Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0013554

Physical Location & Seq

Genomic Coordinates Reverse (-)

17898712 .. 17905947

Gene Structure 7236 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000017530

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2493 bp

ATGGAAACCCTGAAGCTTCCAATTTCAATCAGACTCCCCAATCACCACTCTCCTCTTCTCAACCACCACCACCACCCAACCACCACCACCACCACTCGTCTCATCTCCCCCAAACCCATTCTCCGCCGCCTCCGCTCTCCTCTCTTTCGGTTCAAACCCTCTCTCCTTTCTCCCCCGCGAGATTTCCCTACTCTTCTTCGTTGCTCCGCGGCCGAGGTCCACTCCGATCACGATCACCGCCACGAGCACGAGCACGACCACCCCCACCATCATCACCGCCACGGCGGAGATTGTGCGGAGCTAACCGGGACTCAGAAAGCGTTCATCGGATTTGCAAAGGCTGTGCGATGGACCGACCTCGCCGATTTCCTCAGGGAGCACTTGCATTTGTGTTTCTGCTCCGCCGCGCTGTTCCTCGCCGCCGCCGCTTGCCCTTACGTGGTTCCCAAGCTCGCCGTGAAGCCTCTGCAGAATGCTTTCCTGATCGTCGCTTTTCCTCTAGTCGGAGTCTCTGCGGCACTTGATGCAATGACTGACATTAGTGGCGGGAAGGTGAACATTCATGTACTGATGGCTTTGGCAGCATTTGCCTCAGTGTTTATGGGGAATGCTCTTGAAGGAGGCTTGCTTTTGGCTATGTTCAATCTTGCTCATATCGCTGAGGAGTATTTTACCAGTCGCTCCATGATCGATGTGAAAGAGTTGAAAGAAAATTATCCGGATTCTGTCCTTGTTCTGGATATGGATGATAAACAGGTTCCGGATACATCTAATTTGAAGTACAAGCAGGTTCCTGTGCACGACCTACAAGTCGGGTCATATATCTTGGTTGGAGCTGGAGAGTCTGTGCCTGTAGATTGTGAAGTGTTCCAAGGTAGTGCTACCATTACTATCGAGCACTTAACGGGAGAAGTTACGCCATTGGAGACAAAAGCTGGAGACATGATACCTGGTGGTGCTAGGAACTTGGATGGCAGGATAATAGTGAAGGCAAGAAAAAATTGGAAAGAGTCAACCCTTAGCAGGATTGTGCAATTGACAGAAGAAGCACAATTAAATAAACCAAAGCTTCAGAGGTGGTTAGATCAGTTTGGCGAGCAATACAGCAAGGTGGTTGTAGTTTTGTCAGTTGCTGTTGCTCTACTTGGTCCATTCCTATTCAAGTGGCCGTTCATTGGTACATCAGCTTGCAGAGGATCAGTTTATAGAGCATTGGGCCTCATGGTGGCAGCATCACCGTGTGCTTTGGCTGTAGCTCCATTGGCCTATGCTACTGCAGTTAGCTCCTGCGCAAGGAAGGGTATATTGTTGAAAGGCGGTCATGTGCTAGATGCTCTAGCTTCCTGTCACACTATTGCGTTTGATAAAACTGGGACCTTGACAACTGGGGGCCTAGCGTTTAAAGCGATTGAACCAATTTATGGACATCAAGTTAGAAACAATAAATCAGATTTTTCTTCCTGTTGTGTGCCAAGCTGTGAAAAGGAGGCCCTTGCTGTCGCTGCCGCAATGGAGAAGGGTACCACTCACCCTATTGGAAGAGCTGTTGTAGACCATAGTGAAGGGAAAGACCTTCCTTCTGTTTCTGTTGAGAGTTTTGAGTATTTTCCCGGCAGAGGTCTAGTTGCTACTGTCAATGGCATCGAGTTAGGAACTGAAGGGGGTAAACTGTTGAAAGCATCTCTTGGTTCAGTAGATTTCATCACTTCACTGTGTTTGTCGGAAGATGCATCCAAAAAGATCAAGGAAGCTGTGAATGCTTCTTCTTACGGAACTGATTTTGTTCGTGCTGCTCTTTCAGTCGACGAAAAGGTAACACTGATTCACCTTGAGGATAGGCCTCGACCTGGGGTCTTGGATGTCATTGCAGAGTTACAAAATCAAGCGAAGCTCCGTACAATGATGTTAACTGGTGATCATGAGTCAAGTGCTTGGAGAGTTGCAAATGCTGTAGGTATCAATGAAGTTCATTGCAGCCTGAAGCCTGAGGATAAACTGAGTCATGTCAAGGGTGTCTCAAGGGATATGGGGGGAGGTCTGATAATGGTTGGTGAAGGCATTAATGATGCTCCAGCACTTGCAGCTGCAACGGTAGGGATTGTCCTTGCTCAACGTGCTAGTGCAACTGCCACAGCTGTTGCTGATGTGTTGTTGCTGCGTGACAATATATCTGCCGTGCCATTCTGTATCGCGAAGTCTCGCCAAACAACTTCCCTGGTTAAGCAGAATGTAGTCCTTGCTTTAAGCTGTATAGTTTTGGCCTCTCTTCCATCTGTTTTAGGTTTTCTTCCCCTCTGGTTAACGGTTCTATTACATGAAGGCGGTACCCTTCTTGTCTGCCTCAACTCCATCCGTGCTCTAAACCACCCGACATGGAGCTGGAGGCAGGATTTATGGGATTTATTTAACCAACTGAAATCAAGACTCGAATTGTCAAGGAGACTTGTAACGAGCTCAAACCCCACCCAAGCTGCACCTCCGGTATCCTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0003824 GO:0005215 GO:0005385 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006812 GO:0006829 GO:0006873 GO:0006875 GO:0006878 GO:0008150 GO:0008324 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009536 GO:0009628 GO:0009642 GO:0009941 GO:0009987 GO:0015075 GO:0015318 GO:0015633 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019725 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0031967 GO:0031975 GO:0034220 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046915 GO:0046916 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0055065 GO:0055069 GO:0055070 GO:0055076 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0070838 GO:0071577 GO:0072507 GO:0072509 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

