Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0013554

Physical Location & Seq

Genomic Coordinates Reverse (-)

18079775 .. 18088395

Gene Structure 8621 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ48075

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2514 bp

ATGGAAACCCTAAAGCTTCCAATTTCAATCAGATTCCCCAATCACCACTCTCCTCTTCTCAACCACCACCACCACCCAACCACCACCGCCACTCGTCTCATCTCCCCCAAACCCATTCCCCGCCGCCTCCGCTCTCCTCTCTTTCGGTTCAGACCCTCTCTCCTTTCTCCCCCGCGAAATTTCCCTACTCTTCTTCTTTGCTCCGCCGCCGAGGTCCACTCCGATCACGATCACCACCACCACCACCACCACGACGAGCACGAGCACGGTCACGACCACCACCACCATCATCACCACCACCACGGTGGAGATTGTGCTGAGCTAACCGGGACTCAGAAAGCGTTCATCGGATTTGCAAAGGCTGTGCGATGGACCGACCTCGCCGATTTCCTCAGGGAGCACTTGCATTTGTGTTTCTGCTCCGCCGCGCTGTTCCTCGCCGCCGCCGCTTGCCCTTACGTGCTTCCCAAGCTCGCCGTGAAGCCTCTGCAGAATGCTTTCATGATCGTCGCTTTTCCTCTAGTCGGAGTCTCTGCGGCACTTGATGCAATGACTGACATGAGTGGCGGGAAGGTGAACATTCATGTACTAATGGCTTTGGCAGCATTTGCCTCAGTGTTTATGGGGAATGCTCTTGAAGGAGGCTTGCTTTTGGCTATGTTCAATCTTGCTCATATCGCTGAGGAGTATTTTACCAGTCGCTCCATGATCGATGTGAAGGAGTTGAAAGAAAATTATCCGGATTCTGCCCTTGTTCTGGATATGGATGATGAACAGGTTCCGGATACATCTAATTTGAAGTACAAGCAGGTTCCTGTGCACGACCTACAAGTCGGGTCATATATCTTGGTTGGAGCTGGAGAGTCTGTGCCTGTAGATTGTGAAGTGTTCCAAGGTAGTGCTACCATTACTATCGAGCACTTAACGGGAGAAATTACGCCATTGGAGACAAAAGCTGGAGACATGATACCTGGTGGTGCTAGGAACTTGGATGGCAGGATAATAGTGAAGGCAAGAAAAAATTGGAAAGAGTCAACCCTTAGCAGGATTGTGCAATTGACAGAAGAAGCACAATTAAATAAACCAAAGCTTCAGAGGTGGTTAGATCAGTTTGGCGAGCAATACAGCAAGGCGGTTGTAGTTTTGTCAGTCACTGTTGCTCTACTTGGTCCATTCCTATTCAAGTGGCCGTTCATTGGTACATCAGCTTGCAGAGGATCAGTTTATAGAGCATTGGGCCTCATGGTGGCAGCATCACCGTGTGCTTTGGCTGTAGCTCCATTGGCCTATGCTACTGCAGTTAGCTCCTGTGCAAGGAAGGGTATATTGTTGAAAGGCGGTCATGTGCTAGATGCTCTAGCTTCCTGTCACACTATTGCGTTTGATAAAACTGGGACCTTGACAACTGGGGGACTAGCGTTTAAAGCGATTGAACCAATTTATGGACATCAAGTTAGAAACAATAAATCAGATTTTTCTTCCTGTTGTGTGCCAAGCTGTGAAAAGGAGGCCCTTGCTGTCGCTGCCGCAATGGAGAAGGGTACCACTCACCCTATTGGAAGAGCTGTTGTAGACCATAGTGAAGGGAAAGACCTTCCTTCTGTTTCTGTTGAGAGTTTTGAGTATTTTCCCGGCAGAGGTCTAGTTGCTACTGTTAATGGCATCGAGTTAGGAACTCAAGGGGGTAAACTGTTGAAAGCATCTCTTGGTTCAGTAGATTTCATCACTTCACTGTGTTTGTCAGAAGATGCATCCAAAAAGATCAAGGAAGCTGTGAATGCTTCTTCTTACGGAACTGATTTTGTTCGTGCTGCTCTTTCAGTCGACGAAAAGGTAACACTGATTCACCTCGAGGATAGGCCTCGACCTGGGGTCTTGGATGTCATTGCAGAGTTACAAAATCAAGCAAAGCTCCGTATAATGATGTTAACTGGTGATCATGAGTCAAGTGCTTGGAGAGTTGCAAATGCTGTAGGTATCAATGAAGTTCATTGCAGCCTGAAGCCTGAGGATAAACTGAGTCATGTCAAGGGTGTCTCAAGGGATATGGGGGGAGGTCTGATAATGGTTGGTGAAGGTATTAATGATGCTCCAGCACTTGCAGCTGCAACGGTGGGGATTGTCCTTGCTCAACGTGCTAGTGCAACTGCCACAGCTGTTGCTGATGTGTTGTTGCTGCGTGACAATATATCTGCCGTGCCATTCTGTATTGCCAAGTCTCGCCAAACAACTTCCCTGGTTAAGCAGAATGTAGTCCTTGCTTTAAGCTGTATAGTTTTGGCCTCTCTTCCATCTGTTTTAGGTTTTCTTCCCCTCTGGTTAACGGTTCTATTACATGAAGGCGGTACCCTTCTTGTCTGCCTCAACTCCATCCGTGCTCTAAACCACCCGACATGGAGCTGGAGGCAGGATTTATGGGATTTATTTAACCAACTGAAATCAAGACTCGAATTGTCAAGGAGACTTGCAACGAGCTCAAACCCCACCCAAGCTGCACCTCCGGTATCCTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0003824 GO:0005215 GO:0005385 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006812 GO:0006829 GO:0006873 GO:0006875 GO:0006878 GO:0008150 GO:0008324 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009536 GO:0009628 GO:0009642 GO:0009941 GO:0009987 GO:0015075 GO:0015318 GO:0015633 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019725 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0031967 GO:0031975 GO:0034220 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046915 GO:0046916 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0055065 GO:0055069 GO:0055070 GO:0055076 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0070838 GO:0071577 GO:0072507 GO:0072509 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

