAAATGCTACATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_1

Protein Analysis

317

Amino Acids

35.62

Weight (kDa)

9.31

Isoelectric Point (pI)

22.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_1 PF00561 61 - 293 7.8e-23 alpha/beta hydrolase fold
Abhydrolase_6 PF12697 63 - 295 2.8e-15 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011037)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G18360 AT2G18360 AT4G36610
fragaria_vesca FvH4_1g13190 FvH4_1g13200
malus_domestica MD02G1146700.v1.1 MD15G1260700.v1.1
prunus_persica Prupe.7G155500_v2.0.a1
pyrus_communis pycom02g11600 pycom15g22790
rosa_chinensis RchiOBHm_Chr2g0101411
rosa_laevigata RLG00000017076
rosa_multiflora Rmu_sc0006128.1_g000006
rosa_roxburghii Rroxscaffold_2G00141330
rosa_rugosa Rorug02G0098400
rosa_samantha Rh2AG146700 Rh2BG152100 Rh2CG152600 Rh2DG152200
rosa_wichuraiana Rw2G011440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 350
Acc65I GGTACC 1 cut(s) 143
AccB1I GGYRCC 1 cut(s) 143
AccI GTMKAC 1 cut(s) 270
AclWI GGATC 3 cut(s) 294, 307, 555
AcsI RAATTY 1 cut(s) 136
AcuI CTGAAG 1 cut(s) 456
AcyI GRCGYC 2 cut(s) 60, 895
AfaI GTAC 4 cut(s) 21, 38, 145, 864
AfiI CCNNNNNNNGG 3 cut(s) 328, 376, 451
AflII CTTAAG 1 cut(s) 578
AgeI ACCGGT 2 cut(s) 321, 522
AgsI TTSAA 4 cut(s) 338, 427, 520, 637
AjiI CACGTC 1 cut(s) 228
AjnI CCWGG 1 cut(s) 88
AluBI AGCT 4 cut(s) 405, 440, 516, 680
AluI AGCT 4 cut(s) 405, 440, 516, 680
Alw26I GTCTC 3 cut(s) 330, 792, 902
AlwI GGATC 3 cut(s) 294, 307, 555
AoxI GGCC 1 cut(s) 853
ApoI RAATTY 1 cut(s) 136
AseI ATTAAT 1 cut(s) 504
AsiGI ACCGGT 2 cut(s) 321, 522
Asp718I GGTACC 1 cut(s) 143
AspLEI GCGC 1 cut(s) 721
AspS9I GGNCC 3 cut(s) 112, 280, 319
AsuC2I CCSGG 1 cut(s) 446
AsuHPI GGTGA 4 cut(s) 16, 583, 773, 830
AvaII GGWCC 3 cut(s) 112, 280, 319
AxyI CCTNAGG 1 cut(s) 117
BamHI GGATCC 1 cut(s) 299
BanI GGYRCC 1 cut(s) 143
BciT130I CCWGG 1 cut(s) 90
BciVI GTATCC 1 cut(s) 377
BclI TGATCA 1 cut(s) 769
BcnI CCSGG 1 cut(s) 446
BcoDI GTCTC 3 cut(s) 330, 792, 902
BfaI CTAG 1 cut(s) 795
BfrI CTTAAG 1 cut(s) 578
BfuI GTATCC 1 cut(s) 377
Bme1390I CCNGG 2 cut(s) 90, 446
Bme18I GGWCC 3 cut(s) 112, 280, 319
BmgBI CACGTC 1 cut(s) 228
BmgT120I GGNCC 3 cut(s) 112, 280, 319
BmiI GGNNCC 5 cut(s) 113, 114, 145, 301, 620
BmrFI CCNGG 2 cut(s) 90, 446