E1-E2_ATPase Hydrolase

Protein Analysis

831

Amino Acids

89.66

Weight (kDa)

7.64

Isoelectric Point (pI)

34.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
E1-E2_ATPase	PF00122	257 - 348	3.5e-23	P-type ATPase actuator domain
Hydrolase	PF00702	451 - 696	2.9e-20	haloacid dehalogenase-like hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013554)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37270
fragaria_vesca	FvH4_1g16780 FvH4_1g16780 FvH4_1g16780
malus_domestica	MD02G1179100.v1.1 MD15G1288800.v1.1
prunus_persica	Prupe.6G228900_v2.0.a1
pyrus_communis	pycom02g14510
rosa_chinensis	RchiOBHm_Chr2g0106681
rosa_laevigata	RLG00000017530
rosa_multiflora	Rmu_sc0004000.1_g000005
rosa_roxburghii	Rroxscaffold_2G00136890
rosa_rugosa	Rorug02G0137700
rosa_samantha	Rh2AG188700 Rh2BG199900 Rh2CG193800 Rh2DG195000
rosa_wichuraiana	Rw2G014840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2491
AasI	GACNNNNNNGTC	1 cut(s)	809
Acc16I	TGCGCA	1 cut(s)	1291
Acc36I	ACCTGC	1 cut(s)	778
Acc65I	GGTACC	2 cut(s)	1520, 2324
AccB1I	GGYRCC	2 cut(s)	1520, 2324
AccB7I	CCANNNNNTGG	1 cut(s)	1421
AccBSI	CCGCTC	1 cut(s)	135
AccI	GTMKAC	2 cut(s)	1551, 1803
AccII	CGCG	4 cut(s)	178, 209, 407, 2192
AccIII	TCCGGA	2 cut(s)	718, 760
AclWI	GGATC	1 cut(s)	1204
AcoI	YGGCCR	2 cut(s)	210, 1166
AcuI	CTGAAG	4 cut(s)	32, 1055, 1677, 2000
AdeI	CACNNNGTG	1 cut(s)	1241
AfaI	GTAC	6 cut(s)	567, 782, 1180, 1522, 1897, 2326
AhdI	GACNNNNNGTC	1 cut(s)	1850
AjnI	CCWGG	3 cut(s)	949, 1846, 2214
Alw21I	GWGCWC	7 cut(s)	249, 255, 381, 801, 900, 2359, 2456
Alw26I	GTCTC	7 cut(s)	104, 514, 920, 933, 2020, 2202, 2434
Alw44I	GTGCAC	1 cut(s)	797
AlwI	GGATC	1 cut(s)	1204
AlwNI	CAGNNNCTG	1 cut(s)	1133
Aor13HI	TCCGGA	2 cut(s)	718, 760
AoxI	GGCC	8 cut(s)	210, 1166, 1216, 1263, 1390, 1488, 1838, 2259
ApaLI	GTGCAC	1 cut(s)	797
ApeKI	GCWGC	9 cut(s)	581, 1229, 1502, 1790, 1974, 2081, 2084, 2155, 2471
AseI	ATTAAT	1 cut(s)	2061
Asp700I	GAANNNNTTC	2 cut(s)	320, 476
Asp718I	GGTACC	2 cut(s)	1520, 2324
AspLEI	GCGC	2 cut(s)	409, 1292
AspS9I	GGNCC	7 cut(s)	217, 351, 1148, 1216, 1374, 1390, 1489
AsuC2I	CCSGG	2 cut(s)	307, 1611
AsuHPI	GGTGA	9 cut(s)	35, 227, 266, 565, 1227, 1520, 1817, 1925, 2063
AvaII	GGWCC	4 cut(s)	217, 351, 1148, 1374
AxyI	CCTNAGG	2 cut(s)	371, 1986
