Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0013401

Physical Location & Seq

Genomic Coordinates Reverse (-)

1296356 .. 1302477

Gene Structure 6122 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G04540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2502 bp

ATGACGGCGCTGAGACCTCTCTCCGGGCGATCACGATCGCTGCGATGTTCGTCGGAGAAGATGGAAGGTACCGGAAGCTGGGACGTGCTTGAATGGACTAAACTCGATTCAGCTTCATGGTCAGGCTCGTATTCGAATTTGGATTGCTTGCTGGAATCTGAGAGGATCATCTTCGAGGCTTGTGGAGTTATTCTCATTAACACCGATGAGGCAGGGACCCTCTTGTTATCAAATTTCCGTATTCTGTTTTTGAGTGAAGGAACCAGAAAGCTTGTTCCACTTGGTACAATTCCATTTGTAGCTATCGAGAAGTTTAACAAACTGGCGCCGAAAGTTCAATCAAACAAATATCACAACAATGAGAATGCACCGACACGACTTTTACAGGTCACTGGAAAAGATATGAGAATAGTTGTCTATGGTTTTCGACCTGGTACCAAGCAGAGACATACTGTAGTTGATACGCTATTGAGGTGTAACAAACCAGAGAGAGTATGGGATCTTTATGCTTTTACATGCGGACCTTCCCAATTCGGTAACACAAACCCAAAGGAAAGATTGCTTAATGAATATTTTCGCCTTCTCGGAAAAAGTTCACAACGAGCGTCAATGAATATGATTGAAGACGGTTCATTCACTCTATCCAATGATCTTTGGCGTATAACTAACTTAAACTCAAATTATGACTTGTGCCAGAGTTATCCGTTTGCTTTGATGGTTCCAAAATCCATTAGTGATGAAGAGCTGCTCCAGACTTCTACTTTCCGGGCAAGATGTCGCTTACCTGTGATCTCGTGGTGTCATCCAGGAAGTGGAGCTGTGATTGCTCGCTCATCACAACCTTTAGTTGGTCTGATGATGAACATGAGGAGTAACTCTGATGAGAAACTTGTTGCTTCATTCTGCACTCAATTAGCTGGTCATAAGGGAGCACGAAGGAAGCTTTATATCGTAGATGCAAGACCTAGGAAAAATGCATTAGCAAATGGAGCAAAGGGAGGAGGCTCAGAATCATCTTCAAATTATTTGCAATCTGAAATTGTTTTTTTGGGGATAGACAACATACATGCAATGAGAGAGAGCTTTTCCCGCCTTAGGGATTATTTAGATATGCATGGTACAACATCATCCGATGGGACGTCATCATTCTTGAGGCATGGTGGCTGGACGTGGGGTGGAGGTAATCTCAGTAGTATGTCTGCTTCAGTATCCGTGCTTGGAGATAGTGGTTGGTTGAGTCACATTCAGAGCATCTTAGCTGGTGTAGCATGGATTGCTGCACGTGTTGCTATGGAGTCAGCATCAGTTCTTGTGCACTGCAGTGATGGATGGGACAGAACAACTCAGCTGGTTTCTCTTGCATGCTTATTGCTTGATCCTTACTACAGAACATTTTCTGGGTTTCAGGCTCTTGTCGAAAAGGATTGGTTATCATTTGGTCACCCATTTTCGGATCGGGTGGGAATGCCAAACGTGTCTGAATCTGGTAATTTTGAATTACCAATTCAGTCTTCTTCTGCTCGAAGTTTTCCTTCATCTCCAGTGCGGCAATCTCCAGGATCAGCAGCTGCTCAATCCTCTAGCTCTTCATATGGGCTGAACAACTATTCTCCTATATTTTTGCAGTGGCTTGATTGCATTTCACAGCTAATGCGGATGTATCCTTCTGCTTTCGAGTTTTCTCCGACTTTTCTGGTAGATTTCATAGACTGCTTGCTTTCGTGTCGTTTTGGGAACTTTTTGTGCAATAGTGAAAAAGAGAGGCAGCAATGTGGGATTTCTGAAACCTGTGGATGCATTTGGGCCTACTTGGCTGATTTGCGTTCCTCCAGTGGAACTTCTCATGTCCACTGTAACCCATTTTATGATCCTTCAAGATATGATGGCCCATTATTACCTCCTGCAGCAGCTCTAGCCCCAACTCTCTGGCCCCAGTTCCATCTCCGGTGGGCCTGCCCTGTGGAGCCGAACGTCACAGAAACCGAAGACCAATGTAGAGCCATGACTGTTAAGTATTCAGAAATGAAGAAGGAAAAAGAAGAAGCAGAGAGAAAGGTAGATGAGTTATCTTCTGCAATGGAGTCATTGAACGAAGAGTTACTGAACGAGAGAGATATAAGCCGTGCAGCTAGAGAATCAGCAAAGAGGGCTACAAAAGAGCGTGCAGTCATATCACGAGCTGTGCAGTCACTCGGCTGCAAAGTTAAATTCACAAGAAACGGAGATTGCACAGTTGAAGTAGAAGACGGGCCTCAGAAATGTTCACACTCAATTCCCCAAAAACAATCTGAGGACAACACCACAGATGTCTCAGAATCTATCTCATCGGTTACTGAACAAAATGTGTGTGAAGCAGTGTGTCCGTTGCGTACAAGAGAAGGAACGTGTAGATGGCCTGATGCGGGTTGTGCTCGAATCGGGAACCAATTTCTCGGGTTGAAAACAAACTTTGAAGCGTTTGATAATCTATGCGTCTACGACAGCTATTTCACAGCTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004438 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009987 GO:0009991 GO:0010035 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0023052 GO:0030258 GO:0031410 GO:0031668 GO:0031982 GO:0033554 GO:0034593 GO:0035556 GO:0042221 GO:0042578 GO:0042631 GO:0043226 GO:0043227 GO:0043229 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046486 GO:0046488 GO:0046839 GO:0046856 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0052629 GO:0052744 GO:0052866 GO:0065007 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071704 GO:0080134 GO:0097708 GO:0104004 GO:0106018 GO:1901700 GO:1901701 GO:2000070

