Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0013401

Physical Location & Seq

Genomic Coordinates Forward (+)

14329395 .. 14343388

Gene Structure 13994 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G090700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2739 bp

ATGCAGGTAAAGCCCATAGCCGATTTCCACCCACAACAAACAGCGACGACAAAACCTCACGTCTCCATCTCCATTTTCTCGAGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTATTATCTTGTCAAAAGTTGGACAAACGGTGTCGTTTCGCCGCATGGCAGCGCCAAAGCCCCGCTCAAGCTCAGGTCGATCGACGCCTCTCAGGGACTCTTCCGAGTCCGAGAAGATGGAGGCCACTGGTAGCTGGGACGCCCTCGACTGGACCATTGAGCCGGTTTCGCGGTCCGTTTCTCGGTCGGTTTCGCGTGTACAATTGGAGTGCTTGCTTGAAGCTGAACAGGTCGAAGTTGAGGGGTATGGCGTTGTTCTTGTAAATACTGATGAGGCAGGTACCTTGATAGTGACCAATTTTCGTCTTCTTTTCTTGAGTGAGGGAACTAGGAATGTTATTGCACTTGGCACGATACCTTTGGCAACAATTGAGAAGTTCAACAAACTTGTTGTAAAGAATCAATCAACCCCTCGTCAATCTGACAAGACTCCATCAAGGCGACTTCTTCAGGTCATTGGTAAAGACATGAGGATCATCGTCTTTGGCTTTCGCCCTAAAACAAGGCAGAGACGTGCAGTATTTAATGCACTATTAAAGTGTACAAAGCCAGCGAGTCTATGGGATCTTTATGCTTTTGTTTCTGGACCTTCCAAATTCAATAACACCAACCCAAAGGTGCGGTTACTAAATGAGTATCTTCGGCTTCTCGGAAAAGGCTCCTTACGTGCATCGATGAATATGATTGAGGATGGTTCATTCACATTTTCCAATGATTTGTGGAGAATAAGTAGTATAAATTCCAGCTATACAATGTGCCAGAGTTATCCATTTGCCTTGATAGTTCCGAAATCCATTACTGATGATGAAGTGCTCCAGGCTTCCAATTTCCGTGCAAGAGGTCGCTTGCCTGTAGTTACGTGGTGTCATCCAAAAACTGGAGCAGTTCTTGCACGTTCTTCCCAACCCTTGGTTGGTATCATGATGAATATGAGAAGCAACACCGATGAAAAGATTGTTGCTGCACTTTGTGCTCAACTTACTGGTACAAGAGGTAAACGGAGGAAGCTATATATAGCAGATGCGAGACCCCGAAAAAATGCTTTAGCTAATGGTGCCATGGGAGGTGGCTCTGAGTCATCTTCAAATTATTTTCAATCTGAGATAGTTTTCTTTGGGATAGACAACATACACGCAATGAGAGAGAGTTTTGCCCGGCTTAGGGACTACTTAGACACTCATGGTGCGGCTTCATCGGATGGGATGTCATCTTTCTTGAGACACGGTGGATGGACTTGGGGTGGAGGCAACCTTAGCAGTATGTCTGCTTCAGTGTCAACTCTCGGGGACAGTGGTTGGTTAATACATGTTCAAAGTGTCTTGGCTGGTTCTGCTTGGATTGCTGCCCGTGTTGCTTTGGAGTCGGCATCAGTGCTTGTGCATTGTAGTGATGGATGGGACAGAACTACTCAGCTGATTTCGCTTGCCAATTTGCTGCTTGATCCATACTATCGGACAGTCACAGGATTTCAGGCACTTATTGAGAAAGATTGGCTAGCATTTGGTCATCCATTTGCAGATCGAGTGGGCATGTCAACTGTAACAGGAAGTTGCAGCATAGCTTCTGAATTGCCAAGGCAGTCCTCTACTGGGAGTATCCAGTCATCACCCATGCGTCAGCCATCAGCATCGTTCACATCTCAACCACCTACTTCTCATGCACAGAACAACTATTCTCCCATATTTCTGCAGTGGGTTGATTGCGTTTCACAATTGTTGCGAATGTATCCTTTCGCTTTTGAGTTCTCTTCAGCTTTCCTGGTGGATCTTCTGGACTGTGTTCTATCCTGTCGCTTTGGAAACTTCTTCTGTAATAGTGAAAAGGAGAGGCAGCAATGTGGTGTACCTGAAGCTTGTGGATGCATGTGGGCATATTTGGCCGATTTGCGTGCTTCGAAGGGAAGTTCTCATGTGCACTATAACTACTTTTATGATCCATTGAAGCATGATGGTCCAATATTGCCTCCAGCAGCAGCTTTAGCACCAACTCTTTGGCCTCAATTCCATCTCCGATGGGCTTGTCCCTCAGAGGCTCAAGCTGGAGATGTTGAAGCTCAATTTAGGAAGATGGATATTAAATTCTCTGAACTACAGAAGGAAAAAGAAGCGGCAGAACAGAAAGCTAAAGAAATCACTGCCGTTATGGAATTGTTAAGTGCAGATTTGCAAAATGAAAAGCAAGTCAGCAGCTCAGCTATGATTTTGGCCAAGAGGGCAAGCAAGGAAAGTGAGGCCATAAAGCGAGCTATACAATCACTGGGATGCAATGTCCACTTTTCAAGCAGTGGAGATTGCACCGTCGACATTGAAAGCAGCCAAATTGAACCTCCACTGAAGTCATCTTATCCTTCAAAAAGAGAAGCAGATGGCGCTGTACAGCGTGATGATAAATCAGACCTCTCTGTTTCAATTACAGTCATGGCAGATGATGTGGTTTCCAGCAACCCAATTGATCGAGTATGCGAAACTTTATGCCCTTTACGCATGCGAGATGGAGGCTGCAGGTGGCCAGATGCTGGCTGTGCTCAGTTGGGTAGCCAATTTGTCGGACTGAAGGCCAACTACGAGGCATTTGATAAACTTTCTATTTATGATAGCTATTTCCAGCCTAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004438 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009987 GO:0009991 GO:0010035 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0023052 GO:0030258 GO:0031410 GO:0031668 GO:0031982 GO:0033554 GO:0034593 GO:0035556 GO:0042221 GO:0042578 GO:0042631 GO:0043226 GO:0043227 GO:0043229 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046486 GO:0046488 GO:0046839 GO:0046856 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0052629 GO:0052744 GO:0052866 GO:0065007 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071704 GO:0080134 GO:0097708 GO:0104004 GO:0106018 GO:1901700 GO:1901701 GO:2000070

