Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G02820 |
| fragaria_vesca | FvH4_1g22710 FvH4_1g22710 FvH4_1g22710 FvH4_1g22710 FvH4_2g03881 FvH4_6g05151 |
| malus_domestica | MD04G1113900.v1.1 |
| prunus_persica | Prupe.6G243200_v2.0.a1 |
| pyrus_communis | pycom04g10130 |
| rosa_chinensis | RchiOBHm_Chr2g0103111 RchiOBHm_Chr2g0116961 RchiOBHm_Chr3g0453711 |
| rosa_laevigata | RLG00000018316 |
| rosa_multiflora | Rmu_sc0003556.1_g000009 Rmu_sc0011969.1_g000014 Rmu_ssc0000238.1_g000021 Rmu_ssc0000238.1_g000022 |
| rosa_roxburghii | Rroxscaffold_2G00126860 Rroxscaffold_6G00430630 |
| rosa_rugosa | Rorug02G0209000.1 |
| rosa_samantha | Rh2AG265100 Rh2BG276800 Rh2DG272500 Rh2DG291500 |
| rosa_wichuraiana | Rw2G020900 Rw3G004140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 149 |
| AccII | CGCG | 1 cut(s) | 327 |
| AciI | CCGC | 6 cut(s) | 5, 44, 132, 135, 147, 330 |
| AclWI | GGATC | 1 cut(s) | 923 |
| AcuI | CTGAAG | 2 cut(s) | 295, 816 |
| AdeI | CACNNNGTG | 1 cut(s) | 545 |
| AfaI | GTAC | 1 cut(s) | 909 |
| AflII | CTTAAG | 1 cut(s) | 896 |
| AflIII | ACRYGT | 1 cut(s) | 978 |
| AgeI | ACCGGT | 1 cut(s) | 813 |
| AgsI | TTSAA | 3 cut(s) | 61, 767, 943 |
| AjnI | CCWGG | 1 cut(s) | 528 |
| Alw21I | GWGCWC | 2 cut(s) | 360, 1217 |
| Alw26I | GTCTC | 4 cut(s) | 251, 571, 602, 654 |
| AlwI | GGATC | 1 cut(s) | 923 |
| Ama87I | CYCGRG | 1 cut(s) | 1148 |
| AoxI | GGCC | 2 cut(s) | 844, 1034 |
| ApeKI | GCWGC | 4 cut(s) | 611, 776, 1264, 1267 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 965, 997 |
| AsiGI | ACCGGT | 1 cut(s) | 813 |
| AspLEI | GCGC | 1 cut(s) | 329 |
| AspS9I | GGNCC | 1 cut(s) | 532 |
| AsuC2I | CCSGG | 4 cut(s) | 722, 1108, 1149, 1150 |
| AsuHPI | GGTGA | 3 cut(s) | 308, 427, 1189 |
| AvaI | CYCGRG | 1 cut(s) | 1148 |
| AvaII | GGWCC | 1 cut(s) | 532 |
| AxyI | CCTNAGG | 1 cut(s) | 473 |
| BanI | GGYRCC | 1 cut(s) | 149 |
| BanII | GRGCYC | 2 cut(s) | 360, 1217 |
| BbsI | GAAGAC | 1 cut(s) | 804 |
| Bbv12I | GWGCWC | 2 cut(s) | 360, 1217 |
| BbvI | GCAGC | 4 cut(s) | 623, 788, 1276, 1279 |
| BccI | CCATC | 4 cut(s) | 293, 440, 676, 1168 |
| BciT130I | CCWGG | 1 cut(s) | 530 |
| BciVI | GTATCC | 1 cut(s) | 455 |
| BcnI | CCSGG | 4 cut(s) | 722, 1108, 1149, 1150 |
| BcoDI | GTCTC | 4 cut(s) | 251, 571, 602, 654 |
