AT5G01830

U-box domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0014160
Physical Location & Seq
Forward (+)
320349 .. 323213
2865 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G01830.1

Sequence Viewer

Length: 2025 bp
ATGGCTGTTACTCTTGATTCTCCTTCTCCGGCGAGAAAACGTCGCCCTTTGGTCGTCGGGTCATTCGAATCTCCGAAGCTTTCTTCAGATACCAAACTGACTCGGTCTCTGTTTCTGGCGTCTCATGAGATTTCTTCTATGCAGCCTCTCCCATTCATTCTCCGACGCAATTCTCTCTCCCTCATTCGCAAAGTGAAGATATTAGCTTCCGTCTTCGATGAGCTTCTTCTCCCTCGTTCCCAACTTGTCGTCTACTCTCAATCCGCTCATCTCTGCTTCGAAGAAATGCAAATCGTTATGCAACGTATCAAGTCTTTGATCGATGACTGTTCTCGTGTTAGCAAACTCTGGCTACTCTTGCAGATCGACATCGTTGCCTTCAACTTTCACGAGCTTGTCACCGATTTATCCACCGTTCTTGATATTTTACCGCTCCATGACTTTGACCTCAGCGACGACGCCCAAGATCTCATCTCTCTCCTTACAAAACAATGCTCCGATTCTGTTCAGTTCGTCGACGCCCGCGACGTTGCTCTCCGTCGTAAAGTCACCGATACAATCGCCGGGATCAAGCACCAGATCTCACCGGATCACTCTACTCTCATCAAGATTTTCAACGACCTTGGTTTATCCGATTCTGCTAGTTTGACCGACGAAATTCAGAGATTGGAAGACGAGATTCAGGATCAGATCGACGACAGATCCAAATCCGCAGCCGCCTCTCTTATCGGACTCGTCCGTTACTCTAAGTGCGTCTTATACGGTCCCTCCACGCCGGCTCCAGATTTCCGCCGCCACCAATCCTTATCTGACGCTAACATCCCCGCGGATTTCCGGTGTCCGATCACCCTCGAGCTGATGCGGGATCCGGTGGTGGTTGCCACCGGTCAAACATACGATAGAGAGTCCATCGATCTTTGGATCCAATCGGGGCATAACACGTGTCCGAAAACAGGTCAAGTCCTCAAACACACCAGCCTCGTACCTAACCGTGCCTTGAAGAACCTCATCGTTTTGTGGTGCCGCGATCAGAAGATACCGTTCGAATTATACGGTGACGGCGGCGGAGAACCTGCGCCGTGCAAGGAGGCGGTGGAGTTTACGAAGATGATGGTTTCGTTTCTCATCGAGAAGCTCTCCGTGGCAGATTCTAACGGTGTCGTGTTCGAGCTCCGGGCGCTCGCAAAGTCAGATACTGTGGCCCGAGCCTGCATAGCCGAGGCTGGAGCCATACCCAAGCTGGTTCGTTATCTAGCCACAGAGTGCCCGAGCCTTCAGATAAACGCCGTTACGACGATCCTAAACCTATCCATCCTGGAACAGAACAAAACGAGGATCATGGAAACTGACGGAGCTTTAAACGGCGTCATCGAGGTTCTTCGTTCGGGTGCCACGTGGGAGGCTAAGGCTAACGCAGCCGCGACATTGTTCAGTTTGGCGGGCGTCTCGGCATACAGAAGAAGACTCGGGAGAAAAGCACGTGTCGTAAGCGGATTGGTTGACTTGGCTAAGCAGGGCCCCACCAGCTCTAAGAGAGACGCGCTCGTGGCGATCCTAAACCTGGTGGCTGAGAGAGAGAACGTGGGGAGGTTCGTTGAGGCTGGGGTAATGGGAGCCGCAGGAGATGCATTCCAGGAGCTACCGGAGGAAGCGGTGGCTGTCGTGGAGGCGGTGGTCAGGAGGGGAGGACTCATGGCGGTTTCTGCCGCTTTCAGTTTGATTCGACTTTTGGGGGAGGTGATGAGAGAAGGAGCGGATACCACAAGGGAGAGTGCGGCGGCAACGCTGGTCACGATGTGTCGGAAAGGAGGGTCGGAGCTAGTGGCGGAGATGGCGGCTATTCCAGGGATAGAGAGGGTTATATGGGAGATGATAGGAGCTGGAACGGCCAGGGGAGGGAGGAAAGCGGCGTCATTGATGAGATATCTAAGACGGTGGGCCGCCGGAGATACCCATAACACGGCGGCGGAAACGCAGAGCATTGTAGTGCCAACGCCAAGTAGGATTTTTAGTCCAGTTTTATGA

