Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G02820 |
| fragaria_vesca | FvH4_1g22710 FvH4_1g22710 FvH4_1g22710 FvH4_1g22710 FvH4_2g03881 FvH4_6g05151 |
| malus_domestica | MD04G1113900.v1.1 |
| prunus_persica | Prupe.6G243200_v2.0.a1 |
| pyrus_communis | pycom04g10130 |
| rosa_chinensis | RchiOBHm_Chr2g0103111 RchiOBHm_Chr2g0116961 RchiOBHm_Chr3g0453711 |
| rosa_laevigata | RLG00000018316 |
| rosa_multiflora | Rmu_sc0003556.1_g000009 Rmu_sc0011969.1_g000014 Rmu_ssc0000238.1_g000021 Rmu_ssc0000238.1_g000022 |
| rosa_roxburghii | Rroxscaffold_2G00126860 Rroxscaffold_6G00430630 |
| rosa_rugosa | Rorug02G0209000.1 |
| rosa_samantha | Rh2AG265100 Rh2BG276800 Rh2DG272500 Rh2DG291500 |
| rosa_wichuraiana | Rw2G020900 Rw3G004140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 554 |
| Acc36I | ACCTGC | 1 cut(s) | 277 |
| AccB1I | GGYRCC | 1 cut(s) | 722 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1330 |
| AccI | GTMKAC | 1 cut(s) | 1257 |
| AccII | CGCG | 1 cut(s) | 275 |
| AciI | CCGC | 6 cut(s) | 232, 235, 275, 765, 930, 1053 |
| AclWI | GGATC | 1 cut(s) | 285 |
| AcsI | RAATTY | 3 cut(s) | 405, 891, 1319 |
| AcuI | CTGAAG | 1 cut(s) | 1110 |
| AfaI | GTAC | 4 cut(s) | 272, 319, 377, 1073 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1330 |
| AflII | CTTAAG | 2 cut(s) | 961, 1087 |
| AgsI | TTSAA | 7 cut(s) | 193, 386, 419, 442, 854, 872, 1181 |
| AjnI | CCWGG | 1 cut(s) | 485 |
| AluBI | AGCT | 6 cut(s) | 104, 154, 240, 343, 666, 832 |
| AluI | AGCT | 6 cut(s) | 104, 154, 240, 343, 666, 832 |
| Alw21I | GWGCWC | 1 cut(s) | 834 |
| Alw26I | GTCTC | 4 cut(s) | 183, 582, 1002, 1157 |
| AlwI | GGATC | 1 cut(s) | 285 |
| Ama87I | CYCGRG | 3 cut(s) | 56, 111, 803 |
| AoxI | GGCC | 1 cut(s) | 445 |
| ApeKI | GCWGC | 2 cut(s) | 237, 973 |
| ApoI | RAATTY | 3 cut(s) | 405, 891, 1319 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 891 |
| AspLEI | GCGC | 1 cut(s) | 63 |
| AspS9I | GGNCC | 2 cut(s) | 116, 210 |
| AsuC2I | CCSGG | 1 cut(s) | 1021 |
| AsuHPI | GGTGA | 2 cut(s) | 716, 913 |
| AvaI | CYCGRG | 3 cut(s) | 56, 111, 803 |
| AvaII | GGWCC | 2 cut(s) | 116, 210 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 359, 392 |
| BanI | GGYRCC | 1 cut(s) | 722 |
| BanII | GRGCYC | 1 cut(s) | 834 |
