Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004000.1

Orthogroup ID

OG0013554

Physical Location & Seq

Genomic Coordinates Reverse (-)

31263 .. 38679

Gene Structure 7417 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004000.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2787 bp

atggaaaccctaaagcttccaatttcaatcagattccccaatcaccactctcctcttctcaaccaccaccacccaaccaccaccgccactcgtctcatctcccccaaacccattctccgccgcctccgctctcctctctttcggttcaaaccctgtctcctttctcccccgcgaaatttctctactcttcttcgttgctccgccgccgaggtccactccgatcacgatcaccaccaccaccacgatcacgatcacggtcacgaccaccaccaccatcatccgccaaaaatggaaaccctaaagcttccaatttcaatcagattccccaatcaccactctcctcttctcaaccaccaccaccaccaccaccacccaaccaccaccgccactcgtctcatctcccccaaacccattctccgccgcctccgctctcctctctttcggttcaaaccctctctcctttctcccccgcgaaatttccgtactcttcttcgttgctccgccgccgaggtccactccgatcacgatcaccaccacgatcacggtaacgaccaccaccaccatcaccaccaccacggcggagattgtgcggagctaaccgggactcagaaagcgttcatcggatttgcaaaggctgtgcgatggaccgacctcgccgatttcctcagggagcacttgcatttgtgtttctgctccgccgcgctgctcgtcgccgccgccgcttgcccttacgtggttcccaagctcgccgtgaagcctctgcagaatgctttcatgatcgtcgcttttcctctagtcggagtctctgcggcacttgatgcaatgactgacattagtggcgggaaggtgaacattcatgtactaatggctttggcagcatttgcctcggtgtttatggggaatgctcttgaaggaggcttgcttttggctatgttcaatcttgctcatatcgctgaggagtattttacgagtcgctccatgatcgatgtgaaagagttgaaagaaaattatccggattctgcccttgttctggatatggatggtgaacaggttccggatacatctaatttgaagtacaagcaggttcctgtgcacgacctacaagtcgggtcatatatcttggttggagctggagagtctgtgcctgtagattgtgaagtgttccaaggtagtgctaccattactatcgagcacttaacgggagaagttacgccattggagacaaaagctggagacatgatacctggtggtgctaggaacttggatggcaggataatagtgaaggcaagaaaaaattggaaagagtcaacccttagcaggattgtgcaattgacagaagaagcacaattaaataaaccaaagcttcagaggtggttagatcagtttggcgagcaatacagcaaggtggttgtagttttgtcagtcactgttgctctacttggtccattcctattcaagtggccgttcattggtacatcagcttgcagaggatcagtttatagagcattgggcctcatggtggcagcatcaccgtgtgctttggctgtagctccattggcctatgctactgcagttagctcctgtgcaaggaagggtatattgttgaaaggcggtcatgtgctagatgctctagcttcctgtcacactattgcgtttgataaaactgggaccctgacaaccgggggcctagcgtttaaagcgattgaaccaatttatggacatcaagttagaaacaataaatcagatttttcttcctgttgtgtgccaagctgtgaaaaggaggcccttgctgtcgctgccgcaatggagaagggtaccactcaccctattggaagagctgttgtagaccatagtgaagggaaagaccttccttctgtttctgttgagagttttgagtattttcccggcagaggtctagttgctactgtcaatggcatcgagttaggaactcaagggggtaaactgttgaaagcatctcttggttcagtagatttcatcacttcactgtgtttgtcggaagatgcatccaaaaagatcaaggaagctgtgaatgcttcttcttacggaactgattttgttcgtgctgctctttcagtcgatgaaaaggtaacactgattcacctcgaggataggcctcgacctggggtcttggatgtcattgcagagttacaaaatcaagcaaagctccgtataatgatgttaactggtgatcatgagtcaagtgcttggagagttgcaaatgctgtaggtatcaatgaagttcattgcagcctgaagcctgaggataaactgagtcatgtcaagggtgtctcaagggaaatggggggaggtctgataatggttggtgaaggtattaatgatgctccagcacttgcagctgcaacggtagggattgtccttgctcaacgtgctagtgcaactgccacagctgttgctgatgtgttgttgctgcgtgacaatatatctgccgtgccattctgtattgccaagtctcgccaaacaacttccctggttaagcagaatgtagtccttgctttaagctgtatagttttggcctctcttccatctgttttaggttttcttcccctctggttaacggttctattacatgaaggcggtacccttcttgtctgcctcaactccatccgtgctctaaaccaaccgacatggagctggaggcaggatttatgggatttatttaaccaactgaaatcaagactcgaattgtcaaggagacttgcaacgagctcaaactgcacccaagctgcacctccggtatccttataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0003824 GO:0005215 GO:0005385 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006812 GO:0006829 GO:0006873 GO:0006875 GO:0006878 GO:0008150 GO:0008324 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009536 GO:0009628 GO:0009642 GO:0009941 GO:0009987 GO:0015075 GO:0015318 GO:0015633 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019725 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0031967 GO:0031975 GO:0034220 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046915 GO:0046916 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0055065 GO:0055069 GO:0055070 GO:0055076 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0070838 GO:0071577 GO:0072507 GO:0072509 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