E1-E2_ATPase Hydrolase

Protein Analysis

837

Amino Acids

90.55

Weight (kDa)

7.03

Isoelectric Point (pI)

34.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
E1-E2_ATPase	PF00122	263 - 355	5e-23	P-type ATPase actuator domain
Hydrolase	PF00702	458 - 703	2.5e-20	haloacid dehalogenase-like hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013554)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37270
fragaria_vesca	FvH4_1g16780 FvH4_1g16780 FvH4_1g16780
malus_domestica	MD02G1179100.v1.1 MD15G1288800.v1.1
prunus_persica	Prupe.6G228900_v2.0.a1
pyrus_communis	pycom02g14510
rosa_chinensis	RchiOBHm_Chr2g0106681
rosa_laevigata	RLG00000017530
rosa_multiflora	Rmu_sc0004000.1_g000005
rosa_roxburghii	Rroxscaffold_2G00136890
rosa_rugosa	Rorug02G0137700
rosa_samantha	Rh2AG188700 Rh2BG199900 Rh2CG193800 Rh2DG195000
rosa_wichuraiana	Rw2G014840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2512
AasI	GACNNNNNNGTC	1 cut(s)	830
AbsI	CCTCGAGG	1 cut(s)	1850
Acc36I	ACCTGC	1 cut(s)	799
Acc65I	GGTACC	2 cut(s)	1541, 2345
AccB1I	GGYRCC	2 cut(s)	1541, 2345
AccB7I	CCANNNNNTGG	1 cut(s)	1442
AccBSI	CCGCTC	1 cut(s)	132
AccI	GTMKAC	2 cut(s)	1572, 1824
AccII	CGCG	2 cut(s)	175, 428
AccIII	TCCGGA	2 cut(s)	739, 781
AclWI	GGATC	1 cut(s)	1225
AcoI	YGGCCR	1 cut(s)	1187
AcsI	RAATTY	1 cut(s)	178
AcuI	CTGAAG	2 cut(s)	1076, 2021
AdeI	CACNNNGTG	1 cut(s)	1262
AfaI	GTAC	5 cut(s)	588, 803, 1201, 1543, 2347
AfiI	CCNNNNNNNGG	9 cut(s)	524, 757, 1044, 1196, 1246, 1314, 1442, 1637, 1868
AgsI	TTSAA	9 cut(s)	27, 638, 664, 727, 799, 1183, 1333, 1433, 1696
AhdI	GACNNNNNGTC	1 cut(s)	1871
AjnI	CCWGG	3 cut(s)	970, 1867, 2235
AleI	CACNNNNGTG	1 cut(s)	303
Alw21I	GWGCWC	7 cut(s)	261, 267, 402, 822, 921, 2380, 2477
Alw26I	GTCTC	7 cut(s)	101, 535, 941, 954, 2041, 2223, 2455
Alw44I	GTGCAC	1 cut(s)	818
AlwI	GGATC	1 cut(s)	1225
AlwNI	CAGNNNCTG	1 cut(s)	1154
Ama87I	CYCGRG	1 cut(s)	1850
Aor13HI	TCCGGA	2 cut(s)	739, 781
AoxI	GGCC	6 cut(s)	1187, 1237, 1284, 1509, 1859, 2280
ApaLI	GTGCAC	1 cut(s)	818
ApeKI	GCWGC	9 cut(s)	602, 1250, 1523, 1811, 1995, 2102, 2105, 2176, 2492
ApoI	RAATTY	1 cut(s)	178
AseI	ATTAAT	1 cut(s)	2082
Asp700I	GAANNNNTTC	3 cut(s)	341, 497, 777