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04070 map00562 map01100 map04070

Pfam Domains

Protein Families

Myotub-related

Protein Analysis

913

Amino Acids

100.39

Weight (kDa)

8.64

Isoelectric Point (pI)

51.4

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013401)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10550 AT5G04540
fragaria_vesca	FvH4_7g06400
malus_domestica	MD02G1244600.v1.1 MD07G1072600.v1.1
prunus_persica	Prupe.2G090700_v2.0.a1 Prupe.2G090700_v2.0.a1
pyrus_communis	pycom02g21050 pycom07g05570
rosa_chinensis	RchiOBHm_Chr1g0334491
rosa_laevigata	RLG00000029449
rosa_roxburghii	Rroxscaffold_4G00316800
rosa_rugosa	Rorug01G0114300
rosa_samantha	Rh1AG139500 Rh1BG105700 Rh1CG131400 Rh1DG143400
rosa_wichuraiana	Rw1G011500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2616
Acc36I	ACCTGC	2 cut(s)	392, 2616
Acc65I	GGTACC	1 cut(s)	404
AccB1I	GGYRCC	2 cut(s)	404, 1178
AccB7I	CCANNNNNTGG	3 cut(s)	1001, 1033, 2639
AccBSI	CCGCTC	1 cut(s)	189
AccI	GTMKAC	1 cut(s)	2424
AccII	CGCG	2 cut(s)	295, 319
AciI	CCGC	6 cut(s)	166, 187, 295, 745, 1310, 2231
AclWI	GGATC	5 cut(s)	605, 696, 1559, 1896, 2051
AcoI	YGGCCR	3 cut(s)	2001, 2328, 2630
AcsI	RAATTY	3 cut(s)	719, 862, 2201
AcuI	CTGAAG	6 cut(s)	557, 1377, 1857, 1992, 2477, 2696
AcyI	GRCGYC	2 cut(s)	209, 264
AdeI	CACNNNGTG	1 cut(s)	1094
AfaI	GTAC	6 cut(s)	324, 406, 667, 1111, 1968, 2499
AfiI	CCNNNNNNNGG	9 cut(s)	273, 306, 1001, 1033, 1037, 1284, 1285, 1713, 2639
AflIII	ACRYGT	1 cut(s)	1429
AjiI	CACGTC	2 cut(s)	61, 638
AjnI	CCWGG	2 cut(s)	939, 1881
Alw21I	GWGCWC	4 cut(s)	939, 1099, 2040, 2650
Alw26I	GTCTC	4 cut(s)	67, 628, 1144, 1336
Alw44I	GTGCAC	1 cut(s)	2036
AlwI	GGATC	5 cut(s)	605, 696, 1559, 1896, 2051
AlwNI	CAGNNNCTG	1 cut(s)	2639
Ama87I	CYCGRG	2 cut(s)	79, 1406
AoxI	GGCC	7 cut(s)	246, 2001, 2117, 2328, 2355, 2630, 2679
ApaLI	GTGCAC	1 cut(s)	2036
ApoI	RAATTY	3 cut(s)	719, 862, 2201
Asp718I	GGTACC	1 cut(s)	404
AspLEI	GCGC	2 cut(s)	178, 2495
AspS9I	GGNCC	4 cut(s)	276, 297, 710, 2075
AsuC2I	CCSGG	1 cut(s)	1279
AsuHPI	GGTGA	1 cut(s)	1722
AsuII	TTCGAA	1 cut(s)	2018
AsuNHI	GCTAGC	1 cut(s)	1618
AvaI	CYCGRG	2 cut(s)	79, 1406
AvaII	GGWCC	4 cut(s)	276, 297, 710, 2075
BaeGI	GKGCMC	1 cut(s)	2040
BalI	TGGCCA	2 cut(s)	2330, 2632
BanI	GGYRCC	2 cut(s)	404, 1178
BarI	GAAGNNNNNNTAC	4 cut(s)	1375, 1407, 2669, 2701
BbsI	GAAGAC	1 cut(s)	422