E1-E2_ATPase Hydrolase

Protein Analysis

928

Amino Acids

101.09

Weight (kDa)

8.46

Isoelectric Point (pI)

35.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013554)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37270
fragaria_vesca	FvH4_1g16780 FvH4_1g16780 FvH4_1g16780
malus_domestica	MD02G1179100.v1.1 MD15G1288800.v1.1
prunus_persica	Prupe.6G228900_v2.0.a1
pyrus_communis	pycom02g14510
rosa_chinensis	RchiOBHm_Chr2g0106681
rosa_laevigata	RLG00000017530
rosa_multiflora	Rmu_sc0004000.1_g000005
rosa_roxburghii	Rroxscaffold_2G00136890
rosa_rugosa	Rorug02G0137700
rosa_samantha	Rh2AG188700 Rh2BG199900 Rh2CG193800 Rh2DG195000
rosa_wichuraiana	Rw2G014840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2785
AasI	GACNNNNNNGTC	1 cut(s)	1103
AbsI	CCTCGAGG	1 cut(s)	2123
Acc36I	ACCTGC	1 cut(s)	1072
Acc65I	GGTACC	2 cut(s)	1814, 2618
AccB1I	GGYRCC	2 cut(s)	1814, 2618
AccB7I	CCANNNNNTGG	1 cut(s)	1715
AccBSI	CCGCTC	2 cut(s)	129, 429
AccI	GTMKAC	1 cut(s)	1845
AccII	CGCG	3 cut(s)	172, 472, 701
AccIII	TCCGGA	2 cut(s)	1012, 1054
AclWI	GGATC	1 cut(s)	1498
AcoI	YGGCCR	1 cut(s)	1460
AcsI	RAATTY	2 cut(s)	175, 475
AcuI	CTGAAG	2 cut(s)	1349, 2294
AdeI	CACNNNGTG	1 cut(s)	1535
AfaI	GTAC	6 cut(s)	484, 861, 1076, 1474, 1816, 2620
AhdI	GACNNNNNGTC	1 cut(s)	2144
AjnI	CCWGG	3 cut(s)	1243, 2140, 2508
Alw21I	GWGCWC	5 cut(s)	675, 1095, 1194, 2653, 2750
Alw26I	GTCTC	9 cut(s)	98, 161, 398, 808, 1214, 1227, 2314, 2496, 2728
Alw44I	GTGCAC	1 cut(s)	1091
AlwI	GGATC	1 cut(s)	1498
AlwNI	CAGNNNCTG	1 cut(s)	1427
Ama87I	CYCGRG	1 cut(s)	2123
Aor13HI	TCCGGA	2 cut(s)	1012, 1054
AoxI	GGCC	7 cut(s)	1460, 1510, 1557, 1684, 1782, 2132, 2553
ApaLI	GTGCAC	1 cut(s)	1091
ApoI	RAATTY	2 cut(s)	175, 475
AseI	ATTAAT	1 cut(s)	2355
Asp700I	GAANNNNTTC	3 cut(s)	614, 770, 1050
Asp718I	GGTACC	2 cut(s)	1814, 2618
AspLEI	GCGC	1 cut(s)	703
AspS9I	GGNCC	8 cut(s)	211, 511, 645, 1442, 1510, 1668, 1684, 1783
AsuC2I	CCSGG	3 cut(s)	601, 1681, 1905
