Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0013554

Physical Location & Seq

Genomic Coordinates Reverse (-)

16953488 .. 16961001

Gene Structure 7514 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G014840.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2508 bp

ATGGAAACCCTAAAGCTTCCAATTTCAATCAGATTCCCCAATCACCACTCTCCTCTTCTCAACCACCACCACCACCACCCAACCACCACCGCCACTCGTCTCATCTCCCCCAAACCCATTCTCCGCCGCCTCCGCTCTCCTCTCTTTCGGTTCAAACCCTCTCTCCTTTCTCCCCCGCGAAATTTCCCTACTCTTCTTCGTTGCTCCGCCGCCGAGGTCCACTCCGATCACGATCACCACCACCACCACCACGATCACGACCACGGTCACGACCACCACCACCATCATCACCACCACGGCGGAGATTGTGCGGAGCTAACCGGGACTCAGAAAGCGTTCATCGGATTTGCAAAGGCTGTGCGATGGACCGACCTCGCCGATTTCCTCAGGGAGCACTTGCATTTGTGTTTCTGCTCCGCCGCGCTGTTCCTCGCCGCCGCCGCTTGCCCTTACGTGGTTCCCAAGCTCGCCGTGAAGCCTCTGCAGAATGCTTTCATGATCGTCGCTTTTCCTCTAGTCGGAGTCTCTGCGGCACTTGATGCAATGACTGACATTAGTGGCGGGAAGGTGAACATTCATGTACTAATGGCTTTGGCAGCATTTGCCTCGGTGTTTATGGGGAATGCTCTTGAAGGAGGCTTGCTTTTGGCTATGTTCAATCTTGCTCATATCGCTGAGGAGTATTTTACGAGTCGCTCCATGATCGATGTGAAAGAGTTGAAAGAAAATTATCCGGATTCTGCCCTTGTTCTGGATATGGATGATGAACAGGTTCCGGATACATCTAATTTGAAGTACAAGCAGGTTCCTGTGCACGACATACAAGTCGGGTCATATATCTTGGTTGGAGCTGGAGAGTCTGTGCCTGTAGATTGTGAAGTGTTCCAAGGTAGTGCTACCATTACTATTGAGCACTTAACGGGAGAAATTACGCCATTGGAGACAAAAGCTGGAGACATGATACCTGGTGGTGCTAGGAACTTGGATGGCAGGATAATAGTGAAGGCAAGAAAAAATTGGAAAGAGTCAACCCTTAGCAGGATTGTGCAATTGACAGAAGAAGCACAATTAAATAAACCAAAGCTTCAGAGGTGGTTAGATCAGTTTGGCGAGCAATACAGCAAGGTGGTTGTAGTTTTGTCAGTCACTGTTGCTCTACTTGGTCCATTCCTATTCAAGTGGCCGTTCATTGGTACATCAGCTTGCAGAGGATCAGTTTATAGAGCATTGGGCCTCATGGTGGCAGCATCACCGTGTGCTTTGGCTGTAGCTCCATTGGCCTATGCTACTGCAGTTAGCTCCTGTGCAAGGAAGGGTATATTGTTGAAAGGCGGTCATGTGCTAGATGCTCTAGCTTCCTGTCACACTATTGCGTTTGATAAAACTGGGACCTTGACAACTGGGGGCCTAGCGTTTAAAGCGATTGAACCAATTTATGGACATCAAGTTAGAAACAATAAATCAGATTTTTCTTCCTGTTGTGTGCCAAGCTGTGAAAAGGAGGCCCTTGCTGTCGCTGCCGCAATGGAGAAGGGTACCACTCACCCTATTGGAAGAGCTGTTGTAGACCATAGTGAAGGGAAAGACCTTCCTTCTGTTTCTGTTGAGAGTTTTGAGTATTTTCCCGGCAGAGGTCTAGTTGCTACTGTCAATGGCATCGAGTTAGGAACTCAAGGGGGTAAACTGTTGAAAGCATCTCTTGGTTCAGTAGATTTCATCACTTCACTGTGTTTGTCGGAAGATGCATCCAAAAAGATCAAGGAAGCTGTGAATGCTTCTTCTTACGGAACTGATTTTGTTCGTGCTGCTCTTTCAGTCAACGAAAAGGTAACACTGATTCACCTCGAGGATAGGCCTCGACCTGGGGTCTTGGATGTCATTGCAGAGTTACAAAATCAAGCAAAGCTCCGTATAATGATGTTAACTGGTGATCATGAGTCAAGTGCTTGGAGAGTTGCAAATGCTGTAGGTATCAATGAAGTTCATTGCAGCCTGAAGCCTGAGGATAAACTGAGTCATGTCAAGGGTGTCTCAAGGGATATGGGGGGAGGTCTGATAATGGTTGGTGAAGGTATTAATGATGCTCCAGCACTTGCAGCTGCAACGGTAGGGATTGTCCTTGCTCAACGTGCTAGTGCAACTGCCACAGCTGTTGCTGATGTGTTGTTGCTGCGTGACAATATATCTGCCGTGCCATTCTGTATTGCCAAGTCTCGCCAAACAACTTCCCTGGTTAAGCAGAATGTAGTCCTTGCTTTAAGCTGTATAGTTTTGGCCTCTCTTCCATCTGTTTTAGGTTTTCTTCCCCTCTGGTTAACGGTTCTATTACATGAAGGCGGTACCCTTCTTGTCTGCCTCAACTCCATCCGTGCTCTAAACCACCCGACATGGAGCTGGAGGCAGGATTTATGGGATTTATTTAACCAACTGAAATCAAGACTCGAATTGTCAAGGAGACTTGCAACGAGCTCAAACCCCACCCAAGCTGCACCTCCGGTATCCTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0003824 GO:0005215 GO:0005385 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006812 GO:0006829 GO:0006873 GO:0006875 GO:0006878 GO:0008150 GO:0008324 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009536 GO:0009628 GO:0009642 GO:0009941 GO:0009987 GO:0015075 GO:0015318 GO:0015633 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019725 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0031967 GO:0031975 GO:0034220 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046915 GO:0046916 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0055065 GO:0055069 GO:0055070 GO:0055076 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0070838 GO:0071577 GO:0072507 GO:0072509 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

