Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0014160

Physical Location & Seq

Genomic Coordinates Forward (+)

26386553 .. 26387764

Gene Structure 1212 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1172400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1212 bp

ATGCGGGACCCGGTCACCGTGGCGACCGGCCAGACGTACGATCGTGAGTCCATCAAGCTGTGGATCGAAGCGGGTCACAACACGTGTCCCAAGACAGGTCAGGCCCTGGCCCACACTGAGCTCATCCGCAACCTCGCGTTGAAAAATCTCATCGCCATGTGGTGCCGCCAGCAGAAAATCCCTTTCGAAACCGCGGCGAAGAATAAGGGGCTGGTCAACGCCGTTAAAAAGAACAAGGCCGCGCTCGAAGCTACCAGAATGACGGCGTCGTTTCTGGTCAATAAGCTTTCGGTGTCTCAGTCTATGGAGGCGGCTAACGGCGTCGTTTACGAGCTCCGGAGTCTGGCGAAGACGGACGCTGACTGTCGCGCCTGCATTGCGGAAGCCGGGGCTATTCCTTTGCTCGTACGGTACCTGGGCGCGGACGTCGGTGGGCCCCATCCGAACCTGCAGGTTAACGCCGTGACGACGATTCTAAACCTTTCTATTTTGGAAGCGAACAAAACGCGGATCATGGAGACGGACGGAGCTCTTAACGGCATCATCGAGGTGCTGAGGTCGGGGGCCACGTGGGAGGCGAAGGGGAATGCGGCGGCGACGATATTCAGTTTATCAGGTGTGCATGGGTACAGGAAGAGACTGGGGAGGAAGACACGCGTCATAAAGGGGTTAGTGGAGCTGGCGAGGGATGGACCCGAGCACGGATGTTTTAAAAAGGACGCCATGGTGGCGATATTGAATTTGGCGGGAGAGAGGGAGGCAGTGGCTAGATTGGTGGAAGGTGGGGTGGTGGAGACGACCTTGCAAGTGATGGAGGCGTTGCCGGAGGAGGCGGTGGCTGTGTTGGAAATTGTGGTTAGAAGCGGCGGATTAGTGGCCATTGCGGCGGCGTACGGCGCGATTAGAAAATTGGGAAGTGTGTTGAGAGAAGGGTCGGAGAGGGCGAGGGAGAGCGCGGCGGCGACGCTGGTGACAATTTGTCGAAAAGGGGGATCGGAAATGGTGGCGGAATTGGCGTCAGTGCCGGGGATTGAGAGGATGATATGGGAATTGATGGGGGTGGGGACGGTGAGGGCGAGGCGGAAGGCGGCGTCGCTGTTGAGGATTCTGAGGAGATGGGCTGCGGGTTTGGGTAGTGAGGTTGCGGAGGTGGGATATTCAACGGTGAATCATGTGAGTACATCGGCAACAGCGACAATAGTGGCAATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0008150 GO:0010033 GO:0010200 GO:0010243 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050896 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

404

Amino Acids

42.94

Weight (kDa)

9.49

Isoelectric Point (pI)

