Prupe.7G155500_v2.0.a1

epoxide hydrolase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0011037
Physical Location & Seq
Forward (+)
16457678 .. 16460176
2499 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G155500.1

Sequence Viewer

Length: 948 bp
ATGGTGAACTTGGTAGCGCTGCAGAGACCCTTACTGCATGGGCTCATGAAAATGGCAGGGGTGCGGCCGTACACGGTGGAGCTCGAACCTGGCACGGCCATGAACTTCTGGGTTCCAAATGAGACCCTCGACAAGCCCAAGAAGGGCCAGAAGCCCACCGTCAAGGCCAGCCCAACAAAGCCCGTCGTGGTCCTCGTGCACGGCTTCGCAGCCGAGGGGATTGTCACGTGGCAGTTTCAGATTGGCGCGTTGAGCAAAAAGTACTCAGTCTACGTTCCGGACCTCCTCTTCTTCGGCGGCTCCGCCACCGATAAGGCGGACCGATCACCGACTCTGCAGGCGGAATGTTTGGCTGCGGGGTTGAGGAAGCTCGGGGTGGAGAGGTGCACGGTGGTTGGGTTTAGCTACGGCGGGATGGTGGGGTTCAAATTGGCCGAGCTGTACCCGGACATGGTTCGAGCCCTGGTGGTTTCCGGCTCGATCTTGGCTATGACTTGCTCGGTCAGCGACGAGACCATGGAGAGGCTTGGGTGTGGGAATTCTTCGGAGCTTCTGCTGCCCAGCTCGGTGAAGGGGCTCAAGAACTTGCTCTCTATTGCTGCTCATAAGAAGCTTTATTTTCCTGACCGGCTCCACAAGGACTTCCTCGAGGTGATGTTCACCAACAGGAAGGAGAGAGAAGAACTCCTTGAAGGTTTAGTCATTGATACCAAGGACCCAACAATCCCCAAATTCCCACAGAGAATACATCTGTTGTGGGGTGAAAATGATCAGATATTTCAGCGGGAGCTTGCCCACAACATGAAAGAGCAACTAGGAGAAAATGCAACATTTGAAGGCATAAAGAAGGCAGGTCACTTGGTCCACCTGGAAAGACCCTGTGTTTACAATAGATGTCTCAAGCGATTCCTTGCTTCCCTCCCCCATGAAGATGGAGCTCAGAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_1

Protein Analysis

316

Amino Acids

35.02

Weight (kDa)

8.9

Isoelectric Point (pI)