| BauI | CACGAG | 1 cut(s) | 783 |
| BbsI | GAAGAC | 2 cut(s) | 506, 552 |
| Bbv12I | GWGCWC | 1 cut(s) | 834 |
| BbvI | GCAGC | 2 cut(s) | 249, 985 |
| BccI | CCATC | 1 cut(s) | 499 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 37, 71 |
| BciT130I | CCWGG | 1 cut(s) | 487 |
| BcnI | CCSGG | 1 cut(s) | 1021 |
| BcoDI | GTCTC | 4 cut(s) | 183, 582, 1002, 1157 |
| BfrI | CTTAAG | 2 cut(s) | 961, 1087 |
| BfuAI | ACCTGC | 1 cut(s) | 277 |
| BisI | GCNGC | 3 cut(s) | 235, 238, 974 |
| BlsI | GCNGC | 3 cut(s) | 236, 239, 975 |
| Bme1390I | CCNGG | 2 cut(s) | 487, 1021 |
| Bme18I | GGWCC | 2 cut(s) | 116, 210 |
| BmeT110I | CYCGRG | 3 cut(s) | 56, 111, 803 |
| BmgT120I | GGNCC | 2 cut(s) | 116, 210 |
| BmiI | GGNNCC | 2 cut(s) | 118, 724 |
| BmrFI | CCNGG | 2 cut(s) | 487, 1021 |
| BmsI | GCATC | 4 cut(s) | 72, 689, 917, 960 |
| BpiI | GAAGAC | 2 cut(s) | 506, 552 |
| BpuMI | CCSGG | 1 cut(s) | 1021 |
| BsaI | GGTCTC | 1 cut(s) | 1002 |
| BsaJI | CCNNGG | 3 cut(s) | 112, 1003, 1020 |
| BsaWI | WCCGGW | 1 cut(s) | 923 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1330 |
| Bse1I | ACTGG | 1 cut(s) | 992 |
| BseBI | CCWGG | 1 cut(s) | 487 |
| BseDI | CCNNGG | 3 cut(s) | 112, 1003, 1020 |
| BseGI | GGATG | 5 cut(s) | 16, 136, 510, 932, 1165 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1330 |
| BseMII | CTCAG | 1 cut(s) | 1290 |
| BseNI | ACTGG | 1 cut(s) | 992 |
| BseRI | GAGGAG | 1 cut(s) | 1244 |
| BseXI | GCAGC | 2 cut(s) | 249, 985 |
| BseYI | CCCAGC | 1 cut(s) | 119 |
| Bsh1236I | CGCG | 1 cut(s) | 275 |
| BshFI | GGCC | 1 cut(s) | 447 |
| BshNI | GGYRCC | 1 cut(s) | 722 |
| BsiHKAI | GWGCWC | 1 cut(s) | 834 |
| BsiHKCI | CYCGRG | 3 cut(s) | 56, 111, 803 |
| BsiSI | CCGG | 2 cut(s) | 924, 1020 |
| BsiWI | CGTACG | 1 cut(s) | 1071 |
| BslFI | GGGAC | 3 cut(s) | 102, 381, 674 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1330 |
| BsmAI | GTCTC | 4 cut(s) | 183, 582, 1002, 1157 |
| BsmBI | CGTCTC | 1 cut(s) | 1157 |
| BsmFI | GGGAC | 3 cut(s) | 102, 381, 674 |
| BsmI | GAATGC | 2 cut(s) | 434, 939 |
| BsnI | GGCC | 1 cut(s) | 447 |
| Bso31I | GGTCTC | 1 cut(s) | 1002 |
| BsoBI | CYCGRG | 3 cut(s) | 56, 111, 803 |
| Bsp1286I | GDGCHC | 1 cut(s) | 834 |
| Bsp1407I | TGTACA | 1 cut(s) | 317 |
| Bsp143I | GATC | 1 cut(s) | 277 |