E1-E2_ATPase Hydrolase

Protein Analysis

835

Amino Acids

90.3

Weight (kDa)

7.47

Isoelectric Point (pI)

33.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
E1-E2_ATPase	PF00122	261 - 353	8.3e-23	P-type ATPase actuator domain
Hydrolase	PF00702	456 - 701	2.1e-20	haloacid dehalogenase-like hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013554)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37270
fragaria_vesca	FvH4_1g16780 FvH4_1g16780 FvH4_1g16780
malus_domestica	MD02G1179100.v1.1 MD15G1288800.v1.1
prunus_persica	Prupe.6G228900_v2.0.a1
pyrus_communis	pycom02g14510
rosa_chinensis	RchiOBHm_Chr2g0106681
rosa_laevigata	RLG00000017530
rosa_multiflora	Rmu_sc0004000.1_g000005
rosa_roxburghii	Rroxscaffold_2G00136890
rosa_rugosa	Rorug02G0137700
rosa_samantha	Rh2AG188700 Rh2BG199900 Rh2CG193800 Rh2DG195000
rosa_wichuraiana	Rw2G014840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2506
AasI	GACNNNNNNGTC	1 cut(s)	824
AbsI	CCTCGAGG	1 cut(s)	1844
Acc36I	ACCTGC	1 cut(s)	793
Acc65I	GGTACC	2 cut(s)	1535, 2339
AccB1I	GGYRCC	2 cut(s)	1535, 2339
AccB7I	CCANNNNNTGG	1 cut(s)	1436
AccBSI	CCGCTC	1 cut(s)	135
AccI	GTMKAC	1 cut(s)	1566
AccII	CGCG	2 cut(s)	178, 422
AccIII	TCCGGA	2 cut(s)	733, 775
AclWI	GGATC	1 cut(s)	1219
AcoI	YGGCCR	1 cut(s)	1181
AcsI	RAATTY	1 cut(s)	181
AcuI	CTGAAG	2 cut(s)	1070, 2015
AdeI	CACNNNGTG	1 cut(s)	1256
AfaI	GTAC	5 cut(s)	582, 797, 1195, 1537, 2341
AhdI	GACNNNNNGTC	1 cut(s)	1865
AjnI	CCWGG	3 cut(s)	964, 1861, 2229
Alw21I	GWGCWC	5 cut(s)	396, 816, 915, 2374, 2471
Alw26I	GTCTC	7 cut(s)	104, 529, 935, 948, 2035, 2217, 2449
Alw44I	GTGCAC	1 cut(s)	812
AlwI	GGATC	1 cut(s)	1219
AlwNI	CAGNNNCTG	1 cut(s)	1148
Ama87I	CYCGRG	1 cut(s)	1844
Aor13HI	TCCGGA	2 cut(s)	733, 775
AoxI	GGCC	7 cut(s)	1181, 1231, 1278, 1405, 1503, 1853, 2274
ApaLI	GTGCAC	1 cut(s)	812
ApeKI	GCWGC	9 cut(s)	596, 1244, 1517, 1805, 1989, 2096, 2099, 2170, 2486
ApoI	RAATTY	1 cut(s)	181
AseI	ATTAAT	1 cut(s)	2076
Asp700I	GAANNNNTTC	3 cut(s)	335, 491, 771
Asp718I	GGTACC	2 cut(s)	1535, 2339
AspLEI	GCGC	1 cut(s)	424
AspS9I	GGNCC	7 cut(s)	217, 366, 1163, 1231, 1389, 1405, 1504
AsuC2I	CCSGG	2 cut(s)	322, 1626