Protein Analysis

674

Amino Acids

73.6

Weight (kDa)

6.82

Isoelectric Point (pI)

44.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PUB10_N PF25368 55 - 164 2.4e-10 PUB10-like, N-terminal domain
U-box PF04564 274 - 345 4e-20 U-box domain
ARM_PUB PF25598 375 - 621 2.8e-08 Plant U-box protein ARM repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014160)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G01830
fragaria_vesca FvH4_5g29050
malus_domestica MD04G1172400.v1.1 MD12G1185600.v1.1
prunus_persica Prupe.6G290800_v2.0.a1
pyrus_communis pycom04g15230 pycom12g17420
rosa_chinensis RchiOBHm_Chr3g0460861
rosa_laevigata RLG00000024973
rosa_multiflora Rmu_sc0009011.1_g000007
rosa_roxburghii Rroxscaffold_6G00419150
rosa_rugosa Rorug03G0047000
rosa_samantha Rh3AG104100 Rh3BG107800 Rh3CG109600 Rh3DG109600
rosa_wichuraiana Rw3G008860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1081
AccB1I GGYRCC 2 cut(s) 1020, 1388
AccBSI CCGCTC 3 cut(s) 266, 433, 1754
AccI GTMKAC 2 cut(s) 252, 516
AccII CGCG 5 cut(s) 525, 827, 1026, 1421, 1541
AcoI YGGCCR 1 cut(s) 1887
AcsI RAATTY 1 cut(s) 657
AcuI CTGAAG 2 cut(s) 69, 1259
AcvI CACGTG 3 cut(s) 942, 1395, 1481
AcyI GRCGYC 6 cut(s) 119, 459, 519, 1365, 1443, 1910
AdeI CACNNNGTG 2 cut(s) 1263, 1797
AfaI GTAC 1 cut(s) 984
AfiI CCNNNNNNNGG 4 cut(s) 953, 1561, 1896, 1960
AflIII ACRYGT 3 cut(s) 939, 941, 1480
AgeI ACCGGT 1 cut(s) 884
AgsI TTSAA 3 cut(s) 382, 616, 1000
AjnI CCWGG 5 cut(s) 1314, 1560, 1632, 1843, 1889
Alw21I GWGCWC 1 cut(s) 1173
Alw26I GTCTC 4 cut(s) 111, 126, 1450, 1530
AlwNI CAGNNNCTG 1 cut(s) 1196
Ama87I CYCGRG 4 cut(s) 851, 1203, 1267, 1466
AoxI GGCC 4 cut(s) 1200, 1516, 1887, 1938
ApaI GGGCCC 1 cut(s) 1520
ApeKI GCWGC 3 cut(s) 142, 713, 1415
ApoI RAATTY 1 cut(s) 657
AsiGI ACCGGT 1 cut(s) 884
AspLEI GCGC 3 cut(s) 1078, 1180, 1543
AspS9I GGNCC 5 cut(s) 764, 1201, 1516, 1517, 1938
AsuC2I CCSGG 2 cut(s) 565, 1175
AsuHPI GGTGA 6 cut(s) 391, 541, 576, 838, 1067, 1750
AsuII TTCGAA 3 cut(s) 66, 279, 1044
AvaI CYCGRG 4 cut(s) 851, 1203, 1267, 1466
AvaII GGWCC 1 cut(s) 764
BaeGI GKGCMC 2 cut(s) 1268, 1520
BamHI GGATCC 2 cut(s) 865, 921
BanI GGYRCC 2 cut(s) 1020, 1388