AvaI	CYCGRG	1 cut(s)	2123
AvaII	GGWCC	5 cut(s)	211, 511, 645, 1442, 1668
AxyI	CCTNAGG	2 cut(s)	665, 2280
BaeGI	GKGCMC	1 cut(s)	1095
BanI	GGYRCC	2 cut(s)	1814, 2618
BanII	GRGCYC	1 cut(s)	2750
Bbv12I	GWGCWC	5 cut(s)	675, 1095, 1194, 2653, 2750
BbvCI	CCTCAGC	1 cut(s)	954
BccI	CCATC	7 cut(s)	282, 570, 636, 1034, 1259, 2572, 2651
BceAI	ACGGC	4 cut(s)	592, 734, 1447, 2453
BcgI	CGANNNNNNTGC	2 cut(s)	867, 901
BciT130I	CCWGG	3 cut(s)	1245, 2142, 2510
BciVI	GTATCC	1 cut(s)	1051
BclI	TGATCA	1 cut(s)	2209
BcnI	CCSGG	3 cut(s)	601, 1681, 1905
BcoDI	GTCTC	9 cut(s)	98, 161, 398, 808, 1214, 1227, 2314, 2496, 2728
BfaI	CTAG	7 cut(s)	794, 1254, 1622, 1631, 1688, 1916, 2412
BfmI	CTRYAG	5 cut(s)	761, 1146, 1545, 1569, 2244
BfuAI	ACCTGC	1 cut(s)	1072
BfuI	GTATCC	1 cut(s)	1051
Bme1390I	CCNGG	6 cut(s)	601, 1245, 1681, 1905, 2142, 2510
Bme18I	GGWCC	5 cut(s)	211, 511, 645, 1442, 1668
BmeRI	GACNNNNNGTC	1 cut(s)	2144
BmeT110I	CYCGRG	1 cut(s)	2123
BmgT120I	GGNCC	8 cut(s)	211, 511, 645, 1442, 1510, 1668, 1684, 1783
BmiI	GGNNCC	8 cut(s)	738, 1053, 1086, 1669, 1670, 1685, 1816, 2620
BmrFI	CCNGG	6 cut(s)	601, 1245, 1681, 1905, 2142, 2510
BmrI	ACTGGG	1 cut(s)	1674
BmsI	GCATC	8 cut(s)	808, 1535, 1615, 1944, 1982, 2011, 2033, 2350
BmuI	ACTGGG	1 cut(s)	1674
BplI	GAGNNNNNCTC	4 cut(s)	200, 232, 500, 532
BpmI	CTGGAG	4 cut(s)	1152, 1251, 2349, 2695
Bpu10I	CCTNAGC	2 cut(s)	954, 1313
BpuEI	CTTGAG	2 cut(s)	1935, 2296
BpuMI	CCSGG	3 cut(s)	601, 1681, 1905
Bsa29I	ATCGAT	1 cut(s)	984
BsaAI	YACGTR	1 cut(s)	733
BsaBI	GATNNNNATC	3 cut(s)	225, 249, 525
BsaJI	CCNNGG	8 cut(s)	207, 507, 574, 885, 1165, 1680, 2141, 2508
BsaWI	WCCGGW	3 cut(s)	1012, 1054, 2773
Bse1I	ACTGG	2 cut(s)	1669, 2209
Bse21I	CCTNAGG	2 cut(s)	665, 2280
Bse3DI	GCAATG	4 cut(s)	828, 1809, 2157, 2263
Bse8I	GATNNNNATC	3 cut(s)	225, 249, 525
BseAI	TCCGGA	2 cut(s)	1012, 1054
BseBI	CCWGG	3 cut(s)	1245, 2142, 2510
BseCI	ATCGAT	1 cut(s)	984
BseDI	CCNNGG	8 cut(s)	207, 507, 574, 885, 1165, 1680, 2141, 2508