AsuHPI	GGTGA	9 cut(s)	35, 227, 281, 580, 1242, 1535, 1832, 1940, 2078
AvaI	CYCGRG	1 cut(s)	1844
AvaII	GGWCC	4 cut(s)	217, 366, 1163, 1389
AxyI	CCTNAGG	2 cut(s)	386, 2001
BaeGI	GKGCMC	1 cut(s)	816
BanI	GGYRCC	2 cut(s)	1535, 2339
BanII	GRGCYC	1 cut(s)	2471
Bbv12I	GWGCWC	5 cut(s)	396, 816, 915, 2374, 2471
BbvCI	CCTCAGC	1 cut(s)	675
BbvI	GCAGC	9 cut(s)	608, 1256, 1504, 1792, 2001, 2086, 2108, 2157, 2473
BccI	CCATC	5 cut(s)	291, 357, 980, 2293, 2372
BceAI	ACGGC	4 cut(s)	313, 455, 1168, 2174
BcgI	CGANNNNNNTGC	2 cut(s)	588, 622
BciT130I	CCWGG	3 cut(s)	966, 1863, 2231
BciVI	GTATCC	1 cut(s)	772
BclI	TGATCA	1 cut(s)	1930
BcnI	CCSGG	2 cut(s)	322, 1626
BcoDI	GTCTC	7 cut(s)	104, 529, 935, 948, 2035, 2217, 2449
BfaI	CTAG	7 cut(s)	515, 975, 1343, 1352, 1409, 1637, 2133
BfmI	CTRYAG	5 cut(s)	482, 867, 1266, 1290, 1965
BfuAI	ACCTGC	1 cut(s)	793
BfuI	GTATCC	1 cut(s)	772
Bme1390I	CCNGG	5 cut(s)	322, 966, 1626, 1863, 2231
Bme18I	GGWCC	4 cut(s)	217, 366, 1163, 1389
BmeRI	GACNNNNNGTC	1 cut(s)	1865
BmeT110I	CYCGRG	1 cut(s)	1844
BmgT120I	GGNCC	7 cut(s)	217, 366, 1163, 1231, 1389, 1405, 1504
BmiI	GGNNCC	7 cut(s)	459, 774, 807, 1390, 1406, 1537, 2341
BmrFI	CCNGG	5 cut(s)	322, 966, 1626, 1863, 2231
BmrI	ACTGGG	2 cut(s)	1395, 1410
BmsI	GCATC	8 cut(s)	529, 1256, 1336, 1665, 1703, 1732, 1754, 2071
BmuI	ACTGGG	2 cut(s)	1395, 1410
BoxI	GACNNNNGTC	1 cut(s)	264
BplI	GAGNNNNNCTC	2 cut(s)	206, 238
BpmI	CTGGAG	4 cut(s)	873, 972, 2070, 2416
Bpu10I	CCTNAGC	2 cut(s)	675, 1034
BpuEI	CTTGAG	2 cut(s)	1656, 2017
BpuMI	CCSGG	2 cut(s)	322, 1626
Bsa29I	ATCGAT	1 cut(s)	705
BsaAI	YACGTR	1 cut(s)	454
BsaBI	GATNNNNATC	1 cut(s)	231
BsaJI	CCNNGG	7 cut(s)	213, 262, 295, 606, 886, 1862, 2229
BsaWI	WCCGGW	3 cut(s)	733, 775, 2494
BsaXI	ACNNNNNCTCC	6 cut(s)	105, 135, 147, 177, 846, 876
Bse1I	ACTGG	3 cut(s)	1390, 1405, 1930
Bse21I	CCTNAGG	2 cut(s)	386, 2001
Bse3DI	GCAATG	4 cut(s)	549, 1530, 1878, 1984
Bse8I	GATNNNNATC	1 cut(s)	231
BseAI	TCCGGA	2 cut(s)	733, 775
BseBI	CCWGG	3 cut(s)	966, 1863, 2231
BseCI	ATCGAT	1 cut(s)	705
BseDI	CCNNGG	7 cut(s)	213, 262, 295, 606, 886, 1862, 2229
BseGI	GGATG	5 cut(s)	766, 991, 1745, 1879, 2364