BanII GRGCYC 2 cut(s) 1173, 1520
BauI CACGAG 3 cut(s) 333, 389, 1544
BbrPI CACGTG 3 cut(s) 942, 1395, 1481
BbsI GAAGAC 3 cut(s) 205, 678, 1468
Bbv12I GWGCWC 1 cut(s) 1173
BbvCI CCTCAGC 1 cut(s) 449
BbvI GCAGC 3 cut(s) 154, 725, 1427
BccI CCATC 4 cut(s) 917, 1105, 1319, 1825
BceAI ACGGC 6 cut(s) 1063, 1075, 1271, 1378, 1902, 1977
BcgI CGANNNNNNTGC 2 cut(s) 356, 390
BciT130I CCWGG 5 cut(s) 1316, 1562, 1634, 1845, 1891
BciVI GTATCC 1 cut(s) 1750
BcnI CCSGG 2 cut(s) 565, 1175
BcoDI GTCTC 4 cut(s) 111, 126, 1450, 1530
BfaI CTAG 3 cut(s) 642, 1253, 1820
BfoI RGCGCY 1 cut(s) 1181
BfuAI ACCTGC 1 cut(s) 1081
BfuI GTATCC 1 cut(s) 1750
BglII AGATCT 2 cut(s) 466, 579
BlpI GCTNAGC 1 cut(s) 1509
Bme1390I CCNGG 7 cut(s) 565, 1175, 1316, 1562, 1634, 1845, 1891
Bme18I GGWCC 1 cut(s) 764
BmeT110I CYCGRG 4 cut(s) 851, 1203, 1267, 1466
BmgT120I GGNCC 5 cut(s) 764, 1201, 1516, 1517, 1938
BmrFI CCNGG 7 cut(s) 565, 1175, 1316, 1562, 1634, 1845, 1891
BmsI GCATC 2 cut(s) 849, 1615
BpiI GAAGAC 3 cut(s) 205, 678, 1468
BplI GAGNNNNNCTC 4 cut(s) 1121, 1153, 1527, 1559
BpmI CTGGAG 2 cut(s) 765, 1245
Bpu10I CCTNAGC 2 cut(s) 449, 1404
Bpu1102I GCTNAGC 1 cut(s) 1509
Bpu14I TTCGAA 3 cut(s) 66, 279, 1044
BpuMI CCSGG 2 cut(s) 565, 1175
Bsa29I ATCGAT 2 cut(s) 321, 912
BsaAI YACGTR 3 cut(s) 942, 1395, 1481
BsaBI GATNNNNATC 2 cut(s) 368, 706
BsaHI GRCGYC 6 cut(s) 119, 459, 519, 1365, 1443, 1910
BsaI GGTCTC 1 cut(s) 111
BsaJI CCNNGG 6 cut(s) 622, 825, 1140, 1218, 1844, 1890
BsaWI WCCGGW 5 cut(s) 586, 834, 868, 884, 1642
BsaXI ACNNNNNCTCC 4 cut(s) 752, 763, 782, 793
Bsc4I CCNNNNNNNGG 4 cut(s) 953, 1561, 1896, 1960
Bse118I RCCGGY 2 cut(s) 775, 884
Bse1I ACTGG 1 cut(s) 2015
Bse8I GATNNNNATC 2 cut(s) 368, 706
BseBI CCWGG 5 cut(s) 1316, 1562, 1634, 1845, 1891
BseCI ATCGAT 2 cut(s) 321, 912
BseDI CCNNGG 6 cut(s) 622, 825, 1140, 1218, 1844, 1890
BseGI GGATG 2 cut(s) 819, 1311
BseJI GATNNNNATC 2 cut(s) 368, 706
BseLI CCNNNNNNNGG 4 cut(s) 953, 1561, 1896, 1960
BseMII CTCAG 2 cut(s) 463, 1560
BseNI ACTGG 1 cut(s) 2015
BseSI GKGCMC 2 cut(s) 1268, 1520
BseXI GCAGC 3 cut(s) 154, 725, 1427
BseYI CCCAGC 1 cut(s) 1601
Bsh1236I CGCG 5 cut(s) 525, 827, 1026, 1421, 1541
BshFI GGCC 4 cut(s) 1202, 1518, 1889, 1940