31.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U-box	PF04564	1 - 59	7.5e-13	U-box domain
ARM_PUB	PF25598	93 - 372	2.4e-16	Plant U-box protein ARM repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014160)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01830
fragaria_vesca	FvH4_5g29050
malus_domestica	MD04G1172400.v1.1 MD12G1185600.v1.1
prunus_persica	Prupe.6G290800_v2.0.a1
pyrus_communis	pycom04g15230 pycom12g17420
rosa_chinensis	RchiOBHm_Chr3g0460861
rosa_laevigata	RLG00000024973
rosa_multiflora	Rmu_sc0009011.1_g000007
rosa_roxburghii	Rroxscaffold_6G00419150
rosa_rugosa	Rorug03G0047000
rosa_samantha	Rh3AG104100 Rh3BG107800 Rh3CG109600 Rh3DG109600
rosa_wichuraiana	Rw3G008860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	429
Acc36I	ACCTGC	2 cut(s)	442, 456
Acc65I	GGTACC	1 cut(s)	411
AccB1I	GGYRCC	2 cut(s)	162, 411
AccII	CGCG	9 cut(s)	137, 194, 242, 369, 422, 508, 657, 899, 956
AccIII	TCCGGA	1 cut(s)	336
AclWI	GGATC	3 cut(s)	71, 518, 1000
AcoI	YGGCCR	2 cut(s)	28, 876
AcsI	RAATTY	1 cut(s)	739
AcvI	CACGTG	2 cut(s)	84, 570
AcyI	GRCGYC	6 cut(s)	266, 321, 426, 720, 1016, 1091
AfaI	GTAC	6 cut(s)	38, 408, 413, 629, 893, 1180
AfiI	CCNNNNNNNGG	4 cut(s)	95, 343, 421, 701
AflIII	ACRYGT	3 cut(s)	81, 83, 655
AgsI	TTSAA	3 cut(s)	142, 739, 1161
AhdI	GACNNNNNGTC	1 cut(s)	978
AjnI	CCWGG	2 cut(s)	105, 414
AluBI	AGCT	7 cut(s)	58, 121, 251, 286, 334, 530, 679
AluI	AGCT	7 cut(s)	58, 121, 251, 286, 334, 530, 679
Alw21I	GWGCWC	4 cut(s)	123, 336, 532, 702
Alw26I	GTCTC	4 cut(s)	300, 512, 631, 788
AlwI	GGATC	3 cut(s)	71, 518, 1000
AlwNI	CAGNNNCTG	1 cut(s)	106
Ama87I	CYCGRG	1 cut(s)	695
Aor13HI	TCCGGA	1 cut(s)	336
AoxI	GGCC	7 cut(s)	28, 102, 108, 237, 434, 564, 876
ApaI	GGGCCC	1 cut(s)	438
ApeKI	GCWGC	1 cut(s)	1121
ApoI	RAATTY	1 cut(s)	739
Asp718I	GGTACC	1 cut(s)	411
AspLEI	GCGC	5 cut(s)	244, 371, 422, 899, 956
AspS9I	GGNCC	7 cut(s)	7, 103, 109, 434, 435, 564, 692
AsuC2I	CCSGG	3 cut(s)	11, 388, 1026
AsuHPI	GGTGA	4 cut(s)	7, 982, 1081, 1177
AsuII	TTCGAA	1 cut(s)	186
AvaI	CYCGRG	1 cut(s)	695
AvaII	GGWCC	2 cut(s)	7, 692
BaeGI	GKGCMC	1 cut(s)	438
BalI	TGGCCA	1 cut(s)	878
BanI	GGYRCC	2 cut(s)	162, 411
BanII	GRGCYC	4 cut(s)	123, 336, 438, 532
BbrPI	CACGTG	2 cut(s)	84, 570
BbsI	GAAGAC	2 cut(s)	356, 656
Bbv12I	GWGCWC	4 cut(s)	123, 336, 532, 702
