Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0013554

Physical Location & Seq

Genomic Coordinates Forward (+)

23252349 .. 23258077

Gene Structure 5729 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G228900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2478 bp

ATGGAAAGCCTCCTACATTTTCCAATTCCAATCAGAGCCAGCAACCACCACCACTCTCTTCTTCTGAGTCATCACCCCACCACAACTCGACTCAACTCGCCCTCCTCCCCAAAACCCATCATCCGCGCTCCCCTCTTTCGCTTCAAACCCCTTCCTCCTCTCCGCAATTCCACCACTCTCCGATGCACCGCCTACGCATGCGATCACGATCACCACCACCACGACCATCACCACCACCACCATCATCATCATCACCATGGCTCTGATGAGCTCACCGGACCTCAGAAACAGTTCGTCCGATTCGCCAAGGCAGTACGTTGGACCGACCTCGCCGATTTCCTCAGGGAGCACTTGCAGTTGTGCTTCTGCTCCACCACTCTCTTTCTCGCAGCCGCTGCCTGCCCTTATTTGATGCCCAAGCTCGCCGTGAAGCCTATGCAGAACGCTTTCATACTCATCGCTTTTCCTCTAGTAGGGGTCTCTGCTGCACTTGACGCGCTGACAGATATTAGTGGTGGGAAGGTGAACATTCATGTATTAATGGCTTTAGCGGCCTTTGCTTCCGTGTTCATGGGGAATGCACTGGAAGGAGGGTTACTGTTGGCAATGTTCAATCTTGCTCATATCGCTGAGGAGTATTTCACCAGTCGTTCCATGATCGATGTGAAAGAGTTGAAAGAAAATTATCCGGATTTCGCTCTTGTGCTTGACATCAATGATGAAGAACTTCCCAATACATCTAATTTGGCGTACAAGCAGGTTCCTGTGCACGACATACAAGTGGGGTCGTTTATCTTGGTCGGAGCTGGCGAGTCTGTGCCTGTAGATTGTGAAGTTTTCCAAGGTAATGCCACCATTACCATTGAGCACTTGACAGGAGAAATTAAACCATTGGAGACAACAGTTGGAGACAGGGTACCTGGTGGTGCAAGGAACTTGGATGGCAGGATAATAGTGAAGGCAACAAAAACTTGGAAAGAGTCAACCCTTAGCAGGATTGTGCAATTGACTGAAGAAGCACAACTGAATAAACCAAAGCTTCAGAGGTGGCTGGATCAGTTTGGCGAGCAATACAGCAAGGTGGTTGTAGTTTTGTCAGCTGCTATTGCTCTTCTTGGTCCATTCCTATTCAAGTGGCCATTTATTGGTACATCAGCTTGTAGAGGGTCAGTTTATAGAGCATTGGGCCTCATGGTGGCAGCATCACCATGTGCTTTGGCTGTAGCTCCGTTGGCATATGCTACTGCAATTAGCTCCTGCGCAAAGAAGGGGATATTGCTGAAAGGTGGCCATGTGCTAGATGCTCTAGCTTCTTGTCACACAATTGCATTTGATAAAACTGGGACCTTGACAACTGGGGGGCTAGCGTTCAAAGCAATTGAACCAATTTACGGGCACCGGATGACAAACAATATATCAGATTTTTCTTCCTGTTGTGCCCCCAGCTGTGAAAAGGAGGCCCTTGCTGTTGCTGCTGCAATGGAGAAGGGCACCACTCACCCTATTGGAAGAGCTGTGGTAGACCATAGTGAAGGGAAAGACCTTCCTTCTGTTTCTGTTGAGAGTTTCGAGTACTTTCCAGGCAGAGGACTAATTGCTACTCTCAATGGCATAGAGTTAGGAACTGGAGGGGATAAACTGTTGAAAGCATCTCTTGGTTCAGTAGATTTCATCACCTCACTTTGTAGATCGGAGGATGCATCAAAAAAGATCAAGGAAGCTGTGAATGCATCTTCTTATGGAACTGAATTTGTTCGTGCTGCTCTTTCAGTCAACGAAAAGGTAACGCTGATTCACCTTGAGGACAGGCCTCGACCTGGGGTCTCGGATGTCATAGAAGAGTTACGAGATGAAGCCAAGCTCCGTGTAATGATGCTGACTGGTGACCATGAGTCAAGTGCATGGAGAGTTGCAAATGCCGTAGGTATCAATGAAGTTTATTCTAGCCTGAAGCCTGAGGATAAGCTGAGTCATGTTAAGGATGTCTCAAGGGATATGGGTGGAGGTCTGATAATGGTGGGTGAAGGTATTAATGATGCTCCAGCACTTGCAGCAGCCACTGTGGGGATAGTCCTTGCCCAACGTGCTAGTGCAACTGCCACAGCTGTTGCAGATGTATTGTTGCTGCGGGACAATATATCGGTTGTACCATTCTGTATCGCTAAGTCTCGCCAAACAACTTCCCTGGTGAAGCAGAGTGTAGGCCTTGCTTTATCTTGTATAGTTTTGGCCTCTCTTCCATCTGTTTTAGGATTTCTTCCCCTCTGGTTAACGGTTCTATTACATGAAGGCGGTACCCTTGTTGTTTGCCTCAATTCTATCCGTGCTCTAAACCACCCAACATGGTCCTGGAGGCAGGATTTGTGGCATTTGGTTTGCGAACTGAAATCTAGACTCGTATTACCGAAGAAACTCAATACCAGCTCAAACACTGCCCAACCTGCAGTTGAGCAACTTCGGCACTCTCACCCCTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0003824 GO:0005215 GO:0005385 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006812 GO:0006829 GO:0006873 GO:0006875 GO:0006878 GO:0008150 GO:0008324 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009536 GO:0009628 GO:0009642 GO:0009941 GO:0009987 GO:0015075 GO:0015318 GO:0015633 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019725 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0031967 GO:0031975 GO:0034220 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046915 GO:0046916 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0055065 GO:0055069 GO:0055070 GO:0055076 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0070838 GO:0071577 GO:0072507 GO:0072509 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