BshNI GGYRCC 2 cut(s) 1020, 1388
BshTI ACCGGT 1 cut(s) 884
BshVI ATCGAT 2 cut(s) 321, 912
BsiHKAI GWGCWC 1 cut(s) 1173
BsiHKCI CYCGRG 4 cut(s) 851, 1203, 1267, 1466
BslFI GGGAC 1 cut(s) 750
BslI CCNNNNNNNGG 4 cut(s) 953, 1561, 1896, 1960
BsmAI GTCTC 4 cut(s) 111, 126, 1450, 1530
BsmBI CGTCTC 3 cut(s) 126, 1450, 1530
BsmFI GGGAC 1 cut(s) 750
BsmI GAATGC 1 cut(s) 1628
BsnI GGCC 4 cut(s) 1202, 1518, 1889, 1940
Bso31I GGTCTC 1 cut(s) 111
BsoBI CYCGRG 4 cut(s) 851, 1203, 1267, 1466
Bsp119I TTCGAA 3 cut(s) 66, 279, 1044
Bsp120I GGGCCC 1 cut(s) 1516
Bsp1286I GDGCHC 3 cut(s) 1173, 1268, 1520
Bsp1720I GCTNAGC 1 cut(s) 1509
BspANI GGCC 4 cut(s) 1202, 1518, 1889, 1940
BspCNI CTCAG 2 cut(s) 462, 1561
BspDI ATCGAT 2 cut(s) 321, 912
BspFNI CGCG 5 cut(s) 525, 827, 1026, 1421, 1541
BspHI TCATGA 1 cut(s) 124
BspMI ACCTGC 1 cut(s) 1081
BspT104I TTCGAA 3 cut(s) 66, 279, 1044
BspT107I GGYRCC 2 cut(s) 1020, 1388
BspTNI GGTCTC 1 cut(s) 111
BsrBI CCGCTC 3 cut(s) 266, 433, 1754
BsrFI RCCGGY 2 cut(s) 775, 884
BsrI ACTGG 1 cut(s) 2015
BssAI RCCGGY 2 cut(s) 775, 884
BssECI CCNNGG 6 cut(s) 622, 825, 1140, 1218, 1844, 1890
BssNI GRCGYC 6 cut(s) 119, 459, 519, 1365, 1443, 1910
BssSI CACGAG 3 cut(s) 333, 389, 1544
BssT1I CCWWGG 1 cut(s) 622
Bst2BI CACGAG 3 cut(s) 333, 389, 1544
Bst2UI CCWGG 5 cut(s) 1316, 1562, 1634, 1845, 1891
Bst4CI ACNGT 9 cut(s) 329, 415, 764, 992, 1041, 1055, 1157, 1198, 1935
BstACI GRCGYC 6 cut(s) 119, 459, 519, 1365, 1443, 1910
BstAPI GCANNNNNTGC 1 cut(s) 1625
BstBAI YACGTR 3 cut(s) 942, 1395, 1481
BstBI TTCGAA 3 cut(s) 66, 279, 1044
BstC8I GCNNGC 5 cut(s) 523, 777, 1182, 1210, 1441
BstDEI CTNAG 7 cut(s) 449, 747, 1404, 1509, 1530, 1569, 1928
BstDSI CCRYGG 2 cut(s) 825, 1140
BstF5I GGATG 2 cut(s) 819, 1311
BstFNI CGCG 5 cut(s) 525, 827, 1026, 1421, 1541
BstH2I RGCGCY 1 cut(s) 1181
BstHHI GCGC 3 cut(s) 1078, 1180, 1543
BstMAI GTCTC 4 cut(s) 111, 126, 1450, 1530
BstNI CCWGG 5 cut(s) 1316, 1562, 1634, 1845, 1891
BstSCI CCNGG 7 cut(s) 563, 1173, 1314, 1560, 1632, 1843, 1889
BstSLI GKGCMC 2 cut(s) 1268, 1520
BstUI CGCG 5 cut(s) 525, 827, 1026, 1421, 1541
BstV1I GCAGC 3 cut(s) 154, 725, 1427
BstV2I GAAGAC 3 cut(s) 205, 678, 1468
BstX2I RGATCY 5 cut(s) 466, 579, 701, 865, 921
BstYI RGATCY 5 cut(s) 466, 579, 701, 865, 921
