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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G39840 |
| malus_domestica | MD01G1028100.v1.1 MD15G1325300.v1.1 |
| prunus_persica | Prupe.6G184700_v2.0.a1 |
| pyrus_communis | pycom01g05640 |
| rosa_chinensis | RchiOBHm_Chr2g0114541 |
| rosa_laevigata | RLG00000018113 |
| rosa_multiflora | Rmu_sc0000370.1_g000001 Rmu_sc0000371.1_g000011 Rmu_sc0027184.1_g000005 |
| rosa_roxburghii | Rroxscaffold_2G00130280 |
| rosa_rugosa | Rorug02G0190700 |
| rosa_samantha | Rh2AG248600 Rh2BG258200 Rh2CG252000 Rh2DG256700 |
| rosa_wichuraiana | Rw2G019330 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 437 |
| AciI | CCGC | 2 cut(s) | 1196, 1332 |
| AclWI | GGATC | 4 cut(s) | 122, 696, 910, 1039 |
| AcsI | RAATTY | 2 cut(s) | 454, 671 |
| AcvI | CACGTG | 1 cut(s) | 1266 |
| AdeI | CACNNNGTG | 1 cut(s) | 1255 |
| AfaI | GTAC | 6 cut(s) | 17, 36, 268, 361, 1094, 1319 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 797 |
| AflII | CTTAAG | 1 cut(s) | 1133 |
| AflIII | ACRYGT | 1 cut(s) | 1265 |
| AgsI | TTSAA | 4 cut(s) | 174, 787, 883, 892 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 808, 840, 1304, 1336 |
| Alw21I | GWGCWC | 2 cut(s) | 423, 1025 |
| Alw26I | GTCTC | 5 cut(s) | 9, 65, 369, 838, 874 |
| AlwI | GGATC | 4 cut(s) | 122, 696, 910, 1039 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1048 |
| Aor13HI | TCCGGA | 1 cut(s) | 437 |
| AoxI | GGCC | 1 cut(s) | 1129 |
| ApoI | RAATTY | 2 cut(s) | 454, 671 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 644, 676 |
| AspA2I | CCTAGG | 1 cut(s) | 1057 |
| AspLEI | GCGC | 1 cut(s) | 1153 |
| AspS9I | GGNCC | 1 cut(s) | 1129 |
| AsuHPI | GGTGA | 6 cut(s) | 169, 191, 543, 766, 973, 1346 |
| AvrII | CCTAGG | 1 cut(s) | 1057 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 26, 59 |
| BanII | GRGCYC | 2 cut(s) | 423, 1025 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1301, 1333 |
| BbrPI | CACGTG | 1 cut(s) | 1266 |
| BbsI | GAAGAC | 5 cut(s) | 657, 835, 1060, 1099, 1238 |
| Bbv12I | GWGCWC | 2 cut(s) | 423, 1025 |
| BccI | CCATC | 2 cut(s) | 308, 565 |
| BclI | TGATCA | 1 cut(s) | 106 |
| BcoDI | GTCTC | 5 cut(s) | 9, 65, 369, 838, 874 |
| BfaI | CTAG | 3 cut(s) | 638, 719, 1058 |
| BfmI | CTRYAG | 1 cut(s) | 1173 |
| BfrI | CTTAAG | 1 cut(s) | 1133 |
| BglII | AGATCT | 3 cut(s) | 163, 484, 679 |
| BlnI | CCTAGG | 1 cut(s) | 1057 |
| BmcAI | AGTACT | 2 cut(s) | 17, 1319 |
| BmgT120I | GGNCC | 1 cut(s) | 1129 |
| BpiI | GAAGAC | 5 cut(s) | 657, 835, 1060, 1099, 1238 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 713, 745 |
| BpmI | CTGGAG | 1 cut(s) | 893 |
| BpuEI | CTTGAG | 2 cut(s) | 407, 983 |
| BsaAI | YACGTR | 2 cut(s) | 1192, 1266 |