Asp718I	GGTACC	2 cut(s)	1541, 2345
AspLEI	GCGC	1 cut(s)	430
AspS9I	GGNCC	6 cut(s)	214, 372, 1169, 1237, 1395, 1510
AsuC2I	CCSGG	2 cut(s)	328, 1632
AsuHPI	GGTGA	9 cut(s)	35, 224, 284, 586, 1248, 1541, 1838, 1946, 2084
AvaI	CYCGRG	1 cut(s)	1850
AvaII	GGWCC	4 cut(s)	214, 372, 1169, 1395
AxyI	CCTNAGG	2 cut(s)	392, 2007
BaeGI	GKGCMC	1 cut(s)	822
BanI	GGYRCC	2 cut(s)	1541, 2345
BanII	GRGCYC	1 cut(s)	2477
BauI	CACGAG	1 cut(s)	260
Bbv12I	GWGCWC	7 cut(s)	261, 267, 402, 822, 921, 2380, 2477
BbvCI	CCTCAGC	1 cut(s)	681
BbvI	GCAGC	9 cut(s)	614, 1262, 1510, 1798, 2007, 2092, 2114, 2163, 2479
BccI	CCATC	5 cut(s)	294, 363, 986, 2299, 2378
BceAI	ACGGC	3 cut(s)	461, 1174, 2180
BciT130I	CCWGG	3 cut(s)	972, 1869, 2237
BciVI	GTATCC	1 cut(s)	778
BclI	TGATCA	1 cut(s)	1936
BcnI	CCSGG	2 cut(s)	328, 1632
BcoDI	GTCTC	7 cut(s)	101, 535, 941, 954, 2041, 2223, 2455
BfaI	CTAG	7 cut(s)	521, 981, 1349, 1358, 1415, 1643, 2139
BfmI	CTRYAG	5 cut(s)	488, 873, 1272, 1296, 1971
BfuAI	ACCTGC	1 cut(s)	799
BfuI	GTATCC	1 cut(s)	778
BlpI	GCTNAGC	1 cut(s)	318
Bme1390I	CCNGG	5 cut(s)	328, 972, 1632, 1869, 2237
Bme18I	GGWCC	4 cut(s)	214, 372, 1169, 1395
BmeRI	GACNNNNNGTC	1 cut(s)	1871
BmeT110I	CYCGRG	1 cut(s)	1850
BmgT120I	GGNCC	6 cut(s)	214, 372, 1169, 1237, 1395, 1510
BmiI	GGNNCC	5 cut(s)	780, 813, 1396, 1543, 2347
BmrFI	CCNGG	5 cut(s)	328, 972, 1632, 1869, 2237
BmrI	ACTGGG	2 cut(s)	1401, 1416
BmsI	GCATC	8 cut(s)	535, 1262, 1342, 1671, 1709, 1738, 1760, 2077
BmuI	ACTGGG	2 cut(s)	1401, 1416
BplI	GAGNNNNNCTC	2 cut(s)	203, 235
BpmI	CTGGAG	4 cut(s)	879, 978, 2076, 2422
Bpu10I	CCTNAGC	2 cut(s)	681, 1040
Bpu1102I	GCTNAGC	1 cut(s)	318
BpuEI	CTTGAG	2 cut(s)	1662, 2023
BpuMI	CCSGG	2 cut(s)	328, 1632
Bsa29I	ATCGAT	1 cut(s)	711
BsaAI	YACGTR	1 cut(s)	460
BsaBI	GATNNNNATC	1 cut(s)	228
BsaJI	CCNNGG	5 cut(s)	210, 301, 892, 1868, 2235
BsaWI	WCCGGW	3 cut(s)	739, 781, 2500
BsaXI	ACNNNNNCTCC	4 cut(s)	144, 174, 852, 882
Bsc4I	CCNNNNNNNGG	9 cut(s)	524, 757, 1044, 1196, 1246, 1314, 1442, 1637, 1868
Bse1I	ACTGG	4 cut(s)	696, 1396, 1411, 1936
Bse21I	CCTNAGG	2 cut(s)	392, 2007
Bse3DI	GCAATG	4 cut(s)	555, 1536, 1884, 1990
Bse8I	GATNNNNATC	1 cut(s)	228
BseAI	TCCGGA	2 cut(s)	739, 781