Bsu15I ATCGAT 2 cut(s) 321, 912
BsuI GTATCC 1 cut(s) 1750
BsuRI GGCC 4 cut(s) 1202, 1518, 1889, 1940
BsuTUI ATCGAT 2 cut(s) 321, 912
BtgI CCRYGG 2 cut(s) 825, 1140
BtsCI GGATG 2 cut(s) 819, 1311
BveI ACCTGC 1 cut(s) 1081
Cac8I GCNNGC 5 cut(s) 523, 777, 1182, 1210, 1441
CaiI CAGNNNCTG 1 cut(s) 1196
CciI TCATGA 1 cut(s) 124
CfoI GCGC 3 cut(s) 1078, 1180, 1543
Cfr10I RCCGGY 2 cut(s) 775, 884
Cfr13I GGNCC 5 cut(s) 764, 1201, 1516, 1517, 1938
Cfr42I CCGCGG 1 cut(s) 828
ClaI ATCGAT 2 cut(s) 321, 912
CsiI ACCWGGT 1 cut(s) 1560
Csp6I GTAC 1 cut(s) 983
CspAI ACCGGT 1 cut(s) 884
CspCI CAANNNNNGTGG 2 cut(s) 400, 435
CviAII CATG 4 cut(s) 125, 437, 1339, 1693
CviQI GTAC 1 cut(s) 983
DdeI CTNAG 7 cut(s) 449, 747, 1404, 1509, 1530, 1569, 1928
DraI TTTAAA 1 cut(s) 1359
DraIII CACNNNGTG 2 cut(s) 1263, 1797
EaeI YGGCCR 1 cut(s) 1887
EciI GGCGGA 4 cut(s) 779, 1080, 1841, 1982
Ecl136II GAGCTC 1 cut(s) 1171
Eco130I CCWWGG 1 cut(s) 622
Eco24I GRGCYC 2 cut(s) 1173, 1520
Eco31I GGTCTC 1 cut(s) 111
Eco32I GATATC 1 cut(s) 1925
Eco47I GGWCC 1 cut(s) 764
Eco53kI GAGCTC 1 cut(s) 1171
Eco57I CTGAAG 2 cut(s) 69, 1259
Eco72I CACGTG 3 cut(s) 942, 1395, 1481
Eco88I CYCGRG 4 cut(s) 851, 1203, 1267, 1466
EcoICRI GAGCTC 1 cut(s) 1171
EcoO109I RGGNCCY 2 cut(s) 1516, 1517
EcoRII CCWGG 5 cut(s) 1314, 1560, 1632, 1843, 1889
EcoRV GATATC 1 cut(s) 1925
EcoT14I CCWWGG 1 cut(s) 622
EcoT22I ATGCAT 1 cut(s) 1630
EcoT38I GRGCYC 2 cut(s) 1173, 1520
ErhI CCWWGG 1 cut(s) 622
Esp3I CGTCTC 3 cut(s) 126, 1450, 1530
FaeI CATG 4 cut(s) 128, 440, 1342, 1696
FalI AAGNNNNNCTT 2 cut(s) 740, 772
FaqI GGGAC 1 cut(s) 750
FatI CATG 4 cut(s) 124, 436, 1338, 1692
FauI CCCGC 4 cut(s) 530, 832, 855, 1432
FblI GTMKAC 2 cut(s) 252, 516
FokI GGATG 2 cut(s) 806, 1298
FriOI GRGCYC 2 cut(s) 1173, 1520
FspBI CTAG 3 cut(s) 642, 1253, 1820
GlaI GCGC 3 cut(s) 1077, 1179, 1542
GsaI CCCAGC 1 cut(s) 1605
GsuI CTGGAG 2 cut(s) 765, 1245
HaeII RGCGCY 1 cut(s) 1181
HaeIII GGCC 4 cut(s) 1202, 1518, 1889, 1940
HhaI GCGC 3 cut(s) 1078, 1180, 1543
Hin1I GRCGYC 6 cut(s) 119, 459, 519, 1365, 1443, 1910
Hin1II CATG 4 cut(s) 128, 440, 1342, 1696
Hin6I GCGC 3 cut(s) 1076, 1178, 1541
HinP1I GCGC 3 cut(s) 1076, 1178, 1541
HincII GTYRAC 2 cut(s) 517, 1501