BbvCI	CCTCAGC	1 cut(s)	554
BbvI	GCAGC	1 cut(s)	1108
BccI	CCATC	6 cut(s)	59, 447, 683, 805, 1048, 1110
BceAI	ACGGC	6 cut(s)	206, 279, 334, 446, 553, 910
BciT130I	CCWGG	2 cut(s)	107, 416
BcnI	CCSGG	3 cut(s)	11, 388, 1026
BcoDI	GTCTC	4 cut(s)	300, 512, 631, 788
BfaI	CTAG	1 cut(s)	768
BfmI	CTRYAG	1 cut(s)	449
BfuAI	ACCTGC	2 cut(s)	442, 456
BglI	GCCNNNNNGGC	2 cut(s)	728, 884
Bme1390I	CCNGG	5 cut(s)	11, 107, 388, 416, 1026
Bme18I	GGWCC	2 cut(s)	7, 692
BmeRI	GACNNNNNGTC	1 cut(s)	978
BmeT110I	CYCGRG	1 cut(s)	695
BmgT120I	GGNCC	7 cut(s)	7, 103, 109, 434, 435, 564, 692
BmiI	GGNNCC	8 cut(s)	8, 9, 164, 413, 436, 437, 565, 694
BmrFI	CCNGG	5 cut(s)	11, 107, 388, 416, 1026
BmrI	ACTGGG	1 cut(s)	650
BmsI	GCATC	1 cut(s)	549
BmuI	ACTGGG	1 cut(s)	650
BoxI	GACNNNNGTC	1 cut(s)	656
BpiI	GAAGAC	2 cut(s)	356, 656
Bpu10I	CCTNAGC	1 cut(s)	554
Bpu14I	TTCGAA	1 cut(s)	186
BpuMI	CCSGG	3 cut(s)	11, 388, 1026
BsaAI	YACGTR	2 cut(s)	84, 570
BsaHI	GRCGYC	6 cut(s)	266, 321, 426, 720, 1016, 1091
BsaJI	CCNNGG	7 cut(s)	18, 105, 192, 387, 415, 723, 1025
BsaWI	WCCGGW	1 cut(s)	336
Bsc4I	CCNNNNNNNGG	4 cut(s)	95, 343, 421, 701
Bse118I	RCCGGY	1 cut(s)	26
Bse1I	ACTGG	1 cut(s)	645
Bse3DI	GCAATG	2 cut(s)	375, 879
BseAI	TCCGGA	1 cut(s)	336
BseBI	CCWGG	2 cut(s)	107, 416
BseDI	CCNNGG	7 cut(s)	18, 105, 192, 387, 415, 723, 1025
BseGI	GGATG	5 cut(s)	123, 439, 694, 710, 1044
BseLI	CCNNNNNNNGG	4 cut(s)	95, 343, 421, 701
BseMI	GCAATG	2 cut(s)	375, 879
BseMII	CTCAG	4 cut(s)	108, 311, 545, 1100
BseNI	ACTGG	1 cut(s)	645
BseRI	GAGGAG	2 cut(s)	842, 1126
BseSI	GKGCMC	1 cut(s)	438
BseXI	GCAGC	1 cut(s)	1108
Bsh1236I	CGCG	9 cut(s)	137, 194, 242, 369, 422, 508, 657, 899, 956
Bsh1285I	CGRYCG	2 cut(s)	27, 43
BshFI	GGCC	7 cut(s)	30, 104, 110, 239, 436, 566, 878
BshNI	GGYRCC	2 cut(s)	162, 411
BsiEI	CGRYCG	2 cut(s)	27, 43
BsiHKAI	GWGCWC	4 cut(s)	123, 336, 532, 702
BsiHKCI	CYCGRG	1 cut(s)	695
BsiSI	CCGG	6 cut(s)	11, 27, 337, 387, 824, 1025
BsiWI	CGTACG	3 cut(s)	36, 406, 891
BslFI	GGGAC	3 cut(s)	20, 72, 1078
BslI	CCNNNNNNNGG	4 cut(s)	95, 343, 421, 701
BsmAI	GTCTC	4 cut(s)	300, 512, 631, 788
BsmBI	CGTCTC	2 cut(s)	512, 788
BsmFI	GGGAC	3 cut(s)	20, 72, 1078
BsmI	GAATGC	1 cut(s)	592
BsnI	GGCC	7 cut(s)	30, 104, 110, 239, 436, 566, 878
BsoBI	CYCGRG	1 cut(s)	695
Bsp119I	TTCGAA	1 cut(s)	186