| BfaI | CTAG | 2 cut(s) | 182, 1121 |
| BfmI | CTRYAG | 1 cut(s) | 1262 |
| BfrI | CTTAAG | 1 cut(s) | 896 |
| BfuI | GTATCC | 1 cut(s) | 455 |
| BglII | AGATCT | 2 cut(s) | 223, 945 |
| BisI | GCNGC | 7 cut(s) | 132, 135, 330, 612, 777, 1265, 1268 |
| BlsI | GCNGC | 7 cut(s) | 133, 136, 331, 613, 778, 1266, 1269 |
| Bme1390I | CCNGG | 5 cut(s) | 530, 722, 1108, 1149, 1150 |
| Bme18I | GGWCC | 1 cut(s) | 532 |
| BmeT110I | CYCGRG | 1 cut(s) | 1148 |
| BmgT120I | GGNCC | 1 cut(s) | 532 |
| BmiI | GGNNCC | 3 cut(s) | 142, 151, 818 |
| BmrFI | CCNGG | 5 cut(s) | 530, 722, 1108, 1149, 1150 |
| BmsI | GCATC | 3 cut(s) | 538, 733, 763 |
| BpiI | GAAGAC | 1 cut(s) | 804 |
| Bpu10I | CCTNAGC | 1 cut(s) | 354 |
| BpuEI | CTTGAG | 1 cut(s) | 895 |
| BpuMI | CCSGG | 4 cut(s) | 722, 1108, 1149, 1150 |
| BsaBI | GATNNNNATC | 1 cut(s) | 927 |
| BsaJI | CCNNGG | 2 cut(s) | 915, 1148 |
| BsaWI | WCCGGW | 2 cut(s) | 813, 904 |
| Bse118I | RCCGGY | 3 cut(s) | 143, 293, 813 |
| Bse1I | ACTGG | 1 cut(s) | 1228 |
| Bse21I | CCTNAGG | 1 cut(s) | 473 |
| Bse3DI | GCAATG | 1 cut(s) | 606 |
| Bse8I | GATNNNNATC | 1 cut(s) | 927 |
| BseBI | CCWGG | 1 cut(s) | 530 |
| BseDI | CCNNGG | 2 cut(s) | 915, 1148 |
| BseGI | GGATG | 2 cut(s) | 565, 968 |
| BseJI | GATNNNNATC | 1 cut(s) | 927 |
| BseMI | GCAATG | 1 cut(s) | 606 |
| BseMII | CTCAG | 4 cut(s) | 345, 487, 1080, 1188 |
| BseNI | ACTGG | 1 cut(s) | 1228 |
| BseRI | GAGGAG | 4 cut(s) | 145, 148, 226, 1139 |
| BseXI | GCAGC | 4 cut(s) | 623, 788, 1276, 1279 |
| BsgI | GTGCAG | 1 cut(s) | 263 |
| Bsh1236I | CGCG | 1 cut(s) | 327 |
| Bsh1285I | CGRYCG | 1 cut(s) | 364 |
| BshFI | GGCC | 2 cut(s) | 846, 1036 |
| BshNI | GGYRCC | 1 cut(s) | 149 |
| BshTI | ACCGGT | 1 cut(s) | 813 |
| BsiEI | CGRYCG | 1 cut(s) | 364 |
| BsiHKAI | GWGCWC | 2 cut(s) | 360, 1217 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1148 |
| BsiSI | CCGG | 8 cut(s) | 138, 144, 294, 721, 814, 905, 1107, 1149 |
| BsmAI | GTCTC | 4 cut(s) | 251, 571, 602, 654 |
| BsmI | GAATGC | 1 cut(s) | 66 |
| BsnI | GGCC | 2 cut(s) | 846, 1036 |
| BsoBI | CYCGRG | 1 cut(s) | 1148 |
| Bsp1286I | GDGCHC | 2 cut(s) | 360, 1217 |
| Bsp143I | GATC | 6 cut(s) | 26, 223, 273, 499, 928, 945 |
| BspACI | CCGC | 6 cut(s) | 5, 44, 132, 135, 147, 330 |