BseGI	GGATG	6 cut(s)	277, 1045, 1270, 2024, 2158, 2643
BseJI	GATNNNNATC	3 cut(s)	225, 249, 525
BseMI	GCAATG	4 cut(s)	828, 1809, 2157, 2263
BseMII	CTCAG	5 cut(s)	620, 679, 945, 2271, 2282
BseNI	ACTGG	2 cut(s)	1669, 2209
BseRI	GAGGAG	5 cut(s)	42, 123, 330, 423, 971
BseSI	GKGCMC	1 cut(s)	1095
BsgI	GTGCAG	2 cut(s)	2740, 2751
Bsh1236I	CGCG	3 cut(s)	172, 472, 701
BshFI	GGCC	7 cut(s)	1462, 1512, 1559, 1686, 1784, 2134, 2555
BshNI	GGYRCC	2 cut(s)	1814, 2618
BshVI	ATCGAT	1 cut(s)	984
BsiHKAI	GWGCWC	5 cut(s)	675, 1095, 1194, 2653, 2750
BsiHKCI	CYCGRG	1 cut(s)	2123
BsiSI	CCGG	6 cut(s)	600, 1013, 1055, 1680, 1905, 2774
BslFI	GGGAC	2 cut(s)	616, 1681
BsmAI	GTCTC	9 cut(s)	98, 161, 398, 808, 1214, 1227, 2314, 2496, 2728
BsmBI	CGTCTC	2 cut(s)	98, 398
BsmFI	GGGAC	2 cut(s)	616, 1681
BsmI	GAATGC	3 cut(s)	772, 907, 2056
BsnI	GGCC	7 cut(s)	1462, 1512, 1559, 1686, 1784, 2134, 2555
BsoBI	CYCGRG	1 cut(s)	2123
Bsp1286I	GDGCHC	5 cut(s)	675, 1095, 1194, 2653, 2750
Bsp13I	TCCGGA	2 cut(s)	1012, 1054
BspANI	GGCC	7 cut(s)	1462, 1512, 1559, 1686, 1784, 2134, 2555
BspCNI	CTCAG	5 cut(s)	619, 678, 946, 2272, 2283
BspDI	ATCGAT	1 cut(s)	984
BspEI	TCCGGA	2 cut(s)	1012, 1054
BspFNI	CGCG	3 cut(s)	172, 472, 701
BspHI	TCATGA	2 cut(s)	774, 2212
BspLI	GGNNCC	8 cut(s)	738, 1053, 1086, 1669, 1670, 1685, 1816, 2620
BspMAI	CTGCAG	2 cut(s)	765, 1573
BspMI	ACCTGC	1 cut(s)	1072
BspPI	GGATC	1 cut(s)	1498
BspQI	GCTCTTC	1 cut(s)	1828
BspT107I	GGYRCC	2 cut(s)	1814, 2618
BsrBI	CCGCTC	2 cut(s)	129, 429
BsrDI	GCAATG	4 cut(s)	828, 1809, 2157, 2263
BsrI	ACTGG	2 cut(s)	1669, 2209
BssECI	CCNNGG	8 cut(s)	207, 507, 574, 885, 1165, 1680, 2141, 2508
BssT1I	CCWWGG	1 cut(s)	1165
Bst2UI	CCWGG	3 cut(s)	1245, 2142, 2510
Bst4CI	ACNGT	9 cut(s)	257, 545, 1429, 1533, 1927, 1965, 2007, 2386, 2599
Bst6I	CTCTTC	6 cut(s)	60, 192, 348, 492, 1828, 2565
BstAPI	GCANNNNNTGC	2 cut(s)	818, 881
BstBAI	YACGTR	1 cut(s)	733
BstC8I	GCNNGC	5 cut(s)	724, 747, 920, 1391, 1483