BaeGI	GKGCMC	1 cut(s)	801
BanI	GGYRCC	2 cut(s)	1520, 2324
BanII	GRGCYC	1 cut(s)	2456
BauI	CACGAG	2 cut(s)	242, 248
Bbv12I	GWGCWC	7 cut(s)	249, 255, 381, 801, 900, 2359, 2456
BbvCI	CCTCAGC	1 cut(s)	660
BbvI	GCAGC	9 cut(s)	593, 1241, 1489, 1777, 1986, 2071, 2093, 2142, 2458
BccI	CCATC	6 cut(s)	276, 342, 565, 965, 2278, 2357
BceAI	ACGGC	4 cut(s)	298, 440, 1153, 2159
BciT130I	CCWGG	3 cut(s)	951, 1848, 2216
BciVI	GTATCC	1 cut(s)	757
BclI	TGATCA	1 cut(s)	1915
BcnI	CCSGG	2 cut(s)	307, 1611
BcoDI	GTCTC	7 cut(s)	104, 514, 920, 933, 2020, 2202, 2434
BfaI	CTAG	7 cut(s)	500, 960, 1328, 1337, 1394, 1622, 2118
BfmI	CTRYAG	5 cut(s)	467, 852, 1251, 1275, 1950
BfuAI	ACCTGC	1 cut(s)	778
BfuI	GTATCC	1 cut(s)	757
Bme1390I	CCNGG	5 cut(s)	307, 951, 1611, 1848, 2216
Bme18I	GGWCC	4 cut(s)	217, 351, 1148, 1374
BmeRI	GACNNNNNGTC	1 cut(s)	1850
BmgT120I	GGNCC	7 cut(s)	217, 351, 1148, 1216, 1374, 1390, 1489
BmiI	GGNNCC	7 cut(s)	444, 759, 792, 1375, 1391, 1522, 2326
BmrFI	CCNGG	5 cut(s)	307, 951, 1611, 1848, 2216
BmrI	ACTGGG	2 cut(s)	1380, 1395
BmsI	GCATC	8 cut(s)	514, 1241, 1321, 1650, 1688, 1717, 1739, 2056
BmuI	ACTGGG	2 cut(s)	1380, 1395
BplI	GAGNNNNNCTC	2 cut(s)	206, 238
BpmI	CTGGAG	4 cut(s)	858, 957, 2055, 2401
Bpu10I	CCTNAGC	2 cut(s)	660, 1019
BpuEI	CTTGAG	2 cut(s)	1850, 2002
BpuMI	CCSGG	2 cut(s)	307, 1611
Bsa29I	ATCGAT	1 cut(s)	690
BsaAI	YACGTR	1 cut(s)	439
BsaBI	GATNNNNATC	1 cut(s)	231
BsaJI	CCNNGG	6 cut(s)	207, 213, 280, 871, 1847, 2214
BsaWI	WCCGGW	3 cut(s)	718, 760, 2479
BsaXI	ACNNNNNCTCC	6 cut(s)	105, 135, 147, 177, 831, 861
Bse1I	ACTGG	4 cut(s)	675, 1375, 1390, 1915
Bse21I	CCTNAGG	2 cut(s)	371, 1986
Bse3DI	GCAATG	4 cut(s)	534, 1515, 1863, 1969
Bse8I	GATNNNNATC	1 cut(s)	231
BseAI	TCCGGA	2 cut(s)	718, 760
BseBI	CCWGG	3 cut(s)	951, 1848, 2216
BseCI	ATCGAT	1 cut(s)	690
BseDI	CCNNGG	6 cut(s)	207, 213, 280, 871, 1847, 2214
BseGI	GGATG	5 cut(s)	751, 976, 1730, 1864, 2349
BseJI	GATNNNNATC	1 cut(s)	231
BseMI	GCAATG	4 cut(s)	534, 1515, 1863, 1969
BseMII	CTCAG	6 cut(s)	326, 385, 606, 651, 1977, 1988
BseNI	ACTGG	4 cut(s)	675, 1375, 1390, 1915
BseRI	GAGGAG	3 cut(s)	42, 129, 677
BseSI	GKGCMC	1 cut(s)	801
BseX3I	CGGCCG	1 cut(s)	210
BseXI	GCAGC	9 cut(s)	593, 1241, 1489, 1777, 1986, 2071, 2093, 2142, 2458
BsgI	GTGCAG	1 cut(s)	2457