BmsI GCATC 1 cut(s) 923
BpuMI CCSGG 1 cut(s) 446
BsaHI GRCGYC 2 cut(s) 60, 895
BsaI GGTCTC 1 cut(s) 330
BsaJI CCNNGG 5 cut(s) 89, 199, 370, 543, 737
BsaWI WCCGGW 5 cut(s) 140, 146, 277, 321, 522
BsaXI ACNNNNNCTCC 2 cut(s) 267, 297
Bsc4I CCNNNNNNNGG 3 cut(s) 328, 376, 451
Bse118I RCCGGY 2 cut(s) 321, 522
Bse21I CCTNAGG 1 cut(s) 117
Bse3DI GCAATG 1 cut(s) 594
BseBI CCWGG 1 cut(s) 90
BseDI CCNNGG 5 cut(s) 89, 199, 370, 543, 737
BseLI CCNNNNNNNGG 3 cut(s) 328, 376, 451
BseMI GCAATG 1 cut(s) 594
BseRI GAGGAG 1 cut(s) 275
BshFI GGCC 1 cut(s) 855
BshNI GGYRCC 1 cut(s) 143
BshTI ACCGGT 2 cut(s) 321, 522
BsiSI CCGG 7 cut(s) 141, 147, 278, 322, 329, 446, 523
BslFI GGGAC 3 cut(s) 98, 106, 588
BslI CCNNNNNNNGG 3 cut(s) 328, 376, 451
BsmAI GTCTC 3 cut(s) 330, 792, 902
BsmBI CGTCTC 1 cut(s) 902
BsmFI GGGAC 3 cut(s) 98, 106, 588
BsnI GGCC 1 cut(s) 855
Bso31I GGTCTC 1 cut(s) 330
Bsp143I GATC 7 cut(s) 81, 99, 299, 429, 547, 769, 781
Bsp19I CCATGG 1 cut(s) 199
BspANI GGCC 1 cut(s) 855
BspLI GGNNCC 5 cut(s) 113, 114, 145, 301, 620
BspPI GGATC 3 cut(s) 294, 307, 555
BspT107I GGYRCC 1 cut(s) 143
BspTI CTTAAG 1 cut(s) 578
BspTNI GGTCTC 1 cut(s) 330
BsrDI GCAATG 1 cut(s) 594
BsrFI RCCGGY 2 cut(s) 321, 522
BssAI RCCGGY 2 cut(s) 321, 522
BssECI CCNNGG 5 cut(s) 89, 199, 370, 543, 737
BssMI GATC 7 cut(s) 81, 99, 299, 429, 547, 769, 781
BssNI GRCGYC 2 cut(s) 60, 895
BssT1I CCWWGG 1 cut(s) 199
Bst2UI CCWGG 1 cut(s) 90
Bst4CI ACNGT 3 cut(s) 41, 347, 687
Bst6I CTCTTC 1 cut(s) 593
BstACI GRCGYC 2 cut(s) 60, 895
BstAFI CTTAAG 1 cut(s) 578
BstC8I GCNNGC 4 cut(s) 58, 211, 514, 853
BstDEI CTNAG 1 cut(s) 117
BstDSI CCRYGG 3 cut(s) 199, 543, 737
BstHHI GCGC 1 cut(s) 721
BstKTI GATC 7 cut(s) 84, 102, 302, 432, 550, 772, 784
BstMAI GTCTC 3 cut(s) 330, 792, 902
BstMBI GATC 7 cut(s) 81, 99, 299, 429, 547, 769, 781
BstMWI GCNNNNNNNGC 2 cut(s) 338, 411
BstNI CCWGG 1 cut(s) 90
BstSCI CCNGG 2 cut(s) 88, 444
BstX2I RGATCY 2 cut(s) 299, 547
BstYI RGATCY 2 cut(s) 299, 547
Bsu36I CCTNAGG 1 cut(s) 117
BsuI GTATCC 1 cut(s) 377
BsuRI GGCC 1 cut(s) 855
BtgI CCRYGG 3 cut(s) 199, 543, 737
BtrI CACGTC 1 cut(s) 228
Cac8I GCNNGC 4 cut(s) 58, 211, 514, 853
CfoI GCGC 1 cut(s) 721
Cfr10I RCCGGY 2 cut(s) 321, 522
Cfr13I GGNCC 3 cut(s) 112, 280, 319
CpoI CGGWCCG 1 cut(s) 319