BseBI	CCWGG	3 cut(s)	972, 1869, 2237
BseCI	ATCGAT	1 cut(s)	711
BseDI	CCNNGG	5 cut(s)	210, 301, 892, 1868, 2235
BseGI	GGATG	5 cut(s)	772, 997, 1751, 1885, 2370
BseJI	GATNNNNATC	1 cut(s)	228
BseLI	CCNNNNNNNGG	9 cut(s)	524, 757, 1044, 1196, 1246, 1314, 1442, 1637, 1868
BseMI	GCAATG	4 cut(s)	555, 1536, 1884, 1990
BseMII	CTCAG	7 cut(s)	309, 347, 406, 627, 672, 1998, 2009
BseNI	ACTGG	4 cut(s)	696, 1396, 1411, 1936
BseRI	GAGGAG	3 cut(s)	42, 126, 698
BseSI	GKGCMC	1 cut(s)	822
BseXI	GCAGC	9 cut(s)	614, 1262, 1510, 1798, 2007, 2092, 2114, 2163, 2479
BsgI	GTGCAG	1 cut(s)	2478
Bsh1236I	CGCG	2 cut(s)	175, 428
BshFI	GGCC	6 cut(s)	1189, 1239, 1286, 1511, 1861, 2282
BshNI	GGYRCC	2 cut(s)	1541, 2345
BshVI	ATCGAT	1 cut(s)	711
BsiHKAI	GWGCWC	7 cut(s)	261, 267, 402, 822, 921, 2380, 2477
BsiHKCI	CYCGRG	1 cut(s)	1850
BsiSI	CCGG	5 cut(s)	327, 740, 782, 1632, 2501
BslFI	GGGAC	3 cut(s)	343, 1408, 1425
BslI	CCNNNNNNNGG	9 cut(s)	524, 757, 1044, 1196, 1246, 1314, 1442, 1637, 1868
BsmAI	GTCTC	7 cut(s)	101, 535, 941, 954, 2041, 2223, 2455
BsmBI	CGTCTC	1 cut(s)	101
BsmFI	GGGAC	3 cut(s)	343, 1408, 1425
BsmI	GAATGC	3 cut(s)	499, 634, 1783
BsnI	GGCC	6 cut(s)	1189, 1239, 1286, 1511, 1861, 2282
BsoBI	CYCGRG	1 cut(s)	1850
Bsp1286I	GDGCHC	7 cut(s)	261, 267, 402, 822, 921, 2380, 2477
Bsp13I	TCCGGA	2 cut(s)	739, 781
Bsp143I	GATC	8 cut(s)	223, 229, 504, 708, 1105, 1217, 1761, 1936
Bsp1720I	GCTNAGC	1 cut(s)	318
BspANI	GGCC	6 cut(s)	1189, 1239, 1286, 1511, 1861, 2282
BspCNI	CTCAG	7 cut(s)	310, 346, 405, 626, 673, 1999, 2010
BspDI	ATCGAT	1 cut(s)	711
BspEI	TCCGGA	2 cut(s)	739, 781
BspFNI	CGCG	2 cut(s)	175, 428
BspHI	TCATGA	2 cut(s)	501, 1939
BspLI	GGNNCC	5 cut(s)	780, 813, 1396, 1543, 2347
BspMAI	CTGCAG	2 cut(s)	492, 1300
BspMI	ACCTGC	1 cut(s)	799
BspPI	GGATC	1 cut(s)	1225
BspQI	GCTCTTC	1 cut(s)	1555
BspT107I	GGYRCC	2 cut(s)	1541, 2345
BsrBI	CCGCTC	1 cut(s)	132
BsrDI	GCAATG	4 cut(s)	555, 1536, 1884, 1990
BsrI	ACTGG	4 cut(s)	696, 1396, 1411, 1936
BssECI	CCNNGG	5 cut(s)	210, 301, 892, 1868, 2235
BssMI	GATC	8 cut(s)	223, 229, 504, 708, 1105, 1217, 1761, 1936
BssSI	CACGAG	1 cut(s)	260
BssT1I	CCWWGG	1 cut(s)	892
Bst2BI	CACGAG	1 cut(s)	260
Bst2UI	CCWGG	3 cut(s)	972, 1869, 2237