Bbv12I	GWGCWC	4 cut(s)	939, 1099, 2040, 2650
BceAI	ACGGC	1 cut(s)	2246
BcgI	CGANNNNNNTGC	2 cut(s)	1994, 2028
BciT130I	CCWGG	2 cut(s)	941, 1883
BciVI	GTATCC	2 cut(s)	1730, 1860
BcnI	CCSGG	1 cut(s)	1279
BcoDI	GTCTC	4 cut(s)	67, 628, 1144, 1336
BfaI	CTAG	2 cut(s)	453, 1619
BfmI	CTRYAG	4 cut(s)	975, 1811, 2213, 2623
BfoI	RGCGCY	2 cut(s)	179, 2496
BfuAI	ACCTGC	2 cut(s)	392, 2616
BfuI	GTATCC	2 cut(s)	1730, 1860
BglI	GCCNNNNNGGC	1 cut(s)	2336
BlpI	GCTNAGC	1 cut(s)	2314
Bme1390I	CCNGG	3 cut(s)	941, 1279, 1883
Bme18I	GGWCC	4 cut(s)	276, 297, 710, 2075
BmeT110I	CYCGRG	2 cut(s)	79, 1406
BmgBI	CACGTC	2 cut(s)	61, 638
BmgT120I	GGNCC	4 cut(s)	276, 297, 710, 2075
BmiI	GGNNCC	3 cut(s)	406, 784, 1180
BmrFI	CCNGG	3 cut(s)	941, 1279, 1883
BmrI	ACTGGG	2 cut(s)	1722, 2390
BmsI	GCATC	7 cut(s)	803, 1135, 1499, 1760, 1973, 2375, 2626
BmtI	GCTAGC	1 cut(s)	1622
BmuI	ACTGGG	2 cut(s)	1722, 2390
BpiI	GAAGAC	1 cut(s)	422
BpmI	CTGGAG	4 cut(s)	923, 1023, 2073, 2184
Bpu10I	CCTNAGC	3 cut(s)	196, 1283, 1376
Bpu1102I	GCTNAGC	1 cut(s)	2314
Bpu14I	TTCGAA	1 cut(s)	2018
BpuEI	CTTGAG	4 cut(s)	175, 460, 1360, 2142
BpuMI	CCSGG	1 cut(s)	1279
Bsa29I	ATCGAT	1 cut(s)	797
BsaAI	YACGTR	2 cut(s)	791, 984
BsaHI	GRCGYC	2 cut(s)	209, 264
BsaI	GGTCTC	1 cut(s)	1144
BsaJI	CCNNGG	3 cut(s)	1032, 1182, 1697
BsaXI	ACNNNNNCTCC	2 cut(s)	838, 868
Bsc4I	CCNNNNNNNGG	9 cut(s)	273, 306, 1001, 1033, 1037, 1284, 1285, 1713, 2639
Bse118I	RCCGGY	1 cut(s)	286
Bse1I	ACTGG	7 cut(s)	256, 278, 1006, 1111, 1717, 1723, 2385
Bse3DI	GCAATG	3 cut(s)	1266, 1964, 2395
BseBI	CCWGG	2 cut(s)	941, 1883
BseCI	ATCGAT	1 cut(s)	797
BseDI	CCNNGG	3 cut(s)	1032, 1182, 1697
BseGI	GGATG	9 cut(s)	820, 991, 1327, 1332, 1358, 1523, 1630, 1988, 2390
BseLI	CCNNNNNNNGG	9 cut(s)	273, 306, 1001, 1033, 1037, 1284, 1285, 1713, 2639
BseMI	GCAATG	3 cut(s)	1266, 1964, 2395
BseMII	CTCAG	8 cut(s)	210, 229, 1188, 1215, 1547, 2163, 2328, 2663
BseNI	ACTGG	7 cut(s)	256, 278, 1006, 1111, 1717, 1723, 2385
BseSI	GKGCMC	1 cut(s)	2040
BseYI	CCCAGC	1 cut(s)	258
BsgI	GTGCAG	3 cut(s)	660, 1071, 2301
Bsh1236I	CGCG	2 cut(s)	295, 319
Bsh1285I	CGRYCG	2 cut(s)	206, 311
BshFI	GGCC	7 cut(s)	248, 2003, 2119, 2330, 2357, 2632, 2681
BshNI	GGYRCC	2 cut(s)	404, 1178
BshVI	ATCGAT	1 cut(s)	797
BsiEI	CGRYCG	2 cut(s)	206, 311
BsiHKAI	GWGCWC	4 cut(s)	939, 1099, 2040, 2650
BsiHKCI	CYCGRG	2 cut(s)	79, 1406
BsiSI	CCGG	2 cut(s)	287, 1279