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04070 map00562 map01100 map04070

Pfam Domains

Protein Families

Myotub-related

Protein Analysis

833

Amino Acids

92.59

Weight (kDa)

6.44

Isoelectric Point (pI)

54.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myotub-related	PF06602	207 - 589	1.4e-126	Myotubularin-like phosphatase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0013401)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10550 AT5G04540
fragaria_vesca	FvH4_7g06400
malus_domestica	MD02G1244600.v1.1 MD07G1072600.v1.1
prunus_persica	Prupe.2G090700_v2.0.a1 Prupe.2G090700_v2.0.a1
pyrus_communis	pycom02g21050 pycom07g05570
rosa_chinensis	RchiOBHm_Chr1g0334491
rosa_laevigata	RLG00000029449
rosa_roxburghii	Rroxscaffold_4G00316800
rosa_rugosa	Rorug01G0114300
rosa_samantha	Rh1AG139500 Rh1BG105700 Rh1CG131400 Rh1DG143400
rosa_wichuraiana	Rw1G011500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1142
Acc65I	GGTACC	2 cut(s)	68, 434
AccB1I	GGYRCC	3 cut(s)	68, 325, 434
AccB7I	CCANNNNNTGG	1 cut(s)	812
AccI	GTMKAC	1 cut(s)	2475
AciI	CCGC	5 cut(s)	519, 1090, 1546, 1654, 2402
AclWI	GGATC	6 cut(s)	173, 507, 1370, 1461, 1567, 1862
AcsI	RAATTY	3 cut(s)	136, 232, 2207
AcuI	CTGAAG	1 cut(s)	1188
AcvI	CACGTG	1 cut(s)	1283
AcyI	GRCGYC	2 cut(s)	326, 1139
AfaI	GTAC	5 cut(s)	70, 286, 436, 1120, 2371
AfiI	CCNNNNNNNGG	8 cut(s)	23, 78, 812, 848, 1095, 1096, 1450, 2402
AflIII	ACRYGT	3 cut(s)	1282, 1473, 2384
AjiI	CACGTC	2 cut(s)	85, 1170
AjnI	CCWGG	3 cut(s)	430, 805, 1555
AjuI	GAANNNNNNNTTGG	2 cut(s)	1495, 1527
AleI	CACNNNNGTG	1 cut(s)	1320
Alw21I	GWGCWC	3 cut(s)	934, 1317, 2413
Alw26I	GTCTC	3 cut(s)	7, 439, 2314
Alw44I	GTGCAC	1 cut(s)	1313
AlwI	GGATC	6 cut(s)	173, 507, 1370, 1461, 1567, 1862
AlwNI	CAGNNNCTG	1 cut(s)	1568
Ama87I	CYCGRG	1 cut(s)	2432
AoxI	GGCC	6 cut(s)	1803, 1885, 1928, 1950, 2249, 2393
ApaLI	GTGCAC	1 cut(s)	1313
ApoI	RAATTY	3 cut(s)	136, 232, 2207
Asp700I	GAANNNNTTC	3 cut(s)	573, 592, 1393
Asp718I	GGTACC	2 cut(s)	68, 434
AspA2I	CCTAGG	1 cut(s)	965
AspLEI	GCGC	2 cut(s)	10, 328
AspS9I	GGNCC	7 cut(s)	216, 521, 1803, 1886, 1929, 1950, 2249
AsuC2I	CCSGG	2 cut(s)	25, 767
AsuHPI	GGTGA	1 cut(s)	1433