HindII GTYRAC 2 cut(s) 517, 1501
HindIII AAGCTT 1 cut(s) 77
HphI GGTGA 6 cut(s) 391, 541, 576, 838, 1067, 1750
Hpy166II GTNNAC 4 cut(s) 253, 517, 1101, 1501
Hpy8I GTNNAC 4 cut(s) 253, 517, 1101, 1501
HpyAV CCTTC 4 cut(s) 33, 388, 1283, 1742
HpyCH4III ACNGT 9 cut(s) 329, 415, 764, 992, 1041, 1055, 1157, 1198, 1935
HpyCH4IV ACGT 7 cut(s) 40, 304, 528, 941, 1394, 1480, 1581
HpyCH4V TGCA 7 cut(s) 142, 289, 301, 361, 1083, 1212, 1628
HpyF3I CTNAG 7 cut(s) 449, 747, 1404, 1509, 1530, 1569, 1928
HpySE526I ACGT 7 cut(s) 40, 304, 528, 941, 1394, 1480, 1581
Hsp92I GRCGYC 6 cut(s) 119, 459, 519, 1365, 1443, 1910
Hsp92II CATG 4 cut(s) 128, 440, 1342, 1696
HspAI GCGC 3 cut(s) 1076, 1178, 1541
KroI GCCGGC 1 cut(s) 775
KroNI GCCGGC 1 cut(s) 777
KspI CCGCGG 1 cut(s) 828
Lsp1109I GCAGC 3 cut(s) 154, 725, 1427
LweI GCATC 2 cut(s) 849, 1615
MabI ACCWGGT 1 cut(s) 1560
MaeI CTAG 3 cut(s) 642, 1253, 1820
MaeII ACGT 7 cut(s) 40, 304, 528, 941, 1394, 1480, 1581
MaeIII GTNAC 7 cut(s) 7, 397, 547, 740, 1055, 1288, 1789
MbiI CCGCTC 3 cut(s) 266, 433, 1754
MflI RGATCY 5 cut(s) 466, 579, 701, 865, 921
MhlI GDGCHC 3 cut(s) 1173, 1268, 1520
MluCI AATT 3 cut(s) 169, 657, 1046
MlyI GAGTC 5 cut(s) 94, 726, 914, 1458, 1683
MmeI TCCRAC 3 cut(s) 187, 1781, 1794
Mph1103I ATGCAT 1 cut(s) 1630
MroNI GCCGGC 1 cut(s) 775
MseI TTAA 1 cut(s) 1358
MslI CAYNNNNRTG 1 cut(s) 1985
MspA1I CMGCKG 1 cut(s) 827
MspR9I CCNGG 7 cut(s) 565, 1175, 1316, 1562, 1634, 1845, 1891
Mva1269I GAATGC 1 cut(s) 1628
MvaI CCWGG 5 cut(s) 1316, 1562, 1634, 1845, 1891
MvnI CGCG 5 cut(s) 525, 827, 1026, 1421, 1541
NaeI GCCGGC 1 cut(s) 777
NciI CCSGG 2 cut(s) 565, 1175
NgoMIV GCCGGC 1 cut(s) 775
NlaIII CATG 4 cut(s) 128, 440, 1342, 1696
NmeAIII GCCGAG 2 cut(s) 1243, 1427
NmuCI GTSAC 4 cut(s) 397, 547, 1055, 1789
NsiI ATGCAT 1 cut(s) 1630
NspV TTCGAA 3 cut(s) 66, 279, 1044
PaeR7I CTCGAG 1 cut(s) 851
PagI TCATGA 1 cut(s) 124
PcsI WCGNNNNNNNCGW 6 cut(s) 63, 522, 525, 1368, 1391, 1790
PctI GAATGC 1 cut(s) 1628
PdiI GCCGGC 1 cut(s) 777
PfeI GAWTC 7 cut(s) 17, 68, 500, 635, 679, 1148, 1720
PflFI GACNNNGTC 1 cut(s) 103
PfoI TCCNGGA 2 cut(s) 1314, 1632
PinAI ACCGGT 1 cut(s) 884
PleI GAGTC 5 cut(s) 94, 726, 913, 1458, 1683
PmaCI CACGTG 3 cut(s) 942, 1395, 1481