BstDEI	CTNAG	6 cut(s)	606, 665, 954, 1313, 2280, 2291
BstDSI	CCRYGG	1 cut(s)	574
BstENI	CCTNNNNNAGG	1 cut(s)	1585
BstF5I	GGATG	6 cut(s)	277, 1045, 1270, 2024, 2158, 2643
BstFNI	CGCG	3 cut(s)	172, 472, 701
BstHHI	GCGC	1 cut(s)	703
BstMAI	GTCTC	9 cut(s)	98, 161, 398, 808, 1214, 1227, 2314, 2496, 2728
BstNI	CCWGG	3 cut(s)	1245, 2142, 2510
BstSCI	CCNGG	6 cut(s)	599, 1243, 1679, 1903, 2140, 2508
BstSFI	CTRYAG	5 cut(s)	761, 1146, 1545, 1569, 2244
BstSLI	GKGCMC	1 cut(s)	1095
BstUI	CGCG	3 cut(s)	172, 472, 701
Bsu15I	ATCGAT	1 cut(s)	984
Bsu36I	CCTNAGG	2 cut(s)	665, 2280
BsuI	GTATCC	1 cut(s)	1051
BsuRI	GGCC	7 cut(s)	1462, 1512, 1559, 1686, 1784, 2134, 2555
BsuTUI	ATCGAT	1 cut(s)	984
BtgI	CCRYGG	1 cut(s)	574
BtgZI	GCGATG	1 cut(s)	655
BtsCI	GGATG	6 cut(s)	277, 1045, 1270, 2024, 2158, 2643
BtsIMutI	CAGTG	3 cut(s)	1425, 2003, 2111
BveI	ACCTGC	1 cut(s)	1072
Cac8I	GCNNGC	5 cut(s)	724, 747, 920, 1391, 1483
CaiI	CAGNNNCTG	1 cut(s)	1427
CciI	TCATGA	2 cut(s)	774, 2212
CfoI	GCGC	1 cut(s)	703
Cfr13I	GGNCC	8 cut(s)	211, 511, 645, 1442, 1510, 1668, 1684, 1783
ClaI	ATCGAT	1 cut(s)	984
CsiI	ACCWGGT	1 cut(s)	1243
Csp6I	GTAC	6 cut(s)	483, 860, 1075, 1473, 1815, 2619
CspCI	CAANNNNNGTGG	2 cut(s)	2413, 2448
CviQI	GTAC	6 cut(s)	483, 860, 1075, 1473, 1815, 2619
DdeI	CTNAG	6 cut(s)	606, 665, 954, 1313, 2280, 2291
DraI	TTTAAA	1 cut(s)	1696
DraIII	CACNNNGTG	1 cut(s)	1535
DrdI	GACNNNNNNGTC	1 cut(s)	1103
DriI	GACNNNNNGTC	1 cut(s)	2144
DseDI	GACNNNNNNGTC	1 cut(s)	1103
EaeI	YGGCCR	1 cut(s)	1460
Eam1104I	CTCTTC	6 cut(s)	60, 192, 348, 492, 1828, 2565
Eam1105I	GACNNNNNGTC	1 cut(s)	2144
EarI	CTCTTC	6 cut(s)	60, 192, 348, 492, 1828, 2565
EciI	GGCGGA	7 cut(s)	107, 190, 270, 407, 490, 594, 685
Ecl136II	GAGCTC	1 cut(s)	2748
Eco130I	CCWWGG	1 cut(s)	1165
Eco147I	AGGCCT	1 cut(s)	2134
Eco24I	GRGCYC	1 cut(s)	2750
Eco47I	GGWCC	5 cut(s)	211, 511, 645, 1442, 1668
Eco53kI	GAGCTC	1 cut(s)	2748
Eco57I	CTGAAG	2 cut(s)	1349, 2294