AsuII	TTCGAA	1 cut(s)	134
AvaI	CYCGRG	1 cut(s)	2432
AvaII	GGWCC	2 cut(s)	216, 521
AvrII	CCTAGG	1 cut(s)	965
AxyI	CCTNAGG	1 cut(s)	1094
BaeGI	GKGCMC	1 cut(s)	1317
BanI	GGYRCC	3 cut(s)	68, 325, 434
BarI	GAAGNNNNNNTAC	2 cut(s)	1186, 1218
BauI	CACGAG	2 cut(s)	793, 2175
BbrPI	CACGTG	1 cut(s)	1283
BbsI	GAAGAC	4 cut(s)	630, 1503, 1992, 2250
Bbv12I	GWGCWC	3 cut(s)	934, 1317, 2413
BccI	CCATC	8 cut(s)	55, 709, 1127, 1319, 1323, 1877, 1947, 2385
BceAI	ACGGC	2 cut(s)	21, 2106
BciT130I	CCWGG	3 cut(s)	432, 807, 1557
BciVI	GTATCC	2 cut(s)	1219, 1671
BcnI	CCSGG	2 cut(s)	25, 767
BcoDI	GTCTC	3 cut(s)	7, 439, 2314
BfaI	CTAG	4 cut(s)	966, 1581, 1913, 2130
BfmI	CTRYAG	4 cut(s)	453, 1318, 1384, 1902
BfoI	RGCGCY	2 cut(s)	11, 329
BfuI	GTATCC	2 cut(s)	1219, 1671
BglI	GCCNNNNNGGC	1 cut(s)	1811
BlnI	CCTAGG	1 cut(s)	965
Bme1390I	CCNGG	5 cut(s)	25, 432, 767, 807, 1557
Bme18I	GGWCC	2 cut(s)	216, 521
BmeT110I	CYCGRG	1 cut(s)	2432
BmgBI	CACGTC	2 cut(s)	85, 1170
BmgT120I	GGNCC	7 cut(s)	216, 521, 1803, 1886, 1929, 1950, 2249
BmrFI	CCNGG	5 cut(s)	25, 432, 767, 807, 1557
BmrI	ACTGGG	1 cut(s)	1927
BmsI	GCATC	5 cut(s)	946, 1260, 1310, 1784, 2389
BmuI	ACTGGG	1 cut(s)	1927
BpiI	GAAGAC	4 cut(s)	630, 1503, 1992, 2250
BplI	GAGNNNNNCTC	4 cut(s)	177, 209, 1170, 1202
BpmI	CTGGAG	4 cut(s)	734, 1524, 1539, 1813
Bpu14I	TTCGAA	1 cut(s)	134
BpuEI	CTTGAG	1 cut(s)	1171
BpuMI	CCSGG	2 cut(s)	25, 767
BsaAI	YACGTR	1 cut(s)	1283
BsaBI	GATNNNNATC	1 cut(s)	34
BsaHI	GRCGYC	2 cut(s)	326, 1139
BsaI	GGTCTC	1 cut(s)	7
BsaJI	CCNNGG	1 cut(s)	965
BsaWI	WCCGGW	2 cut(s)	71, 1944
Bsc4I	CCNNNNNNNGG	8 cut(s)	23, 78, 812, 848, 1095, 1096, 1450, 2402
Bse1I	ACTGG	5 cut(s)	327, 397, 1541, 1830, 1933
Bse21I	CCTNAGG	1 cut(s)	1094
Bse3DI	GCAATG	3 cut(s)	1077, 1775, 2082
Bse8I	GATNNNNATC	1 cut(s)	34
BseBI	CCWGG	3 cut(s)	432, 807, 1557
BseDI	CCNNGG	1 cut(s)	965
BseGI	GGATG	5 cut(s)	802, 1127, 1334, 1662, 1799
BseJI	GATNNNNATC	1 cut(s)	34
BseLI	CCNNNNNNNGG	8 cut(s)	23, 78, 812, 848, 1095, 1096, 1450, 2402
BseMI	GCAATG	3 cut(s)	1077, 1775, 2082
BseMII	CTCAG	7 cut(s)	150, 1020, 1201, 1358, 2267, 2280, 2325
BseNI	ACTGG	5 cut(s)	327, 397, 1541, 1830, 1933
BseRI	GAGGAG	2 cut(s)	883, 1014
BseSI	GKGCMC	1 cut(s)	1317