Bsh1236I	CGCG	4 cut(s)	178, 209, 407, 2192
Bsh1285I	CGRYCG	1 cut(s)	213
BshFI	GGCC	8 cut(s)	212, 1168, 1218, 1265, 1392, 1490, 1840, 2261
BshNI	GGYRCC	2 cut(s)	1520, 2324
BshVI	ATCGAT	1 cut(s)	690
BsiEI	CGRYCG	1 cut(s)	213
BsiHKAI	GWGCWC	7 cut(s)	249, 255, 381, 801, 900, 2359, 2456
BsiSI	CCGG	5 cut(s)	306, 719, 761, 1611, 2480
BslFI	GGGAC	2 cut(s)	322, 1387
BsmAI	GTCTC	7 cut(s)	104, 514, 920, 933, 2020, 2202, 2434
BsmBI	CGTCTC	1 cut(s)	104
BsmFI	GGGAC	2 cut(s)	322, 1387
BsmI	GAATGC	3 cut(s)	478, 613, 1762
BsnI	GGCC	8 cut(s)	212, 1168, 1218, 1265, 1392, 1490, 1840, 2261
Bsp1286I	GDGCHC	7 cut(s)	249, 255, 381, 801, 900, 2359, 2456
Bsp13I	TCCGGA	2 cut(s)	718, 760
Bsp143I	GATC	8 cut(s)	226, 232, 483, 687, 1084, 1196, 1740, 1915
Bsp68I	TCGCGA	1 cut(s)	2192
BspANI	GGCC	8 cut(s)	212, 1168, 1218, 1265, 1392, 1490, 1840, 2261
BspCNI	CTCAG	6 cut(s)	325, 384, 605, 652, 1978, 1989
BspDI	ATCGAT	1 cut(s)	690
BspEI	TCCGGA	2 cut(s)	718, 760
BspFNI	CGCG	4 cut(s)	178, 209, 407, 2192
BspHI	TCATGA	1 cut(s)	1918
BspLI	GGNNCC	7 cut(s)	444, 759, 792, 1375, 1391, 1522, 2326
BspMAI	CTGCAG	2 cut(s)	471, 1279
BspMI	ACCTGC	1 cut(s)	778
BspPI	GGATC	1 cut(s)	1204
BspQI	GCTCTTC	1 cut(s)	1534
BspT107I	GGYRCC	2 cut(s)	1520, 2324
BsrBI	CCGCTC	1 cut(s)	135
BsrDI	GCAATG	4 cut(s)	534, 1515, 1863, 1969
BsrI	ACTGG	4 cut(s)	675, 1375, 1390, 1915
BssECI	CCNNGG	6 cut(s)	207, 213, 280, 871, 1847, 2214
BssMI	GATC	8 cut(s)	226, 232, 483, 687, 1084, 1196, 1740, 1915
BssSI	CACGAG	2 cut(s)	242, 248
BssT1I	CCWWGG	1 cut(s)	871
Bst2BI	CACGAG	2 cut(s)	242, 248
Bst2UI	CCWGG	3 cut(s)	951, 1848, 2216
Bst4CI	ACNGT	6 cut(s)	1239, 1633, 1671, 1713, 2092, 2305
Bst6I	CTCTTC	4 cut(s)	60, 198, 1534, 2271
BstAPI	GCANNNNNTGC	2 cut(s)	524, 587
BstBAI	YACGTR	1 cut(s)	439
BstC8I	GCNNGC	5 cut(s)	430, 453, 626, 1097, 1189
BstDEI	CTNAG	7 cut(s)	312, 371, 592, 660, 1019, 1986, 1997
BstDSI	CCRYGG	2 cut(s)	207, 280
BstENI	CCTNNNNNAGG	1 cut(s)	1291
BstF5I	GGATG	5 cut(s)	751, 976, 1730, 1864, 2349
BstFNI	CGCG	4 cut(s)	178, 209, 407, 2192
BstHHI	GCGC	2 cut(s)	409, 1292
BstKTI	GATC	8 cut(s)	229, 235, 486, 690, 1087, 1199, 1743, 1918
BstMAI	GTCTC	7 cut(s)	104, 514, 920, 933, 2020, 2202, 2434
BstMBI	GATC	8 cut(s)	226, 232, 483, 687, 1084, 1196, 1740, 1915
BstMCI	CGRYCG	1 cut(s)	213