E1-E2_ATPase Hydrolase

Protein Analysis

826

Amino Acids

89.4

Weight (kDa)

7.11

Isoelectric Point (pI)

36.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013554)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37270
fragaria_vesca	FvH4_1g16780 FvH4_1g16780 FvH4_1g16780
malus_domestica	MD02G1179100.v1.1 MD15G1288800.v1.1
prunus_persica	Prupe.6G228900_v2.0.a1
pyrus_communis	pycom02g14510
rosa_chinensis	RchiOBHm_Chr2g0106681
rosa_laevigata	RLG00000017530
rosa_multiflora	Rmu_sc0004000.1_g000005
rosa_roxburghii	Rroxscaffold_2G00136890
rosa_rugosa	Rorug02G0137700
rosa_samantha	Rh2AG188700 Rh2BG199900 Rh2CG193800 Rh2DG195000
rosa_wichuraiana	Rw2G014840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2476
Acc16I	TGCGCA	1 cut(s)	1261
Acc36I	ACCTGC	2 cut(s)	748, 2449
Acc65I	GGTACC	2 cut(s)	916, 2294
AccB1I	GGYRCC	4 cut(s)	916, 1395, 1490, 2294
AccB7I	CCANNNNNTGG	1 cut(s)	1145
AccI	GTMKAC	1 cut(s)	1521
AccII	CGCG	2 cut(s)	126, 497
AccIII	TCCGGA	1 cut(s)	688
AciI	CCGC	7 cut(s)	124, 163, 189, 393, 551, 2128, 2292
AclWI	GGATC	1 cut(s)	1062
AcoI	YGGCCR	2 cut(s)	1136, 1288
AcsI	RAATTY	1 cut(s)	1748
AcuI	CTGAAG	3 cut(s)	1025, 1032, 1970
AdeI	CACNNNGTG	1 cut(s)	1211
AfaI	GTAC	7 cut(s)	315, 752, 918, 1150, 1574, 2148, 2296
AfiI	CCNNNNNNNGG	8 cut(s)	473, 993, 1145, 1195, 1391, 1586, 1817, 2064
AgsI	TTSAA	7 cut(s)	145, 613, 676, 1132, 1372, 1382, 1645
AhdI	GACNNNNNGTC	2 cut(s)	1820, 1891
AjnI	CCWGG	5 cut(s)	919, 1579, 1816, 2184, 2348
Alw21I	GWGCWC	5 cut(s)	273, 351, 771, 870, 2329
Alw26I	GTCTC	6 cut(s)	484, 890, 903, 1828, 1990, 2172
Alw44I	GTGCAC	1 cut(s)	767
AlwI	GGATC	1 cut(s)	1062
AlwNI	CAGNNNCTG	2 cut(s)	395, 2060
Aor13HI	TCCGGA	1 cut(s)	688
AoxI	GGCC	8 cut(s)	552, 1136, 1186, 1288, 1458, 1808, 2203, 2229
ApaLI	GTGCAC	1 cut(s)	767
ApoI	RAATTY	1 cut(s)	1748
AseI	ATTAAT	2 cut(s)	539, 2031
Asp700I	GAANNNNTTC	4 cut(s)	290, 446, 726, 1752
Asp718I	GGTACC	2 cut(s)	916, 2294
AspLEI	GCGC	3 cut(s)	128, 499, 1262
AspS9I	GGNCC	7 cut(s)	278, 321, 1118, 1186, 1344, 1459, 2346
AsuNHI	GCTAGC	1 cut(s)	1363
AvaII	GGWCC	5 cut(s)	278, 321, 1118, 1344, 2346
