Rorug02G0098400

epoxide hydrolase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
8199864 .. 8200052
189 bp
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UTR
Exon/CDS
Intron
Rorug02G0098400.1

Sequence Viewer

Length: 189 bp
ATGATGAGAACCGTAGGGAACGAGAGAGCTGAGGCTGACGATGCCTCCGAGGCTTGGGATGGCGACGCGGCGAGAGTAGAAAAGGTCAGGCAACACGACGCCGACTCTGGAGACGGCGATGGGGGTCAGTGGAAAGGCGGAAAGCGCTGGATGGGAGGAGCGTGGGGAGGATGGAGCGGGAGGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

62

Amino Acids

6.74

Weight (kDa)

5.2

Isoelectric Point (pI)

42.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011037)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 177
AccII CGCG 1 cut(s) 68
AciI CCGC 3 cut(s) 68, 138, 177
AcyI GRCGYC 1 cut(s) 99
AfeI AGCGCT 1 cut(s) 146
AfiI CCNNNNNNNGG 1 cut(s) 54
AluBI AGCT 1 cut(s) 29
AluI AGCT 1 cut(s) 29
Alw26I GTCTC 1 cut(s) 105
Aor51HI AGCGCT 1 cut(s) 146
AspLEI GCGC 1 cut(s) 147
BbvCI CCTCAGC 1 cut(s) 30
BccI CCATC 4 cut(s) 53, 113, 145, 165
BceAI ACGGC 1 cut(s) 130
BcoDI GTCTC 1 cut(s) 105
BfoI RGCGCY 1 cut(s) 148
BglI GCCNNNNNGGC 1 cut(s) 50
BisI GCNGC 1 cut(s) 69
BlsI GCNGC 1 cut(s) 70
BmsI GCATC 1 cut(s) 31
BpmI CTGGAG 1 cut(s) 129
Bpu10I CCTNAGC 1 cut(s) 30
BsaHI GRCGYC 1 cut(s) 99
BsaJI CCNNGG 1 cut(s) 48
BsaXI ACNNNNNCTCC 2 cut(s) 29, 59
Bsc4I CCNNNNNNNGG 1 cut(s) 54
BseDI CCNNGG 1 cut(s) 48
BseGI GGATG 3 cut(s) 64, 156, 176
BseLI CCNNNNNNNGG 1 cut(s) 54
BseMII CTCAG 1 cut(s) 21
BseRI GAGGAG 1 cut(s) 171
Bsh1236I CGCG 1 cut(s) 68
BslI CCNNNNNNNGG 1 cut(s) 54
BsmAI GTCTC 1 cut(s) 105
BsmBI CGTCTC 1 cut(s) 105
BspACI CCGC 3 cut(s) 68, 138, 177
BspCNI CTCAG 1 cut(s) 22
BspFNI CGCG 1 cut(s) 68
BsrBI CCGCTC 1 cut(s) 177
BssECI CCNNGG 1 cut(s) 48
BssNI GRCGYC 1 cut(s) 99
Bst4CI ACNGT 1 cut(s) 13
BstACI GRCGYC 1 cut(s) 99
BstDEI CTNAG 1 cut(s) 30
BstF5I GGATG 3 cut(s) 64, 156, 176
BstFNI CGCG 1 cut(s) 68
BstH2I RGCGCY 1 cut(s) 148
BstHHI GCGC 1 cut(s) 147
BstMAI GTCTC 1 cut(s) 105
BstMWI GCNNNNNNNGC 3 cut(s) 41, 50, 144
BstUI CGCG 1 cut(s) 68
BtgZI GCGATG 1 cut(s) 132
BtsCI GGATG 3 cut(s) 64, 156, 176
BtsIMutI CAGTG 1 cut(s) 134
CfoI GCGC 1 cut(s) 147
CseI GACGC 2 cut(s) 74, 107
CviJI RGCY 3 cut(s) 29, 35, 53
CviKI_1 RGCY 3 cut(s) 29, 35, 53
DdeI CTNAG 1 cut(s) 30
EciI GGCGGA 1 cut(s) 153
Eco47III AGCGCT 1 cut(s) 146
Esp3I CGTCTC 1 cut(s) 105
FauI CCCGC 1 cut(s) 170
Fnu4HI GCNGC 1 cut(s) 69
FokI GGATG 3 cut(s) 71, 163, 183
Fsp4HI GCNGC 1 cut(s) 69
GlaI GCGC 1 cut(s) 146
GluI GCNGC 1 cut(s) 69
GsuI CTGGAG 1 cut(s) 129
HaeII RGCGCY 1 cut(s) 148
HgaI GACGC 2 cut(s) 74, 107
HhaI GCGC 1 cut(s) 147
Hin1I GRCGYC 1 cut(s) 99
Hin6I GCGC 1 cut(s) 145
HinP1I GCGC 1 cut(s) 145
HinfI GANTC 1 cut(s) 104
Hpy188I TCNGA 1 cut(s) 49
Hpy188III TCNNGA 1 cut(s) 108
Hpy99I CGWCG 2 cut(s) 68, 101
HpyCH4III ACNGT 1 cut(s) 13
HpyF10VI GCNNNNNNNGC 3 cut(s) 41, 50, 144
HpyF3I CTNAG 1 cut(s) 30
Hsp92I GRCGYC 1 cut(s) 99
HspAI GCGC 1 cut(s) 145
LmnI GCTCC 2 cut(s) 158, 174
LpnPI CCDG 3 cut(s) 73, 93, 133
LweI GCATC 1 cut(s) 31
MbiI CCGCTC 1 cut(s) 177
MlyI GAGTC 1 cut(s) 98
MnlI CCTC 6 cut(s) 25, 43, 55, 149, 161, 174
MvnI CGCG 1 cut(s) 68
MwoI GCNNNNNNNGC 3 cut(s) 41, 50, 144
PcsI WCGNNNNNNNCGW 1 cut(s) 45
PkrI GCNGC 1 cut(s) 70
PleI GAGTC 1 cut(s) 98
PpsI GAGTC 1 cut(s) 98
SatI GCNGC 1 cut(s) 69
SchI GAGTC 1 cut(s) 98
SetI ASST 2 cut(s) 31, 87
SfaNI GCATC 1 cut(s) 31
SsiI CCGC 3 cut(s) 68, 138, 177
TaaI ACNGT 1 cut(s) 13
TauI GCSGC 1 cut(s) 71
TscAI CASTG 1 cut(s) 134
TspRI CASTG 1 cut(s) 134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.