Bsp120I	GGGCCC	1 cut(s)	434
Bsp1286I	GDGCHC	5 cut(s)	123, 336, 438, 532, 702
Bsp13I	TCCGGA	1 cut(s)	336
Bsp143I	GATC	4 cut(s)	40, 63, 510, 992
Bsp19I	CCATGG	1 cut(s)	723
BspANI	GGCC	7 cut(s)	30, 104, 110, 239, 436, 566, 878
BspCNI	CTCAG	4 cut(s)	109, 310, 546, 1101
BspEI	TCCGGA	1 cut(s)	336
BspFNI	CGCG	9 cut(s)	137, 194, 242, 369, 422, 508, 657, 899, 956
BspLI	GGNNCC	8 cut(s)	8, 9, 164, 413, 436, 437, 565, 694
BspMAI	CTGCAG	1 cut(s)	453
BspMI	ACCTGC	2 cut(s)	442, 456
BspPI	GGATC	3 cut(s)	71, 518, 1000
BspT104I	TTCGAA	1 cut(s)	186
BspT107I	GGYRCC	2 cut(s)	162, 411
BsrDI	GCAATG	2 cut(s)	375, 879
BsrFI	RCCGGY	1 cut(s)	26
BsrI	ACTGG	1 cut(s)	645
BssAI	RCCGGY	1 cut(s)	26
BssECI	CCNNGG	7 cut(s)	18, 105, 192, 387, 415, 723, 1025
BssMI	GATC	4 cut(s)	40, 63, 510, 992
BssNI	GRCGYC	6 cut(s)	266, 321, 426, 720, 1016, 1091
BssT1I	CCWWGG	1 cut(s)	723
Bst2UI	CCWGG	2 cut(s)	107, 416
Bst4CI	ACNGT	5 cut(s)	19, 365, 411, 1069, 1165
Bst6I	CTCTTC	1 cut(s)	629
BstACI	GRCGYC	6 cut(s)	266, 321, 426, 720, 1016, 1091
BstBAI	YACGTR	2 cut(s)	84, 570
BstBI	TTCGAA	1 cut(s)	186
BstC8I	GCNNGC	3 cut(s)	170, 373, 681
BstDEI	CTNAG	4 cut(s)	117, 297, 554, 1109
BstDSI	CCRYGG	3 cut(s)	18, 192, 723
BstEII	GGTNACC	1 cut(s)	13
BstF5I	GGATG	5 cut(s)	123, 439, 694, 710, 1044
BstFNI	CGCG	9 cut(s)	137, 194, 242, 369, 422, 508, 657, 899, 956
BstHHI	GCGC	5 cut(s)	244, 371, 422, 899, 956
BstKTI	GATC	4 cut(s)	43, 66, 513, 995
BstMAI	GTCTC	4 cut(s)	300, 512, 631, 788
BstMBI	GATC	4 cut(s)	40, 63, 510, 992
BstMCI	CGRYCG	2 cut(s)	27, 43
BstMWI	GCNNNNNNNGC	6 cut(s)	248, 377, 728, 884, 896, 1013
BstNI	CCWGG	2 cut(s)	107, 416
BstPAI	GACNNNNGTC	1 cut(s)	656
BstPI	GGTNACC	1 cut(s)	13
BstSCI	CCNGG	5 cut(s)	9, 105, 386, 414, 1024
BstSFI	CTRYAG	1 cut(s)	449
BstSLI	GKGCMC	1 cut(s)	438
BstUI	CGCG	9 cut(s)	137, 194, 242, 369, 422, 508, 657, 899, 956
BstV1I	GCAGC	1 cut(s)	1108
BstV2I	GAAGAC	2 cut(s)	356, 656
BsuRI	GGCC	7 cut(s)	30, 104, 110, 239, 436, 566, 878
BtgI	CCRYGG	3 cut(s)	18, 192, 723
BtgZI	GCGATG	1 cut(s)	136
BtsCI	GGATG	5 cut(s)	123, 439, 694, 710, 1044
BtsI	GCAGTG	1 cut(s)	768
BtsIMutI	CAGTG	3 cut(s)	114, 768, 1026
BveI	ACCTGC	2 cut(s)	442, 456
Cac8I	GCNNGC	3 cut(s)	170, 373, 681
CaiI	CAGNNNCTG	1 cut(s)	106
CfoI	GCGC	5 cut(s)	244, 371, 422, 899, 956
Cfr10I	RCCGGY	1 cut(s)	26