AxyI	CCTNAGG	2 cut(s)	341, 1956
BaeGI	GKGCMC	4 cut(s)	771, 1398, 1441, 1493
BaeI	ACNNNNGTAYC	2 cut(s)	2286, 2319
BalI	TGGCCA	2 cut(s)	1138, 1290
BanI	GGYRCC	4 cut(s)	916, 1395, 1490, 2294
BanII	GRGCYC	1 cut(s)	273
BarI	GAAGNNNNNNTAC	2 cut(s)	579, 611
Bbv12I	GWGCWC	5 cut(s)	273, 351, 771, 870, 2329
BbvCI	CCTCAGC	1 cut(s)	630
BccI	CCATC	5 cut(s)	125, 234, 249, 935, 2248
BceAI	ACGGC	2 cut(s)	410, 1904
BciT130I	CCWGG	5 cut(s)	921, 1581, 1818, 2186, 2350
BcoDI	GTCTC	6 cut(s)	484, 890, 903, 1828, 1990, 2172
BfaI	CTAG	7 cut(s)	470, 1298, 1307, 1364, 1944, 2088, 2391
BfmI	CTRYAG	3 cut(s)	822, 1221, 2442
BfuAI	ACCTGC	2 cut(s)	748, 2449
BmcAI	AGTACT	1 cut(s)	1574
Bme1390I	CCNGG	5 cut(s)	921, 1581, 1818, 2186, 2350
Bme18I	GGWCC	5 cut(s)	278, 321, 1118, 1344, 2346
BmeRI	GACNNNNNGTC	2 cut(s)	1820, 1891
BmgT120I	GGNCC	7 cut(s)	278, 321, 1118, 1186, 1344, 1459, 2346
BmiI	GGNNCC	6 cut(s)	762, 918, 1345, 1397, 1492, 2296
BmrFI	CCNGG	5 cut(s)	921, 1581, 1818, 2186, 2350
BmrI	ACTGGG	2 cut(s)	1350, 1365
BmtI	GCTAGC	1 cut(s)	1367
BmuI	ACTGGG	2 cut(s)	1350, 1365
BpmI	CTGGAG	3 cut(s)	1647, 2025, 2371
Bpu10I	CCTNAGC	2 cut(s)	630, 989
BpuEI	CTTGAG	2 cut(s)	1820, 1972
Bsa29I	ATCGAT	1 cut(s)	660
BsaBI	GATNNNNATC	1 cut(s)	207
BsaI	GGTCTC	2 cut(s)	484, 1828
BsaJI	CCNNGG	5 cut(s)	256, 306, 841, 1817, 2184
BsaWI	WCCGGW	3 cut(s)	275, 688, 1398
BsaXI	ACNNNNNCTCC	4 cut(s)	86, 116, 900, 930
Bsc4I	CCNNNNNNNGG	8 cut(s)	473, 993, 1145, 1195, 1391, 1586, 1817, 2064
Bse1I	ACTGG	6 cut(s)	588, 645, 1345, 1360, 1630, 1885
Bse21I	CCTNAGG	2 cut(s)	341, 1956
Bse3DI	GCAATG	2 cut(s)	612, 1485
Bse8I	GATNNNNATC	1 cut(s)	207
BseAI	TCCGGA	1 cut(s)	688
BseBI	CCWGG	5 cut(s)	921, 1581, 1818, 2186, 2350
BseCI	ATCGAT	1 cut(s)	660
BseDI	CCNNGG	5 cut(s)	256, 306, 841, 1817, 2184
BseGI	GGATG	6 cut(s)	120, 946, 1407, 1702, 1834, 1987
BseJI	GATNNNNATC	1 cut(s)	207
BseLI	CCNNNNNNNGG	8 cut(s)	473, 993, 1145, 1195, 1391, 1586, 1817, 2064
BseMI	GCAATG	2 cut(s)	612, 1485
BseMII	CTCAG	6 cut(s)	56, 296, 355, 621, 1947, 1958
BseNI	ACTGG	6 cut(s)	588, 645, 1345, 1360, 1630, 1885
BseRI	GAGGAG	3 cut(s)	94, 147, 647