| BspANI | GGCC | 2 cut(s) | 846, 1036 |
| BspCNI | CTCAG | 4 cut(s) | 346, 486, 1081, 1189 |
| BspFNI | CGCG | 1 cut(s) | 327 |
| BspLI | GGNNCC | 3 cut(s) | 142, 151, 818 |
| BspMAI | CTGCAG | 1 cut(s) | 1266 |
| BspPI | GGATC | 1 cut(s) | 923 |
| BspQI | GCTCTTC | 1 cut(s) | 875 |
| BspT107I | GGYRCC | 1 cut(s) | 149 |
| BspTI | CTTAAG | 1 cut(s) | 896 |
| BsrDI | GCAATG | 1 cut(s) | 606 |
| BsrFI | RCCGGY | 3 cut(s) | 143, 293, 813 |
| BsrI | ACTGG | 1 cut(s) | 1228 |
| BssAI | RCCGGY | 3 cut(s) | 143, 293, 813 |
| BssECI | CCNNGG | 2 cut(s) | 915, 1148 |
| BssMI | GATC | 6 cut(s) | 26, 223, 273, 499, 928, 945 |
| BssT1I | CCWWGG | 1 cut(s) | 915 |
| Bst2UI | CCWGG | 1 cut(s) | 530 |
| Bst4CI | ACNGT | 3 cut(s) | 262, 365, 1071 |
| Bst6I | CTCTTC | 4 cut(s) | 124, 166, 509, 875 |
| BstAFI | CTTAAG | 1 cut(s) | 896 |
| BstC8I | GCNNGC | 2 cut(s) | 145, 848 |
| BstDEI | CTNAG | 6 cut(s) | 354, 473, 492, 760, 1089, 1197 |
| BstF5I | GGATG | 2 cut(s) | 565, 968 |
| BstFNI | CGCG | 1 cut(s) | 327 |
| BstHHI | GCGC | 1 cut(s) | 329 |
| BstKTI | GATC | 6 cut(s) | 29, 226, 276, 502, 931, 948 |
| BstMAI | GTCTC | 4 cut(s) | 251, 571, 602, 654 |
| BstMBI | GATC | 6 cut(s) | 26, 223, 273, 499, 928, 945 |
| BstMCI | CGRYCG | 1 cut(s) | 364 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 140, 149, 1276 |
| BstNI | CCWGG | 1 cut(s) | 530 |
| BstNSI | RCATGY | 1 cut(s) | 982 |
| BstSCI | CCNGG | 5 cut(s) | 528, 720, 1106, 1147, 1148 |
| BstSFI | CTRYAG | 1 cut(s) | 1262 |
| BstUI | CGCG | 1 cut(s) | 327 |
| BstV1I | GCAGC | 4 cut(s) | 623, 788, 1276, 1279 |
| BstV2I | GAAGAC | 1 cut(s) | 804 |
| BstX2I | RGATCY | 2 cut(s) | 223, 945 |
| BstYI | RGATCY | 2 cut(s) | 223, 945 |
| Bsu36I | CCTNAGG | 1 cut(s) | 473 |
| BsuI | GTATCC | 1 cut(s) | 455 |
| BsuRI | GGCC | 2 cut(s) | 846, 1036 |
| BtsCI | GGATG | 2 cut(s) | 565, 968 |
| BtsIMutI | CAGTG | 3 cut(s) | 319, 655, 1076 |
| Cac8I | GCNNGC | 2 cut(s) | 145, 848 |
| CfoI | GCGC | 1 cut(s) | 329 |
| Cfr10I | RCCGGY | 3 cut(s) | 143, 293, 813 |
| Cfr13I | GGNCC | 1 cut(s) | 532 |
| Cfr9I | CCCGGG | 1 cut(s) | 1148 |
| Csp6I | GTAC | 1 cut(s) | 908 |
| CspAI | ACCGGT | 1 cut(s) | 813 |
| CviAII | CATG | 3 cut(s) | 570, 664, 979 |
| CviQI | GTAC | 1 cut(s) | 908 |
| DdeI | CTNAG | 6 cut(s) | 354, 473, 492, 760, 1089, 1197 |