BseJI	GATNNNNATC	1 cut(s)	231
BseMI	GCAATG	4 cut(s)	549, 1530, 1878, 1984
BseMII	CTCAG	5 cut(s)	341, 400, 666, 1992, 2003
BseNI	ACTGG	3 cut(s)	1390, 1405, 1930
BseRI	GAGGAG	3 cut(s)	42, 129, 692
BseSI	GKGCMC	1 cut(s)	816
BseXI	GCAGC	9 cut(s)	608, 1256, 1504, 1792, 2001, 2086, 2108, 2157, 2473
BsgI	GTGCAG	1 cut(s)	2472
Bsh1236I	CGCG	2 cut(s)	178, 422
BshFI	GGCC	7 cut(s)	1183, 1233, 1280, 1407, 1505, 1855, 2276
BshNI	GGYRCC	2 cut(s)	1535, 2339
BshVI	ATCGAT	1 cut(s)	705
BsiHKAI	GWGCWC	5 cut(s)	396, 816, 915, 2374, 2471
BsiHKCI	CYCGRG	1 cut(s)	1844
BsiSI	CCGG	5 cut(s)	321, 734, 776, 1626, 2495
BslFI	GGGAC	2 cut(s)	337, 1402
BsmAI	GTCTC	7 cut(s)	104, 529, 935, 948, 2035, 2217, 2449
BsmBI	CGTCTC	1 cut(s)	104
BsmFI	GGGAC	2 cut(s)	337, 1402
BsmI	GAATGC	3 cut(s)	493, 628, 1777
BsnI	GGCC	7 cut(s)	1183, 1233, 1280, 1407, 1505, 1855, 2276
BsoBI	CYCGRG	1 cut(s)	1844
Bsp1286I	GDGCHC	5 cut(s)	396, 816, 915, 2374, 2471
Bsp13I	TCCGGA	2 cut(s)	733, 775
Bsp143I	GATC	9 cut(s)	226, 232, 253, 498, 702, 1099, 1211, 1755, 1930
BspANI	GGCC	7 cut(s)	1183, 1233, 1280, 1407, 1505, 1855, 2276
BspCNI	CTCAG	5 cut(s)	340, 399, 667, 1993, 2004
BspDI	ATCGAT	1 cut(s)	705
BspEI	TCCGGA	2 cut(s)	733, 775
BspFNI	CGCG	2 cut(s)	178, 422
BspHI	TCATGA	2 cut(s)	495, 1933
BspLI	GGNNCC	7 cut(s)	459, 774, 807, 1390, 1406, 1537, 2341
BspMAI	CTGCAG	2 cut(s)	486, 1294
BspMI	ACCTGC	1 cut(s)	793
BspPI	GGATC	1 cut(s)	1219
BspQI	GCTCTTC	1 cut(s)	1549
BspT107I	GGYRCC	2 cut(s)	1535, 2339
BsrBI	CCGCTC	1 cut(s)	135
BsrDI	GCAATG	4 cut(s)	549, 1530, 1878, 1984
BsrI	ACTGG	3 cut(s)	1390, 1405, 1930
BssECI	CCNNGG	7 cut(s)	213, 262, 295, 606, 886, 1862, 2229
BssMI	GATC	9 cut(s)	226, 232, 253, 498, 702, 1099, 1211, 1755, 1930
BssT1I	CCWWGG	1 cut(s)	886
Bst2UI	CCWGG	3 cut(s)	966, 1863, 2231
Bst4CI	ACNGT	8 cut(s)	266, 1150, 1254, 1648, 1686, 1728, 2107, 2320
Bst6I	CTCTTC	4 cut(s)	60, 198, 1549, 2286
BstAPI	GCANNNNNTGC	2 cut(s)	539, 602
BstBAI	YACGTR	1 cut(s)	454
BstC8I	GCNNGC	5 cut(s)	445, 468, 641, 1112, 1204
BstDEI	CTNAG	6 cut(s)	327, 386, 675, 1034, 2001, 2012
BstDSI	CCRYGG	2 cut(s)	262, 295
BstENI	CCTNNNNNAGG	1 cut(s)	1306