Bst4CI	ACNGT	9 cut(s)	269, 305, 1156, 1260, 1654, 1692, 1734, 2113, 2326
Bst6I	CTCTTC	4 cut(s)	60, 195, 1555, 2292
BstAPI	GCANNNNNTGC	2 cut(s)	545, 608
BstBAI	YACGTR	1 cut(s)	460
BstC8I	GCNNGC	5 cut(s)	451, 474, 647, 1118, 1210
BstDEI	CTNAG	8 cut(s)	318, 333, 392, 613, 681, 1040, 2007, 2018
BstDSI	CCRYGG	1 cut(s)	301
BstENI	CCTNNNNNAGG	1 cut(s)	1312
BstF5I	GGATG	5 cut(s)	772, 997, 1751, 1885, 2370
BstFNI	CGCG	2 cut(s)	175, 428
BstHHI	GCGC	1 cut(s)	430
BstKTI	GATC	8 cut(s)	226, 232, 507, 711, 1108, 1220, 1764, 1939
BstMAI	GTCTC	7 cut(s)	101, 535, 941, 954, 2041, 2223, 2455
BstMBI	GATC	8 cut(s)	223, 229, 504, 708, 1105, 1217, 1761, 1936
BstNI	CCWGG	3 cut(s)	972, 1869, 2237
BstSCI	CCNGG	5 cut(s)	326, 970, 1630, 1867, 2235
BstSFI	CTRYAG	5 cut(s)	488, 873, 1272, 1296, 1971
BstSLI	GKGCMC	1 cut(s)	822
BstUI	CGCG	2 cut(s)	175, 428
BstV1I	GCAGC	9 cut(s)	614, 1262, 1510, 1798, 2007, 2092, 2114, 2163, 2479
BstXI	CCANNNNNNTGG	1 cut(s)	305
Bsu15I	ATCGAT	1 cut(s)	711
Bsu36I	CCTNAGG	2 cut(s)	392, 2007
BsuI	GTATCC	1 cut(s)	778
BsuRI	GGCC	6 cut(s)	1189, 1239, 1286, 1511, 1861, 2282
BsuTUI	ATCGAT	1 cut(s)	711
BtgI	CCRYGG	1 cut(s)	301
BtgZI	GCGATG	1 cut(s)	382
BtsCI	GGATG	5 cut(s)	772, 997, 1751, 1885, 2370
BtsIMutI	CAGTG	4 cut(s)	621, 1152, 1730, 1838
BveI	ACCTGC	1 cut(s)	799
Cac8I	GCNNGC	5 cut(s)	451, 474, 647, 1118, 1210
CaiI	CAGNNNCTG	1 cut(s)	1154
CciI	TCATGA	2 cut(s)	501, 1939
CfoI	GCGC	1 cut(s)	430
Cfr13I	GGNCC	6 cut(s)	214, 372, 1169, 1237, 1395, 1510
ClaI	ATCGAT	1 cut(s)	711
CsiI	ACCWGGT	1 cut(s)	970
Csp6I	GTAC	5 cut(s)	587, 802, 1200, 1542, 2346
CspCI	CAANNNNNGTGG	2 cut(s)	2140, 2175
CviQI	GTAC	5 cut(s)	587, 802, 1200, 1542, 2346
DdeI	CTNAG	8 cut(s)	318, 333, 392, 613, 681, 1040, 2007, 2018
DpnI	GATC	8 cut(s)	225, 231, 506, 710, 1107, 1219, 1763, 1938
DpnII	GATC	8 cut(s)	223, 229, 504, 708, 1105, 1217, 1761, 1936
DraI	TTTAAA	1 cut(s)	1423
DraIII	CACNNNGTG	1 cut(s)	1262
DrdI	GACNNNNNNGTC	1 cut(s)	830
DriI	GACNNNNNGTC	1 cut(s)	1871
DseDI	GACNNNNNNGTC	1 cut(s)	830
EaeI	YGGCCR	1 cut(s)	1187
Eam1104I	CTCTTC	4 cut(s)	60, 195, 1555, 2292
Eam1105I	GACNNNNNGTC	1 cut(s)	1871
EarI	CTCTTC	4 cut(s)	60, 195, 1555, 2292