BseSI	GKGCMC	4 cut(s)	771, 1398, 1441, 1493
BseYI	CCCAGC	1 cut(s)	1442
BsgI	GTGCAG	1 cut(s)	471
Bsh1236I	CGCG	2 cut(s)	126, 497
BshFI	GGCC	8 cut(s)	554, 1138, 1188, 1290, 1460, 1810, 2205, 2231
BshNI	GGYRCC	4 cut(s)	916, 1395, 1490, 2294
BshVI	ATCGAT	1 cut(s)	660
BsiHKAI	GWGCWC	5 cut(s)	273, 351, 771, 870, 2329
BsiSI	CCGG	3 cut(s)	276, 689, 1399
BslFI	GGGAC	2 cut(s)	1357, 2144
BslI	CCNNNNNNNGG	8 cut(s)	473, 993, 1145, 1195, 1391, 1586, 1817, 2064
BsmAI	GTCTC	6 cut(s)	484, 890, 903, 1828, 1990, 2172
BsmFI	GGGAC	2 cut(s)	1357, 2144
BsmI	GAATGC	2 cut(s)	583, 1732
BsnI	GGCC	8 cut(s)	554, 1138, 1188, 1290, 1460, 1810, 2205, 2231
Bso31I	GGTCTC	2 cut(s)	484, 1828
Bsp1286I	GDGCHC	8 cut(s)	273, 351, 771, 870, 1398, 1441, 1493, 2329
Bsp13I	TCCGGA	1 cut(s)	688
Bsp143I	GATC	6 cut(s)	202, 208, 657, 1054, 1688, 1710
Bsp19I	CCATGG	1 cut(s)	256
BspACI	CCGC	7 cut(s)	124, 163, 189, 393, 551, 2128, 2292
BspANI	GGCC	8 cut(s)	554, 1138, 1188, 1290, 1460, 1810, 2205, 2231
BspCNI	CTCAG	6 cut(s)	57, 295, 354, 622, 1948, 1959
BspDI	ATCGAT	1 cut(s)	660
BspEI	TCCGGA	1 cut(s)	688
BspFNI	CGCG	2 cut(s)	126, 497
BspLI	GGNNCC	6 cut(s)	762, 918, 1345, 1397, 1492, 2296
BspMAI	CTGCAG	1 cut(s)	2446
BspMI	ACCTGC	2 cut(s)	748, 2449
BspOI	GCTAGC	1 cut(s)	1367
BspPI	GGATC	1 cut(s)	1062
BspQI	GCTCTTC	2 cut(s)	1116, 1504
BspT107I	GGYRCC	4 cut(s)	916, 1395, 1490, 2294
BspTNI	GGTCTC	2 cut(s)	484, 1828
BsrDI	GCAATG	2 cut(s)	612, 1485
BsrI	ACTGG	6 cut(s)	588, 645, 1345, 1360, 1630, 1885
BssECI	CCNNGG	5 cut(s)	256, 306, 841, 1817, 2184
BssMI	GATC	6 cut(s)	202, 208, 657, 1054, 1688, 1710
BssT1I	CCWWGG	3 cut(s)	256, 306, 841
Bst2UI	CCWGG	5 cut(s)	921, 1581, 1818, 2186, 2350
Bst4CI	ACNGT	6 cut(s)	291, 600, 904, 1641, 2062, 2275
Bst6I	CTCTTC	5 cut(s)	63, 1116, 1504, 1833, 2241
BstAPI	GCANNNNNTGC	1 cut(s)	395
BstC8I	GCNNGC	7 cut(s)	40, 199, 400, 423, 808, 1067, 1365
BstDEI	CTNAG	8 cut(s)	65, 282, 341, 630, 989, 1956, 1967, 2163
BstDSI	CCRYGG	1 cut(s)	256
BstEII	GGTNACC	1 cut(s)	1883
BstENI	CCTNNNNNAGG	1 cut(s)	471
BstF5I	GGATG	6 cut(s)	120, 946, 1407, 1702, 1834, 1987
BstFNI	CGCG	2 cut(s)	126, 497