| DpnI | GATC | 6 cut(s) | 28, 225, 275, 501, 930, 947 |
| DpnII | GATC | 6 cut(s) | 26, 223, 273, 499, 928, 945 |
| DraIII | CACNNNGTG | 1 cut(s) | 545 |
| Eam1104I | CTCTTC | 4 cut(s) | 124, 166, 509, 875 |
| EarI | CTCTTC | 4 cut(s) | 124, 166, 509, 875 |
| EciI | GGCGGA | 2 cut(s) | 20, 59 |
| Ecl136II | GAGCTC | 2 cut(s) | 358, 1215 |
| Eco130I | CCWWGG | 1 cut(s) | 915 |
| Eco24I | GRGCYC | 2 cut(s) | 360, 1217 |
| Eco47I | GGWCC | 1 cut(s) | 532 |
| Eco53kI | GAGCTC | 2 cut(s) | 358, 1215 |
| Eco57I | CTGAAG | 2 cut(s) | 295, 816 |
| Eco81I | CCTNAGG | 1 cut(s) | 473 |
| Eco88I | CYCGRG | 1 cut(s) | 1148 |
| EcoICRI | GAGCTC | 2 cut(s) | 358, 1215 |
| EcoRII | CCWGG | 1 cut(s) | 528 |
| EcoT14I | CCWWGG | 1 cut(s) | 915 |
| EcoT38I | GRGCYC | 2 cut(s) | 360, 1217 |
| ErhI | CCWWGG | 1 cut(s) | 915 |
| FaeI | CATG | 3 cut(s) | 573, 667, 982 |
| FatI | CATG | 3 cut(s) | 569, 663, 978 |
| FauNDI | CATATG | 1 cut(s) | 985 |
| Fnu4HI | GCNGC | 7 cut(s) | 132, 135, 330, 612, 777, 1265, 1268 |
| FokI | GGATG | 2 cut(s) | 572, 975 |
| FriOI | GRGCYC | 2 cut(s) | 360, 1217 |
| Fsp4HI | GCNGC | 7 cut(s) | 132, 135, 330, 612, 777, 1265, 1268 |
| FspBI | CTAG | 2 cut(s) | 182, 1121 |
| GlaI | GCGC | 1 cut(s) | 328 |
| GluI | GCNGC | 7 cut(s) | 132, 135, 330, 612, 777, 1265, 1268 |
| HaeIII | GGCC | 2 cut(s) | 846, 1036 |
| HapII | CCGG | 8 cut(s) | 138, 144, 294, 721, 814, 905, 1107, 1149 |
| HhaI | GCGC | 1 cut(s) | 329 |
| Hin1II | CATG | 3 cut(s) | 573, 667, 982 |
| Hin6I | GCGC | 1 cut(s) | 327 |
| HinP1I | GCGC | 1 cut(s) | 327 |
| HindIII | AAGCTT | 2 cut(s) | 521, 899 |
| HinfI | GANTC | 4 cut(s) | 74, 337, 804, 1201 |
| HpaII | CCGG | 8 cut(s) | 138, 144, 294, 721, 814, 905, 1107, 1149 |
| HphI | GGTGA | 3 cut(s) | 308, 427, 1189 |
| Hpy166II | GTNNAC | 1 cut(s) | 1246 |
| Hpy188I | TCNGA | 3 cut(s) | 79, 1240, 1283 |
| Hpy188III | TCNNGA | 9 cut(s) | 71, 212, 271, 353, 421, 475, 832, 874, 1135 |
| Hpy8I | GTNNAC | 1 cut(s) | 1246 |
| Hpy99I | CGWCG | 2 cut(s) | 86, 518 |
| HpyAV | CCTTC | 4 cut(s) | 319, 330, 630, 1105 |
| HpyCH4III | ACNGT | 3 cut(s) | 262, 365, 1071 |
| HpyCH4IV | ACGT | 3 cut(s) | 84, 486, 516 |
| HpyCH4V | TGCA | 9 cut(s) | 244, 585, 611, 675, 736, 776, 839, 995, 1264 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 140, 149, 1276 |