BstF5I	GGATG	5 cut(s)	766, 991, 1745, 1879, 2364
BstFNI	CGCG	2 cut(s)	178, 422
BstHHI	GCGC	1 cut(s)	424
BstKTI	GATC	9 cut(s)	229, 235, 256, 501, 705, 1102, 1214, 1758, 1933
BstMAI	GTCTC	7 cut(s)	104, 529, 935, 948, 2035, 2217, 2449
BstMBI	GATC	9 cut(s)	226, 232, 253, 498, 702, 1099, 1211, 1755, 1930
BstNI	CCWGG	3 cut(s)	966, 1863, 2231
BstPAI	GACNNNNGTC	1 cut(s)	264
BstSCI	CCNGG	5 cut(s)	320, 964, 1624, 1861, 2229
BstSFI	CTRYAG	5 cut(s)	482, 867, 1266, 1290, 1965
BstSLI	GKGCMC	1 cut(s)	816
BstUI	CGCG	2 cut(s)	178, 422
BstV1I	GCAGC	9 cut(s)	608, 1256, 1504, 1792, 2001, 2086, 2108, 2157, 2473
Bsu15I	ATCGAT	1 cut(s)	705
Bsu36I	CCTNAGG	2 cut(s)	386, 2001
BsuI	GTATCC	1 cut(s)	772
BsuRI	GGCC	7 cut(s)	1183, 1233, 1280, 1407, 1505, 1855, 2276
BsuTUI	ATCGAT	1 cut(s)	705
BtgI	CCRYGG	2 cut(s)	262, 295
BtgZI	GCGATG	1 cut(s)	376
BtsCI	GGATG	5 cut(s)	766, 991, 1745, 1879, 2364
BtsIMutI	CAGTG	3 cut(s)	1146, 1724, 1832
BveI	ACCTGC	1 cut(s)	793
Cac8I	GCNNGC	5 cut(s)	445, 468, 641, 1112, 1204
CaiI	CAGNNNCTG	1 cut(s)	1148
CciI	TCATGA	2 cut(s)	495, 1933
CfoI	GCGC	1 cut(s)	424
Cfr13I	GGNCC	7 cut(s)	217, 366, 1163, 1231, 1389, 1405, 1504
ClaI	ATCGAT	1 cut(s)	705
CsiI	ACCWGGT	1 cut(s)	964
Csp6I	GTAC	5 cut(s)	581, 796, 1194, 1536, 2340
CspCI	CAANNNNNGTGG	2 cut(s)	2134, 2169
CviQI	GTAC	5 cut(s)	581, 796, 1194, 1536, 2340
DdeI	CTNAG	6 cut(s)	327, 386, 675, 1034, 2001, 2012
DpnI	GATC	9 cut(s)	228, 234, 255, 500, 704, 1101, 1213, 1757, 1932
DpnII	GATC	9 cut(s)	226, 232, 253, 498, 702, 1099, 1211, 1755, 1930
DraI	TTTAAA	1 cut(s)	1417
DraIII	CACNNNGTG	1 cut(s)	1256
DrdI	GACNNNNNNGTC	1 cut(s)	824
DriI	GACNNNNNGTC	1 cut(s)	1865
DseDI	GACNNNNNNGTC	1 cut(s)	824
EaeI	YGGCCR	1 cut(s)	1181
Eam1104I	CTCTTC	4 cut(s)	60, 198, 1549, 2286
Eam1105I	GACNNNNNGTC	1 cut(s)	1865
EarI	CTCTTC	4 cut(s)	60, 198, 1549, 2286
EciI	GGCGGA	4 cut(s)	113, 196, 315, 406
Ecl136II	GAGCTC	1 cut(s)	2469
Eco130I	CCWWGG	1 cut(s)	886
Eco147I	AGGCCT	1 cut(s)	1855
Eco24I	GRGCYC	1 cut(s)	2471
Eco47I	GGWCC	4 cut(s)	217, 366, 1163, 1389
Eco53kI	GAGCTC	1 cut(s)	2469
Eco57I	CTGAAG	2 cut(s)	1070, 2015
Eco81I	CCTNAGG	2 cut(s)	386, 2001
Eco88I	CYCGRG	1 cut(s)	1844