| BspACI | CCGC | 6 cut(s) | 232, 235, 275, 765, 930, 1053 |
| BspANI | GGCC | 1 cut(s) | 447 |
| BspCNI | CTCAG | 1 cut(s) | 1291 |
| BspFNI | CGCG | 1 cut(s) | 275 |
| BspHI | TCATGA | 1 cut(s) | 1188 |
| BspLI | GGNNCC | 2 cut(s) | 118, 724 |
| BspMI | ACCTGC | 1 cut(s) | 277 |
| BspPI | GGATC | 1 cut(s) | 285 |
| BspQI | GCTCTTC | 1 cut(s) | 822 |
| BspT107I | GGYRCC | 1 cut(s) | 722 |
| BspTI | CTTAAG | 2 cut(s) | 961, 1087 |
| BspTNI | GGTCTC | 1 cut(s) | 1002 |
| BsrGI | TGTACA | 1 cut(s) | 317 |
| BsrI | ACTGG | 1 cut(s) | 992 |
| BssECI | CCNNGG | 3 cut(s) | 112, 1003, 1020 |
| BssMI | GATC | 1 cut(s) | 277 |
| BssSI | CACGAG | 1 cut(s) | 783 |
| BssT1I | CCWWGG | 1 cut(s) | 1003 |
| Bst2BI | CACGAG | 1 cut(s) | 783 |
| Bst2UI | CCWGG | 1 cut(s) | 487 |
| Bst4CI | ACNGT | 5 cut(s) | 70, 189, 380, 556, 1168 |
| Bst6I | CTCTTC | 3 cut(s) | 192, 414, 822 |
| BstAFI | CTTAAG | 2 cut(s) | 961, 1087 |
| BstAUI | TGTACA | 1 cut(s) | 317 |
| BstDEI | CTNAG | 2 cut(s) | 303, 1299 |
| BstF5I | GGATG | 5 cut(s) | 16, 136, 510, 932, 1165 |
| BstFNI | CGCG | 1 cut(s) | 275 |
| BstHHI | GCGC | 1 cut(s) | 63 |
| BstKTI | GATC | 1 cut(s) | 280 |
| BstMAI | GTCTC | 4 cut(s) | 183, 582, 1002, 1157 |
| BstMBI | GATC | 1 cut(s) | 277 |
| BstNI | CCWGG | 1 cut(s) | 487 |
| BstNSI | RCATGY | 1 cut(s) | 374 |
| BstSCI | CCNGG | 2 cut(s) | 485, 1019 |
| BstUI | CGCG | 1 cut(s) | 275 |
| BstV1I | GCAGC | 2 cut(s) | 249, 985 |
| BstV2I | GAAGAC | 2 cut(s) | 506, 552 |
| BstX2I | RGATCY | 1 cut(s) | 277 |
| BstYI | RGATCY | 1 cut(s) | 277 |
| BsuRI | GGCC | 1 cut(s) | 447 |
| BtsCI | GGATG | 5 cut(s) | 16, 136, 510, 932, 1165 |
| BtsIMutI | CAGTG | 1 cut(s) | 66 |
| BveI | ACCTGC | 1 cut(s) | 277 |
| CciI | TCATGA | 1 cut(s) | 1188 |
| CfoI | GCGC | 1 cut(s) | 63 |
| Cfr13I | GGNCC | 2 cut(s) | 116, 210 |
| CseI | GACGC | 1 cut(s) | 112 |
| Csp6I | GTAC | 4 cut(s) | 271, 318, 376, 1072 |
| CviAII | CATG | 6 cut(s) | 298, 371, 550, 1142, 1189, 1336 |
| CviQI | GTAC | 4 cut(s) | 271, 318, 376, 1072 |
| DdeI | CTNAG | 2 cut(s) | 303, 1299 |
| DpnI | GATC | 1 cut(s) | 279 |
| DpnII | GATC | 1 cut(s) | 277 |
| DraI | TTTAAA | 1 cut(s) | 718 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 554 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 554 |