25.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011037)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G18360 AT2G18360 AT4G36610
fragaria_vesca FvH4_1g13190 FvH4_1g13200
malus_domestica MD02G1146700.v1.1 MD15G1260700.v1.1
prunus_persica Prupe.7G155500_v2.0.a1
pyrus_communis pycom02g11600 pycom15g22790
rosa_chinensis RchiOBHm_Chr2g0101411
rosa_laevigata RLG00000017076
rosa_multiflora Rmu_sc0006128.1_g000006
rosa_roxburghii Rroxscaffold_2G00141330
rosa_rugosa Rorug02G0098400
rosa_samantha Rh2AG146700 Rh2BG152100 Rh2CG152600 Rh2DG152200
rosa_wichuraiana Rw2G011440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 647
Acc36I ACCTGC 1 cut(s) 842
AccI GTMKAC 1 cut(s) 270
AccII CGCG 1 cut(s) 248
AccIII TCCGGA 1 cut(s) 277
AciI CCGC 8 cut(s) 64, 297, 303, 317, 341, 356, 411, 784
AcoI YGGCCR 3 cut(s) 65, 96, 432
AcsI RAATTY 2 cut(s) 538, 731
AcvI CACGTG 1 cut(s) 228
AfaI GTAC 3 cut(s) 71, 263, 443
AfeI AGCGCT 1 cut(s) 18
AfiI CCNNNNNNNGG 3 cut(s) 143, 451, 522
AgsI TTSAA 3 cut(s) 427, 692, 836
AjnI CCWGG 3 cut(s) 88, 462, 867
AluBI AGCT 9 cut(s) 82, 370, 405, 439, 550, 564, 613, 790, 938
AluI AGCT 9 cut(s) 82, 370, 405, 439, 550, 564, 613, 790, 938
Alw21I GWGCWC 4 cut(s) 84, 201, 389, 940
Alw26I GTCTC 4 cut(s) 19, 116, 506, 902
Alw44I GTGCAC 2 cut(s) 197, 385
Ama87I CYCGRG 2 cut(s) 371, 647
Aor13HI TCCGGA 1 cut(s) 277
Aor51HI AGCGCT 1 cut(s) 18
AoxI GGCC 5 cut(s) 65, 96, 145, 165, 432
ApaLI GTGCAC 2 cut(s) 197, 385
ApeKI GCWGC 5 cut(s) 19, 209, 353, 556, 599
ApoI RAATTY 2 cut(s) 538, 731
AspLEI GCGC 2 cut(s) 19, 248
AspS9I GGNCC 6 cut(s) 145, 190, 280, 319, 715, 862
AsuC2I CCSGG 1 cut(s) 446
AsuHPI GGTGA 6 cut(s) 16, 318, 580, 652, 664, 773
AvaI CYCGRG 2 cut(s) 371, 647
AvaII GGWCC 5 cut(s) 190, 280, 319, 715, 862
BaeGI GKGCMC 2 cut(s) 201, 389
BanII GRGCYC 5 cut(s) 45, 84, 463, 579, 940
BauI CACGAG 1 cut(s) 194
BbrPI CACGTG 1 cut(s) 228
Bbv12I GWGCWC 4 cut(s) 84, 201, 389, 940
BbvI GCAGC 5 cut(s) 6, 221, 340, 543, 586
BccI CCATC 2 cut(s) 409, 926
BceAI ACGGC 4 cut(s) 52, 111, 217, 424
BciT130I CCWGG 3 cut(s) 90, 464, 869
BclI TGATCA 1 cut(s) 769
BcnI CCSGG 1 cut(s) 446
BcoDI GTCTC 4 cut(s) 19, 116, 506, 902
BfaI CTAG 1 cut(s) 815
BfmI CTRYAG 2 cut(s) 20, 335
BfoI RGCGCY 1 cut(s) 20