| BsaBI | GATNNNNATC | 1 cut(s) | 920 |
| BsaJI | CCNNGG | 3 cut(s) | 354, 1057, 1113 |
| BsaWI | WCCGGW | 2 cut(s) | 437, 983 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 797 |
| Bse1I | ACTGG | 4 cut(s) | 57, 181, 590, 1244 |
| Bse8I | GATNNNNATC | 1 cut(s) | 920 |
| BseAI | TCCGGA | 1 cut(s) | 437 |
| BseDI | CCNNGG | 3 cut(s) | 354, 1057, 1113 |
| BseGI | GGATG | 4 cut(s) | 503, 737, 846, 927 |
| BseJI | GATNNNNATC | 1 cut(s) | 920 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 797 |
| BseMII | CTCAG | 2 cut(s) | 408, 1290 |
| BseNI | ACTGG | 4 cut(s) | 57, 181, 590, 1244 |
| BseRI | GAGGAG | 4 cut(s) | 195, 198, 571, 1318 |
| BshFI | GGCC | 1 cut(s) | 1131 |
| BsiHKAI | GWGCWC | 2 cut(s) | 423, 1025 |
| BsiSI | CCGG | 2 cut(s) | 438, 984 |
| BslFI | GGGAC | 1 cut(s) | 839 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 797 |
| BsmAI | GTCTC | 5 cut(s) | 9, 65, 369, 838, 874 |
| BsmBI | CGTCTC | 1 cut(s) | 369 |
| BsmFI | GGGAC | 1 cut(s) | 839 |
| BsnI | GGCC | 1 cut(s) | 1131 |
| Bsp1286I | GDGCHC | 2 cut(s) | 423, 1025 |
| Bsp13I | TCCGGA | 1 cut(s) | 437 |
| Bsp19I | CCATGG | 1 cut(s) | 354 |
| BspACI | CCGC | 2 cut(s) | 1196, 1332 |
| BspANI | GGCC | 1 cut(s) | 1131 |
| BspCNI | CTCAG | 2 cut(s) | 409, 1291 |
| BspEI | TCCGGA | 1 cut(s) | 437 |
| BspHI | TCATGA | 1 cut(s) | 109 |
| BspPI | GGATC | 4 cut(s) | 122, 696, 910, 1039 |
| BspTI | CTTAAG | 1 cut(s) | 1133 |
| BsrI | ACTGG | 4 cut(s) | 57, 181, 590, 1244 |
| BssECI | CCNNGG | 3 cut(s) | 354, 1057, 1113 |
| BssT1I | CCWWGG | 2 cut(s) | 354, 1057 |
| Bst4CI | ACNGT | 1 cut(s) | 1253 |
| Bst6I | CTCTTC | 3 cut(s) | 68, 79, 310 |
| BstAFI | CTTAAG | 1 cut(s) | 1133 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1048 |
| BstBAI | YACGTR | 2 cut(s) | 1192, 1266 |
| BstC8I | GCNNGC | 1 cut(s) | 1040 |
| BstDEI | CTNAG | 5 cut(s) | 213, 270, 417, 865, 1299 |
| BstDSI | CCRYGG | 2 cut(s) | 354, 1113 |
| BstF5I | GGATG | 4 cut(s) | 503, 737, 846, 927 |
| BstHHI | GCGC | 1 cut(s) | 1153 |
| BstMAI | GTCTC | 5 cut(s) | 9, 65, 369, 838, 874 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 427, 1048, 1222 |
| BstSFI | CTRYAG | 1 cut(s) | 1173 |
| BstV2I | GAAGAC | 5 cut(s) | 657, 835, 1060, 1099, 1238 |
| BstX2I | RGATCY | 7 cut(s) | 127, 163, 484, 679, 701, 915, 1044 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 355 |
| BstYI | RGATCY | 7 cut(s) | 127, 163, 484, 679, 701, 915, 1044 |
| BsuRI | GGCC | 1 cut(s) | 1131 |
| BtgI | CCRYGG | 2 cut(s) | 354, 1113 |
| BtgZI | GCGATG | 1 cut(s) | 957 |
| BtsCI | GGATG | 4 cut(s) | 503, 737, 846, 927 |
| BtsIMutI | CAGTG | 1 cut(s) | 597 |
| Cac8I | GCNNGC | 1 cut(s) | 1040 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1048 |
