cadmium zinc-transporting ATPase HMA1, chloroplastic
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G37270 |
| fragaria_vesca | FvH4_1g16780 FvH4_1g16780 FvH4_1g16780 |
| malus_domestica | MD02G1179100.v1.1 MD15G1288800.v1.1 |
| prunus_persica | Prupe.6G228900_v2.0.a1 |
| pyrus_communis | pycom02g14510 |
| rosa_chinensis | RchiOBHm_Chr2g0106681 |
| rosa_laevigata | RLG00000017530 |
| rosa_multiflora | Rmu_sc0004000.1_g000005 |
| rosa_roxburghii | Rroxscaffold_2G00136890 |
| rosa_rugosa | Rorug02G0137700 |
| rosa_samantha | Rh2AG188700 Rh2BG199900 Rh2CG193800 Rh2DG195000 |
| rosa_wichuraiana | Rw2G014840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2009 |
| Acc36I | ACCTGC | 2 cut(s) | 16, 2009 |
| Acc65I | GGTACC | 1 cut(s) | 1367 |
| AccB1I | GGYRCC | 3 cut(s) | 1367, 1419, 1511 |
| AccBSI | CCGCTC | 1 cut(s) | 2255 |
| AccI | GTMKAC | 2 cut(s) | 181, 1959 |
| AccII | CGCG | 1 cut(s) | 1751 |
| AclWI | GGATC | 5 cut(s) | 804, 817, 1198, 1569, 2351 |
| AcoI | YGGCCR | 4 cut(s) | 354, 1221, 1242, 2250 |
| AcsI | RAATTY | 1 cut(s) | 958 |
| AcuI | CTGAAG | 5 cut(s) | 446, 1049, 1668, 1734, 2247 |
| AdeI | CACNNNGTG | 2 cut(s) | 1235, 1552 |
| AfaI | GTAC | 6 cut(s) | 738, 1026, 1369, 1760, 2298, 2343 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 497, 1415, 1416, 1607, 1838 |
| AflIII | ACRYGT | 1 cut(s) | 1749 |
| AgeI | ACCGGT | 1 cut(s) | 2162 |
| AgsI | TTSAA | 9 cut(s) | 289, 637, 700, 1156, 1406, 1440, 1583, 1708, 1917 |
| AhlI | ACTAGT | 1 cut(s) | 668 |
| AjnI | CCWGG | 3 cut(s) | 943, 1600, 1837 |
| Alw21I | GWGCWC | 4 cut(s) | 795, 894, 1240, 1315 |
| Alw26I | GTCTC | 2 cut(s) | 462, 2145 |
| Alw44I | GTGCAC | 2 cut(s) | 791, 1311 |
| AlwI | GGATC | 5 cut(s) | 804, 817, 1198, 1569, 2351 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 719, 1646 |
| Ama87I | CYCGRG | 2 cut(s) | 81, 2010 |
| AoxI | GGCC | 8 cut(s) | 354, 1160, 1221, 1242, 1384, 1609, 1875, 2250 |
| ApaLI | GTGCAC | 2 cut(s) | 791, 1311 |
| ApoI | RAATTY | 1 cut(s) | 958 |
| AseI | ATTAAT | 1 cut(s) | 2052 |
| AsiGI | ACCGGT | 1 cut(s) | 2162 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 470, 1435, 1596 |
| Asp718I | GGTACC | 1 cut(s) | 1367 |
| AspA2I | CCTAGG | 1 cut(s) | 1138 |
| AspS9I | GGNCC | 3 cut(s) | 1142, 1875, 1906 |
| AsuHPI | GGTGA | 6 cut(s) | 191, 248, 845, 1221, 1808, 2152 |