Eco81I	CCTNAGG	2 cut(s)	665, 2280
Eco88I	CYCGRG	1 cut(s)	2123
EcoICRI	GAGCTC	1 cut(s)	2748
EcoNI	CCTNNNNNAGG	1 cut(s)	1585
EcoO109I	RGGNCCY	3 cut(s)	1668, 1684, 1783
EcoRII	CCWGG	3 cut(s)	1243, 2140, 2508
EcoT14I	CCWWGG	1 cut(s)	1165
EcoT22I	ATGCAT	1 cut(s)	2026
EcoT38I	GRGCYC	1 cut(s)	2750
ErhI	CCWWGG	1 cut(s)	1165
Esp3I	CGTCTC	2 cut(s)	98, 398
FalI	AAGNNNNNCTT	2 cut(s)	1962, 1994
FaqI	GGGAC	2 cut(s)	616, 1681
FauI	CCCGC	3 cut(s)	177, 477, 833
FbaI	TGATCA	1 cut(s)	2209
FblI	GTMKAC	1 cut(s)	1845
FokI	GGATG	6 cut(s)	264, 1052, 1277, 2011, 2165, 2630
FriOI	GRGCYC	1 cut(s)	2750
FspBI	CTAG	7 cut(s)	794, 1254, 1622, 1631, 1688, 1916, 2412
GlaI	GCGC	1 cut(s)	702
GsuI	CTGGAG	4 cut(s)	1152, 1251, 2349, 2695
HaeIII	GGCC	7 cut(s)	1462, 1512, 1559, 1686, 1784, 2134, 2555
HapII	CCGG	6 cut(s)	600, 1013, 1055, 1680, 1905, 2774
HhaI	GCGC	1 cut(s)	703
Hin6I	GCGC	1 cut(s)	701
HinP1I	GCGC	1 cut(s)	701
HincII	GTYRAC	3 cut(s)	1308, 2202, 2595
HindII	GTYRAC	3 cut(s)	1308, 2202, 2595
HindIII	AAGCTT	3 cut(s)	14, 302, 1361
HpaI	GTTAAC	2 cut(s)	2202, 2595
HpaII	CCGG	6 cut(s)	600, 1013, 1055, 1680, 1905, 2774
Hpy99I	CGWCG	2 cut(s)	713, 785
HpyCH4III	ACNGT	9 cut(s)	257, 545, 1429, 1533, 1927, 1965, 2007, 2386, 2599
HpyCH4IV	ACGT	2 cut(s)	732, 2407
HpyF3I	CTNAG	6 cut(s)	606, 665, 954, 1313, 2280, 2291
HpySE526I	ACGT	2 cut(s)	732, 2407
HspAI	GCGC	1 cut(s)	701
KflI	GGGWCCC	1 cut(s)	1668
Kpn2I	TCCGGA	2 cut(s)	1012, 1054
KpnI	GGTACC	2 cut(s)	1818, 2622
Ksp22I	TGATCA	1 cut(s)	2209
KspAI	GTTAAC	2 cut(s)	2202, 2595
LguI	GCTCTTC	1 cut(s)	1828
LweI	GCATC	8 cut(s)	808, 1535, 1615, 1944, 1982, 2011, 2033, 2350
MabI	ACCWGGT	1 cut(s)	1243
MaeI	CTAG	7 cut(s)	794, 1254, 1622, 1631, 1688, 1916, 2412
MaeII	ACGT	2 cut(s)	732, 2407
MaeIII	GTNAC	8 cut(s)	257, 545, 1207, 1423, 1640, 2107, 2166, 2453
MbiI	CCGCTC	2 cut(s)	129, 429
MfeI	CAATTG	1 cut(s)	1328
MhlI	GDGCHC	5 cut(s)	675, 1095, 1194, 2653, 2750
MlyI	GAGTC	8 cut(s)	598, 810, 979, 1145, 1313, 2225, 2302, 2712