| CciI | TCATGA | 1 cut(s) | 109 |
| CfoI | GCGC | 1 cut(s) | 1153 |
| Cfr13I | GGNCC | 1 cut(s) | 1129 |
| Csp6I | GTAC | 6 cut(s) | 16, 35, 267, 360, 1093, 1318 |
| CviAII | CATG | 3 cut(s) | 110, 355, 1090 |
| CviQI | GTAC | 6 cut(s) | 16, 35, 267, 360, 1093, 1318 |
| DdeI | CTNAG | 5 cut(s) | 213, 270, 417, 865, 1299 |
| DraIII | CACNNNGTG | 1 cut(s) | 1255 |
| Eam1104I | CTCTTC | 3 cut(s) | 68, 79, 310 |
| EarI | CTCTTC | 3 cut(s) | 68, 79, 310 |
| Ecl136II | GAGCTC | 2 cut(s) | 421, 1023 |
| Eco130I | CCWWGG | 2 cut(s) | 354, 1057 |
| Eco24I | GRGCYC | 2 cut(s) | 423, 1025 |
| Eco53kI | GAGCTC | 2 cut(s) | 421, 1023 |
| Eco72I | CACGTG | 1 cut(s) | 1266 |
| EcoICRI | GAGCTC | 2 cut(s) | 421, 1023 |
| EcoRI | GAATTC | 1 cut(s) | 671 |
| EcoT14I | CCWWGG | 2 cut(s) | 354, 1057 |
| EcoT38I | GRGCYC | 2 cut(s) | 423, 1025 |
| ErhI | CCWWGG | 2 cut(s) | 354, 1057 |
| Esp3I | CGTCTC | 1 cut(s) | 369 |
| FaeI | CATG | 3 cut(s) | 113, 358, 1093 |
| FaiI | YATR | 9 cut(s) | 111, 356, 524, 821, 964, 1030, 1091, 1206, 1260 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 23, 55 |
| FaqI | GGGAC | 1 cut(s) | 839 |
| FatI | CATG | 3 cut(s) | 109, 354, 1089 |
| FbaI | TGATCA | 1 cut(s) | 106 |
| FokI | GGATG | 4 cut(s) | 490, 724, 833, 914 |
| FriOI | GRGCYC | 2 cut(s) | 423, 1025 |
| FspBI | CTAG | 3 cut(s) | 638, 719, 1058 |
| GlaI | GCGC | 1 cut(s) | 1152 |
| GsuI | CTGGAG | 1 cut(s) | 893 |
| HaeIII | GGCC | 1 cut(s) | 1131 |
| HapII | CCGG | 2 cut(s) | 438, 984 |
| HhaI | GCGC | 1 cut(s) | 1153 |
| Hin1II | CATG | 3 cut(s) | 113, 358, 1093 |
| Hin6I | GCGC | 1 cut(s) | 1151 |
| HinP1I | GCGC | 1 cut(s) | 1151 |
| HindIII | AAGCTT | 2 cut(s) | 224, 894 |
| HinfI | GANTC | 7 cut(s) | 170, 236, 277, 693, 726, 888, 987 |
| HpaII | CCGG | 2 cut(s) | 438, 984 |
| HphI | GGTGA | 6 cut(s) | 169, 191, 543, 766, 973, 1346 |
| Hpy188I | TCNGA | 6 cut(s) | 140, 418, 562, 613, 677, 1230 |
| Hpy188III | TCNNGA | 7 cut(s) | 110, 167, 424, 438, 472, 910, 943 |
| Hpy99I | CGWCG | 1 cut(s) | 647 |
| HpyAV | CCTTC | 2 cut(s) | 1322, 1334 |
| HpyCH4III | ACNGT | 1 cut(s) | 1253 |
| HpyCH4IV | ACGT | 5 cut(s) | 362, 1032, 1065, 1191, 1265 |
| HpyCH4V | TGCA | 3 cut(s) | 1042, 1051, 1183 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 427, 1048, 1222 |
| HpyF3I | CTNAG | 5 cut(s) | 213, 270, 417, 865, 1299 |
| HpySE526I | ACGT | 5 cut(s) | 362, 1032, 1065, 1191, 1265 |
| Hsp92II | CATG | 3 cut(s) | 113, 358, 1093 |
| HspAI | GCGC | 1 cut(s) | 1151 |
| Kpn2I | TCCGGA | 1 cut(s) | 437 |
| Ksp22I | TGATCA | 1 cut(s) | 106 |
| LmnI | GCTCC | 1 cut(s) | 294 |
| MaeI | CTAG | 3 cut(s) | 638, 719, 1058 |
| MaeII | ACGT | 5 cut(s) | 362, 1032, 1065, 1191, 1265 |