BslFI	GGGAC	6 cut(s)	233, 275, 1301, 1424, 1535, 2130
BslI	CCNNNNNNNGG	9 cut(s)	273, 306, 1001, 1033, 1037, 1284, 1285, 1713, 2639
BsmAI	GTCTC	4 cut(s)	67, 628, 1144, 1336
BsmBI	CGTCTC	2 cut(s)	67, 628
BsmFI	GGGAC	6 cut(s)	233, 275, 1301, 1424, 1535, 2130
BsnI	GGCC	7 cut(s)	248, 2003, 2119, 2330, 2357, 2632, 2681
Bso31I	GGTCTC	1 cut(s)	1144
BsoBI	CYCGRG	2 cut(s)	79, 1406
Bsp119I	TTCGAA	1 cut(s)	2018
Bsp1286I	GDGCHC	4 cut(s)	939, 1099, 2040, 2650
Bsp1407I	TGTACA	3 cut(s)	322, 665, 2497
Bsp143I	GATC	8 cut(s)	203, 597, 688, 1564, 1642, 1888, 2056, 2575
Bsp1720I	GCTNAGC	1 cut(s)	2314
Bsp19I	CCATGG	1 cut(s)	1182
BspACI	CCGC	6 cut(s)	166, 187, 295, 745, 1310, 2231
BspANI	GGCC	7 cut(s)	248, 2003, 2119, 2330, 2357, 2632, 2681
BspCNI	CTCAG	8 cut(s)	209, 228, 1189, 1216, 1546, 2162, 2327, 2662
BspDI	ATCGAT	1 cut(s)	797
BspFNI	CGCG	2 cut(s)	295, 319
BspHI	TCATGA	1 cut(s)	1044
BspLI	GGNNCC	3 cut(s)	406, 784, 1180
BspMAI	CTGCAG	2 cut(s)	1815, 2627
BspMI	ACCTGC	2 cut(s)	392, 2616
BspOI	GCTAGC	1 cut(s)	1622
BspPI	GGATC	5 cut(s)	605, 696, 1559, 1896, 2051
BspT104I	TTCGAA	1 cut(s)	2018
BspT107I	GGYRCC	2 cut(s)	404, 1178
BspTNI	GGTCTC	1 cut(s)	1144
BsrBI	CCGCTC	1 cut(s)	189
BsrDI	GCAATG	3 cut(s)	1266, 1964, 2395
BsrFI	RCCGGY	1 cut(s)	286
BsrGI	TGTACA	3 cut(s)	322, 665, 2497
BsrI	ACTGG	7 cut(s)	256, 278, 1006, 1111, 1717, 1723, 2385
BssAI	RCCGGY	1 cut(s)	286
BssECI	CCNNGG	3 cut(s)	1032, 1182, 1697
BssMI	GATC	8 cut(s)	203, 597, 688, 1564, 1642, 1888, 2056, 2575
BssNI	GRCGYC	2 cut(s)	209, 264
BssT1I	CCWWGG	3 cut(s)	1032, 1182, 1697
Bst2UI	CCWGG	2 cut(s)	941, 1883
Bst4CI	ACNGT	8 cut(s)	154, 1349, 1415, 1582, 1663, 1901, 2422, 2539
Bst6I	CTCTTC	3 cut(s)	127, 229, 1876
BstACI	GRCGYC	2 cut(s)	209, 264
BstAPI	GCANNNNNTGC	2 cut(s)	1013, 1094
BstAUI	TGTACA	3 cut(s)	322, 665, 2497
BstBAI	YACGTR	2 cut(s)	791, 984
BstBI	TTCGAA	1 cut(s)	2018
BstDSI	CCRYGG	1 cut(s)	1182
BstF5I	GGATG	9 cut(s)	820, 991, 1327, 1332, 1358, 1523, 1630, 1988, 2390
BstFNI	CGCG	2 cut(s)	295, 319
BstH2I	RGCGCY	2 cut(s)	179, 2496
BstHHI	GCGC	2 cut(s)	178, 2495
BstKTI	GATC	8 cut(s)	206, 600, 691, 1567, 1645, 1891, 2059, 2578
BstMAI	GTCTC	4 cut(s)	67, 628, 1144, 1336
BstMBI	GATC	8 cut(s)	203, 597, 688, 1564, 1642, 1888, 2056, 2575
BstMCI	CGRYCG	2 cut(s)	206, 311
BstNI	CCWGG	2 cut(s)	941, 1883
BstNSI	RCATGY	4 cut(s)	1433, 1657, 1990, 2611
BstSCI	CCNGG	3 cut(s)	939, 1277, 1881