| Eam1104I | CTCTTC | 3 cut(s) | 192, 414, 822 |
| EarI | CTCTTC | 3 cut(s) | 192, 414, 822 |
| EciI | GGCGGA | 1 cut(s) | 780 |
| Ecl136II | GAGCTC | 1 cut(s) | 832 |
| Eco130I | CCWWGG | 1 cut(s) | 1003 |
| Eco24I | GRGCYC | 1 cut(s) | 834 |
| Eco31I | GGTCTC | 1 cut(s) | 1002 |
| Eco47I | GGWCC | 2 cut(s) | 116, 210 |
| Eco53kI | GAGCTC | 1 cut(s) | 832 |
| Eco57I | CTGAAG | 1 cut(s) | 1110 |
| Eco88I | CYCGRG | 3 cut(s) | 56, 111, 803 |
| EcoICRI | GAGCTC | 1 cut(s) | 832 |
| EcoO109I | RGGNCCY | 1 cut(s) | 116 |
| EcoRII | CCWGG | 1 cut(s) | 485 |
| EcoT14I | CCWWGG | 1 cut(s) | 1003 |
| EcoT22I | ATGCAT | 1 cut(s) | 583 |
| EcoT38I | GRGCYC | 1 cut(s) | 834 |
| ErhI | CCWWGG | 1 cut(s) | 1003 |
| Esp3I | CGTCTC | 1 cut(s) | 1157 |
| FaeI | CATG | 6 cut(s) | 301, 374, 553, 1145, 1192, 1339 |
| FaqI | GGGAC | 3 cut(s) | 102, 381, 674 |
| FatI | CATG | 6 cut(s) | 297, 370, 549, 1141, 1188, 1335 |
| FauI | CCCGC | 2 cut(s) | 239, 1046 |
| FauNDI | CATATG | 1 cut(s) | 635 |
| FblI | GTMKAC | 1 cut(s) | 1257 |
| Fnu4HI | GCNGC | 3 cut(s) | 235, 238, 974 |
| FokI | GGATG | 5 cut(s) | 23, 143, 517, 939, 1172 |
| FriOI | GRGCYC | 1 cut(s) | 834 |
| Fsp4HI | GCNGC | 3 cut(s) | 235, 238, 974 |
| GlaI | GCGC | 1 cut(s) | 62 |
| GluI | GCNGC | 3 cut(s) | 235, 238, 974 |
| GsaI | CCCAGC | 1 cut(s) | 123 |
| HaeIII | GGCC | 1 cut(s) | 447 |
| HapII | CCGG | 2 cut(s) | 924, 1020 |
| HgaI | GACGC | 1 cut(s) | 112 |
| HhaI | GCGC | 1 cut(s) | 63 |
| Hin1II | CATG | 6 cut(s) | 301, 374, 553, 1145, 1192, 1339 |
| Hin6I | GCGC | 1 cut(s) | 61 |
| HinP1I | GCGC | 1 cut(s) | 61 |
| HincII | GTYRAC | 3 cut(s) | 559, 616, 1258 |
| HindII | GTYRAC | 3 cut(s) | 559, 616, 1258 |
| HindIII | AAGCTT | 1 cut(s) | 102 |
| HinfI | GANTC | 5 cut(s) | 903, 955, 1076, 1120, 1343 |
| HpaII | CCGG | 2 cut(s) | 924, 1020 |
| HphI | GGTGA | 2 cut(s) | 716, 913 |
| Hpy166II | GTNNAC | 3 cut(s) | 559, 616, 1258 |
| Hpy188I | TCNGA | 5 cut(s) | 352, 525, 954, 1129, 1218 |
| Hpy188III | TCNNGA | 4 cut(s) | 158, 785, 1189, 1207 |
| Hpy8I | GTNNAC | 3 cut(s) | 559, 616, 1258 |
| Hpy99I | CGWCG | 2 cut(s) | 210, 1262 |
| HpyAV | CCTTC | 1 cut(s) | 1134 |
| HpyCH4III | ACNGT | 5 cut(s) | 70, 189, 380, 556, 1168 |
| HpyCH4IV | ACGT | 3 cut(s) | 492, 565, 1260 |