| AsuII | TTCGAA | 1 cut(s) | 1590 |
| AvaI | CYCGRG | 2 cut(s) | 81, 2010 |
| AvaII | GGWCC | 2 cut(s) | 1142, 1906 |
| AvrII | CCTAGG | 1 cut(s) | 1138 |
| BaeGI | GKGCMC | 4 cut(s) | 795, 1315, 1422, 1514 |
| BalI | TGGCCA | 1 cut(s) | 356 |
| BamHI | GGATCC | 1 cut(s) | 809 |
| BanI | GGYRCC | 3 cut(s) | 1367, 1419, 1511 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 133, 165 |
| BbsI | GAAGAC | 1 cut(s) | 1746 |
| Bbv12I | GWGCWC | 4 cut(s) | 795, 894, 1240, 1315 |
| BbvCI | CCTCAGC | 1 cut(s) | 654 |
| BccI | CCATC | 8 cut(s) | 210, 255, 267, 336, 559, 959, 1065, 2368 |
| BceAI | ACGGC | 4 cut(s) | 404, 898, 1229, 2111 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1090, 1124, 2220, 2254 |
| BciT130I | CCWGG | 3 cut(s) | 945, 1602, 1839 |
| BclI | TGATCA | 1 cut(s) | 1795 |
| BcoDI | GTCTC | 2 cut(s) | 462, 2145 |
| BcuI | ACTAGT | 1 cut(s) | 668 |
| BfaI | CTAG | 6 cut(s) | 39, 626, 669, 1139, 1322, 2069 |
| BfmI | CTRYAG | 2 cut(s) | 846, 1683 |
| BfuAI | ACCTGC | 2 cut(s) | 16, 2009 |
| BlnI | CCTAGG | 1 cut(s) | 1138 |
| Bme1390I | CCNGG | 3 cut(s) | 945, 1602, 1839 |
| Bme18I | GGWCC | 2 cut(s) | 1142, 1906 |
| BmeT110I | CYCGRG | 2 cut(s) | 81, 2010 |
| BmgT120I | GGNCC | 3 cut(s) | 1142, 1875, 1906 |
| BmiI | GGNNCC | 6 cut(s) | 6, 811, 1369, 1421, 1513, 1907 |
| BmrFI | CCNGG | 3 cut(s) | 945, 1602, 1839 |
| BmrI | ACTGGG | 2 cut(s) | 909, 1911 |
| BmuI | ACTGGG | 2 cut(s) | 909, 1911 |
| BpiI | GAAGAC | 1 cut(s) | 1746 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 289, 321 |
| BpmI | CTGGAG | 3 cut(s) | 558, 951, 2046 |
| Bpu10I | CCTNAGC | 1 cut(s) | 654 |
| Bpu14I | TTCGAA | 1 cut(s) | 1590 |
| Bsa29I | ATCGAT | 1 cut(s) | 2240 |
| BsaAI | YACGTR | 2 cut(s) | 185, 2345 |
| BsaBI | GATNNNNATC | 2 cut(s) | 201, 213 |
| BsaJI | CCNNGG | 6 cut(s) | 167, 1035, 1138, 1423, 1500, 1838 |
| BsaWI | WCCGGW | 1 cut(s) | 2162 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 531, 561, 924, 954 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 497, 1415, 1416, 1607, 1838 |
| Bse118I | RCCGGY | 2 cut(s) | 1379, 2162 |
| Bse1I | ACTGG | 5 cut(s) | 835, 904, 1369, 1906, 2424 |
| Bse3DI | GCAATG | 3 cut(s) | 408, 754, 2004 |
| Bse8I | GATNNNNATC | 2 cut(s) | 201, 213 |
| BseBI | CCWGG | 3 cut(s) | 945, 1602, 1839 |