MmeI	TCCRAC	3 cut(s)	778, 1105, 1995
Mph1103I	ATGCAT	1 cut(s)	2026
MroI	TCCGGA	2 cut(s)	1012, 1054
MroXI	GAANNNNTTC	3 cut(s)	614, 770, 1050
MseI	TTAA	9 cut(s)	1196, 1349, 1695, 2201, 2355, 2514, 2537, 2594, 2700
MslI	CAYNNNNRTG	1 cut(s)	1531
MspA1I	CMGCKG	2 cut(s)	2378, 2429
MspI	CCGG	6 cut(s)	600, 1013, 1055, 1680, 1905, 2774
MspR9I	CCNGG	6 cut(s)	601, 1245, 1681, 1905, 2142, 2510
MunI	CAATTG	1 cut(s)	1328
Mva1269I	GAATGC	3 cut(s)	772, 907, 2056
MvaI	CCWGG	3 cut(s)	1245, 2142, 2510
MvnI	CGCG	3 cut(s)	172, 472, 701
NciI	CCSGG	3 cut(s)	601, 1681, 1905
NlaIV	GGNNCC	8 cut(s)	738, 1053, 1086, 1669, 1670, 1685, 1816, 2620
NmeAIII	GCCGAG	2 cut(s)	232, 532
NmuCI	GTSAC	4 cut(s)	257, 1423, 1640, 2453
NsiI	ATGCAT	1 cut(s)	2026
PaeR7I	CTCGAG	1 cut(s)	2123
PagI	TCATGA	2 cut(s)	774, 2212
PceI	AGGCCT	1 cut(s)	2134
PciSI	GCTCTTC	1 cut(s)	1828
PctI	GAATGC	3 cut(s)	772, 907, 2056
PdmI	GAANNNNTTC	3 cut(s)	614, 770, 1050
PfeI	GAWTC	4 cut(s)	33, 321, 1016, 2116
PflMI	CCANNNNNTGG	1 cut(s)	1715
PleI	GAGTC	8 cut(s)	598, 809, 978, 1144, 1312, 2224, 2301, 2712
PpsI	GAGTC	8 cut(s)	598, 809, 978, 1144, 1312, 2224, 2301, 2712
Ppu21I	YACGTR	1 cut(s)	733
PpuMI	RGGWCCY	1 cut(s)	1668
PshBI	ATTAAT	1 cut(s)	2355
PsiI	TTATAA	1 cut(s)	2785
Psp124BI	GAGCTC	1 cut(s)	2750
Psp5II	RGGWCCY	1 cut(s)	1668
Psp6I	CCWGG	3 cut(s)	1243, 2140, 2508
PspGI	CCWGG	3 cut(s)	1243, 2140, 2508
PspN4I	GGNNCC	8 cut(s)	738, 1053, 1086, 1669, 1670, 1685, 1816, 2620
PspPI	GGNCC	8 cut(s)	211, 511, 645, 1442, 1510, 1668, 1684, 1783
PspPPI	RGGWCCY	1 cut(s)	1668
PspXI	VCTCGAGB	1 cut(s)	2123
PstI	CTGCAG	2 cut(s)	765, 1573
PstNI	CAGNNNCTG	1 cut(s)	1427
PvuII	CAGCTG	2 cut(s)	2378, 2429
RsaI	GTAC	6 cut(s)	484, 861, 1076, 1474, 1816, 2620
RsaNI	GTAC	6 cut(s)	483, 860, 1075, 1473, 1815, 2619
RseI	CAYNNNNRTG	1 cut(s)	1531
SacI	GAGCTC	1 cut(s)	2750
SapI	GCTCTTC	1 cut(s)	1828
SaqAI	TTAA	9 cut(s)	1196, 1349, 1695, 2201, 2355, 2514, 2537, 2594, 2700