BseYI	CCCAGC	1 cut(s)	78
BsgI	GTGCAG	5 cut(s)	889, 1263, 2145, 2184, 2204
Bsh1285I	CGRYCG	1 cut(s)	38
BshFI	GGCC	6 cut(s)	1805, 1887, 1930, 1952, 2251, 2395
BshNI	GGYRCC	3 cut(s)	68, 325, 434
BsiEI	CGRYCG	1 cut(s)	38
BsiHKAI	GWGCWC	3 cut(s)	934, 1317, 2413
BsiHKCI	CYCGRG	1 cut(s)	2432
BsiSI	CCGG	4 cut(s)	24, 72, 766, 1945
BslFI	GGGAC	4 cut(s)	95, 229, 1150, 1346
BslI	CCNNNNNNNGG	8 cut(s)	23, 78, 812, 848, 1095, 1096, 1450, 2402
BsmAI	GTCTC	3 cut(s)	7, 439, 2314
BsmFI	GGGAC	4 cut(s)	95, 229, 1150, 1346
BsmI	GAATGC	2 cut(s)	370, 1470
BsnI	GGCC	6 cut(s)	1805, 1887, 1930, 1952, 2251, 2395
Bso31I	GGTCTC	1 cut(s)	7
BsoBI	CYCGRG	1 cut(s)	2432
Bsp119I	TTCGAA	1 cut(s)	134
Bsp1286I	GDGCHC	3 cut(s)	934, 1317, 2413
BspACI	CCGC	5 cut(s)	519, 1090, 1546, 1654, 2402
BspANI	GGCC	6 cut(s)	1805, 1887, 1930, 1952, 2251, 2395
BspCNI	CTCAG	7 cut(s)	151, 1019, 1200, 1357, 2266, 2281, 2324
BspMAI	CTGCAG	2 cut(s)	1322, 1906
BspPI	GGATC	6 cut(s)	173, 507, 1370, 1461, 1567, 1862
BspQI	GCTCTTC	2 cut(s)	735, 1591
BspT104I	TTCGAA	1 cut(s)	134
BspT107I	GGYRCC	3 cut(s)	68, 325, 434
BspTNI	GGTCTC	1 cut(s)	7
BsrDI	GCAATG	3 cut(s)	1077, 1775, 2082
BsrI	ACTGG	5 cut(s)	327, 397, 1541, 1830, 1933
BssECI	CCNNGG	1 cut(s)	965
BssNI	GRCGYC	2 cut(s)	326, 1139
BssSI	CACGAG	2 cut(s)	793, 2175
BssT1I	CCWWGG	1 cut(s)	965
Bst2BI	CACGAG	2 cut(s)	793, 2175
Bst2UI	CCWGG	3 cut(s)	432, 807, 1557
Bst4CI	ACNGT	5 cut(s)	454, 629, 1853, 2008, 2233
Bst6I	CTCTTC	3 cut(s)	735, 1591, 2088
BstACI	GRCGYC	2 cut(s)	326, 1139
BstAPI	GCANNNNNTGC	2 cut(s)	1274, 1286
BstBAI	YACGTR	1 cut(s)	1283
BstBI	TTCGAA	1 cut(s)	134
BstC8I	GCNNGC	6 cut(s)	149, 829, 1363, 1715, 1954, 2163
BstEII	GGTNACC	1 cut(s)	1439
BstF5I	GGATG	5 cut(s)	802, 1127, 1334, 1662, 1799
BstH2I	RGCGCY	2 cut(s)	11, 329
BstHHI	GCGC	2 cut(s)	10, 328
BstMAI	GTCTC	3 cut(s)	7, 439, 2314
BstMCI	CGRYCG	1 cut(s)	38
BstNI	CCWGG	3 cut(s)	432, 807, 1557
BstNSI	RCATGY	3 cut(s)	519, 1070, 1365
BstPI	GGTNACC	1 cut(s)	1439
BstSCI	CCNGG	5 cut(s)	23, 430, 765, 805, 1555
BstSFI	CTRYAG	4 cut(s)	453, 1318, 1384, 1902
BstSLI	GKGCMC	1 cut(s)	1317
BstV2I	GAAGAC	4 cut(s)	630, 1503, 1992, 2250
BstX2I	RGATCY	1 cut(s)	499
BstXI	CCANNNNNNTGG	1 cut(s)	1926