BstSFI	CTRYAG	4 cut(s)	975, 1811, 2213, 2623
BstSLI	GKGCMC	1 cut(s)	2040
BstUI	CGCG	2 cut(s)	295, 319
BstV2I	GAAGAC	1 cut(s)	422
BstX2I	RGATCY	2 cut(s)	688, 1888
BstXI	CCANNNNNNTGG	1 cut(s)	2115
BstYI	RGATCY	2 cut(s)	688, 1888
Bsu15I	ATCGAT	1 cut(s)	797
BsuI	GTATCC	2 cut(s)	1730, 1860
BsuRI	GGCC	7 cut(s)	248, 2003, 2119, 2330, 2357, 2632, 2681
BsuTUI	ATCGAT	1 cut(s)	797
BtgI	CCRYGG	1 cut(s)	1182
BtrI	CACGTC	2 cut(s)	61, 638
BtsCI	GGATG	9 cut(s)	820, 991, 1327, 1332, 1358, 1523, 1630, 1988, 2390
BtsI	GCAGTG	3 cut(s)	1820, 2256, 2413
BtsIMutI	CAGTG	9 cut(s)	249, 1401, 1420, 1500, 1820, 2256, 2378, 2413, 2453
BveI	ACCTGC	2 cut(s)	392, 2616
CaiI	CAGNNNCTG	1 cut(s)	2639
CciI	TCATGA	1 cut(s)	1044
CfoI	GCGC	2 cut(s)	178, 2495
Cfr10I	RCCGGY	1 cut(s)	286
Cfr13I	GGNCC	4 cut(s)	276, 297, 710, 2075
ClaI	ATCGAT	1 cut(s)	797
CpoI	CGGWCCG	1 cut(s)	297
CseI	GACGC	3 cut(s)	217, 272, 1727
Csp6I	GTAC	6 cut(s)	323, 405, 666, 1110, 1967, 2498
CspI	CGGWCCG	1 cut(s)	297
CviQI	GTAC	6 cut(s)	323, 405, 666, 1110, 1967, 2498
DpnI	GATC	8 cut(s)	205, 599, 690, 1566, 1644, 1890, 2058, 2577
DpnII	GATC	8 cut(s)	203, 597, 688, 1564, 1642, 1888, 2056, 2575
DraIII	CACNNNGTG	1 cut(s)	1094
EaeI	YGGCCR	3 cut(s)	2001, 2328, 2630
Eam1104I	CTCTTC	3 cut(s)	127, 229, 1876
EarI	CTCTTC	3 cut(s)	127, 229, 1876
Eco130I	CCWWGG	3 cut(s)	1032, 1182, 1697
Eco31I	GGTCTC	1 cut(s)	1144
Eco47I	GGWCC	4 cut(s)	276, 297, 710, 2075
Eco57I	CTGAAG	6 cut(s)	557, 1377, 1857, 1992, 2477, 2696
Eco88I	CYCGRG	2 cut(s)	79, 1406
EcoRII	CCWGG	2 cut(s)	939, 1881
EcoT14I	CCWWGG	3 cut(s)	1032, 1182, 1697
EcoT22I	ATGCAT	1 cut(s)	1988
ErhI	CCWWGG	3 cut(s)	1032, 1182, 1697
Esp3I	CGTCTC	2 cut(s)	67, 628
FaqI	GGGAC	6 cut(s)	233, 275, 1301, 1424, 1535, 2130
FauI	CCCGC	1 cut(s)	194
FblI	GTMKAC	1 cut(s)	2424
FokI	GGATG	9 cut(s)	827, 978, 1334, 1339, 1365, 1530, 1617, 1995, 2397
FspBI	CTAG	2 cut(s)	453, 1619
GlaI	GCGC	2 cut(s)	177, 2494
GsaI	CCCAGC	1 cut(s)	262
GsuI	CTGGAG	4 cut(s)	923, 1023, 2073, 2184
HaeII	RGCGCY	2 cut(s)	179, 2496
HaeIII	GGCC	7 cut(s)	248, 2003, 2119, 2330, 2357, 2632, 2681
HapII	CCGG	2 cut(s)	287, 1279
HgaI	GACGC	3 cut(s)	217, 272, 1727
HhaI	GCGC	2 cut(s)	178, 2495
Hin1I	GRCGYC	2 cut(s)	209, 264
Hin6I	GCGC	2 cut(s)	176, 2493
HinP1I	GCGC	2 cut(s)	176, 2493
HincII	GTYRAC	3 cut(s)	1401, 1659, 2425
HindII	GTYRAC	3 cut(s)	1401, 1659, 2425
HindIII	AAGCTT	1 cut(s)	1974