Sau96I	GGNCC	8 cut(s)	211, 511, 645, 1442, 1510, 1668, 1684, 1783
SchI	GAGTC	8 cut(s)	598, 810, 979, 1145, 1313, 2225, 2302, 2712
ScrFI	CCNGG	6 cut(s)	601, 1245, 1681, 1905, 2142, 2510
SduI	GDGCHC	5 cut(s)	675, 1095, 1194, 2653, 2750
SexAI	ACCWGGT	1 cut(s)	1243
SfaNI	GCATC	8 cut(s)	808, 1535, 1615, 1944, 1982, 2011, 2033, 2350
SfcI	CTRYAG	5 cut(s)	761, 1146, 1545, 1569, 2244
Sfr274I	CTCGAG	1 cut(s)	2123
SinI	GGWCC	5 cut(s)	211, 511, 645, 1442, 1668
SlaI	CTCGAG	1 cut(s)	2123
SmiMI	CAYNNNNRTG	1 cut(s)	1531
SmlI	CTYRAG	3 cut(s)	1950, 2123, 2311
SmoI	CTYRAG	3 cut(s)	1950, 2123, 2311
SseBI	AGGCCT	1 cut(s)	2134
SspMI	CTAG	7 cut(s)	794, 1254, 1622, 1631, 1688, 1916, 2412
SstI	GAGCTC	1 cut(s)	2750
StuI	AGGCCT	1 cut(s)	2134
StyD4I	CCNGG	6 cut(s)	599, 1243, 1679, 1903, 2140, 2508
StyI	CCWWGG	1 cut(s)	1165
TaaI	ACNGT	9 cut(s)	257, 545, 1429, 1533, 1927, 1965, 2007, 2386, 2599
TaiI	ACGT	2 cut(s)	735, 2410
TaqI	TCGA	7 cut(s)	984, 1188, 1938, 2097, 2124, 2137, 2721
TaqII	GACCGA	1 cut(s)	662
TatI	WGTACW	2 cut(s)	859, 1074
TfiI	GAWTC	4 cut(s)	33, 321, 1016, 2116
Tru1I	TTAA	9 cut(s)	1196, 1349, 1695, 2201, 2355, 2514, 2537, 2594, 2700
Tru9I	TTAA	9 cut(s)	1196, 1349, 1695, 2201, 2355, 2514, 2537, 2594, 2700
TscAI	CASTG	3 cut(s)	1432, 2010, 2118
TseFI	GTSAC	4 cut(s)	257, 1423, 1640, 2453
Tsp45I	GTSAC	4 cut(s)	257, 1423, 1640, 2453
TspDTI	ATGAA	9 cut(s)	607, 763, 845, 1456, 1984, 2115, 2252, 2271, 2625
TspGWI	ACGGA	4 cut(s)	470, 2079, 2177, 2636
TspRI	CASTG	3 cut(s)	1432, 2010, 2118
Van91I	CCANNNNNTGG	1 cut(s)	1715
VneI	GTGCAC	1 cut(s)	1091
VpaK11BI	GGWCC	5 cut(s)	211, 511, 645, 1442, 1668
VspI	ATTAAT	1 cut(s)	2355
XagI	CCTNNNNNAGG	1 cut(s)	1585
XapI	RAATTY	2 cut(s)	175, 475
XhoI	CTCGAG	1 cut(s)	2123
XmiI	GTMKAC	1 cut(s)	1845
XmnI	GAANNNNTTC	3 cut(s)	614, 770, 1050
XspI	CTAG	7 cut(s)	794, 1254, 1622, 1631, 1688, 1916, 2412
Zsp2I	ATGCAT	1 cut(s)	2026

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.