BstYI	RGATCY	1 cut(s)	499
Bsu36I	CCTNAGG	1 cut(s)	1094
BsuI	GTATCC	2 cut(s)	1219, 1671
BsuRI	GGCC	6 cut(s)	1805, 1887, 1930, 1952, 2251, 2395
BtgZI	GCGATG	1 cut(s)	58
BtrI	CACGTC	2 cut(s)	85, 1170
BtsCI	GGATG	5 cut(s)	802, 1127, 1334, 1662, 1799
BtsI	GCAGTG	4 cut(s)	1315, 1327, 1631, 2361
BtsIMutI	CAGTG	8 cut(s)	390, 1315, 1327, 1548, 1631, 1837, 1849, 2361
Cac8I	GCNNGC	6 cut(s)	149, 829, 1363, 1715, 1954, 2163
CaiI	CAGNNNCTG	1 cut(s)	1568
CfoI	GCGC	2 cut(s)	10, 328
Cfr13I	GGNCC	7 cut(s)	216, 521, 1803, 1886, 1929, 1950, 2249
CseI	GACGC	2 cut(s)	594, 2461
CsiI	ACCWGGT	1 cut(s)	430
Csp6I	GTAC	5 cut(s)	69, 285, 435, 1119, 2370
CviQI	GTAC	5 cut(s)	69, 285, 435, 1119, 2370
DinI	GGCGCC	1 cut(s)	327
Eam1104I	CTCTTC	3 cut(s)	735, 1591, 2088
EarI	CTCTTC	3 cut(s)	735, 1591, 2088
Eco130I	CCWWGG	1 cut(s)	965
Eco31I	GGTCTC	1 cut(s)	7
Eco47I	GGWCC	2 cut(s)	216, 521
Eco57I	CTGAAG	1 cut(s)	1188
Eco72I	CACGTG	1 cut(s)	1283
Eco81I	CCTNAGG	1 cut(s)	1094
Eco88I	CYCGRG	1 cut(s)	2432
Eco91I	GGTNACC	1 cut(s)	1439
EcoO109I	RGGNCCY	1 cut(s)	216
EcoO65I	GGTNACC	1 cut(s)	1439
EcoRII	CCWGG	3 cut(s)	430, 805, 1555
EcoT14I	CCWWGG	1 cut(s)	965
EcoT22I	ATGCAT	3 cut(s)	979, 1116, 1799
EgeI	GGCGCC	1 cut(s)	327
EheI	GGCGCC	1 cut(s)	327
ErhI	CCWWGG	1 cut(s)	965
FalI	AAGNNNNNCTT	2 cut(s)	1516, 1548
FaqI	GGGAC	4 cut(s)	95, 229, 1150, 1346
FauI	CCCGC	2 cut(s)	1097, 2395
FauNDI	CATATG	1 cut(s)	1591
FblI	GTMKAC	1 cut(s)	2475
FokI	GGATG	5 cut(s)	789, 1114, 1341, 1669, 1806
FspBI	CTAG	4 cut(s)	966, 1581, 1913, 2130
GlaI	GCGC	2 cut(s)	9, 327
GsaI	CCCAGC	1 cut(s)	82
GsuI	CTGGAG	4 cut(s)	734, 1524, 1539, 1813
HaeII	RGCGCY	2 cut(s)	11, 329
HaeIII	GGCC	6 cut(s)	1805, 1887, 1930, 1952, 2251, 2395
HapII	CCGG	4 cut(s)	24, 72, 766, 1945
HgaI	GACGC	2 cut(s)	594, 2461
HhaI	GCGC	2 cut(s)	10, 328
Hin1I	GRCGYC	2 cut(s)	326, 1139
Hin6I	GCGC	2 cut(s)	8, 326
HinP1I	GCGC	2 cut(s)	8, 326
HindIII	AAGCTT	2 cut(s)	269, 941
HpaII	CCGG	4 cut(s)	24, 72, 766, 1945
HphI	GGTGA	1 cut(s)	1433
Hpy166II	GTNNAC	5 cut(s)	596, 1315, 1849, 2264, 2476
Hpy188III	TCNNGA	7 cut(s)	33, 307, 751, 1150, 1875, 2175, 2419
Hpy8I	GTNNAC	5 cut(s)	596, 1315, 1849, 2264, 2476
Hpy99I	CGWCG	1 cut(s)	55