HinfI	GANTC	7 cut(s)	221, 230, 523, 553, 679, 1199, 1484
HpaII	CCGG	2 cut(s)	287, 1279
HphI	GGTGA	1 cut(s)	1722
Hpy188III	TCNNGA	6 cut(s)	79, 439, 708, 1045, 1339, 1895
Hpy99I	CGWCG	3 cut(s)	49, 211, 2426
HpyAV	CCTTC	5 cut(s)	723, 2014, 2212, 2481, 2671
HpyCH4III	ACNGT	8 cut(s)	154, 1349, 1415, 1582, 1663, 1901, 2422, 2539
HpyCH4IV	ACGT	5 cut(s)	60, 637, 790, 983, 1018
HpySE526I	ACGT	5 cut(s)	60, 637, 790, 983, 1018
Hsp92I	GRCGYC	2 cut(s)	209, 264
HspAI	GCGC	2 cut(s)	176, 2493
KpnI	GGTACC	1 cut(s)	408
Kzo9I	GATC	8 cut(s)	203, 597, 688, 1564, 1642, 1888, 2056, 2575
LmnI	GCTCC	3 cut(s)	788, 942, 1004
LweI	GCATC	7 cut(s)	803, 1135, 1499, 1760, 1973, 2375, 2626
MaeI	CTAG	2 cut(s)	453, 1619
MaeII	ACGT	5 cut(s)	60, 637, 790, 983, 1018
MaeIII	GTNAC	5 cut(s)	415, 747, 979, 1582, 1663
MalI	GATC	8 cut(s)	205, 599, 690, 1566, 1644, 1890, 2058, 2577
MbiI	CCGCTC	1 cut(s)	189
MboI	GATC	8 cut(s)	203, 597, 688, 1564, 1642, 1888, 2056, 2575
MfeI	CAATTG	4 cut(s)	326, 492, 1835, 2571
MflI	RGATCY	2 cut(s)	688, 1888
MhlI	GDGCHC	4 cut(s)	939, 1099, 2040, 2650
MlsI	TGGCCA	2 cut(s)	2330, 2632
MluNI	TGGCCA	2 cut(s)	2330, 2632
MlyI	GAGTC	6 cut(s)	215, 239, 547, 688, 1208, 1493
MmeI	TCCRAC	2 cut(s)	124, 2650
Mox20I	TGGCCA	2 cut(s)	2330, 2632
Mph1103I	ATGCAT	1 cut(s)	1988
MscI	TGGCCA	2 cut(s)	2330, 2632
MseI	TTAA	5 cut(s)	648, 659, 1424, 2199, 2276
MslI	CAYNNNNRTG	2 cut(s)	1509, 2383
Msp20I	TGGCCA	2 cut(s)	2330, 2632
MspA1I	CMGCKG	1 cut(s)	1537
MspI	CCGG	2 cut(s)	287, 1279
MspR9I	CCNGG	3 cut(s)	941, 1279, 1883
MunI	CAATTG	4 cut(s)	326, 492, 1835, 2571
MvaI	CCWGG	2 cut(s)	941, 1883
MvnI	CGCG	2 cut(s)	295, 319
NciI	CCSGG	1 cut(s)	1279
NcoI	CCATGG	1 cut(s)	1182
NdeII	GATC	8 cut(s)	203, 597, 688, 1564, 1642, 1888, 2056, 2575
NheI	GCTAGC	1 cut(s)	1618
NlaIV	GGNNCC	3 cut(s)	406, 784, 1180
NmuCI	GTSAC	2 cut(s)	415, 1582
NsiI	ATGCAT	1 cut(s)	1988
NspI	RCATGY	4 cut(s)	1433, 1657, 1990, 2611
NspV	TTCGAA	1 cut(s)	2018
PaeI	GCATGC	1 cut(s)	2611
PaeR7I	CTCGAG	1 cut(s)	79
PagI	TCATGA	1 cut(s)	1044
PaqCI	CACCTGC	1 cut(s)	2616
PciI	ACATGT	1 cut(s)	1429
PfeI	GAWTC	1 cut(s)	523
PflMI	CCANNNNNTGG	3 cut(s)	1001, 1033, 2639
Ple19I	CGATCG	1 cut(s)	206
PleI	GAGTC	6 cut(s)	215, 238, 547, 687, 1207, 1492
PpsI	GAGTC	6 cut(s)	215, 238, 547, 687, 1207, 1492
Ppu21I	YACGTR	2 cut(s)	791, 984
PscI	ACATGT	1 cut(s)	1429
Psp6I	CCWGG	2 cut(s)	939, 1881
PspFI	CCCAGC	1 cut(s)	258