| BseCI | ATCGAT | 1 cut(s) | 2240 |
| BseDI | CCNNGG | 6 cut(s) | 167, 1035, 1138, 1423, 1500, 1838 |
| BseGI | GGATG | 8 cut(s) | 275, 347, 552, 691, 970, 1084, 1519, 1744 |
| BseJI | GATNNNNATC | 2 cut(s) | 201, 213 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 497, 1415, 1416, 1607, 1838 |
| BseMI | GCAATG | 3 cut(s) | 408, 754, 2004 |
| BseMII | CTCAG | 5 cut(s) | 320, 379, 645, 1183, 2352 |
| BseNI | ACTGG | 5 cut(s) | 835, 904, 1369, 1906, 2424 |
| BseRI | GAGGAG | 1 cut(s) | 671 |
| BseSI | GKGCMC | 4 cut(s) | 795, 1315, 1422, 1514 |
| BseYI | CCCAGC | 1 cut(s) | 1872 |
| BsgI | GTGCAG | 1 cut(s) | 2436 |
| Bsh1236I | CGCG | 1 cut(s) | 1751 |
| Bsh1285I | CGRYCG | 1 cut(s) | 173 |
| BshFI | GGCC | 8 cut(s) | 356, 1162, 1223, 1244, 1386, 1611, 1877, 2252 |
| BshNI | GGYRCC | 3 cut(s) | 1367, 1419, 1511 |
| BshTI | ACCGGT | 1 cut(s) | 2162 |
| BshVI | ATCGAT | 1 cut(s) | 2240 |
| BsiEI | CGRYCG | 1 cut(s) | 173 |
| BsiHKAI | GWGCWC | 4 cut(s) | 795, 894, 1240, 1315 |
| BsiHKCI | CYCGRG | 2 cut(s) | 81, 2010 |
| BsiSI | CCGG | 2 cut(s) | 1380, 2163 |
| BsiWI | CGTACG | 1 cut(s) | 1758 |
| BslFI | GGGAC | 4 cut(s) | 1224, 1919, 2264, 2329 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 497, 1415, 1416, 1607, 1838 |
| BsmAI | GTCTC | 2 cut(s) | 462, 2145 |
| BsmFI | GGGAC | 4 cut(s) | 1224, 1919, 2264, 2329 |
| BsmI | GAATGC | 2 cut(s) | 470, 1458 |
| BsnI | GGCC | 8 cut(s) | 356, 1162, 1223, 1244, 1386, 1611, 1877, 2252 |
| BsoBI | CYCGRG | 2 cut(s) | 81, 2010 |
| Bsp119I | TTCGAA | 1 cut(s) | 1590 |
| Bsp1286I | GDGCHC | 6 cut(s) | 795, 894, 1240, 1315, 1422, 1514 |
| Bsp1407I | TGTACA | 1 cut(s) | 1024 |
| Bsp19I | CCATGG | 1 cut(s) | 1500 |
| BspANI | GGCC | 8 cut(s) | 356, 1162, 1223, 1244, 1386, 1611, 1877, 2252 |
| BspCNI | CTCAG | 5 cut(s) | 319, 378, 646, 1182, 2351 |
| BspDI | ATCGAT | 1 cut(s) | 2240 |
| BspFNI | CGCG | 1 cut(s) | 1751 |
| BspHI | TCATGA | 1 cut(s) | 474 |
| BspLI | GGNNCC | 6 cut(s) | 6, 811, 1369, 1421, 1513, 1907 |
| BspMI | ACCTGC | 2 cut(s) | 16, 2009 |
| BspPI | GGATC | 5 cut(s) | 804, 817, 1198, 1569, 2351 |
| BspQI | GCTCTTC | 2 cut(s) | 1525, 2262 |
| BspT104I | TTCGAA | 1 cut(s) | 1590 |
| BspT107I | GGYRCC | 3 cut(s) | 1367, 1419, 1511 |
| BsrBI | CCGCTC | 1 cut(s) | 2255 |
| BsrDI | GCAATG | 3 cut(s) | 408, 754, 2004 |