| HpyF3I | CTNAG | 2 cut(s) | 303, 1299 |
| HpySE526I | ACGT | 3 cut(s) | 492, 565, 1260 |
| Hsp92II | CATG | 6 cut(s) | 301, 374, 553, 1145, 1192, 1339 |
| HspAI | GCGC | 1 cut(s) | 61 |
| Kzo9I | GATC | 1 cut(s) | 277 |
| LguI | GCTCTTC | 1 cut(s) | 822 |
| LmnI | GCTCC | 1 cut(s) | 352 |
| Lsp1109I | GCAGC | 2 cut(s) | 249, 985 |
| LweI | GCATC | 4 cut(s) | 72, 689, 917, 960 |
| MaeII | ACGT | 3 cut(s) | 492, 565, 1260 |
| MaeIII | GTNAC | 1 cut(s) | 790 |
| MalI | GATC | 1 cut(s) | 279 |
| MboI | GATC | 1 cut(s) | 277 |
| MboII | GAAGA | 9 cut(s) | 18, 91, 209, 431, 506, 557, 750, 839, 980 |
| MfeI | CAATTG | 1 cut(s) | 248 |
| MflI | RGATCY | 1 cut(s) | 277 |
| MhlI | GDGCHC | 1 cut(s) | 834 |
| MluCI | AATT | 8 cut(s) | 163, 248, 386, 405, 864, 891, 1220, 1319 |
| MlyI | GAGTC | 3 cut(s) | 949, 1070, 1129 |
| MmeI | TCCRAC | 2 cut(s) | 330, 606 |
| MnlI | CCTC | 8 cut(s) | 107, 687, 792, 877, 1142, 1222, 1225, 1258 |
| Mph1103I | ATGCAT | 1 cut(s) | 583 |
| MroXI | GAANNNNTTC | 1 cut(s) | 891 |
| MspCI | CTTAAG | 2 cut(s) | 961, 1087 |
| MspI | CCGG | 2 cut(s) | 924, 1020 |
| MspR9I | CCNGG | 2 cut(s) | 487, 1021 |
| MunI | CAATTG | 1 cut(s) | 248 |
| Mva1269I | GAATGC | 2 cut(s) | 434, 939 |
| MvaI | CCWGG | 1 cut(s) | 487 |
| MvnI | CGCG | 1 cut(s) | 275 |
| NciI | CCSGG | 1 cut(s) | 1021 |
| NdeI | CATATG | 1 cut(s) | 635 |
| NdeII | GATC | 1 cut(s) | 277 |
| NlaIII | CATG | 6 cut(s) | 301, 374, 553, 1145, 1192, 1339 |
| NlaIV | GGNNCC | 2 cut(s) | 118, 724 |
| NsiI | ATGCAT | 1 cut(s) | 583 |
| NspI | RCATGY | 1 cut(s) | 374 |
| PaeR7I | CTCGAG | 2 cut(s) | 56, 803 |
| PagI | TCATGA | 1 cut(s) | 1188 |
| PciSI | GCTCTTC | 1 cut(s) | 822 |
| PctI | GAATGC | 2 cut(s) | 434, 939 |
| PdmI | GAANNNNTTC | 1 cut(s) | 891 |
| PfeI | GAWTC | 2 cut(s) | 903, 1343 |
| Pfl23II | CGTACG | 1 cut(s) | 1071 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1330 |
| PkrI | GCNGC | 3 cut(s) | 236, 239, 975 |
| PleI | GAGTC | 3 cut(s) | 949, 1070, 1128 |
| PpsI | GAGTC | 3 cut(s) | 949, 1070, 1128 |
| PpuMI | RGGWCCY | 1 cut(s) | 116 |
| Psp124BI | GAGCTC | 1 cut(s) | 834 |
| Psp5II | RGGWCCY | 1 cut(s) | 116 |
| Psp6I | CCWGG | 1 cut(s) | 485 |
| PspFI | CCCAGC | 1 cut(s) | 119 |
| PspGI | CCWGG | 1 cut(s) | 485 |