Cfr13I	GGNCC	7 cut(s)	7, 103, 109, 434, 435, 564, 692
Cfr42I	CCGCGG	1 cut(s)	195
CseI	GACGC	8 cut(s)	255, 310, 365, 646, 728, 973, 1005, 1080
Csp6I	GTAC	6 cut(s)	37, 407, 412, 628, 892, 1179
CviAII	CATG	5 cut(s)	157, 514, 623, 724, 1172
CviQI	GTAC	6 cut(s)	37, 407, 412, 628, 892, 1179
DdeI	CTNAG	4 cut(s)	117, 297, 554, 1109
DpnI	GATC	4 cut(s)	42, 65, 512, 994
DpnII	GATC	4 cut(s)	40, 63, 510, 992
DraI	TTTAAA	1 cut(s)	712
DriI	GACNNNNNGTC	1 cut(s)	978
EaeI	YGGCCR	2 cut(s)	28, 876
Eam1104I	CTCTTC	1 cut(s)	629
Eam1105I	GACNNNNNGTC	1 cut(s)	978
EarI	CTCTTC	1 cut(s)	629
EciI	GGCGGA	3 cut(s)	882, 1022, 1096
Ecl136II	GAGCTC	3 cut(s)	121, 334, 530
Eco130I	CCWWGG	1 cut(s)	723
Eco24I	GRGCYC	4 cut(s)	123, 336, 438, 532
Eco47I	GGWCC	2 cut(s)	7, 692
Eco53kI	GAGCTC	3 cut(s)	121, 334, 530
Eco72I	CACGTG	2 cut(s)	84, 570
Eco88I	CYCGRG	1 cut(s)	695
Eco91I	GGTNACC	1 cut(s)	13
EcoICRI	GAGCTC	3 cut(s)	121, 334, 530
EcoO109I	RGGNCCY	3 cut(s)	7, 103, 435
EcoO65I	GGTNACC	1 cut(s)	13
EcoRII	CCWGG	2 cut(s)	105, 414
EcoT14I	CCWWGG	1 cut(s)	723
EcoT38I	GRGCYC	4 cut(s)	123, 336, 438, 532
ErhI	CCWWGG	1 cut(s)	723
Esp3I	CGTCTC	2 cut(s)	512, 788
FaeI	CATG	5 cut(s)	160, 517, 626, 727, 1175
FaiI	YATR	8 cut(s)	158, 305, 515, 624, 662, 725, 1045, 1173
FaqI	GGGAC	3 cut(s)	20, 72, 1078
FatI	CATG	5 cut(s)	156, 513, 622, 723, 1171
FauI	CCCGC	3 cut(s)	64, 739, 1117
FokI	GGATG	5 cut(s)	110, 426, 701, 717, 1051
FriOI	GRGCYC	4 cut(s)	123, 336, 438, 532
FspBI	CTAG	1 cut(s)	768
GlaI	GCGC	5 cut(s)	243, 370, 421, 898, 955
HaeIII	GGCC	7 cut(s)	30, 104, 110, 239, 436, 566, 878
HapII	CCGG	6 cut(s)	11, 27, 337, 387, 824, 1025
HgaI	GACGC	8 cut(s)	255, 310, 365, 646, 728, 973, 1005, 1080
HhaI	GCGC	5 cut(s)	244, 371, 422, 899, 956
Hin1I	GRCGYC	6 cut(s)	266, 321, 426, 720, 1016, 1091
Hin1II	CATG	5 cut(s)	160, 517, 626, 727, 1175
Hin6I	GCGC	5 cut(s)	242, 369, 420, 897, 954
HinP1I	GCGC	5 cut(s)	242, 369, 420, 897, 954
HincII	GTYRAC	2 cut(s)	217, 457
HindII	GTYRAC	2 cut(s)	217, 457
HindIII	AAGCTT	1 cut(s)	284
HinfI	GANTC	5 cut(s)	47, 340, 472, 1105, 1168
HpaI	GTTAAC	1 cut(s)	457
HpaII	CCGG	6 cut(s)	11, 27, 337, 387, 824, 1025
HphI	GGTGA	4 cut(s)	7, 982, 1081, 1177
Hpy166II	GTNNAC	3 cut(s)	217, 328, 457
Hpy188I	TCNGA	5 cut(s)	444, 937, 997, 1110, 1211
Hpy188III	TCNNGA	2 cut(s)	44, 337