EcoICRI	GAGCTC	1 cut(s)	2469
EcoNI	CCTNNNNNAGG	1 cut(s)	1306
EcoO109I	RGGNCCY	3 cut(s)	1389, 1405, 1504
EcoRII	CCWGG	3 cut(s)	964, 1861, 2229
EcoT14I	CCWWGG	1 cut(s)	886
EcoT22I	ATGCAT	1 cut(s)	1747
EcoT38I	GRGCYC	1 cut(s)	2471
ErhI	CCWWGG	1 cut(s)	886
Esp3I	CGTCTC	1 cut(s)	104
FalI	AAGNNNNNCTT	2 cut(s)	1683, 1715
FaqI	GGGAC	2 cut(s)	337, 1402
FauI	CCCGC	2 cut(s)	183, 554
FbaI	TGATCA	1 cut(s)	1930
FblI	GTMKAC	1 cut(s)	1566
FokI	GGATG	5 cut(s)	773, 998, 1732, 1886, 2351
FriOI	GRGCYC	1 cut(s)	2471
FspBI	CTAG	7 cut(s)	515, 975, 1343, 1352, 1409, 1637, 2133
GlaI	GCGC	1 cut(s)	423
GsuI	CTGGAG	4 cut(s)	873, 972, 2070, 2416
HaeIII	GGCC	7 cut(s)	1183, 1233, 1280, 1407, 1505, 1855, 2276
HapII	CCGG	5 cut(s)	321, 734, 776, 1626, 2495
HhaI	GCGC	1 cut(s)	424
Hin6I	GCGC	1 cut(s)	422
HinP1I	GCGC	1 cut(s)	422
HincII	GTYRAC	4 cut(s)	1029, 1819, 1923, 2316
HindII	GTYRAC	4 cut(s)	1029, 1819, 1923, 2316
HindIII	AAGCTT	2 cut(s)	14, 1082
HpaI	GTTAAC	2 cut(s)	1923, 2316
HpaII	CCGG	5 cut(s)	321, 734, 776, 1626, 2495
HphI	GGTGA	9 cut(s)	35, 227, 281, 580, 1242, 1535, 1832, 1940, 2078
Hpy166II	GTNNAC	9 cut(s)	220, 571, 814, 1029, 1567, 1682, 1819, 1923, 2316
Hpy188I	TCNGA	9 cut(s)	32, 226, 330, 344, 521, 1089, 1465, 1738, 2055
Hpy8I	GTNNAC	9 cut(s)	220, 571, 814, 1029, 1567, 1682, 1819, 1923, 2316
Hpy99I	CGWCG	1 cut(s)	506
HpyCH4III	ACNGT	8 cut(s)	266, 1150, 1254, 1648, 1686, 1728, 2107, 2320
HpyCH4IV	ACGT	2 cut(s)	453, 2128
HpyF3I	CTNAG	6 cut(s)	327, 386, 675, 1034, 2001, 2012
HpySE526I	ACGT	2 cut(s)	453, 2128
HspAI	GCGC	1 cut(s)	422
Kpn2I	TCCGGA	2 cut(s)	733, 775
KpnI	GGTACC	2 cut(s)	1539, 2343
Ksp22I	TGATCA	1 cut(s)	1930
KspAI	GTTAAC	2 cut(s)	1923, 2316
Kzo9I	GATC	9 cut(s)	226, 232, 253, 498, 702, 1099, 1211, 1755, 1930
LguI	GCTCTTC	1 cut(s)	1549
Lsp1109I	GCAGC	9 cut(s)	608, 1256, 1504, 1792, 2001, 2086, 2108, 2157, 2473
LweI	GCATC	8 cut(s)	529, 1256, 1336, 1665, 1703, 1732, 1754, 2071
MabI	ACCWGGT	1 cut(s)	964
MaeI	CTAG	7 cut(s)	515, 975, 1343, 1352, 1409, 1637, 2133
MaeII	ACGT	2 cut(s)	453, 2128
MaeIII	GTNAC	6 cut(s)	266, 1144, 1361, 1828, 1887, 2174
MalI	GATC	9 cut(s)	228, 234, 255, 500, 704, 1101, 1213, 1757, 1932