BstNI	CCWGG	3 cut(s)	951, 1848, 2216
BstSCI	CCNGG	5 cut(s)	305, 949, 1609, 1846, 2214
BstSFI	CTRYAG	5 cut(s)	467, 852, 1251, 1275, 1950
BstSLI	GKGCMC	1 cut(s)	801
BstUI	CGCG	4 cut(s)	178, 209, 407, 2192
BstV1I	GCAGC	9 cut(s)	593, 1241, 1489, 1777, 1986, 2071, 2093, 2142, 2458
BstZI	CGGCCG	1 cut(s)	210
Bsu15I	ATCGAT	1 cut(s)	690
Bsu36I	CCTNAGG	2 cut(s)	371, 1986
BsuI	GTATCC	1 cut(s)	757
BsuRI	GGCC	8 cut(s)	212, 1168, 1218, 1265, 1392, 1490, 1840, 2261
BsuTUI	ATCGAT	1 cut(s)	690
BtgI	CCRYGG	2 cut(s)	207, 280
BtgZI	GCGATG	1 cut(s)	361
BtsCI	GGATG	5 cut(s)	751, 976, 1730, 1864, 2349
BtsIMutI	CAGTG	3 cut(s)	600, 1709, 1817
BtuMI	TCGCGA	1 cut(s)	2192
BveI	ACCTGC	1 cut(s)	778
Cac8I	GCNNGC	5 cut(s)	430, 453, 626, 1097, 1189
CaiI	CAGNNNCTG	1 cut(s)	1133
CciI	TCATGA	1 cut(s)	1918
CfoI	GCGC	2 cut(s)	409, 1292
Cfr13I	GGNCC	7 cut(s)	217, 351, 1148, 1216, 1374, 1390, 1489
Cfr42I	CCGCGG	1 cut(s)	210
ClaI	ATCGAT	1 cut(s)	690
CsiI	ACCWGGT	1 cut(s)	949
Csp6I	GTAC	6 cut(s)	566, 781, 1179, 1521, 1896, 2325
CspCI	CAANNNNNGTGG	2 cut(s)	2119, 2154
CviAII	CATG	9 cut(s)	563, 685, 943, 1222, 1322, 1919, 2003, 2315, 2373
CviQI	GTAC	6 cut(s)	566, 781, 1179, 1521, 1896, 2325
DdeI	CTNAG	7 cut(s)	312, 371, 592, 660, 1019, 1986, 1997
DpnI	GATC	8 cut(s)	228, 234, 485, 689, 1086, 1198, 1742, 1917
DpnII	GATC	8 cut(s)	226, 232, 483, 687, 1084, 1196, 1740, 1915
DraI	TTTAAA	1 cut(s)	1402
DraIII	CACNNNGTG	1 cut(s)	1241
DrdI	GACNNNNNNGTC	1 cut(s)	809
DriI	GACNNNNNGTC	1 cut(s)	1850
DseDI	GACNNNNNNGTC	1 cut(s)	809
EaeI	YGGCCR	2 cut(s)	210, 1166
EagI	CGGCCG	1 cut(s)	210
Eam1104I	CTCTTC	4 cut(s)	60, 198, 1534, 2271
Eam1105I	GACNNNNNGTC	1 cut(s)	1850
EarI	CTCTTC	4 cut(s)	60, 198, 1534, 2271
EciI	GGCGGA	3 cut(s)	113, 300, 391
Ecl136II	GAGCTC	1 cut(s)	2454
EclXI	CGGCCG	1 cut(s)	210
Eco130I	CCWWGG	1 cut(s)	871
Eco147I	AGGCCT	1 cut(s)	1840
Eco24I	GRGCYC	1 cut(s)	2456
Eco47I	GGWCC	4 cut(s)	217, 351, 1148, 1374
Eco52I	CGGCCG	1 cut(s)	210
Eco53kI	GAGCTC	1 cut(s)	2454
Eco57I	CTGAAG	4 cut(s)	32, 1055, 1677, 2000
Eco81I	CCTNAGG	2 cut(s)	371, 1986
EcoICRI	GAGCTC	1 cut(s)	2454
EcoNI	CCTNNNNNAGG	1 cut(s)	1291
EcoO109I	RGGNCCY	3 cut(s)	1374, 1390, 1489
EcoRII	CCWGG	3 cut(s)	949, 1846, 2214
EcoT14I	CCWWGG	1 cut(s)	871
EcoT22I	ATGCAT	1 cut(s)	1732
EcoT38I	GRGCYC	1 cut(s)	2456