PmlI CACGTG 3 cut(s) 942, 1395, 1481
PpsI GAGTC 5 cut(s) 94, 726, 913, 1458, 1683
Ppu21I YACGTR 3 cut(s) 942, 1395, 1481
Psp124BI GAGCTC 1 cut(s) 1173
Psp6I CCWGG 5 cut(s) 1314, 1560, 1632, 1843, 1889
PspCI CACGTG 3 cut(s) 942, 1395, 1481
PspFI CCCAGC 1 cut(s) 1601
PspGI CCWGG 5 cut(s) 1314, 1560, 1632, 1843, 1889
PspOMI GGGCCC 1 cut(s) 1516
PspPI GGNCC 5 cut(s) 764, 1201, 1516, 1517, 1938
PspXI VCTCGAGB 1 cut(s) 851
PstNI CAGNNNCTG 1 cut(s) 1196
PsuI RGATCY 5 cut(s) 466, 579, 701, 865, 921
PsyI GACNNNGTC 1 cut(s) 103
RsaI GTAC 1 cut(s) 984
RsaNI GTAC 1 cut(s) 983
RseI CAYNNNNRTG 1 cut(s) 1985
SacI GAGCTC 1 cut(s) 1173
SacII CCGCGG 1 cut(s) 828
SalI GTCGAC 1 cut(s) 515
SaqAI TTAA 1 cut(s) 1358
Sau96I GGNCC 5 cut(s) 764, 1201, 1516, 1517, 1938
SchI GAGTC 5 cut(s) 94, 726, 914, 1458, 1683
ScrFI CCNGG 7 cut(s) 565, 1175, 1316, 1562, 1634, 1845, 1891
SduI GDGCHC 3 cut(s) 1173, 1268, 1520
SexAI ACCWGGT 1 cut(s) 1560
SfaNI GCATC 2 cut(s) 849, 1615
Sfr274I CTCGAG 1 cut(s) 851
Sfr303I CCGCGG 1 cut(s) 828
SfuI TTCGAA 3 cut(s) 66, 279, 1044
SgrBI CCGCGG 1 cut(s) 828
SgrDI CGTCGACG 1 cut(s) 515
SinI GGWCC 1 cut(s) 764
SlaI CTCGAG 1 cut(s) 851
SmiMI CAYNNNNRTG 1 cut(s) 1985
SmlI CTYRAG 1 cut(s) 851
SmoI CTYRAG 1 cut(s) 851
Sse9I AATT 3 cut(s) 169, 657, 1046
SspMI CTAG 3 cut(s) 642, 1253, 1820
SstI GAGCTC 1 cut(s) 1173
StyD4I CCNGG 7 cut(s) 563, 1173, 1314, 1560, 1632, 1843, 1889
StyI CCWWGG 1 cut(s) 622
TaaI ACNGT 9 cut(s) 329, 415, 764, 992, 1041, 1055, 1157, 1198, 1935
TaiI ACGT 7 cut(s) 43, 307, 531, 944, 1397, 1483, 1584
TaqII GACCGA 2 cut(s) 93, 665
TasI AATT 3 cut(s) 169, 657, 1046
TfiI GAWTC 7 cut(s) 17, 68, 500, 635, 679, 1148, 1720
Tru1I TTAA 1 cut(s) 1358
Tru9I TTAA 1 cut(s) 1358
TseFI GTSAC 4 cut(s) 397, 547, 1055, 1789
TseI GCWGC 3 cut(s) 142, 713, 1415
Tsp45I GTSAC 4 cut(s) 397, 547, 1055, 1789
TspDTI ATGAA 1 cut(s) 145
TspGWI ACGGA 5 cut(s) 199, 527, 728, 1129, 1365
Tth111I GACNNNGTC 1 cut(s) 103
VpaK11BI GGWCC 1 cut(s) 764
XapI RAATTY 1 cut(s) 657
XcmI CCANNNNNNNNNTGG 1 cut(s) 1237
XhoI CTCGAG 1 cut(s) 851
XmiI GTMKAC 2 cut(s) 252, 516
XspI CTAG 3 cut(s) 642, 1253, 1820
Zsp2I ATGCAT 1 cut(s) 1630
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.