| MaeIII | GTNAC | 3 cut(s) | 592, 979, 1334 |
| MflI | RGATCY | 7 cut(s) | 127, 163, 484, 679, 701, 915, 1044 |
| MhlI | GDGCHC | 2 cut(s) | 423, 1025 |
| MluCI | AATT | 4 cut(s) | 433, 454, 671, 1351 |
| MroI | TCCGGA | 1 cut(s) | 437 |
| MseI | TTAA | 3 cut(s) | 294, 375, 1134 |
| MslI | CAYNNNNRTG | 1 cut(s) | 353 |
| MspCI | CTTAAG | 1 cut(s) | 1133 |
| MspI | CCGG | 2 cut(s) | 438, 984 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 427, 1048, 1222 |
| NcoI | CCATGG | 1 cut(s) | 354 |
| NlaIII | CATG | 3 cut(s) | 113, 358, 1093 |
| NmuCI | GTSAC | 3 cut(s) | 592, 979, 1334 |
| PagI | TCATGA | 1 cut(s) | 109 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 651, 660 |
| PfeI | GAWTC | 7 cut(s) | 170, 236, 277, 693, 726, 888, 987 |
| PmaCI | CACGTG | 1 cut(s) | 1266 |
| PmlI | CACGTG | 1 cut(s) | 1266 |
| Ppu21I | YACGTR | 2 cut(s) | 1192, 1266 |
| Psp124BI | GAGCTC | 2 cut(s) | 423, 1025 |
| PspCI | CACGTG | 1 cut(s) | 1266 |
| PspPI | GGNCC | 1 cut(s) | 1129 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1048 |
| PsuI | RGATCY | 7 cut(s) | 127, 163, 484, 679, 701, 915, 1044 |
| RsaI | GTAC | 6 cut(s) | 17, 36, 268, 361, 1094, 1319 |
| RsaNI | GTAC | 6 cut(s) | 16, 35, 267, 360, 1093, 1318 |
| RseI | CAYNNNNRTG | 1 cut(s) | 353 |
| SacI | GAGCTC | 2 cut(s) | 423, 1025 |
| SaqAI | TTAA | 3 cut(s) | 294, 375, 1134 |
| Sau96I | GGNCC | 1 cut(s) | 1129 |
| ScaI | AGTACT | 2 cut(s) | 17, 1319 |
| SduI | GDGCHC | 2 cut(s) | 423, 1025 |
| SfcI | CTRYAG | 1 cut(s) | 1173 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 353 |
| SmlI | CTYRAG | 4 cut(s) | 11, 422, 998, 1133 |
| SmoI | CTYRAG | 4 cut(s) | 11, 422, 998, 1133 |
| Sse9I | AATT | 4 cut(s) | 433, 454, 671, 1351 |
| SsiI | CCGC | 2 cut(s) | 1196, 1332 |
| SspMI | CTAG | 3 cut(s) | 638, 719, 1058 |
| SstI | GAGCTC | 2 cut(s) | 423, 1025 |
| StyI | CCWWGG | 2 cut(s) | 354, 1057 |
| TaaI | ACNGT | 1 cut(s) | 1253 |
| TaiI | ACGT | 5 cut(s) | 365, 1035, 1068, 1194, 1268 |
| TaqI | TCGA | 5 cut(s) | 467, 602, 944, 990, 1019 |
| TasI | AATT | 4 cut(s) | 433, 454, 671, 1351 |
| TatI | WGTACW | 2 cut(s) | 15, 1317 |
| TfiI | GAWTC | 7 cut(s) | 170, 236, 277, 693, 726, 888, 987 |
| Tru1I | TTAA | 3 cut(s) | 294, 375, 1134 |
| Tru9I | TTAA | 3 cut(s) | 294, 375, 1134 |
| TscAI | CASTG | 1 cut(s) | 597 |
| TseFI | GTSAC | 3 cut(s) | 592, 979, 1334 |
| Tsp45I | GTSAC | 3 cut(s) | 592, 979, 1334 |
| TspDTI | ATGAA | 5 cut(s) | 204, 234, 835, 916, 1193 |
| TspGWI | ACGGA | 2 cut(s) | 817, 1130 |
| TspRI | CASTG | 1 cut(s) | 597 |
| Vha464I | CTTAAG | 1 cut(s) | 1133 |
| XapI | RAATTY | 2 cut(s) | 454, 671 |
| XmaJI | CCTAGG | 1 cut(s) | 1057 |
| XspI | CTAG | 3 cut(s) | 638, 719, 1058 |
| ZrmI | AGTACT | 2 cut(s) | 17, 1319 |