BfuAI ACCTGC 1 cut(s) 842
BisI GCNGC 7 cut(s) 20, 65, 210, 298, 354, 557, 600
BlsI GCNGC 7 cut(s) 21, 66, 211, 299, 355, 558, 601
BmcAI AGTACT 1 cut(s) 263
Bme1390I CCNGG 4 cut(s) 90, 446, 464, 869
Bme18I GGWCC 5 cut(s) 190, 280, 319, 715, 862
BmeT110I CYCGRG 2 cut(s) 371, 647
BmgT120I GGNCC 6 cut(s) 145, 190, 280, 319, 715, 862
BmiI GGNNCC 4 cut(s) 114, 301, 632, 717
BmrFI CCNGG 4 cut(s) 90, 446, 464, 869
BplI GAGNNNNNCTC 2 cut(s) 669, 701
BpuEI CTTGAG 2 cut(s) 563, 884
BpuMI CCSGG 1 cut(s) 446
BsaAI YACGTR 1 cut(s) 228
BsaI GGTCTC 3 cut(s) 19, 116, 506
BsaJI CCNNGG 4 cut(s) 213, 462, 516, 711
BsaWI WCCGGW 1 cut(s) 277
Bsc4I CCNNNNNNNGG 3 cut(s) 143, 451, 522
Bse118I RCCGGY 1 cut(s) 627
BseAI TCCGGA 1 cut(s) 277
BseBI CCWGG 3 cut(s) 90, 464, 869
BseDI CCNNGG 4 cut(s) 213, 462, 516, 711
BseGI GGATG 1 cut(s) 420
BseLI CCNNNNNNNGG 3 cut(s) 143, 451, 522
BseMII CTCAG 1 cut(s) 279
BseRI GAGGAG 1 cut(s) 275
BseSI GKGCMC 2 cut(s) 201, 389
BseX3I CGGCCG 1 cut(s) 65
BseXI GCAGC 5 cut(s) 6, 221, 340, 543, 586
BseYI CCCAGC 1 cut(s) 560
Bsh1236I CGCG 1 cut(s) 248
Bsh1285I CGRYCG 1 cut(s) 68
BshFI GGCC 5 cut(s) 67, 98, 147, 167, 434
BsiEI CGRYCG 1 cut(s) 68
BsiHKAI GWGCWC 4 cut(s) 84, 201, 389, 940
BsiHKCI CYCGRG 2 cut(s) 371, 647
BsiSI CCGG 4 cut(s) 278, 446, 474, 628
BslI CCNNNNNNNGG 3 cut(s) 143, 451, 522
BsmAI GTCTC 4 cut(s) 19, 116, 506, 902
BsnI GGCC 5 cut(s) 67, 98, 147, 167, 434
Bso31I GGTCTC 3 cut(s) 19, 116, 506
BsoBI CYCGRG 2 cut(s) 371, 647
Bsp1286I GDGCHC 7 cut(s) 45, 84, 201, 389, 463, 579, 940
Bsp13I TCCGGA 1 cut(s) 277
Bsp143I GATC 3 cut(s) 323, 480, 769
Bsp19I CCATGG 1 cut(s) 516
BspACI CCGC 8 cut(s) 64, 297, 303, 317, 341, 356, 411, 784
BspANI GGCC 5 cut(s) 67, 98, 147, 167, 434
BspCNI CTCAG 1 cut(s) 278
BspEI TCCGGA 1 cut(s) 277
BspFNI CGCG 1 cut(s) 248
BspHI TCATGA 1 cut(s) 45
BspLI GGNNCC 4 cut(s) 114, 301, 632, 717
BspMAI CTGCAG 2 cut(s) 24, 339
BspMI ACCTGC 1 cut(s) 842
BspTNI GGTCTC 3 cut(s) 19, 116, 506
BsrFI RCCGGY 1 cut(s) 627
BssAI RCCGGY 1 cut(s) 627
BssECI CCNNGG 4 cut(s) 213, 462, 516, 711
BssMI GATC 3 cut(s) 323, 480, 769
BssSI CACGAG 1 cut(s) 194
BssT1I CCWWGG 2 cut(s) 516, 711
Bst2BI CACGAG 1 cut(s) 194
Bst2UI CCWGG 3 cut(s) 90, 464, 869
Bst4CI ACNGT 3 cut(s) 76, 160, 391