ErhI	CCWWGG	1 cut(s)	871
Esp3I	CGTCTC	1 cut(s)	104
FaeI	CATG	9 cut(s)	566, 688, 946, 1225, 1325, 1922, 2006, 2318, 2376
FalI	AAGNNNNNCTT	2 cut(s)	1668, 1700
FaqI	GGGAC	2 cut(s)	322, 1387
FatI	CATG	9 cut(s)	562, 684, 942, 1221, 1321, 1918, 2002, 2314, 2372
FauI	CCCGC	2 cut(s)	183, 539
FbaI	TGATCA	1 cut(s)	1915
FblI	GTMKAC	2 cut(s)	1551, 1803
FokI	GGATG	5 cut(s)	758, 983, 1717, 1871, 2336
FriOI	GRGCYC	1 cut(s)	2456
FspBI	CTAG	7 cut(s)	500, 960, 1328, 1337, 1394, 1622, 2118
FspI	TGCGCA	1 cut(s)	1291
GlaI	GCGC	2 cut(s)	408, 1291
GsuI	CTGGAG	4 cut(s)	858, 957, 2055, 2401
HaeIII	GGCC	8 cut(s)	212, 1168, 1218, 1265, 1392, 1490, 1840, 2261
HapII	CCGG	5 cut(s)	306, 719, 761, 1611, 2480
HhaI	GCGC	2 cut(s)	409, 1292
Hin1II	CATG	9 cut(s)	566, 688, 946, 1225, 1325, 1922, 2006, 2318, 2376
Hin6I	GCGC	2 cut(s)	407, 1290
HinP1I	GCGC	2 cut(s)	407, 1290
HincII	GTYRAC	4 cut(s)	1014, 1804, 1908, 2301
HindII	GTYRAC	4 cut(s)	1014, 1804, 1908, 2301
HindIII	AAGCTT	2 cut(s)	14, 1067
HpaI	GTTAAC	2 cut(s)	1908, 2301
HpaII	CCGG	5 cut(s)	306, 719, 761, 1611, 2480
HphI	GGTGA	9 cut(s)	35, 227, 266, 565, 1227, 1520, 1817, 1925, 2063
Hpy166II	GTNNAC	9 cut(s)	220, 556, 799, 1014, 1552, 1667, 1804, 1908, 2301
Hpy188I	TCNGA	9 cut(s)	32, 226, 315, 329, 506, 1074, 1450, 1723, 2040
Hpy188III	TCNNGA	9 cut(s)	230, 481, 614, 719, 737, 761, 1919, 2191, 2421
Hpy8I	GTNNAC	9 cut(s)	220, 556, 799, 1014, 1552, 1667, 1804, 1908, 2301
Hpy99I	CGWCG	2 cut(s)	491, 1808
HpyCH4III	ACNGT	6 cut(s)	1239, 1633, 1671, 1713, 2092, 2305
HpyCH4IV	ACGT	2 cut(s)	438, 2113
HpyF3I	CTNAG	7 cut(s)	312, 371, 592, 660, 1019, 1986, 1997
HpySE526I	ACGT	2 cut(s)	438, 2113
Hsp92II	CATG	9 cut(s)	566, 688, 946, 1225, 1325, 1922, 2006, 2318, 2376
HspAI	GCGC	2 cut(s)	407, 1290
Kpn2I	TCCGGA	2 cut(s)	718, 760
KpnI	GGTACC	2 cut(s)	1524, 2328
Ksp22I	TGATCA	1 cut(s)	1915
KspAI	GTTAAC	2 cut(s)	1908, 2301
KspI	CCGCGG	1 cut(s)	210
Kzo9I	GATC	8 cut(s)	226, 232, 483, 687, 1084, 1196, 1740, 1915
LguI	GCTCTTC	1 cut(s)	1534
Lsp1109I	GCAGC	9 cut(s)	593, 1241, 1489, 1777, 1986, 2071, 2093, 2142, 2458
LweI	GCATC	8 cut(s)	514, 1241, 1321, 1650, 1688, 1717, 1739, 2056
MabI	ACCWGGT	1 cut(s)	949
MaeI	CTAG	7 cut(s)	500, 960, 1328, 1337, 1394, 1622, 2118
MaeII	ACGT	2 cut(s)	438, 2113