Hpy8I	GTNNAC	3 cut(s)	217, 328, 457
Hpy99I	CGWCG	7 cut(s)	271, 326, 431, 472, 601, 967, 1096
HpyAV	CCTTC	4 cut(s)	574, 773, 923, 1078
HpyCH4III	ACNGT	5 cut(s)	19, 365, 411, 1069, 1165
HpyCH4IV	ACGT	4 cut(s)	35, 83, 426, 569
HpyCH4V	TGCA	4 cut(s)	375, 451, 622, 805
HpyF10VI	GCNNNNNNNGC	6 cut(s)	248, 377, 728, 884, 896, 1013
HpyF3I	CTNAG	4 cut(s)	117, 297, 554, 1109
HpySE526I	ACGT	4 cut(s)	35, 83, 426, 569
Hsp92I	GRCGYC	6 cut(s)	266, 321, 426, 720, 1016, 1091
Hsp92II	CATG	5 cut(s)	160, 517, 626, 727, 1175
HspAI	GCGC	5 cut(s)	242, 369, 420, 897, 954
KflI	GGGWCCC	1 cut(s)	7
Kpn2I	TCCGGA	1 cut(s)	336
KpnI	GGTACC	1 cut(s)	415
KspAI	GTTAAC	1 cut(s)	457
KspI	CCGCGG	1 cut(s)	195
Kzo9I	GATC	4 cut(s)	40, 63, 510, 992
LmnI	GCTCC	3 cut(s)	339, 527, 676
Lsp1109I	GCAGC	1 cut(s)	1108
LweI	GCATC	1 cut(s)	549
MaeI	CTAG	1 cut(s)	768
MaeII	ACGT	4 cut(s)	35, 83, 426, 569
MaeIII	GTNAC	4 cut(s)	13, 74, 463, 970
MalI	GATC	4 cut(s)	42, 65, 512, 994
MboI	GATC	4 cut(s)	40, 63, 510, 992
MboII	GAAGA	4 cut(s)	211, 361, 646, 661
MhlI	GDGCHC	5 cut(s)	123, 336, 438, 532, 702
MlsI	TGGCCA	1 cut(s)	878
MluCI	AATT	6 cut(s)	739, 849, 908, 975, 1010, 1049
MluI	ACGCGT	1 cut(s)	655
MluNI	TGGCCA	1 cut(s)	878
MlyI	GAGTC	2 cut(s)	56, 349
MmeI	TCCRAC	2 cut(s)	825, 915
Mox20I	TGGCCA	1 cut(s)	878
MroI	TCCGGA	1 cut(s)	336
MscI	TGGCCA	1 cut(s)	878
MseI	TTAA	4 cut(s)	225, 456, 534, 711
MslI	CAYNNNNRTG	2 cut(s)	155, 548
Msp20I	TGGCCA	1 cut(s)	878
MspA1I	CMGCKG	1 cut(s)	194
MspI	CCGG	6 cut(s)	11, 27, 337, 387, 824, 1025
MspR9I	CCNGG	5 cut(s)	11, 107, 388, 416, 1026
Mva1269I	GAATGC	1 cut(s)	592
MvaI	CCWGG	2 cut(s)	107, 416
MvnI	CGCG	9 cut(s)	137, 194, 242, 369, 422, 508, 657, 899, 956
MwoI	GCNNNNNNNGC	6 cut(s)	248, 377, 728, 884, 896, 1013
NciI	CCSGG	3 cut(s)	11, 388, 1026
NcoI	CCATGG	1 cut(s)	723
NdeII	GATC	4 cut(s)	40, 63, 510, 992
NlaIII	CATG	5 cut(s)	160, 517, 626, 727, 1175
NlaIV	GGNNCC	8 cut(s)	8, 9, 164, 413, 436, 437, 565, 694
NmuCI	GTSAC	4 cut(s)	13, 74, 463, 970
NspV	TTCGAA	1 cut(s)	186
PcsI	WCGNNNNNNNCGW	6 cut(s)	543, 566, 575, 941, 1073, 1190
PctI	GAATGC	1 cut(s)	592
PfeI	GAWTC	3 cut(s)	472, 1105, 1168
Pfl23II	CGTACG	3 cut(s)	36, 406, 891
PflFI	GACNNNGTC	2 cut(s)	11, 265
Ple19I	CGATCG	1 cut(s)	43
PleI	GAGTC	2 cut(s)	55, 348
PmaCI	CACGTG	2 cut(s)	84, 570