Bst6I CTCTTC 1 cut(s) 293
BstBAI YACGTR 1 cut(s) 228
BstC8I GCNNGC 3 cut(s) 169, 339, 792
BstDEI CTNAG 2 cut(s) 265, 939
BstDSI CCRYGG 1 cut(s) 516
BstF5I GGATG 1 cut(s) 420
BstFNI CGCG 1 cut(s) 248
BstH2I RGCGCY 1 cut(s) 20
BstHHI GCGC 2 cut(s) 19, 248
BstKTI GATC 3 cut(s) 326, 483, 772
BstMAI GTCTC 4 cut(s) 19, 116, 506, 902
BstMBI GATC 3 cut(s) 323, 480, 769
BstMCI CGRYCG 1 cut(s) 68
BstMWI GCNNNNNNNGC 3 cut(s) 252, 504, 556
BstNI CCWGG 3 cut(s) 90, 464, 869
BstSCI CCNGG 4 cut(s) 88, 444, 462, 867
BstSFI CTRYAG 2 cut(s) 20, 335
BstSLI GKGCMC 2 cut(s) 201, 389
BstUI CGCG 1 cut(s) 248
BstV1I GCAGC 5 cut(s) 6, 221, 340, 543, 586
BstXI CCANNNNNNTGG 1 cut(s) 932
BstZI CGGCCG 1 cut(s) 65
BsuRI GGCC 5 cut(s) 67, 98, 147, 167, 434
BtgI CCRYGG 1 cut(s) 516
BtsCI GGATG 1 cut(s) 420
BveI ACCTGC 1 cut(s) 842
Cac8I GCNNGC 3 cut(s) 169, 339, 792
CciI TCATGA 1 cut(s) 45
CfoI GCGC 2 cut(s) 19, 248
Cfr10I RCCGGY 1 cut(s) 627
Cfr13I GGNCC 6 cut(s) 145, 190, 280, 319, 715, 862
CpoI CGGWCCG 1 cut(s) 319
Csp6I GTAC 3 cut(s) 70, 262, 442
CspI CGGWCCG 1 cut(s) 319
CviAII CATG 7 cut(s) 38, 46, 100, 451, 517, 802, 926
CviQI GTAC 3 cut(s) 70, 262, 442
DdeI CTNAG 2 cut(s) 265, 939
DpnI GATC 3 cut(s) 325, 482, 771
DpnII GATC 3 cut(s) 323, 480, 769
EaeI YGGCCR 3 cut(s) 65, 96, 432
EagI CGGCCG 1 cut(s) 65
Eam1104I CTCTTC 1 cut(s) 293
EarI CTCTTC 1 cut(s) 293
EciI GGCGGA 3 cut(s) 292, 332, 356
Ecl136II GAGCTC 2 cut(s) 82, 938
EclXI CGGCCG 1 cut(s) 65
Eco130I CCWWGG 2 cut(s) 516, 711
Eco24I GRGCYC 5 cut(s) 45, 84, 463, 579, 940
Eco31I GGTCTC 3 cut(s) 19, 116, 506
Eco47I GGWCC 5 cut(s) 190, 280, 319, 715, 862
Eco47III AGCGCT 1 cut(s) 18
Eco52I CGGCCG 1 cut(s) 65
Eco53kI GAGCTC 2 cut(s) 82, 938
Eco72I CACGTG 1 cut(s) 228
Eco88I CYCGRG 2 cut(s) 371, 647
EcoICRI GAGCTC 2 cut(s) 82, 938
EcoO109I RGGNCCY 1 cut(s) 715
EcoRI GAATTC 1 cut(s) 538
EcoRII CCWGG 3 cut(s) 88, 462, 867
EcoT14I CCWWGG 2 cut(s) 516, 711
EcoT38I GRGCYC 5 cut(s) 45, 84, 463, 579, 940
ErhI CCWWGG 2 cut(s) 516, 711
FaeI CATG 7 cut(s) 41, 49, 103, 454, 520, 805, 929
FalI AAGNNNNNCTT 2 cut(s) 672, 704
FatI CATG 7 cut(s) 37, 45, 99, 450, 516, 801, 925
FauI CCCGC 3 cut(s) 349, 404, 777
FbaI TGATCA 1 cut(s) 769
FblI GTMKAC 1 cut(s) 270
Fnu4HI GCNGC 7 cut(s) 20, 65, 210, 298, 354, 557, 600