MaeIII	GTNAC	6 cut(s)	913, 1346, 1813, 1872, 2159, 2446
MalI	GATC	8 cut(s)	228, 234, 485, 689, 1086, 1198, 1742, 1917
MbiI	CCGCTC	1 cut(s)	135
MboI	GATC	8 cut(s)	226, 232, 483, 687, 1084, 1196, 1740, 1915
MfeI	CAATTG	1 cut(s)	1034
MhlI	GDGCHC	7 cut(s)	249, 255, 381, 801, 900, 2359, 2456
MluCI	AATT	8 cut(s)	21, 712, 772, 1000, 1034, 1052, 1416, 2429
MlyI	GAGTC	8 cut(s)	27, 304, 516, 851, 1019, 1931, 2008, 2418
MmeI	TCCRAC	3 cut(s)	484, 811, 1701
Mph1103I	ATGCAT	1 cut(s)	1732
MroI	TCCGGA	2 cut(s)	718, 760
MroXI	GAANNNNTTC	2 cut(s)	320, 476
MseI	TTAA	9 cut(s)	902, 1055, 1401, 1907, 2061, 2220, 2243, 2300, 2406
MslI	CAYNNNNRTG	1 cut(s)	1237
MspA1I	CMGCKG	3 cut(s)	209, 2084, 2135
MspI	CCGG	5 cut(s)	306, 719, 761, 1611, 2480
MspR9I	CCNGG	5 cut(s)	307, 951, 1611, 1848, 2216
MunI	CAATTG	1 cut(s)	1034
Mva1269I	GAATGC	3 cut(s)	478, 613, 1762
MvaI	CCWGG	3 cut(s)	951, 1848, 2216
MvnI	CGCG	4 cut(s)	178, 209, 407, 2192
NciI	CCSGG	2 cut(s)	307, 1611
NdeII	GATC	8 cut(s)	226, 232, 483, 687, 1084, 1196, 1740, 1915
NlaIII	CATG	9 cut(s)	566, 688, 946, 1225, 1325, 1922, 2006, 2318, 2376
NlaIV	GGNNCC	7 cut(s)	444, 759, 792, 1375, 1391, 1522, 2326
NmeAIII	GCCGAG	1 cut(s)	238
NmuCI	GTSAC	2 cut(s)	1346, 2159
NruI	TCGCGA	1 cut(s)	2192
NsbI	TGCGCA	1 cut(s)	1291
NsiI	ATGCAT	1 cut(s)	1732
PagI	TCATGA	1 cut(s)	1918
PceI	AGGCCT	1 cut(s)	1840
PciSI	GCTCTTC	1 cut(s)	1534
PctI	GAATGC	3 cut(s)	478, 613, 1762
PdmI	GAANNNNTTC	2 cut(s)	320, 476
PfeI	GAWTC	2 cut(s)	722, 1822
PflMI	CCANNNNNTGG	1 cut(s)	1421
PleI	GAGTC	8 cut(s)	27, 304, 515, 850, 1018, 1930, 2007, 2418
PpsI	GAGTC	8 cut(s)	27, 304, 515, 850, 1018, 1930, 2007, 2418
Ppu21I	YACGTR	1 cut(s)	439
PpuMI	RGGWCCY	1 cut(s)	1374
PshBI	ATTAAT	1 cut(s)	2061
PsiI	TTATAA	1 cut(s)	2491
Psp124BI	GAGCTC	1 cut(s)	2456
Psp5II	RGGWCCY	1 cut(s)	1374
Psp6I	CCWGG	3 cut(s)	949, 1846, 2214
PspGI	CCWGG	3 cut(s)	949, 1846, 2214
PspN4I	GGNNCC	7 cut(s)	444, 759, 792, 1375, 1391, 1522, 2326
PspPI	GGNCC	7 cut(s)	217, 351, 1148, 1216, 1374, 1390, 1489
PspPPI	RGGWCCY	1 cut(s)	1374
PstI	CTGCAG	2 cut(s)	471, 1279
PstNI	CAGNNNCTG	1 cut(s)	1133
PvuII	CAGCTG	2 cut(s)	2084, 2135
RruI	TCGCGA	1 cut(s)	2192
RsaI	GTAC	6 cut(s)	567, 782, 1180, 1522, 1897, 2326
RsaNI	GTAC	6 cut(s)	566, 781, 1179, 1521, 1896, 2325
RseI	CAYNNNNRTG	1 cut(s)	1237