HpyCH4III	ACNGT	5 cut(s)	454, 629, 1853, 2008, 2233
HpyCH4IV	ACGT	7 cut(s)	84, 1139, 1169, 1282, 1473, 1971, 2384
HpySE526I	ACGT	7 cut(s)	84, 1139, 1169, 1282, 1473, 1971, 2384
Hsp92I	GRCGYC	2 cut(s)	326, 1139
HspAI	GCGC	2 cut(s)	8, 326
KasI	GGCGCC	1 cut(s)	325
KflI	GGGWCCC	1 cut(s)	216
KpnI	GGTACC	2 cut(s)	72, 438
LguI	GCTCTTC	2 cut(s)	735, 1591
LmnI	GCTCC	5 cut(s)	753, 815, 929, 989, 1963
LweI	GCATC	5 cut(s)	946, 1260, 1310, 1784, 2389
MabI	ACCWGGT	1 cut(s)	430
MaeI	CTAG	4 cut(s)	966, 1581, 1913, 2130
MaeII	ACGT	7 cut(s)	84, 1139, 1169, 1282, 1473, 1971, 2384
MflI	RGATCY	1 cut(s)	499
MhlI	GDGCHC	3 cut(s)	934, 1317, 2413
Mly113I	GGCGCC	1 cut(s)	326
MlyI	GAGTC	3 cut(s)	1246, 1304, 2090
MmeI	TCCRAC	2 cut(s)	33, 1709
Mph1103I	ATGCAT	3 cut(s)	979, 1116, 1799
MroXI	GAANNNNTTC	3 cut(s)	573, 592, 1393
MseI	TTAA	6 cut(s)	198, 315, 564, 671, 2010, 2205
MslI	CAYNNNNRTG	2 cut(s)	357, 1320
MspA1I	CMGCKG	3 cut(s)	1348, 1568, 2495
MspI	CCGG	4 cut(s)	24, 72, 766, 1945
MspR9I	CCNGG	5 cut(s)	25, 432, 767, 807, 1557
Mva1269I	GAATGC	2 cut(s)	370, 1470
MvaI	CCWGG	3 cut(s)	432, 807, 1557
NarI	GGCGCC	1 cut(s)	326
NciI	CCSGG	2 cut(s)	25, 767
NdeI	CATATG	1 cut(s)	1591
NmeAIII	GCCGAG	1 cut(s)	2172
NmuCI	GTSAC	5 cut(s)	388, 1238, 1439, 1972, 2187
NsiI	ATGCAT	3 cut(s)	979, 1116, 1799
NspI	RCATGY	3 cut(s)	519, 1070, 1365
NspV	TTCGAA	1 cut(s)	134
OliI	CACNNNNGTG	1 cut(s)	1320
PaeI	GCATGC	1 cut(s)	1365
PciSI	GCTCTTC	2 cut(s)	735, 1591
PcsI	WCGNNNNNNNCGW	1 cut(s)	40
PctI	GAATGC	2 cut(s)	370, 1470
PdmI	GAANNNNTTC	3 cut(s)	573, 592, 1393
PfeI	GAWTC	7 cut(s)	107, 155, 1010, 1481, 2135, 2315, 2415
PflMI	CCANNNNNTGG	1 cut(s)	812
PfoI	TCCNGGA	2 cut(s)	805, 1555
Ple19I	CGATCG	1 cut(s)	38
PleI	GAGTC	3 cut(s)	1245, 1303, 2089
PluTI	GGCGCC	1 cut(s)	329
PmaCI	CACGTG	1 cut(s)	1283
PmlI	CACGTG	1 cut(s)	1283
PpsI	GAGTC	3 cut(s)	1245, 1303, 2089
Ppu21I	YACGTR	1 cut(s)	1283
PpuMI	RGGWCCY	1 cut(s)	216
Psp5II	RGGWCCY	1 cut(s)	216
Psp6I	CCWGG	3 cut(s)	430, 805, 1555
PspCI	CACGTG	1 cut(s)	1283
PspEI	GGTNACC	1 cut(s)	1439
PspFI	CCCAGC	1 cut(s)	78
PspGI	CCWGG	3 cut(s)	430, 805, 1555
PspPI	GGNCC	7 cut(s)	216, 521, 1803, 1886, 1929, 1950, 2249
PspPPI	RGGWCCY	1 cut(s)	216