PmlI	CACGTG	2 cut(s)	84, 570
PpsI	GAGTC	2 cut(s)	55, 348
Ppu21I	YACGTR	2 cut(s)	84, 570
PpuMI	RGGWCCY	1 cut(s)	7
PshAI	GACNNNNGTC	1 cut(s)	656
Psp124BI	GAGCTC	3 cut(s)	123, 336, 532
Psp5II	RGGWCCY	1 cut(s)	7
Psp6I	CCWGG	2 cut(s)	105, 414
PspCI	CACGTG	2 cut(s)	84, 570
PspEI	GGTNACC	1 cut(s)	13
PspGI	CCWGG	2 cut(s)	105, 414
PspLI	CGTACG	3 cut(s)	36, 406, 891
PspN4I	GGNNCC	8 cut(s)	8, 9, 164, 413, 436, 437, 565, 694
PspOMI	GGGCCC	1 cut(s)	434
PspPI	GGNCC	7 cut(s)	7, 103, 109, 434, 435, 564, 692
PspPPI	RGGWCCY	1 cut(s)	7
PstI	CTGCAG	1 cut(s)	453
PstNI	CAGNNNCTG	1 cut(s)	106
PsyI	GACNNNGTC	2 cut(s)	11, 265
PvuI	CGATCG	1 cut(s)	43
RsaI	GTAC	6 cut(s)	38, 408, 413, 629, 893, 1180
RsaNI	GTAC	6 cut(s)	37, 407, 412, 628, 892, 1179
RseI	CAYNNNNRTG	2 cut(s)	155, 548
SacI	GAGCTC	3 cut(s)	123, 336, 532
SacII	CCGCGG	1 cut(s)	195
SaqAI	TTAA	4 cut(s)	225, 456, 534, 711
Sau3AI	GATC	4 cut(s)	40, 63, 510, 992
Sau96I	GGNCC	7 cut(s)	7, 103, 109, 434, 435, 564, 692
SbfI	CCTGCAGG	1 cut(s)	453
SchI	GAGTC	2 cut(s)	56, 349
ScrFI	CCNGG	5 cut(s)	11, 107, 388, 416, 1026
SdaI	CCTGCAGG	1 cut(s)	453
SduI	GDGCHC	5 cut(s)	123, 336, 438, 532, 702
SfaNI	GCATC	1 cut(s)	549
SfcI	CTRYAG	1 cut(s)	449
Sfr303I	CCGCGG	1 cut(s)	195
SfuI	TTCGAA	1 cut(s)	186
SgrBI	CCGCGG	1 cut(s)	195
SinI	GGWCC	2 cut(s)	7, 692
SmiMI	CAYNNNNRTG	2 cut(s)	155, 548
Sse8387I	CCTGCAGG	1 cut(s)	453
Sse9I	AATT	6 cut(s)	739, 849, 908, 975, 1010, 1049
SspMI	CTAG	1 cut(s)	768
SstI	GAGCTC	3 cut(s)	123, 336, 532
StyD4I	CCNGG	5 cut(s)	9, 105, 386, 414, 1024
StyI	CCWWGG	1 cut(s)	723
TaaI	ACNGT	5 cut(s)	19, 365, 411, 1069, 1165
TaiI	ACGT	4 cut(s)	38, 86, 429, 572
TaqI	TCGA	5 cut(s)	66, 186, 246, 546, 982
TasI	AATT	6 cut(s)	739, 849, 908, 975, 1010, 1049
TatI	WGTACW	1 cut(s)	1178
TfiI	GAWTC	3 cut(s)	472, 1105, 1168
Tru1I	TTAA	4 cut(s)	225, 456, 534, 711
Tru9I	TTAA	4 cut(s)	225, 456, 534, 711
TscAI	CASTG	3 cut(s)	121, 768, 1026
TseFI	GTSAC	4 cut(s)	13, 74, 463, 970
TseI	GCWGC	1 cut(s)	1121
Tsp45I	GTSAC	4 cut(s)	13, 74, 463, 970
TspGWI	ACGGA	4 cut(s)	368, 536, 540, 717
TspRI	CASTG	3 cut(s)	121, 768, 1026
Tth111I	GACNNNGTC	2 cut(s)	11, 265
VpaK11BI	GGWCC	2 cut(s)	7, 692
XapI	RAATTY	1 cut(s)	739
XspI	CTAG	1 cut(s)	768
ZraI	GACGTC	1 cut(s)	427

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.