SacI	GAGCTC	1 cut(s)	2456
SacII	CCGCGG	1 cut(s)	210
SalI	GTCGAC	1 cut(s)	1802
SapI	GCTCTTC	1 cut(s)	1534
SaqAI	TTAA	9 cut(s)	902, 1055, 1401, 1907, 2061, 2220, 2243, 2300, 2406
Sau3AI	GATC	8 cut(s)	226, 232, 483, 687, 1084, 1196, 1740, 1915
Sau96I	GGNCC	7 cut(s)	217, 351, 1148, 1216, 1374, 1390, 1489
SchI	GAGTC	8 cut(s)	27, 304, 516, 851, 1019, 1931, 2008, 2418
ScrFI	CCNGG	5 cut(s)	307, 951, 1611, 1848, 2216
SduI	GDGCHC	7 cut(s)	249, 255, 381, 801, 900, 2359, 2456
SexAI	ACCWGGT	1 cut(s)	949
SfaNI	GCATC	8 cut(s)	514, 1241, 1321, 1650, 1688, 1717, 1739, 2056
SfcI	CTRYAG	5 cut(s)	467, 852, 1251, 1275, 1950
Sfr303I	CCGCGG	1 cut(s)	210
SgrBI	CCGCGG	1 cut(s)	210
SinI	GGWCC	4 cut(s)	217, 351, 1148, 1374
SmiMI	CAYNNNNRTG	1 cut(s)	1237
SmlI	CTYRAG	2 cut(s)	1829, 2017
SmoI	CTYRAG	2 cut(s)	1829, 2017
Sse9I	AATT	8 cut(s)	21, 712, 772, 1000, 1034, 1052, 1416, 2429
SseBI	AGGCCT	1 cut(s)	1840
SspMI	CTAG	7 cut(s)	500, 960, 1328, 1337, 1394, 1622, 2118
SstI	GAGCTC	1 cut(s)	2456
StuI	AGGCCT	1 cut(s)	1840
StyD4I	CCNGG	5 cut(s)	305, 949, 1609, 1846, 2214
StyI	CCWWGG	1 cut(s)	871
TaaI	ACNGT	6 cut(s)	1239, 1633, 1671, 1713, 2092, 2305
TaiI	ACGT	2 cut(s)	441, 2116
TaqI	TCGA	6 cut(s)	690, 894, 1644, 1803, 1843, 2427
TaqII	GACCGA	1 cut(s)	368
TasI	AATT	8 cut(s)	21, 712, 772, 1000, 1034, 1052, 1416, 2429
TatI	WGTACW	2 cut(s)	565, 780
TauI	GCSGC	8 cut(s)	129, 212, 407, 422, 425, 428, 518, 1508
TfiI	GAWTC	2 cut(s)	722, 1822
Tru1I	TTAA	9 cut(s)	902, 1055, 1401, 1907, 2061, 2220, 2243, 2300, 2406
Tru9I	TTAA	9 cut(s)	902, 1055, 1401, 1907, 2061, 2220, 2243, 2300, 2406
TscAI	CASTG	3 cut(s)	600, 1716, 1824
TseFI	GTSAC	2 cut(s)	1346, 2159
TseI	GCWGC	9 cut(s)	581, 1229, 1502, 1790, 1974, 2081, 2084, 2155, 2471
Tsp45I	GTSAC	2 cut(s)	1346, 2159
TspDTI	ATGAA	7 cut(s)	313, 551, 1162, 1690, 1958, 1977, 2331
TspGWI	ACGGA	3 cut(s)	1785, 1883, 2342
TspRI	CASTG	3 cut(s)	600, 1716, 1824
Van91I	CCANNNNNTGG	1 cut(s)	1421
VneI	GTGCAC	1 cut(s)	797
VpaK11BI	GGWCC	4 cut(s)	217, 351, 1148, 1374
VspI	ATTAAT	1 cut(s)	2061
XagI	CCTNNNNNAGG	1 cut(s)	1291
XmiI	GTMKAC	2 cut(s)	1551, 1803
XmnI	GAANNNNTTC	2 cut(s)	320, 476
XspI	CTAG	7 cut(s)	500, 960, 1328, 1337, 1394, 1622, 2118
Zsp2I	ATGCAT	1 cut(s)	1732

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.