PstI	CTGCAG	2 cut(s)	1322, 1906
PstNI	CAGNNNCTG	1 cut(s)	1568
PsuI	RGATCY	1 cut(s)	499
PvuI	CGATCG	1 cut(s)	38
PvuII	CAGCTG	3 cut(s)	1348, 1568, 2495
RsaI	GTAC	5 cut(s)	70, 286, 436, 1120, 2371
RsaNI	GTAC	5 cut(s)	69, 285, 435, 1119, 2370
RseI	CAYNNNNRTG	2 cut(s)	357, 1320
SapI	GCTCTTC	2 cut(s)	735, 1591
SaqAI	TTAA	6 cut(s)	198, 315, 564, 671, 2010, 2205
Sau96I	GGNCC	7 cut(s)	216, 521, 1803, 1886, 1929, 1950, 2249
SchI	GAGTC	3 cut(s)	1246, 1304, 2090
ScrFI	CCNGG	5 cut(s)	25, 432, 767, 807, 1557
SduI	GDGCHC	3 cut(s)	934, 1317, 2413
SexAI	ACCWGGT	1 cut(s)	430
SfaNI	GCATC	5 cut(s)	946, 1260, 1310, 1784, 2389
SfcI	CTRYAG	4 cut(s)	453, 1318, 1384, 1902
SfoI	GGCGCC	1 cut(s)	327
SfuI	TTCGAA	1 cut(s)	134
SinI	GGWCC	2 cut(s)	216, 521
SmiMI	CAYNNNNRTG	2 cut(s)	357, 1320
SmlI	CTYRAG	1 cut(s)	1150
SmoI	CTYRAG	1 cut(s)	1150
SphI	GCATGC	1 cut(s)	1365
SsiI	CCGC	5 cut(s)	519, 1090, 1546, 1654, 2402
SspDI	GGCGCC	1 cut(s)	325
SspI	AATATT	1 cut(s)	572
SspMI	CTAG	4 cut(s)	966, 1581, 1913, 2130
StyD4I	CCNGG	5 cut(s)	23, 430, 765, 805, 1555
StyI	CCWWGG	1 cut(s)	965
TaaI	ACNGT	5 cut(s)	454, 629, 1853, 2008, 2233
TaiI	ACGT	7 cut(s)	87, 1142, 1172, 1285, 1476, 1974, 2387
TaqI	TCGA	9 cut(s)	105, 134, 174, 306, 427, 1416, 1522, 1674, 2413
TauI	GCSGC	1 cut(s)	1549
TfiI	GAWTC	7 cut(s)	107, 155, 1010, 1481, 2135, 2315, 2415
Tru1I	TTAA	6 cut(s)	198, 315, 564, 671, 2010, 2205
Tru9I	TTAA	6 cut(s)	198, 315, 564, 671, 2010, 2205
TscAI	CASTG	8 cut(s)	397, 1322, 1327, 1548, 1631, 1837, 1856, 2361
TseFI	GTSAC	5 cut(s)	388, 1238, 1439, 1972, 2187
Tsp45I	GTSAC	5 cut(s)	388, 1238, 1439, 1972, 2187
TspGWI	ACGGA	5 cut(s)	227, 693, 1201, 2235, 2352
TspRI	CASTG	8 cut(s)	397, 1322, 1327, 1548, 1631, 1837, 1856, 2361
Van91I	CCANNNNNTGG	1 cut(s)	812
VneI	GTGCAC	1 cut(s)	1313
VpaK11BI	GGWCC	2 cut(s)	216, 521
XapI	RAATTY	3 cut(s)	136, 232, 2207
XceI	RCATGY	3 cut(s)	519, 1070, 1365
XcmI	CCANNNNNNNNNTGG	1 cut(s)	492
XmaJI	CCTAGG	1 cut(s)	965
XmiI	GTMKAC	1 cut(s)	2475
XmnI	GAANNNNTTC	3 cut(s)	573, 592, 1393
XspI	CTAG	4 cut(s)	966, 1581, 1913, 2130
ZraI	GACGTC	1 cut(s)	1140
Zsp2I	ATGCAT	3 cut(s)	979, 1116, 1799

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.