MbiI	CCGCTC	1 cut(s)	135
MboI	GATC	9 cut(s)	226, 232, 253, 498, 702, 1099, 1211, 1755, 1930
MfeI	CAATTG	1 cut(s)	1049
MhlI	GDGCHC	5 cut(s)	396, 816, 915, 2374, 2471
MlyI	GAGTC	8 cut(s)	319, 531, 700, 866, 1034, 1946, 2023, 2433
MmeI	TCCRAC	3 cut(s)	499, 826, 1716
Mph1103I	ATGCAT	1 cut(s)	1747
MroI	TCCGGA	2 cut(s)	733, 775
MroXI	GAANNNNTTC	3 cut(s)	335, 491, 771
MseI	TTAA	9 cut(s)	917, 1070, 1416, 1922, 2076, 2235, 2258, 2315, 2421
MslI	CAYNNNNRTG	1 cut(s)	1252
MspA1I	CMGCKG	2 cut(s)	2099, 2150
MspI	CCGG	5 cut(s)	321, 734, 776, 1626, 2495
MspR9I	CCNGG	5 cut(s)	322, 966, 1626, 1863, 2231
MunI	CAATTG	1 cut(s)	1049
Mva1269I	GAATGC	3 cut(s)	493, 628, 1777
MvaI	CCWGG	3 cut(s)	966, 1863, 2231
MvnI	CGCG	2 cut(s)	178, 422
NciI	CCSGG	2 cut(s)	322, 1626
NdeII	GATC	9 cut(s)	226, 232, 253, 498, 702, 1099, 1211, 1755, 1930
NlaIV	GGNNCC	7 cut(s)	459, 774, 807, 1390, 1406, 1537, 2341
NmeAIII	GCCGAG	1 cut(s)	238
NmuCI	GTSAC	4 cut(s)	266, 1144, 1361, 2174
NsiI	ATGCAT	1 cut(s)	1747
PaeR7I	CTCGAG	1 cut(s)	1844
PagI	TCATGA	2 cut(s)	495, 1933
PceI	AGGCCT	1 cut(s)	1855
PciSI	GCTCTTC	1 cut(s)	1549
PctI	GAATGC	3 cut(s)	493, 628, 1777
PdmI	GAANNNNTTC	3 cut(s)	335, 491, 771
PfeI	GAWTC	3 cut(s)	33, 737, 1837
PflMI	CCANNNNNTGG	1 cut(s)	1436
PleI	GAGTC	8 cut(s)	319, 530, 699, 865, 1033, 1945, 2022, 2433
PpsI	GAGTC	8 cut(s)	319, 530, 699, 865, 1033, 1945, 2022, 2433
Ppu21I	YACGTR	1 cut(s)	454
PpuMI	RGGWCCY	1 cut(s)	1389
PshAI	GACNNNNGTC	1 cut(s)	264
PshBI	ATTAAT	1 cut(s)	2076
PsiI	TTATAA	1 cut(s)	2506
Psp124BI	GAGCTC	1 cut(s)	2471
Psp5II	RGGWCCY	1 cut(s)	1389
Psp6I	CCWGG	3 cut(s)	964, 1861, 2229
PspGI	CCWGG	3 cut(s)	964, 1861, 2229
PspN4I	GGNNCC	7 cut(s)	459, 774, 807, 1390, 1406, 1537, 2341
PspPI	GGNCC	7 cut(s)	217, 366, 1163, 1231, 1389, 1405, 1504
PspPPI	RGGWCCY	1 cut(s)	1389
PspXI	VCTCGAGB	1 cut(s)	1844
PstI	CTGCAG	2 cut(s)	486, 1294
PstNI	CAGNNNCTG	1 cut(s)	1148
PvuII	CAGCTG	2 cut(s)	2099, 2150
RsaI	GTAC	5 cut(s)	582, 797, 1195, 1537, 2341
RsaNI	GTAC	5 cut(s)	581, 796, 1194, 1536, 2340
RseI	CAYNNNNRTG	1 cut(s)	1252
SacI	GAGCTC	1 cut(s)	2471
SapI	GCTCTTC	1 cut(s)	1549