BstHHI	GCGC	3 cut(s)	128, 499, 1262
BstKTI	GATC	6 cut(s)	205, 211, 660, 1057, 1691, 1713
BstMAI	GTCTC	6 cut(s)	484, 890, 903, 1828, 1990, 2172
BstMBI	GATC	6 cut(s)	202, 208, 657, 1054, 1688, 1710
BstNI	CCWGG	5 cut(s)	921, 1581, 1818, 2186, 2350
BstNSI	RCATGY	1 cut(s)	201
BstPI	GGTNACC	1 cut(s)	1883
BstSCI	CCNGG	5 cut(s)	919, 1579, 1816, 2184, 2348
BstSFI	CTRYAG	3 cut(s)	822, 1221, 2442
BstSLI	GKGCMC	4 cut(s)	771, 1398, 1441, 1493
BstUI	CGCG	2 cut(s)	126, 497
Bsu15I	ATCGAT	1 cut(s)	660
Bsu36I	CCTNAGG	2 cut(s)	341, 1956
BsuRI	GGCC	8 cut(s)	554, 1138, 1188, 1290, 1460, 1810, 2205, 2231
BsuTUI	ATCGAT	1 cut(s)	660
BtgI	CCRYGG	1 cut(s)	256
BtgZI	GCGATG	1 cut(s)	442
BtsCI	GGATG	6 cut(s)	120, 946, 1407, 1702, 1834, 1987
BtsI	GCAGTG	1 cut(s)	2430
BtsIMutI	CAGTG	3 cut(s)	581, 2058, 2430
BveI	ACCTGC	2 cut(s)	748, 2449
Cac8I	GCNNGC	7 cut(s)	40, 199, 400, 423, 808, 1067, 1365
CaiI	CAGNNNCTG	2 cut(s)	395, 2060
CfoI	GCGC	3 cut(s)	128, 499, 1262
Cfr13I	GGNCC	7 cut(s)	278, 321, 1118, 1186, 1344, 1459, 2346
ClaI	ATCGAT	1 cut(s)	660
CseI	GACGC	1 cut(s)	503
CsiI	ACCWGGT	1 cut(s)	919
Csp6I	GTAC	7 cut(s)	314, 751, 917, 1149, 1573, 2147, 2295
CspCI	CAANNNNNGTGG	2 cut(s)	2089, 2124
CviQI	GTAC	7 cut(s)	314, 751, 917, 1149, 1573, 2147, 2295
DdeI	CTNAG	8 cut(s)	65, 282, 341, 630, 989, 1956, 1967, 2163
DpnI	GATC	6 cut(s)	204, 210, 659, 1056, 1690, 1712
DpnII	GATC	6 cut(s)	202, 208, 657, 1054, 1688, 1710
DraIII	CACNNNGTG	1 cut(s)	1211
DriI	GACNNNNNGTC	2 cut(s)	1820, 1891
EaeI	YGGCCR	2 cut(s)	1136, 1288
Eam1104I	CTCTTC	5 cut(s)	63, 1116, 1504, 1833, 2241
Eam1105I	GACNNNNNGTC	2 cut(s)	1820, 1891
EarI	CTCTTC	5 cut(s)	63, 1116, 1504, 1833, 2241
Ecl136II	GAGCTC	1 cut(s)	271
Eco130I	CCWWGG	3 cut(s)	256, 306, 841
Eco147I	AGGCCT	2 cut(s)	1810, 2205
Eco24I	GRGCYC	1 cut(s)	273
Eco31I	GGTCTC	2 cut(s)	484, 1828
Eco47I	GGWCC	5 cut(s)	278, 321, 1118, 1344, 2346
Eco53kI	GAGCTC	1 cut(s)	271
Eco57I	CTGAAG	3 cut(s)	1025, 1032, 1970
Eco81I	CCTNAGG	2 cut(s)	341, 1956
Eco91I	GGTNACC	1 cut(s)	1883
EcoICRI	GAGCTC	1 cut(s)	271
EcoNI	CCTNNNNNAGG	1 cut(s)	471
EcoO109I	RGGNCCY	2 cut(s)	1344, 1459