CseI GACGC 2 cut(s) 49, 884
Csp6I GTAC 4 cut(s) 20, 37, 144, 863
CspAI ACCGGT 2 cut(s) 321, 522
CspI CGGWCCG 1 cut(s) 319
CviAII CATG 4 cut(s) 200, 415, 451, 802
CviQI GTAC 4 cut(s) 20, 37, 144, 863
DdeI CTNAG 1 cut(s) 117
DpnI GATC 7 cut(s) 83, 101, 301, 431, 549, 771, 783
DpnII GATC 7 cut(s) 81, 99, 299, 429, 547, 769, 781
DrdI GACNNNNNNGTC 1 cut(s) 350
DseDI GACNNNNNNGTC 1 cut(s) 350
Eam1104I CTCTTC 1 cut(s) 593
EarI CTCTTC 1 cut(s) 593
Eco130I CCWWGG 1 cut(s) 199
Eco31I GGTCTC 1 cut(s) 330
Eco47I GGWCC 3 cut(s) 112, 280, 319
Eco57I CTGAAG 1 cut(s) 456
Eco81I CCTNAGG 1 cut(s) 117
EcoO109I RGGNCCY 1 cut(s) 112
EcoRI GAATTC 1 cut(s) 136
EcoRII CCWGG 1 cut(s) 88
EcoT14I CCWWGG 1 cut(s) 199
ErhI CCWWGG 1 cut(s) 199
Esp3I CGTCTC 1 cut(s) 902
FaeI CATG 4 cut(s) 203, 418, 454, 805
FaiI YATR 7 cut(s) 201, 275, 416, 452, 606, 803, 842
FalI AAGNNNNNCTT 4 cut(s) 89, 121, 572, 604
FaqI GGGAC 3 cut(s) 98, 106, 588
FatI CATG 4 cut(s) 199, 414, 450, 801
FbaI TGATCA 1 cut(s) 769
FblI GTMKAC 1 cut(s) 270
FspBI CTAG 1 cut(s) 795
GlaI GCGC 1 cut(s) 720
HaeIII GGCC 1 cut(s) 855
HapII CCGG 7 cut(s) 141, 147, 278, 322, 329, 446, 523
HgaI GACGC 2 cut(s) 49, 884
HhaI GCGC 1 cut(s) 721
Hin1I GRCGYC 2 cut(s) 60, 895
Hin1II CATG 4 cut(s) 203, 418, 454, 805
Hin6I GCGC 1 cut(s) 719
HinP1I GCGC 1 cut(s) 719
HindIII AAGCTT 1 cut(s) 438
HinfI GANTC 2 cut(s) 219, 481
HpaII CCGG 7 cut(s) 141, 147, 278, 322, 329, 446, 523
HphI GGTGA 4 cut(s) 16, 583, 773, 830
Hpy166II GTNNAC 3 cut(s) 7, 271, 886
Hpy188I TCNGA 3 cut(s) 45, 319, 928
Hpy188III TCNNGA 3 cut(s) 223, 427, 785
Hpy8I GTNNAC 3 cut(s) 7, 271, 886
Hpy99I CGWCG 1 cut(s) 65
HpyAV CCTTC 2 cut(s) 209, 841
HpyCH4III ACNGT 3 cut(s) 41, 347, 687
HpyCH4IV ACGT 1 cut(s) 227
HpyCH4V TGCA 3 cut(s) 248, 604, 914
HpyF10VI GCNNNNNNNGC 2 cut(s) 338, 411
HpyF3I CTNAG 1 cut(s) 117
HpySE526I ACGT 1 cut(s) 227
Hsp92I GRCGYC 2 cut(s) 60, 895
Hsp92II CATG 4 cut(s) 203, 418, 454, 805
HspAI GCGC 1 cut(s) 719
KflI GGGWCCC 1 cut(s) 112
KpnI GGTACC 1 cut(s) 147
Ksp22I TGATCA 1 cut(s) 769
Kzo9I GATC 7 cut(s) 81, 99, 299, 429, 547, 769, 781
LweI GCATC 1 cut(s) 923
MaeI CTAG 1 cut(s) 795
MaeII ACGT 1 cut(s) 227
MaeIII GTNAC 3 cut(s) 223, 555, 568
MalI GATC 7 cut(s) 83, 101, 301, 431, 549, 771, 783
MboI GATC 7 cut(s) 81, 99, 299, 429, 547, 769, 781