EciI	GGCGGA	2 cut(s)	193, 412
Ecl136II	GAGCTC	1 cut(s)	2475
Eco130I	CCWWGG	1 cut(s)	892
Eco147I	AGGCCT	1 cut(s)	1861
Eco24I	GRGCYC	1 cut(s)	2477
Eco47I	GGWCC	4 cut(s)	214, 372, 1169, 1395
Eco53kI	GAGCTC	1 cut(s)	2475
Eco57I	CTGAAG	2 cut(s)	1076, 2021
Eco81I	CCTNAGG	2 cut(s)	392, 2007
Eco88I	CYCGRG	1 cut(s)	1850
EcoICRI	GAGCTC	1 cut(s)	2475
EcoNI	CCTNNNNNAGG	1 cut(s)	1312
EcoO109I	RGGNCCY	2 cut(s)	1395, 1510
EcoRII	CCWGG	3 cut(s)	970, 1867, 2235
EcoT14I	CCWWGG	1 cut(s)	892
EcoT22I	ATGCAT	1 cut(s)	1753
EcoT38I	GRGCYC	1 cut(s)	2477
ErhI	CCWWGG	1 cut(s)	892
Esp3I	CGTCTC	1 cut(s)	101
FalI	AAGNNNNNCTT	2 cut(s)	1689, 1721
FaqI	GGGAC	3 cut(s)	343, 1408, 1425
FauI	CCCGC	3 cut(s)	128, 180, 560
FbaI	TGATCA	1 cut(s)	1936
FblI	GTMKAC	2 cut(s)	1572, 1824
FokI	GGATG	5 cut(s)	779, 1004, 1738, 1892, 2357
FriOI	GRGCYC	1 cut(s)	2477
FspBI	CTAG	7 cut(s)	521, 981, 1349, 1358, 1415, 1643, 2139
GlaI	GCGC	1 cut(s)	429
GsuI	CTGGAG	4 cut(s)	879, 978, 2076, 2422
HaeIII	GGCC	6 cut(s)	1189, 1239, 1286, 1511, 1861, 2282
HapII	CCGG	5 cut(s)	327, 740, 782, 1632, 2501
HhaI	GCGC	1 cut(s)	430
Hin6I	GCGC	1 cut(s)	428
HinP1I	GCGC	1 cut(s)	428
HincII	GTYRAC	4 cut(s)	1035, 1825, 1929, 2322
HindII	GTYRAC	4 cut(s)	1035, 1825, 1929, 2322
HindIII	AAGCTT	2 cut(s)	14, 1088
HpaI	GTTAAC	2 cut(s)	1929, 2322
HpaII	CCGG	5 cut(s)	327, 740, 782, 1632, 2501
HphI	GGTGA	9 cut(s)	35, 224, 284, 586, 1248, 1541, 1838, 1946, 2084
Hpy166II	GTNNAC	9 cut(s)	217, 577, 820, 1035, 1573, 1688, 1825, 1929, 2322
Hpy188III	TCNNGA	9 cut(s)	227, 272, 502, 635, 740, 758, 782, 1940, 2442
Hpy8I	GTNNAC	9 cut(s)	217, 577, 820, 1035, 1573, 1688, 1825, 1929, 2322
Hpy99I	CGWCG	3 cut(s)	257, 512, 1829
HpyCH4III	ACNGT	9 cut(s)	269, 305, 1156, 1260, 1654, 1692, 1734, 2113, 2326
HpyCH4IV	ACGT	2 cut(s)	459, 2134
HpyF3I	CTNAG	8 cut(s)	318, 333, 392, 613, 681, 1040, 2007, 2018
HpySE526I	ACGT	2 cut(s)	459, 2134
HspAI	GCGC	1 cut(s)	428
Kpn2I	TCCGGA	2 cut(s)	739, 781
KpnI	GGTACC	2 cut(s)	1545, 2349
Ksp22I	TGATCA	1 cut(s)	1936
KspAI	GTTAAC	2 cut(s)	1929, 2322
Kzo9I	GATC	8 cut(s)	223, 229, 504, 708, 1105, 1217, 1761, 1936
LguI	GCTCTTC	1 cut(s)	1555
Lsp1109I	GCAGC	9 cut(s)	614, 1262, 1510, 1798, 2007, 2092, 2114, 2163, 2479