| HpyF3I | CTNAG | 6 cut(s) | 354, 473, 492, 760, 1089, 1197 |
| HpySE526I | ACGT | 3 cut(s) | 84, 486, 516 |
| Hsp92II | CATG | 3 cut(s) | 573, 667, 982 |
| HspAI | GCGC | 1 cut(s) | 327 |
| KroI | GCCGGC | 1 cut(s) | 143 |
| KroNI | GCCGGC | 1 cut(s) | 145 |
| Kzo9I | GATC | 6 cut(s) | 26, 223, 273, 499, 928, 945 |
| LguI | GCTCTTC | 1 cut(s) | 875 |
| LmnI | GCTCC | 3 cut(s) | 94, 140, 892 |
| Lsp1109I | GCAGC | 4 cut(s) | 623, 788, 1276, 1279 |
| LweI | GCATC | 3 cut(s) | 538, 733, 763 |
| MaeI | CTAG | 2 cut(s) | 182, 1121 |
| MaeII | ACGT | 3 cut(s) | 84, 486, 516 |
| MaeIII | GTNAC | 3 cut(s) | 487, 650, 832 |
| MalI | GATC | 6 cut(s) | 28, 225, 275, 501, 930, 947 |
| MboI | GATC | 6 cut(s) | 26, 223, 273, 499, 928, 945 |
| MflI | RGATCY | 2 cut(s) | 223, 945 |
| MhlI | GDGCHC | 2 cut(s) | 360, 1217 |
| MluCI | AATT | 1 cut(s) | 1029 |
| MmeI | TCCRAC | 2 cut(s) | 537, 706 |
| MroNI | GCCGGC | 1 cut(s) | 143 |
| MseI | TTAA | 5 cut(s) | 519, 897, 1017, 1101, 1167 |
| MslI | CAYNNNNRTG | 1 cut(s) | 680 |
| MspA1I | CMGCKG | 1 cut(s) | 343 |
| MspCI | CTTAAG | 1 cut(s) | 896 |
| MspI | CCGG | 8 cut(s) | 138, 144, 294, 721, 814, 905, 1107, 1149 |
| MspR9I | CCNGG | 5 cut(s) | 530, 722, 1108, 1149, 1150 |
| Mva1269I | GAATGC | 1 cut(s) | 66 |
| MvaI | CCWGG | 1 cut(s) | 530 |
| MvnI | CGCG | 1 cut(s) | 327 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 140, 149, 1276 |
| NaeI | GCCGGC | 1 cut(s) | 145 |
| NciI | CCSGG | 4 cut(s) | 722, 1108, 1149, 1150 |
| NdeI | CATATG | 1 cut(s) | 985 |
| NdeII | GATC | 6 cut(s) | 26, 223, 273, 499, 928, 945 |
| NgoMIV | GCCGGC | 1 cut(s) | 143 |
| NlaIII | CATG | 3 cut(s) | 573, 667, 982 |
| NlaIV | GGNNCC | 3 cut(s) | 142, 151, 818 |
| NmeAIII | GCCGAG | 1 cut(s) | 1062 |
| NmuCI | GTSAC | 2 cut(s) | 650, 832 |
| NspI | RCATGY | 1 cut(s) | 982 |
| PciI | ACATGT | 1 cut(s) | 978 |
| PciSI | GCTCTTC | 1 cut(s) | 875 |
| PctI | GAATGC | 1 cut(s) | 66 |
| PdiI | GCCGGC | 1 cut(s) | 145 |
| PfeI | GAWTC | 4 cut(s) | 74, 337, 804, 1201 |
| PfoI | TCCNGGA | 1 cut(s) | 528 |
| PinAI | ACCGGT | 1 cut(s) | 813 |
| PkrI | GCNGC | 7 cut(s) | 133, 136, 331, 613, 778, 1266, 1269 |
| PscI | ACATGT | 1 cut(s) | 978 |
| Psp124BI | GAGCTC | 2 cut(s) | 360, 1217 |