SaqAI	TTAA	9 cut(s)	917, 1070, 1416, 1922, 2076, 2235, 2258, 2315, 2421
Sau3AI	GATC	9 cut(s)	226, 232, 253, 498, 702, 1099, 1211, 1755, 1930
Sau96I	GGNCC	7 cut(s)	217, 366, 1163, 1231, 1389, 1405, 1504
SchI	GAGTC	8 cut(s)	319, 531, 700, 866, 1034, 1946, 2023, 2433
ScrFI	CCNGG	5 cut(s)	322, 966, 1626, 1863, 2231
SduI	GDGCHC	5 cut(s)	396, 816, 915, 2374, 2471
SexAI	ACCWGGT	1 cut(s)	964
SfaNI	GCATC	8 cut(s)	529, 1256, 1336, 1665, 1703, 1732, 1754, 2071
SfcI	CTRYAG	5 cut(s)	482, 867, 1266, 1290, 1965
Sfr274I	CTCGAG	1 cut(s)	1844
SinI	GGWCC	4 cut(s)	217, 366, 1163, 1389
SlaI	CTCGAG	1 cut(s)	1844
SmiMI	CAYNNNNRTG	1 cut(s)	1252
SmlI	CTYRAG	3 cut(s)	1671, 1844, 2032
SmoI	CTYRAG	3 cut(s)	1671, 1844, 2032
SseBI	AGGCCT	1 cut(s)	1855
SspMI	CTAG	7 cut(s)	515, 975, 1343, 1352, 1409, 1637, 2133
SstI	GAGCTC	1 cut(s)	2471
StuI	AGGCCT	1 cut(s)	1855
StyD4I	CCNGG	5 cut(s)	320, 964, 1624, 1861, 2229
StyI	CCWWGG	1 cut(s)	886
TaaI	ACNGT	8 cut(s)	266, 1150, 1254, 1648, 1686, 1728, 2107, 2320
TaiI	ACGT	2 cut(s)	456, 2131
TaqI	TCGA	5 cut(s)	705, 1659, 1845, 1858, 2442
TaqII	GACCGA	1 cut(s)	383
TatI	WGTACW	2 cut(s)	580, 795
TauI	GCSGC	8 cut(s)	129, 212, 422, 437, 440, 443, 533, 1523
TfiI	GAWTC	3 cut(s)	33, 737, 1837
Tru1I	TTAA	9 cut(s)	917, 1070, 1416, 1922, 2076, 2235, 2258, 2315, 2421
Tru9I	TTAA	9 cut(s)	917, 1070, 1416, 1922, 2076, 2235, 2258, 2315, 2421
TscAI	CASTG	3 cut(s)	1153, 1731, 1839
TseFI	GTSAC	4 cut(s)	266, 1144, 1361, 2174
TseI	GCWGC	9 cut(s)	596, 1244, 1517, 1805, 1989, 2096, 2099, 2170, 2486
Tsp45I	GTSAC	4 cut(s)	266, 1144, 1361, 2174
TspDTI	ATGAA	9 cut(s)	328, 484, 566, 780, 1177, 1705, 1973, 1992, 2346
TspGWI	ACGGA	3 cut(s)	1800, 1898, 2357
TspRI	CASTG	3 cut(s)	1153, 1731, 1839
Van91I	CCANNNNNTGG	1 cut(s)	1436
VneI	GTGCAC	1 cut(s)	812
VpaK11BI	GGWCC	4 cut(s)	217, 366, 1163, 1389
VspI	ATTAAT	1 cut(s)	2076
XagI	CCTNNNNNAGG	1 cut(s)	1306
XapI	RAATTY	1 cut(s)	181
XhoI	CTCGAG	1 cut(s)	1844
XmiI	GTMKAC	1 cut(s)	1566
XmnI	GAANNNNTTC	3 cut(s)	335, 491, 771
XspI	CTAG	7 cut(s)	515, 975, 1343, 1352, 1409, 1637, 2133
Zsp2I	ATGCAT	1 cut(s)	1747

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.