| BsrFI | RCCGGY | 2 cut(s) | 1379, 2162 |
| BsrGI | TGTACA | 1 cut(s) | 1024 |
| BsrI | ACTGG | 5 cut(s) | 835, 904, 1369, 1906, 2424 |
| BssAI | RCCGGY | 2 cut(s) | 1379, 2162 |
| BssECI | CCNNGG | 6 cut(s) | 167, 1035, 1138, 1423, 1500, 1838 |
| BssT1I | CCWWGG | 3 cut(s) | 1138, 1423, 1500 |
| Bst2UI | CCWGG | 3 cut(s) | 945, 1602, 1839 |
| Bst4CI | ACNGT | 8 cut(s) | 171, 1550, 1624, 1631, 1642, 2083, 2296, 2441 |
| Bst6I | CTCTTC | 6 cut(s) | 123, 465, 1525, 1644, 2262, 2325 |
| BstAUI | TGTACA | 1 cut(s) | 1024 |
| BstBAI | YACGTR | 2 cut(s) | 185, 2345 |
| BstBI | TTCGAA | 1 cut(s) | 1590 |
| BstDEI | CTNAG | 5 cut(s) | 306, 365, 654, 1169, 2338 |
| BstDSI | CCRYGG | 2 cut(s) | 167, 1500 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1605, 1836 |
| BstF5I | GGATG | 8 cut(s) | 275, 347, 552, 691, 970, 1084, 1519, 1744 |
| BstFNI | CGCG | 1 cut(s) | 1751 |
| BstMAI | GTCTC | 2 cut(s) | 462, 2145 |
| BstMCI | CGRYCG | 1 cut(s) | 173 |
| BstNI | CCWGG | 3 cut(s) | 945, 1602, 1839 |
| BstNSI | RCATGY | 1 cut(s) | 1185 |
| BstSCI | CCNGG | 3 cut(s) | 943, 1600, 1837 |
| BstSFI | CTRYAG | 2 cut(s) | 846, 1683 |
| BstSLI | GKGCMC | 4 cut(s) | 795, 1315, 1422, 1514 |
| BstUI | CGCG | 1 cut(s) | 1751 |
| BstV2I | GAAGAC | 1 cut(s) | 1746 |
| BstX2I | RGATCY | 3 cut(s) | 809, 1190, 1561 |
| BstYI | RGATCY | 3 cut(s) | 809, 1190, 1561 |
| Bsu15I | ATCGAT | 1 cut(s) | 2240 |
| BsuRI | GGCC | 8 cut(s) | 356, 1162, 1223, 1244, 1386, 1611, 1877, 2252 |
| BsuTUI | ATCGAT | 1 cut(s) | 2240 |
| BtgI | CCRYGG | 2 cut(s) | 167, 1500 |
| BtsCI | GGATG | 8 cut(s) | 275, 347, 552, 691, 970, 1084, 1519, 1744 |
| BtsI | GCAGTG | 2 cut(s) | 1947, 2115 |
| BtsIMutI | CAGTG | 4 cut(s) | 1555, 1947, 2088, 2115 |
| BveI | ACCTGC | 2 cut(s) | 16, 2009 |
| CaiI | CAGNNNCTG | 2 cut(s) | 719, 1646 |
| CciI | TCATGA | 1 cut(s) | 474 |
| Cfr10I | RCCGGY | 2 cut(s) | 1379, 2162 |
| Cfr13I | GGNCC | 3 cut(s) | 1142, 1875, 1906 |
| ClaI | ATCGAT | 1 cut(s) | 2240 |
| CseI | GACGC | 4 cut(s) | 527, 1018, 1323, 1740 |
| Csp6I | GTAC | 6 cut(s) | 737, 1025, 1368, 1759, 2297, 2342 |
| CspAI | ACCGGT | 1 cut(s) | 2162 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1923, 1958, 2104, 2139 |
| CviQI | GTAC | 6 cut(s) | 737, 1025, 1368, 1759, 2297, 2342 |
| DdeI | CTNAG | 5 cut(s) | 306, 365, 654, 1169, 2338 |