EcoO65I	GGTNACC	1 cut(s)	1883
EcoRII	CCWGG	5 cut(s)	919, 1579, 1816, 2184, 2348
EcoT14I	CCWWGG	3 cut(s)	256, 306, 841
EcoT22I	ATGCAT	2 cut(s)	1702, 1732
EcoT38I	GRGCYC	1 cut(s)	273
ErhI	CCWWGG	3 cut(s)	256, 306, 841
FalI	AAGNNNNNCTT	2 cut(s)	1638, 1670
FaqI	GGGAC	2 cut(s)	1357, 2144
FauI	CCCGC	1 cut(s)	2121
FauNDI	CATATG	1 cut(s)	1237
FblI	GTMKAC	1 cut(s)	1521
FokI	GGATG	6 cut(s)	107, 953, 1414, 1709, 1841, 1994
FriOI	GRGCYC	1 cut(s)	273
FspBI	CTAG	7 cut(s)	470, 1298, 1307, 1364, 1944, 2088, 2391
FspI	TGCGCA	1 cut(s)	1261
GlaI	GCGC	3 cut(s)	127, 498, 1261
GsaI	CCCAGC	1 cut(s)	1446
GsuI	CTGGAG	3 cut(s)	1647, 2025, 2371
HaeIII	GGCC	8 cut(s)	554, 1138, 1188, 1290, 1460, 1810, 2205, 2231
HapII	CCGG	3 cut(s)	276, 689, 1399
HgaI	GACGC	1 cut(s)	503
HhaI	GCGC	3 cut(s)	128, 499, 1262
Hin6I	GCGC	3 cut(s)	126, 497, 1260
HinP1I	GCGC	3 cut(s)	126, 497, 1260
HincII	GTYRAC	3 cut(s)	984, 1774, 2271
HindII	GTYRAC	3 cut(s)	984, 1774, 2271
HindIII	AAGCTT	1 cut(s)	1037
HinfI	GANTC	9 cut(s)	67, 90, 300, 812, 980, 1792, 1892, 1969, 2394
HpaI	GTTAAC	1 cut(s)	2271
HpaII	CCGG	3 cut(s)	276, 689, 1399
Hpy166II	GTNNAC	6 cut(s)	526, 769, 984, 1522, 1774, 2271
Hpy188III	TCNNGA	3 cut(s)	206, 689, 2391
Hpy8I	GTNNAC	6 cut(s)	526, 769, 984, 1522, 1774, 2271
HpyCH4III	ACNGT	6 cut(s)	291, 600, 904, 1641, 2062, 2275
HpyCH4IV	ACGT	2 cut(s)	316, 2083
HpyF3I	CTNAG	8 cut(s)	65, 282, 341, 630, 989, 1956, 1967, 2163
HpySE526I	ACGT	2 cut(s)	316, 2083
HspAI	GCGC	3 cut(s)	126, 497, 1260
Kpn2I	TCCGGA	1 cut(s)	688
KpnI	GGTACC	2 cut(s)	920, 2298
KspAI	GTTAAC	1 cut(s)	2271
Kzo9I	GATC	6 cut(s)	202, 208, 657, 1054, 1688, 1710
LguI	GCTCTTC	2 cut(s)	1116, 1504
LmnI	GCTCC	8 cut(s)	133, 346, 374, 803, 1231, 1259, 1866, 2044
MabI	ACCWGGT	1 cut(s)	919
MaeI	CTAG	7 cut(s)	470, 1298, 1307, 1364, 1944, 2088, 2391
MaeII	ACGT	2 cut(s)	316, 2083
MaeIII	GTNAC	5 cut(s)	594, 1316, 1783, 1842, 1883
MalI	GATC	6 cut(s)	204, 210, 659, 1056, 1690, 1712
MboI	GATC	6 cut(s)	202, 208, 657, 1054, 1688, 1710
MfeI	CAATTG	3 cut(s)	1004, 1323, 1377
MhlI	GDGCHC	8 cut(s)	273, 351, 771, 870, 1398, 1441, 1493, 2329
MlsI	TGGCCA	2 cut(s)	1138, 1290