PspGI	CCWGG	2 cut(s)	939, 1881
PspN4I	GGNNCC	3 cut(s)	406, 784, 1180
PspPI	GGNCC	4 cut(s)	276, 297, 710, 2075
PstI	CTGCAG	2 cut(s)	1815, 2627
PstNI	CAGNNNCTG	1 cut(s)	2639
PsuI	RGATCY	2 cut(s)	688, 1888
PvuI	CGATCG	1 cut(s)	206
PvuII	CAGCTG	1 cut(s)	1537
RsaI	GTAC	6 cut(s)	324, 406, 667, 1111, 1968, 2499
RsaNI	GTAC	6 cut(s)	323, 405, 666, 1110, 1967, 2498
RseI	CAYNNNNRTG	2 cut(s)	1509, 2383
Rsr2I	CGGWCCG	1 cut(s)	297
RsrII	CGGWCCG	1 cut(s)	297
SalI	GTCGAC	1 cut(s)	2423
SaqAI	TTAA	5 cut(s)	648, 659, 1424, 2199, 2276
Sau3AI	GATC	8 cut(s)	203, 597, 688, 1564, 1642, 1888, 2056, 2575
Sau96I	GGNCC	4 cut(s)	276, 297, 710, 2075
SchI	GAGTC	6 cut(s)	215, 239, 547, 688, 1208, 1493
ScrFI	CCNGG	3 cut(s)	941, 1279, 1883
SduI	GDGCHC	4 cut(s)	939, 1099, 2040, 2650
SfaNI	GCATC	7 cut(s)	803, 1135, 1499, 1760, 1973, 2375, 2626
SfcI	CTRYAG	4 cut(s)	975, 1811, 2213, 2623
Sfr274I	CTCGAG	1 cut(s)	79
SfuI	TTCGAA	1 cut(s)	2018
SinI	GGWCC	4 cut(s)	276, 297, 710, 2075
SlaI	CTCGAG	1 cut(s)	79
SmiMI	CAYNNNNRTG	2 cut(s)	1509, 2383
SmlI	CTYRAG	5 cut(s)	79, 190, 439, 1339, 2157
SmoI	CTYRAG	5 cut(s)	79, 190, 439, 1339, 2157
SphI	GCATGC	1 cut(s)	2611
SsiI	CCGC	6 cut(s)	166, 187, 295, 745, 1310, 2231
SspI	AATATT	1 cut(s)	2082
SspMI	CTAG	2 cut(s)	453, 1619
StyD4I	CCNGG	3 cut(s)	939, 1277, 1881
StyI	CCWWGG	3 cut(s)	1032, 1182, 1697
TaaI	ACNGT	8 cut(s)	154, 1349, 1415, 1582, 1663, 1901, 2422, 2539
TaiI	ACGT	5 cut(s)	63, 640, 793, 986, 1021
TaqII	GACCGA	1 cut(s)	297
TatI	WGTACW	3 cut(s)	322, 665, 2497
TauI	GCSGC	3 cut(s)	168, 1313, 2234
TfiI	GAWTC	1 cut(s)	523
Tru1I	TTAA	5 cut(s)	648, 659, 1424, 2199, 2276
Tru9I	TTAA	5 cut(s)	648, 659, 1424, 2199, 2276
TscAI	CASTG	9 cut(s)	256, 1401, 1420, 1500, 1820, 2263, 2385, 2413, 2460
TseFI	GTSAC	2 cut(s)	415, 1582
Tsp45I	GTSAC	2 cut(s)	415, 1582
TspDTI	ATGAA	7 cut(s)	810, 815, 945, 1064, 1086, 1305, 2310
TspGWI	ACGGA	3 cut(s)	289, 944, 1138
TspRI	CASTG	9 cut(s)	256, 1401, 1420, 1500, 1820, 2263, 2385, 2413, 2460
Van91I	CCANNNNNTGG	3 cut(s)	1001, 1033, 2639
VneI	GTGCAC	1 cut(s)	2036
VpaK11BI	GGWCC	4 cut(s)	276, 297, 710, 2075
XapI	RAATTY	3 cut(s)	719, 862, 2201
XceI	RCATGY	4 cut(s)	1433, 1657, 1990, 2611
XcmI	CCANNNNNNNNNTGG	2 cut(s)	681, 1034
XhoI	CTCGAG	1 cut(s)	79
XmiI	GTMKAC	1 cut(s)	2424
XspI	CTAG	2 cut(s)	453, 1619
Zsp2I	ATGCAT	1 cut(s)	1988

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.