| DraIII | CACNNNGTG | 2 cut(s) | 1235, 1552 |
| EaeI | YGGCCR | 4 cut(s) | 354, 1221, 1242, 2250 |
| Eam1104I | CTCTTC | 6 cut(s) | 123, 465, 1525, 1644, 2262, 2325 |
| EarI | CTCTTC | 6 cut(s) | 123, 465, 1525, 1644, 2262, 2325 |
| EciI | GGCGGA | 1 cut(s) | 382 |
| Eco130I | CCWWGG | 3 cut(s) | 1138, 1423, 1500 |
| Eco147I | AGGCCT | 1 cut(s) | 1611 |
| Eco47I | GGWCC | 2 cut(s) | 1142, 1906 |
| Eco57I | CTGAAG | 5 cut(s) | 446, 1049, 1668, 1734, 2247 |
| Eco88I | CYCGRG | 2 cut(s) | 81, 2010 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1605, 1836 |
| EcoRII | CCWGG | 3 cut(s) | 943, 1600, 1837 |
| EcoT14I | CCWWGG | 3 cut(s) | 1138, 1423, 1500 |
| ErhI | CCWWGG | 3 cut(s) | 1138, 1423, 1500 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1467, 1499, 1659, 1691 |
| FaqI | GGGAC | 4 cut(s) | 1224, 1919, 2264, 2329 |
| FauI | CCCGC | 2 cut(s) | 2198, 2306 |
| FbaI | TGATCA | 1 cut(s) | 1795 |
| FblI | GTMKAC | 2 cut(s) | 181, 1959 |
| FokI | GGATG | 8 cut(s) | 282, 354, 539, 698, 977, 1091, 1506, 1751 |
| FspBI | CTAG | 6 cut(s) | 39, 626, 669, 1139, 1322, 2069 |
| GsaI | CCCAGC | 1 cut(s) | 1876 |
| GsuI | CTGGAG | 3 cut(s) | 558, 951, 2046 |
| HaeIII | GGCC | 8 cut(s) | 356, 1162, 1223, 1244, 1386, 1611, 1877, 2252 |
| HapII | CCGG | 2 cut(s) | 1380, 2163 |
| HgaI | GACGC | 4 cut(s) | 527, 1018, 1323, 1740 |
| HincII | GTYRAC | 4 cut(s) | 88, 1627, 1899, 2292 |
| HindII | GTYRAC | 4 cut(s) | 88, 1627, 1899, 2292 |
| HindIII | AAGCTT | 1 cut(s) | 1585 |
| HpaI | GTTAAC | 1 cut(s) | 1899 |
| HpaII | CCGG | 2 cut(s) | 1380, 2163 |
| HphI | GGTGA | 6 cut(s) | 191, 248, 845, 1221, 1808, 2152 |
| Hpy99I | CGWCG | 3 cut(s) | 57, 521, 1012 |
| HpyAV | CCTTC | 7 cut(s) | 605, 1144, 1501, 1578, 2039, 2271, 2303 |
| HpyCH4III | ACNGT | 8 cut(s) | 171, 1550, 1624, 1631, 1642, 2083, 2296, 2441 |
| HpyCH4IV | ACGT | 3 cut(s) | 184, 2220, 2344 |
| HpyF3I | CTNAG | 5 cut(s) | 306, 365, 654, 1169, 2338 |
| HpySE526I | ACGT | 3 cut(s) | 184, 2220, 2344 |
| KpnI | GGTACC | 1 cut(s) | 1371 |
| Ksp22I | TGATCA | 1 cut(s) | 1795 |
| KspAI | GTTAAC | 1 cut(s) | 1899 |
| LguI | GCTCTTC | 2 cut(s) | 1525, 2262 |
| LmnI | GCTCC | 4 cut(s) | 395, 442, 1255, 2065 |
| MaeI | CTAG | 6 cut(s) | 39, 626, 669, 1139, 1322, 2069 |
| MaeII | ACGT | 3 cut(s) | 184, 2220, 2344 |