MluNI	TGGCCA	2 cut(s)	1138, 1290
MlyI	GAGTC	7 cut(s)	76, 84, 821, 989, 1901, 1978, 2388
MmeI	TCCRAC	3 cut(s)	299, 781, 886
Mox20I	TGGCCA	2 cut(s)	1138, 1290
Mph1103I	ATGCAT	2 cut(s)	1702, 1732
MroI	TCCGGA	1 cut(s)	688
MroXI	GAANNNNTTC	4 cut(s)	290, 446, 726, 1752
MscI	TGGCCA	2 cut(s)	1138, 1290
MseI	TTAA	5 cut(s)	539, 885, 1977, 2031, 2270
MslI	CAYNNNNRTG	3 cut(s)	255, 779, 1207
Msp20I	TGGCCA	2 cut(s)	1138, 1290
MspA1I	CMGCKG	4 cut(s)	395, 1100, 1446, 2105
MspI	CCGG	3 cut(s)	276, 689, 1399
MspR9I	CCNGG	5 cut(s)	921, 1581, 1818, 2186, 2350
MunI	CAATTG	3 cut(s)	1004, 1323, 1377
Mva1269I	GAATGC	2 cut(s)	583, 1732
MvaI	CCWGG	5 cut(s)	921, 1581, 1818, 2186, 2350
MvnI	CGCG	2 cut(s)	126, 497
NcoI	CCATGG	1 cut(s)	256
NdeI	CATATG	1 cut(s)	1237
NdeII	GATC	6 cut(s)	202, 208, 657, 1054, 1688, 1710
NheI	GCTAGC	1 cut(s)	1363
NlaIV	GGNNCC	6 cut(s)	762, 918, 1345, 1397, 1492, 2296
NmuCI	GTSAC	2 cut(s)	1316, 1883
NsbI	TGCGCA	1 cut(s)	1261
NsiI	ATGCAT	2 cut(s)	1702, 1732
NspI	RCATGY	1 cut(s)	201
PaeI	GCATGC	1 cut(s)	201
PceI	AGGCCT	2 cut(s)	1810, 2205
PciSI	GCTCTTC	2 cut(s)	1116, 1504
PcsI	WCGNNNNNNNCGW	1 cut(s)	807
PctI	GAATGC	2 cut(s)	583, 1732
PdmI	GAANNNNTTC	4 cut(s)	290, 446, 726, 1752
PfeI	GAWTC	2 cut(s)	300, 1792
PflMI	CCANNNNNTGG	1 cut(s)	1145
PfoI	TCCNGGA	1 cut(s)	2348
PleI	GAGTC	7 cut(s)	75, 84, 820, 988, 1900, 1977, 2388
PpsI	GAGTC	7 cut(s)	75, 84, 820, 988, 1900, 1977, 2388
PpuMI	RGGWCCY	1 cut(s)	1344
PshBI	ATTAAT	2 cut(s)	539, 2031
PsiI	TTATAA	1 cut(s)	2476
Psp124BI	GAGCTC	1 cut(s)	273
Psp5II	RGGWCCY	1 cut(s)	1344
Psp6I	CCWGG	5 cut(s)	919, 1579, 1816, 2184, 2348
PspEI	GGTNACC	1 cut(s)	1883
PspFI	CCCAGC	1 cut(s)	1442
PspGI	CCWGG	5 cut(s)	919, 1579, 1816, 2184, 2348
PspN4I	GGNNCC	6 cut(s)	762, 918, 1345, 1397, 1492, 2296
PspPI	GGNCC	7 cut(s)	278, 321, 1118, 1186, 1344, 1459, 2346
PspPPI	RGGWCCY	1 cut(s)	1344
PstI	CTGCAG	1 cut(s)	2446
PstNI	CAGNNNCTG	2 cut(s)	395, 2060
PvuII	CAGCTG	3 cut(s)	1100, 1446, 2105
RsaI	GTAC	7 cut(s)	315, 752, 918, 1150, 1574, 2148, 2296
RsaNI	GTAC	7 cut(s)	314, 751, 917, 1149, 1573, 2147, 2295
RseI	CAYNNNNRTG	3 cut(s)	255, 779, 1207