FokI GGATG 1 cut(s) 427
FriOI GRGCYC 5 cut(s) 45, 84, 463, 579, 940
Fsp4HI GCNGC 7 cut(s) 20, 65, 210, 298, 354, 557, 600
FspBI CTAG 1 cut(s) 815
GlaI GCGC 2 cut(s) 18, 247
GluI GCNGC 7 cut(s) 20, 65, 210, 298, 354, 557, 600
GsaI CCCAGC 1 cut(s) 564
HaeII RGCGCY 1 cut(s) 20
HaeIII GGCC 5 cut(s) 67, 98, 147, 167, 434
HapII CCGG 4 cut(s) 278, 446, 474, 628
HhaI GCGC 2 cut(s) 19, 248
Hin1II CATG 7 cut(s) 41, 49, 103, 454, 520, 805, 929
Hin6I GCGC 2 cut(s) 17, 246
HinP1I GCGC 2 cut(s) 17, 246
HindIII AAGCTT 1 cut(s) 611
HinfI GANTC 2 cut(s) 331, 906
HpaII CCGG 4 cut(s) 278, 446, 474, 628
HphI GGTGA 6 cut(s) 16, 318, 580, 652, 664, 773
Hpy166II GTNNAC 8 cut(s) 7, 72, 199, 271, 387, 660, 865, 886
Hpy188I TCNGA 4 cut(s) 240, 547, 774, 942
Hpy188III TCNNGA 4 cut(s) 46, 278, 580, 623
Hpy8I GTNNAC 8 cut(s) 7, 72, 199, 271, 387, 660, 865, 886
Hpy99I CGWCG 2 cut(s) 188, 512
HpyAV CCTTC 6 cut(s) 136, 565, 664, 686, 830, 841
HpyCH4III ACNGT 3 cut(s) 76, 160, 391
HpyCH4IV ACGT 2 cut(s) 227, 273
HpyCH4V TGCA 6 cut(s) 22, 37, 199, 337, 387, 827
HpyF10VI GCNNNNNNNGC 3 cut(s) 252, 504, 556
HpyF3I CTNAG 2 cut(s) 265, 939
HpySE526I ACGT 2 cut(s) 227, 273
Hsp92II CATG 7 cut(s) 41, 49, 103, 454, 520, 805, 929
HspAI GCGC 2 cut(s) 17, 246
Kpn2I TCCGGA 1 cut(s) 277
Ksp22I TGATCA 1 cut(s) 769
Kzo9I GATC 3 cut(s) 323, 480, 769
LmnI GCTCC 6 cut(s) 79, 305, 547, 636, 787, 935
Lsp1109I GCAGC 5 cut(s) 6, 221, 340, 543, 586
MaeI CTAG 1 cut(s) 815
MaeII ACGT 2 cut(s) 227, 273
MaeIII GTNAC 2 cut(s) 223, 854
MalI GATC 3 cut(s) 325, 482, 771
MboI GATC 3 cut(s) 323, 480, 769
MboII GAAGA 5 cut(s) 280, 283, 534, 692, 941
MhlI GDGCHC 7 cut(s) 45, 84, 201, 389, 463, 579, 940
MluCI AATT 3 cut(s) 428, 538, 731
MlyI GAGTC 1 cut(s) 325
MroI TCCGGA 1 cut(s) 277
MslI CAYNNNNRTG 3 cut(s) 50, 98, 930
MspA1I CMGCKG 1 cut(s) 784
MspI CCGG 4 cut(s) 278, 446, 474, 628
MspR9I CCNGG 4 cut(s) 90, 446, 464, 869
MvaI CCWGG 3 cut(s) 90, 464, 869
MvnI CGCG 1 cut(s) 248
MwoI GCNNNNNNNGC 3 cut(s) 252, 504, 556
NciI CCSGG 1 cut(s) 446
NcoI CCATGG 1 cut(s) 516
NdeII GATC 3 cut(s) 323, 480, 769
NlaIII CATG 7 cut(s) 41, 49, 103, 454, 520, 805, 929
NlaIV GGNNCC 4 cut(s) 114, 301, 632, 717
NmeAIII GCCGAG 2 cut(s) 238, 460
NmuCI GTSAC 2 cut(s) 223, 854