| MaeIII | GTNAC | 3 cut(s) | 1119, 1804, 2403 |
| MbiI | CCGCTC | 1 cut(s) | 2255 |
| MfeI | CAATTG | 3 cut(s) | 885, 1128, 1401 |
| MflI | RGATCY | 3 cut(s) | 809, 1190, 1561 |
| MhlI | GDGCHC | 6 cut(s) | 795, 894, 1240, 1315, 1422, 1514 |
| MlsI | TGGCCA | 1 cut(s) | 356 |
| MluI | ACGCGT | 1 cut(s) | 1749 |
| MluNI | TGGCCA | 1 cut(s) | 356 |
| MlyI | GAGTC | 4 cut(s) | 69, 93, 1875, 2311 |
| MmeI | TCCRAC | 5 cut(s) | 97, 478, 787, 805, 897 |
| Mox20I | TGGCCA | 1 cut(s) | 356 |
| MroXI | GAANNNNTTC | 3 cut(s) | 470, 1435, 1596 |
| MscI | TGGCCA | 1 cut(s) | 356 |
| MslI | CAYNNNNRTG | 3 cut(s) | 219, 1231, 2368 |
| Msp20I | TGGCCA | 1 cut(s) | 356 |
| MspA1I | CMGCKG | 3 cut(s) | 398, 1030, 2075 |
| MspI | CCGG | 2 cut(s) | 1380, 2163 |
| MspR9I | CCNGG | 3 cut(s) | 945, 1602, 1839 |
| MunI | CAATTG | 3 cut(s) | 885, 1128, 1401 |
| Mva1269I | GAATGC | 2 cut(s) | 470, 1458 |
| MvaI | CCWGG | 3 cut(s) | 945, 1602, 1839 |
| MvnI | CGCG | 1 cut(s) | 1751 |
| NcoI | CCATGG | 1 cut(s) | 1500 |
| NlaIV | GGNNCC | 6 cut(s) | 6, 811, 1369, 1421, 1513, 1907 |
| NmuCI | GTSAC | 1 cut(s) | 1119 |
| NspI | RCATGY | 1 cut(s) | 1185 |
| NspV | TTCGAA | 1 cut(s) | 1590 |
| PaeR7I | CTCGAG | 1 cut(s) | 81 |
| PagI | TCATGA | 1 cut(s) | 474 |
| PaqCI | CACCTGC | 1 cut(s) | 2009 |
| PceI | AGGCCT | 1 cut(s) | 1611 |
| PciSI | GCTCTTC | 2 cut(s) | 1525, 2262 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 175, 417 |
| PctI | GAATGC | 2 cut(s) | 470, 1458 |
| PdmI | GAANNNNTTC | 3 cut(s) | 470, 1435, 1596 |
| PfeI | GAWTC | 8 cut(s) | 42, 175, 324, 716, 1004, 1721, 1813, 1913 |
| Pfl23II | CGTACG | 1 cut(s) | 1758 |
| PinAI | ACCGGT | 1 cut(s) | 2162 |
| PleI | GAGTC | 4 cut(s) | 69, 92, 1875, 2311 |
| PpsI | GAGTC | 4 cut(s) | 69, 92, 1875, 2311 |
| Ppu21I | YACGTR | 2 cut(s) | 185, 2345 |
| PshBI | ATTAAT | 1 cut(s) | 2052 |
| Psp6I | CCWGG | 3 cut(s) | 943, 1600, 1837 |
| PspFI | CCCAGC | 1 cut(s) | 1872 |
| PspGI | CCWGG | 3 cut(s) | 943, 1600, 1837 |
| PspLI | CGTACG | 1 cut(s) | 1758 |
| PspN4I | GGNNCC | 6 cut(s) | 6, 811, 1369, 1421, 1513, 1907 |
| PspPI | GGNCC | 3 cut(s) | 1142, 1875, 1906 |
| PspXI | VCTCGAGB | 1 cut(s) | 81 |
| PstNI | CAGNNNCTG | 2 cut(s) | 719, 1646 |
| PsuI | RGATCY | 3 cut(s) | 809, 1190, 1561 |
| PvuII | CAGCTG | 2 cut(s) | 1030, 2075 |