| Psp6I | CCWGG | 1 cut(s) | 528 |
| PspGI | CCWGG | 1 cut(s) | 528 |
| PspN4I | GGNNCC | 3 cut(s) | 142, 151, 818 |
| PspPI | GGNCC | 1 cut(s) | 532 |
| PstI | CTGCAG | 1 cut(s) | 1266 |
| PsuI | RGATCY | 2 cut(s) | 223, 945 |
| PvuII | CAGCTG | 1 cut(s) | 343 |
| RsaI | GTAC | 1 cut(s) | 909 |
| RsaNI | GTAC | 1 cut(s) | 908 |
| RseI | CAYNNNNRTG | 1 cut(s) | 680 |
| SacI | GAGCTC | 2 cut(s) | 360, 1217 |
| SapI | GCTCTTC | 1 cut(s) | 875 |
| SaqAI | TTAA | 5 cut(s) | 519, 897, 1017, 1101, 1167 |
| SatI | GCNGC | 7 cut(s) | 132, 135, 330, 612, 777, 1265, 1268 |
| Sau3AI | GATC | 6 cut(s) | 26, 223, 273, 499, 928, 945 |
| Sau96I | GGNCC | 1 cut(s) | 532 |
| ScrFI | CCNGG | 5 cut(s) | 530, 722, 1108, 1149, 1150 |
| SduI | GDGCHC | 2 cut(s) | 360, 1217 |
| SfaNI | GCATC | 3 cut(s) | 538, 733, 763 |
| SfcI | CTRYAG | 1 cut(s) | 1262 |
| SgrAI | CRCCGGYG | 1 cut(s) | 293 |
| SinI | GGWCC | 1 cut(s) | 532 |
| SmaI | CCCGGG | 1 cut(s) | 1150 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 680 |
| SmlI | CTYRAG | 2 cut(s) | 874, 896 |
| SmoI | CTYRAG | 2 cut(s) | 874, 896 |
| Sse9I | AATT | 1 cut(s) | 1029 |
| SsiI | CCGC | 6 cut(s) | 5, 44, 132, 135, 147, 330 |
| SspMI | CTAG | 2 cut(s) | 182, 1121 |
| SstI | GAGCTC | 2 cut(s) | 360, 1217 |
| StyD4I | CCNGG | 5 cut(s) | 528, 720, 1106, 1147, 1148 |
| StyI | CCWWGG | 1 cut(s) | 915 |
| TaaI | ACNGT | 3 cut(s) | 262, 365, 1071 |
| TaiI | ACGT | 3 cut(s) | 87, 489, 519 |
| TaqI | TCGA | 5 cut(s) | 167, 335, 360, 971, 1158 |
| TasI | AATT | 1 cut(s) | 1029 |
| TauI | GCSGC | 3 cut(s) | 134, 137, 332 |
| TfiI | GAWTC | 4 cut(s) | 74, 337, 804, 1201 |
| Tru1I | TTAA | 5 cut(s) | 519, 897, 1017, 1101, 1167 |
| Tru9I | TTAA | 5 cut(s) | 519, 897, 1017, 1101, 1167 |
| TscAI | CASTG | 3 cut(s) | 319, 655, 1076 |
| TseFI | GTSAC | 2 cut(s) | 650, 832 |
| TseI | GCWGC | 4 cut(s) | 611, 776, 1264, 1267 |
| Tsp45I | GTSAC | 2 cut(s) | 650, 832 |
| TspDTI | ATGAA | 3 cut(s) | 153, 742, 899 |
| TspGWI | ACGGA | 5 cut(s) | 107, 229, 383, 397, 951 |
| TspMI | CCCGGG | 1 cut(s) | 1148 |
| TspRI | CASTG | 3 cut(s) | 319, 655, 1076 |
| Vha464I | CTTAAG | 1 cut(s) | 896 |
| VpaK11BI | GGWCC | 1 cut(s) | 532 |
| XceI | RCATGY | 1 cut(s) | 982 |
| XmaI | CCCGGG | 1 cut(s) | 1148 |
| XspI | CTAG | 2 cut(s) | 182, 1121 |