PaeR7I CTCGAG 1 cut(s) 647
PagI TCATGA 1 cut(s) 45
PcsI WCGNNNNNNNCGW 1 cut(s) 192
PfeI GAWTC 1 cut(s) 906
PkrI GCNGC 7 cut(s) 21, 66, 211, 299, 355, 558, 601
PleI GAGTC 1 cut(s) 325
PmaCI CACGTG 1 cut(s) 228
PmlI CACGTG 1 cut(s) 228
PpsI GAGTC 1 cut(s) 325
Ppu21I YACGTR 1 cut(s) 228
PpuMI RGGWCCY 1 cut(s) 715
Psp124BI GAGCTC 2 cut(s) 84, 940
Psp5II RGGWCCY 1 cut(s) 715
Psp6I CCWGG 3 cut(s) 88, 462, 867
PspCI CACGTG 1 cut(s) 228
PspFI CCCAGC 1 cut(s) 560
PspGI CCWGG 3 cut(s) 88, 462, 867
PspN4I GGNNCC 4 cut(s) 114, 301, 632, 717
PspPI GGNCC 6 cut(s) 145, 190, 280, 319, 715, 862
PspPPI RGGWCCY 1 cut(s) 715
PspXI VCTCGAGB 1 cut(s) 647
PstI CTGCAG 2 cut(s) 24, 339
RsaI GTAC 3 cut(s) 71, 263, 443
RsaNI GTAC 3 cut(s) 70, 262, 442
RseI CAYNNNNRTG 3 cut(s) 50, 98, 930
Rsr2I CGGWCCG 1 cut(s) 319
RsrII CGGWCCG 1 cut(s) 319
SacI GAGCTC 2 cut(s) 84, 940
SatI GCNGC 7 cut(s) 20, 65, 210, 298, 354, 557, 600
Sau3AI GATC 3 cut(s) 323, 480, 769
Sau96I GGNCC 6 cut(s) 145, 190, 280, 319, 715, 862
ScaI AGTACT 1 cut(s) 263
SchI GAGTC 1 cut(s) 325
ScrFI CCNGG 4 cut(s) 90, 446, 464, 869
SduI GDGCHC 7 cut(s) 45, 84, 201, 389, 463, 579, 940
SfcI CTRYAG 2 cut(s) 20, 335
Sfr274I CTCGAG 1 cut(s) 647
SinI GGWCC 5 cut(s) 190, 280, 319, 715, 862
SlaI CTCGAG 1 cut(s) 647
SmiMI CAYNNNNRTG 3 cut(s) 50, 98, 930
SmlI CTYRAG 3 cut(s) 578, 647, 899
SmoI CTYRAG 3 cut(s) 578, 647, 899
Sse9I AATT 3 cut(s) 428, 538, 731
SsiI CCGC 8 cut(s) 64, 297, 303, 317, 341, 356, 411, 784
SspMI CTAG 1 cut(s) 815
SstI GAGCTC 2 cut(s) 84, 940
StyD4I CCNGG 4 cut(s) 88, 444, 462, 867
StyI CCWWGG 2 cut(s) 516, 711
TaaI ACNGT 3 cut(s) 76, 160, 391
TaiI ACGT 2 cut(s) 230, 276
TaqI TCGA 5 cut(s) 84, 129, 457, 479, 648
TaqII GACCGA 2 cut(s) 336, 490
TasI AATT 3 cut(s) 428, 538, 731
TatI WGTACW 1 cut(s) 261
TauI GCSGC 2 cut(s) 67, 300
TfiI GAWTC 1 cut(s) 906
TseFI GTSAC 2 cut(s) 223, 854
TseI GCWGC 5 cut(s) 19, 209, 353, 556, 599
Tsp45I GTSAC 2 cut(s) 223, 854
TspDTI ATGAA 4 cut(s) 62, 116, 818, 942
VneI GTGCAC 2 cut(s) 197, 385
VpaK11BI GGWCC 5 cut(s) 190, 280, 319, 715, 862
XapI RAATTY 2 cut(s) 538, 731
XhoI CTCGAG 1 cut(s) 647
XmiI GTMKAC 1 cut(s) 270
XspI CTAG 1 cut(s) 815
ZrmI AGTACT 1 cut(s) 263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.