| RsaI | GTAC | 6 cut(s) | 738, 1026, 1369, 1760, 2298, 2343 |
| RsaNI | GTAC | 6 cut(s) | 737, 1025, 1368, 1759, 2297, 2342 |
| RseI | CAYNNNNRTG | 3 cut(s) | 219, 1231, 2368 |
| SapI | GCTCTTC | 2 cut(s) | 1525, 2262 |
| Sau96I | GGNCC | 3 cut(s) | 1142, 1875, 1906 |
| SchI | GAGTC | 4 cut(s) | 69, 93, 1875, 2311 |
| ScrFI | CCNGG | 3 cut(s) | 945, 1602, 1839 |
| SduI | GDGCHC | 6 cut(s) | 795, 894, 1240, 1315, 1422, 1514 |
| SfcI | CTRYAG | 2 cut(s) | 846, 1683 |
| Sfr274I | CTCGAG | 1 cut(s) | 81 |
| SfuI | TTCGAA | 1 cut(s) | 1590 |
| SgrAI | CRCCGGYG | 1 cut(s) | 2162 |
| SinI | GGWCC | 2 cut(s) | 1142, 1906 |
| SlaI | CTCGAG | 1 cut(s) | 81 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 219, 1231, 2368 |
| SmlI | CTYRAG | 1 cut(s) | 81 |
| SmoI | CTYRAG | 1 cut(s) | 81 |
| SpeI | ACTAGT | 1 cut(s) | 668 |
| SseBI | AGGCCT | 1 cut(s) | 1611 |
| SspI | AATATT | 2 cut(s) | 1299, 1595 |
| SspMI | CTAG | 6 cut(s) | 39, 626, 669, 1139, 1322, 2069 |
| StuI | AGGCCT | 1 cut(s) | 1611 |
| StyD4I | CCNGG | 3 cut(s) | 943, 1600, 1837 |
| StyI | CCWWGG | 3 cut(s) | 1138, 1423, 1500 |
| TaaI | ACNGT | 8 cut(s) | 171, 1550, 1624, 1631, 1642, 2083, 2296, 2441 |
| TaiI | ACGT | 3 cut(s) | 187, 2223, 2347 |
| TaqII | GACCGA | 1 cut(s) | 1049 |
| TatI | WGTACW | 2 cut(s) | 736, 1024 |
| TauI | GCSGC | 7 cut(s) | 398, 419, 578, 1226, 1386, 1496, 2255 |
| TfiI | GAWTC | 8 cut(s) | 42, 175, 324, 716, 1004, 1721, 1813, 1913 |
| TscAI | CASTG | 4 cut(s) | 1555, 1947, 2088, 2122 |
| TseFI | GTSAC | 1 cut(s) | 1119 |
| Tsp45I | GTSAC | 1 cut(s) | 1119 |
| TspDTI | ATGAA | 7 cut(s) | 368, 463, 1681, 1734, 1766, 2322, 2378 |
| TspGWI | ACGGA | 4 cut(s) | 113, 282, 1776, 2160 |
| TspRI | CASTG | 4 cut(s) | 1555, 1947, 2088, 2122 |
| VneI | GTGCAC | 2 cut(s) | 791, 1311 |
| VpaK11BI | GGWCC | 2 cut(s) | 1142, 1906 |
| VspI | ATTAAT | 1 cut(s) | 2052 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1605, 1836 |
| XapI | RAATTY | 1 cut(s) | 958 |
| XbaI | TCTAGA | 1 cut(s) | 1321 |
| XceI | RCATGY | 1 cut(s) | 1185 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2367 |
| XhoI | CTCGAG | 1 cut(s) | 81 |
| XmaJI | CCTAGG | 1 cut(s) | 1138 |
| XmiI | GTMKAC | 2 cut(s) | 181, 1959 |
| XmnI | GAANNNNTTC | 3 cut(s) | 470, 1435, 1596 |
| XspI | CTAG | 6 cut(s) | 39, 626, 669, 1139, 1322, 2069 |