MboII GAAGA 5 cut(s) 109, 145, 531, 580, 941
MfeI CAATTG 1 cut(s) 866
MflI RGATCY 2 cut(s) 299, 547
MluCI AATT 4 cut(s) 136, 788, 866, 936
MnlI CCTC 8 cut(s) 10, 293, 296, 380, 502, 643, 685, 738
MseI TTAA 6 cut(s) 194, 504, 579, 660, 939, 952
MslI CAYNNNNRTG 1 cut(s) 599
MspCI CTTAAG 1 cut(s) 578
MspI CCGG 7 cut(s) 141, 147, 278, 322, 329, 446, 523
MspR9I CCNGG 2 cut(s) 90, 446
MunI CAATTG 1 cut(s) 866
MvaI CCWGG 1 cut(s) 90
MwoI GCNNNNNNNGC 2 cut(s) 338, 411
NciI CCSGG 1 cut(s) 446
NcoI CCATGG 1 cut(s) 199
NdeII GATC 7 cut(s) 81, 99, 299, 429, 547, 769, 781
NlaIII CATG 4 cut(s) 203, 418, 454, 805
NlaIV GGNNCC 5 cut(s) 113, 114, 145, 301, 620
NmeAIII GCCGAG 1 cut(s) 351
NmuCI GTSAC 1 cut(s) 223
PfeI GAWTC 2 cut(s) 219, 481
PinAI ACCGGT 2 cut(s) 321, 522
PpuMI RGGWCCY 1 cut(s) 112
PshBI ATTAAT 1 cut(s) 504
Psp5II RGGWCCY 1 cut(s) 112
Psp6I CCWGG 1 cut(s) 88
PspGI CCWGG 1 cut(s) 88
PspN4I GGNNCC 5 cut(s) 113, 114, 145, 301, 620
PspPI GGNCC 3 cut(s) 112, 280, 319
PspPPI RGGWCCY 1 cut(s) 112
PsuI RGATCY 2 cut(s) 299, 547
RsaI GTAC 4 cut(s) 21, 38, 145, 864
RsaNI GTAC 4 cut(s) 20, 37, 144, 863
RseI CAYNNNNRTG 1 cut(s) 599
Rsr2I CGGWCCG 1 cut(s) 319
RsrII CGGWCCG 1 cut(s) 319
SaqAI TTAA 6 cut(s) 194, 504, 579, 660, 939, 952
Sau3AI GATC 7 cut(s) 81, 99, 299, 429, 547, 769, 781
Sau96I GGNCC 3 cut(s) 112, 280, 319
ScrFI CCNGG 2 cut(s) 90, 446
SfaNI GCATC 1 cut(s) 923
SinI GGWCC 3 cut(s) 112, 280, 319
SmiMI CAYNNNNRTG 1 cut(s) 599
SmlI CTYRAG 1 cut(s) 578
SmoI CTYRAG 1 cut(s) 578
Sse9I AATT 4 cut(s) 136, 788, 866, 936
SspMI CTAG 1 cut(s) 795
StyD4I CCNGG 2 cut(s) 88, 444
StyI CCWWGG 1 cut(s) 199
TaaI ACNGT 3 cut(s) 41, 347, 687
TaiI ACGT 1 cut(s) 230
TaqI TCGA 4 cut(s) 84, 479, 648, 786
TaqII GACCGA 2 cut(s) 256, 509
TasI AATT 4 cut(s) 136, 788, 866, 936
TfiI GAWTC 2 cut(s) 219, 481
Tru1I TTAA 6 cut(s) 194, 504, 579, 660, 939, 952
Tru9I TTAA 6 cut(s) 194, 504, 579, 660, 939, 952
TseFI GTSAC 1 cut(s) 223
Tsp45I GTSAC 1 cut(s) 223
TspDTI ATGAA 2 cut(s) 62, 818
TspGWI ACGGA 2 cut(s) 560, 754
Vha464I CTTAAG 1 cut(s) 578
VpaK11BI GGWCC 3 cut(s) 112, 280, 319
VspI ATTAAT 1 cut(s) 504
XapI RAATTY 1 cut(s) 136
XcmI CCANNNNNNNNNTGG 1 cut(s) 206
XmiI GTMKAC 1 cut(s) 270
XspI CTAG 1 cut(s) 795
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.