SacI	GAGCTC	1 cut(s)	273
SapI	GCTCTTC	2 cut(s)	1116, 1504
SaqAI	TTAA	5 cut(s)	539, 885, 1977, 2031, 2270
Sau3AI	GATC	6 cut(s)	202, 208, 657, 1054, 1688, 1710
Sau96I	GGNCC	7 cut(s)	278, 321, 1118, 1186, 1344, 1459, 2346
ScaI	AGTACT	1 cut(s)	1574
SchI	GAGTC	7 cut(s)	76, 84, 821, 989, 1901, 1978, 2388
ScrFI	CCNGG	5 cut(s)	921, 1581, 1818, 2186, 2350
SduI	GDGCHC	8 cut(s)	273, 351, 771, 870, 1398, 1441, 1493, 2329
SexAI	ACCWGGT	1 cut(s)	919
SfcI	CTRYAG	3 cut(s)	822, 1221, 2442
SinI	GGWCC	5 cut(s)	278, 321, 1118, 1344, 2346
SmiMI	CAYNNNNRTG	3 cut(s)	255, 779, 1207
SmlI	CTYRAG	2 cut(s)	1799, 1987
SmoI	CTYRAG	2 cut(s)	1799, 1987
SphI	GCATGC	1 cut(s)	201
SseBI	AGGCCT	2 cut(s)	1810, 2205
SsiI	CCGC	7 cut(s)	124, 163, 189, 393, 551, 2128, 2292
SspMI	CTAG	7 cut(s)	470, 1298, 1307, 1364, 1944, 2088, 2391
SstI	GAGCTC	1 cut(s)	273
StuI	AGGCCT	2 cut(s)	1810, 2205
StyD4I	CCNGG	5 cut(s)	919, 1579, 1816, 2184, 2348
StyI	CCWWGG	3 cut(s)	256, 306, 841
TaaI	ACNGT	6 cut(s)	291, 600, 904, 1641, 2062, 2275
TaiI	ACGT	2 cut(s)	319, 2086
TaqI	TCGA	4 cut(s)	88, 660, 1569, 1813
TaqII	GACCGA	1 cut(s)	338
TatI	WGTACW	1 cut(s)	1572
TauI	GCSGC	2 cut(s)	395, 554
TfiI	GAWTC	2 cut(s)	300, 1792
Tru1I	TTAA	5 cut(s)	539, 885, 1977, 2031, 2270
Tru9I	TTAA	5 cut(s)	539, 885, 1977, 2031, 2270
TscAI	CASTG	3 cut(s)	588, 2065, 2437
TseFI	GTSAC	2 cut(s)	1316, 1883
Tsp45I	GTSAC	2 cut(s)	1316, 1883
TspDTI	ATGAA	8 cut(s)	439, 521, 559, 735, 1660, 1866, 1947, 2301
TspGWI	ACGGA	4 cut(s)	553, 1218, 1853, 2312
TspRI	CASTG	3 cut(s)	588, 2065, 2437
Van91I	CCANNNNNTGG	1 cut(s)	1145
VneI	GTGCAC	1 cut(s)	767
VpaK11BI	GGWCC	5 cut(s)	278, 321, 1118, 1344, 2346
VspI	ATTAAT	2 cut(s)	539, 2031
XagI	CCTNNNNNAGG	1 cut(s)	471
XapI	RAATTY	1 cut(s)	1748
XbaI	TCTAGA	1 cut(s)	2390
XceI	RCATGY	1 cut(s)	201
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2346
XmiI	GTMKAC	1 cut(s)	1521
XmnI	GAANNNNTTC	4 cut(s)	290, 446, 726, 1752
XspI	CTAG	7 cut(s)	470, 1298, 1307, 1364, 1944, 2088, 2391
ZrmI	AGTACT	1 cut(s)	1574
Zsp2I	ATGCAT	2 cut(s)	1702, 1732

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.