LweI	GCATC	8 cut(s)	535, 1262, 1342, 1671, 1709, 1738, 1760, 2077
MabI	ACCWGGT	1 cut(s)	970
MaeI	CTAG	7 cut(s)	521, 981, 1349, 1358, 1415, 1643, 2139
MaeII	ACGT	2 cut(s)	459, 2134
MaeIII	GTNAC	6 cut(s)	269, 1150, 1367, 1834, 1893, 2180
MalI	GATC	8 cut(s)	225, 231, 506, 710, 1107, 1219, 1763, 1938
MbiI	CCGCTC	1 cut(s)	132
MboI	GATC	8 cut(s)	223, 229, 504, 708, 1105, 1217, 1761, 1936
MfeI	CAATTG	1 cut(s)	1055
MhlI	GDGCHC	7 cut(s)	261, 267, 402, 822, 921, 2380, 2477
MlyI	GAGTC	7 cut(s)	325, 537, 872, 1040, 1952, 2029, 2439
MmeI	TCCRAC	2 cut(s)	505, 832
Mph1103I	ATGCAT	1 cut(s)	1753
MroI	TCCGGA	2 cut(s)	739, 781
MroXI	GAANNNNTTC	3 cut(s)	341, 497, 777
MslI	CAYNNNNRTG	2 cut(s)	303, 1258
MspA1I	CMGCKG	2 cut(s)	2105, 2156
MspI	CCGG	5 cut(s)	327, 740, 782, 1632, 2501
MspR9I	CCNGG	5 cut(s)	328, 972, 1632, 1869, 2237
MunI	CAATTG	1 cut(s)	1055
Mva1269I	GAATGC	3 cut(s)	499, 634, 1783
MvaI	CCWGG	3 cut(s)	972, 1869, 2237
MvnI	CGCG	2 cut(s)	175, 428
NciI	CCSGG	2 cut(s)	328, 1632
NdeII	GATC	8 cut(s)	223, 229, 504, 708, 1105, 1217, 1761, 1936
NlaIV	GGNNCC	5 cut(s)	780, 813, 1396, 1543, 2347
NmeAIII	GCCGAG	1 cut(s)	235
NmuCI	GTSAC	4 cut(s)	269, 1150, 1367, 2180
NsiI	ATGCAT	1 cut(s)	1753
OliI	CACNNNNGTG	1 cut(s)	303
PaeR7I	CTCGAG	1 cut(s)	1850
PagI	TCATGA	2 cut(s)	501, 1939
PceI	AGGCCT	1 cut(s)	1861
PciSI	GCTCTTC	1 cut(s)	1555
PcsI	WCGNNNNNNNCGW	1 cut(s)	258
PctI	GAATGC	3 cut(s)	499, 634, 1783
PdmI	GAANNNNTTC	3 cut(s)	341, 497, 777
PfeI	GAWTC	3 cut(s)	33, 743, 1843
PflMI	CCANNNNNTGG	1 cut(s)	1442
PleI	GAGTC	7 cut(s)	325, 536, 871, 1039, 1951, 2028, 2439
PpsI	GAGTC	7 cut(s)	325, 536, 871, 1039, 1951, 2028, 2439
Ppu21I	YACGTR	1 cut(s)	460
PpuMI	RGGWCCY	1 cut(s)	1395
PshBI	ATTAAT	1 cut(s)	2082
PsiI	TTATAA	1 cut(s)	2512
Psp124BI	GAGCTC	1 cut(s)	2477
Psp5II	RGGWCCY	1 cut(s)	1395
Psp6I	CCWGG	3 cut(s)	970, 1867, 2235
PspGI	CCWGG	3 cut(s)	970, 1867, 2235
PspN4I	GGNNCC	5 cut(s)	780, 813, 1396, 1543, 2347
PspPI	GGNCC	6 cut(s)	214, 372, 1169, 1237, 1395, 1510
PspPPI	RGGWCCY	1 cut(s)	1395
PspXI	VCTCGAGB	1 cut(s)	1850
PstI	CTGCAG	2 cut(s)	492, 1300
PstNI	CAGNNNCTG	1 cut(s)	1154
PvuII	CAGCTG	2 cut(s)	2105, 2156