| PspLI | CGTACG | 1 cut(s) | 1071 |
| PspN4I | GGNNCC | 2 cut(s) | 118, 724 |
| PspPI | GGNCC | 2 cut(s) | 116, 210 |
| PspPPI | RGGWCCY | 1 cut(s) | 116 |
| PspXI | VCTCGAGB | 2 cut(s) | 56, 803 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1131, 1163 |
| PsuI | RGATCY | 1 cut(s) | 277 |
| RsaI | GTAC | 4 cut(s) | 272, 319, 377, 1073 |
| RsaNI | GTAC | 4 cut(s) | 271, 318, 376, 1072 |
| SacI | GAGCTC | 1 cut(s) | 834 |
| SalI | GTCGAC | 1 cut(s) | 1256 |
| SapI | GCTCTTC | 1 cut(s) | 822 |
| SatI | GCNGC | 3 cut(s) | 235, 238, 974 |
| Sau3AI | GATC | 1 cut(s) | 277 |
| Sau96I | GGNCC | 2 cut(s) | 116, 210 |
| SchI | GAGTC | 3 cut(s) | 949, 1070, 1129 |
| ScrFI | CCNGG | 2 cut(s) | 487, 1021 |
| SduI | GDGCHC | 1 cut(s) | 834 |
| SfaNI | GCATC | 4 cut(s) | 72, 689, 917, 960 |
| Sfr274I | CTCGAG | 2 cut(s) | 56, 803 |
| SinI | GGWCC | 2 cut(s) | 116, 210 |
| SlaI | CTCGAG | 2 cut(s) | 56, 803 |
| SmlI | CTYRAG | 4 cut(s) | 56, 803, 961, 1087 |
| SmoI | CTYRAG | 4 cut(s) | 56, 803, 961, 1087 |
| Sse9I | AATT | 8 cut(s) | 163, 248, 386, 405, 864, 891, 1220, 1319 |
| SsiI | CCGC | 6 cut(s) | 232, 235, 275, 765, 930, 1053 |
| SspI | AATATT | 3 cut(s) | 85, 1033, 1292 |
| SstI | GAGCTC | 1 cut(s) | 834 |
| StyD4I | CCNGG | 2 cut(s) | 485, 1019 |
| StyI | CCWWGG | 1 cut(s) | 1003 |
| TaaI | ACNGT | 5 cut(s) | 70, 189, 380, 556, 1168 |
| TaiI | ACGT | 3 cut(s) | 495, 568, 1263 |
| TaqI | TCGA | 7 cut(s) | 57, 205, 804, 818, 1137, 1227, 1257 |
| TasI | AATT | 8 cut(s) | 163, 248, 386, 405, 864, 891, 1220, 1319 |
| TatI | WGTACW | 1 cut(s) | 317 |
| TauI | GCSGC | 1 cut(s) | 237 |
| TfiI | GAWTC | 2 cut(s) | 903, 1343 |
| TscAI | CASTG | 1 cut(s) | 73 |
| TseI | GCWGC | 2 cut(s) | 237, 973 |
| TspDTI | ATGAA | 6 cut(s) | 22, 27, 77, 286, 884, 1205 |
| TspGWI | ACGGA | 2 cut(s) | 223, 896 |
| TspRI | CASTG | 1 cut(s) | 73 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1330 |
| Vha464I | CTTAAG | 2 cut(s) | 961, 1087 |
| VpaK11BI | GGWCC | 2 cut(s) | 116, 210 |
| XapI | RAATTY | 3 cut(s) | 405, 891, 1319 |
| XceI | RCATGY | 1 cut(s) | 374 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1104 |
| XhoI | CTCGAG | 2 cut(s) | 56, 803 |
| XmiI | GTMKAC | 1 cut(s) | 1257 |
| XmnI | GAANNNNTTC | 1 cut(s) | 891 |
| Zsp2I | ATGCAT | 1 cut(s) | 583 |