RsaI	GTAC	5 cut(s)	588, 803, 1201, 1543, 2347
RsaNI	GTAC	5 cut(s)	587, 802, 1200, 1542, 2346
RseI	CAYNNNNRTG	2 cut(s)	303, 1258
SacI	GAGCTC	1 cut(s)	2477
SalI	GTCGAC	1 cut(s)	1823
SapI	GCTCTTC	1 cut(s)	1555
Sau3AI	GATC	8 cut(s)	223, 229, 504, 708, 1105, 1217, 1761, 1936
Sau96I	GGNCC	6 cut(s)	214, 372, 1169, 1237, 1395, 1510
SchI	GAGTC	7 cut(s)	325, 537, 872, 1040, 1952, 2029, 2439
ScrFI	CCNGG	5 cut(s)	328, 972, 1632, 1869, 2237
SduI	GDGCHC	7 cut(s)	261, 267, 402, 822, 921, 2380, 2477
SexAI	ACCWGGT	1 cut(s)	970
SfaNI	GCATC	8 cut(s)	535, 1262, 1342, 1671, 1709, 1738, 1760, 2077
SfcI	CTRYAG	5 cut(s)	488, 873, 1272, 1296, 1971
Sfr274I	CTCGAG	1 cut(s)	1850
SinI	GGWCC	4 cut(s)	214, 372, 1169, 1395
SlaI	CTCGAG	1 cut(s)	1850
SmiMI	CAYNNNNRTG	2 cut(s)	303, 1258
SmlI	CTYRAG	3 cut(s)	1677, 1850, 2038
SmoI	CTYRAG	3 cut(s)	1677, 1850, 2038
SseBI	AGGCCT	1 cut(s)	1861
SspMI	CTAG	7 cut(s)	521, 981, 1349, 1358, 1415, 1643, 2139
SstI	GAGCTC	1 cut(s)	2477
StuI	AGGCCT	1 cut(s)	1861
StyD4I	CCNGG	5 cut(s)	326, 970, 1630, 1867, 2235
StyI	CCWWGG	1 cut(s)	892
TaaI	ACNGT	9 cut(s)	269, 305, 1156, 1260, 1654, 1692, 1734, 2113, 2326
TaiI	ACGT	2 cut(s)	462, 2137
TaqI	TCGA	7 cut(s)	711, 915, 1665, 1824, 1851, 1864, 2448
TaqII	GACCGA	1 cut(s)	389
TatI	WGTACW	2 cut(s)	586, 801
TauI	GCSGC	8 cut(s)	126, 209, 428, 443, 446, 449, 539, 1529
TfiI	GAWTC	3 cut(s)	33, 743, 1843
TscAI	CASTG	4 cut(s)	621, 1159, 1737, 1845
TseFI	GTSAC	4 cut(s)	269, 1150, 1367, 2180
TseI	GCWGC	9 cut(s)	602, 1250, 1523, 1811, 1995, 2102, 2105, 2176, 2492
Tsp45I	GTSAC	4 cut(s)	269, 1150, 1367, 2180
TspDTI	ATGAA	9 cut(s)	334, 490, 572, 786, 1183, 1711, 1979, 1998, 2352
TspGWI	ACGGA	3 cut(s)	1806, 1904, 2363
TspRI	CASTG	4 cut(s)	621, 1159, 1737, 1845
Van91I	CCANNNNNTGG	1 cut(s)	1442
VneI	GTGCAC	1 cut(s)	818
VpaK11BI	GGWCC	4 cut(s)	214, 372, 1169, 1395
VspI	ATTAAT	1 cut(s)	2082
XagI	CCTNNNNNAGG	1 cut(s)	1312
XapI	RAATTY	1 cut(s)	178
XcmI	CCANNNNNNNNNTGG	1 cut(s)	302
XhoI	CTCGAG	1 cut(s)	1850
XmiI	GTMKAC	2 cut(s)	1572, 1824
XmnI	GAANNNNTTC	3 cut(s)	341, 497, 777
XspI	CTAG	7 cut(s)	521, 981, 1349, 1358, 1415, 1643, 2139
Zsp2I	ATGCAT	1 cut(s)	1753

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.