Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0013401

Physical Location & Seq

Genomic Coordinates Reverse (-)

18470425 .. 18490674

Gene Structure 20250 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG105700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2280 bp

ATGGAATCAACGCCGAGGCCAAGCTCCGGCCGATCAACGCCGCTCCGGGACTCCAATGACTCCGACAAGATGGAGGCCACTGGTCTCTGGGACGCCCTCGAATGGACCTTTGAGCCGGTCTCACGCTCCGTTCCACTCGCCGTTTCGCATTTGAAGTTGGATTGCTTGCTTGAAGGTGAGCAAGTTGAAGTTGAGGGGTATGGCGTTGTTCTTATTAATACTGATGAGGCAGGTACCTTGATAGTCACCAATTTTCGTCTTCTTTTTCTGAGTGAGGGAACTAGGAATGTTATTCCGCTTGGCACGATACCTTTGGCAACAATTGAGAAGTTCAACAAAATTGTTGTAAAGAATCAATCAACCCCTCGTCAATATGACAAGACTCCATCAAGAAGATTGCTTCAGGTCATTGGTAAAGACATGAGGATAATAGTCTTTGGGTTTCGCCCTAAAACAAGGCAGAGACATGCAGTGTTTGATGCATTATTAAAGTGTACAAAGCCAGCGAGCCTATGGGATCTTTTTTCTTTTGTTTCTGGACCTTCCAAATATAGTAACACTAATCCAAAGGTGCGGTTACTGAATGAGTATTTTCGGCTTCTTGGAAAAGGCTCCCGTGCGTCTATGAATATGATTGAAGATGGGTCATTCACTTTGTCAAATGATTTGTGGAGAATAAGTAGTGTAAATTCTAGCTATTCATTGTGCCAGAGTTATCCATTTGCCTTGATTGTTCCGAAATCCATTACTGATGAAGAAGTGCTCCAAGCTTCCAGCTTCCGTGCAAGATGTCGGTTGCCTGTAGTTACATGGTGTCATCCAAGAACAGGAGCAGTTCTGGCACGTTCATCCCAACCCTTAGTTGGTATCATGATGAACATGAGGAGCAACACAGATGAAAAGCTCGTTGCTGCCCTTTGCTCTGAACTTACTGGTAGTGGTGGTAAAAGAAGGAAGCTATATATAGCAGATGCAAGACCACGAAAAAATGCTTTAGCTAATGGTGCAATGGGAGGTGGTTCTGAGTCATCTTCAAATTACCTTCAGTCTGAGATTGTTTTCTTTGGGATAGACAACATCCATGCGATGAGAGATAGTTTTGCTCGGCTCAGAGATTACTTAGATACTTATGGTACAGCTTCATCGGATGGAATGTCATCTTTCTTGAGGGATGGTGGGTGGAGTTGGGGTGGAGGCAACCTTAGCAGTATGTCTGCTTCGGTGTCAACTCTTGGAGACAGTGGTTGGTTTAAACATGTTCAAAGTGTGTTAGCTGGTTCAGCTTGGATTGCTGCACGCGTTGCTCTGGAATCGGCATCGGTGCTTGTACATTGCAGTGATGGATGGGATAGAACTACTCAGCTGGTTTCGCTTGCCATTTTGTTGCTTGATCCATACTATCGGACTTTAAATGGGTTCCAGGCACTCGTTGAGAAAGATTGGCTAGCATTTGGTCACCCATTTGCAGATCGAGTTGGCATGCCAACTGTAACCGGAAGTACAAGCATACCTTCTGAGTTACCAAGGCAGTCTTCTACTGGGAGTATCCAATCATCACCCAATCGCCAGTCAGGAGCATCCTTCACATCTCAAGCTCCTACATCTCACGCACAGACTTCAAACAACTATTCTCCCATATTTCTGCAGTGGGTAGATTGTGTTTCACAGCTATTGCGGATGTATCCTTTTGCTTTTGAGTTCTCTTCGGTTTTCCTGGTGGATCTATTGGATTGTGTTCTATCCTGCCGCTTTGGAAACTTCTTTTGTAATAGTGAAAAGGAGAGGCAACAGTGTGGGGTACCCGAAGCTTGTGGATGCATGTGGGCATATTTGGCTGATTTGCGCTCTTTAGATGGAAATTCTCATGTGCACTATAATTATTTCTATGATCCACTGAAACACAATGGTCCGCTATTACCTCCAGCAGCTGCTTTAGCACCAACTCTATGGCCACAATTCCATTTGCGATGGGCTTGTCCCTCAGAGGCTCAAGCTGGAGAGCTAGAAGCTCAATTTAGGAAGATGGATGTTAAATTCGTGGAACTGCAGAAGGCAAAGGAAGTGGCAGAAAGGAAAGCTAAAGAAATCACTACTCTCATGGAAACCTTAAGTGCAGATGTAAGACATGAAAAGCGAGTCAGCAGCTCGGCTATGAAGTTGGTCAAGAGGGCAAACAAGGAGAGTGAGGCCATGAAGCGAGCTATACAGTCACTGGGGTGCAAGGGAAATGAAGCCAGAGGTCAAAAGGATCGCAGCAAACTGAAATTACTGAAAACGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004438 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009987 GO:0009991 GO:0010035 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0023052 GO:0030258 GO:0031410 GO:0031668 GO:0031982 GO:0033554 GO:0034593 GO:0035556 GO:0042221 GO:0042578 GO:0042631 GO:0043226 GO:0043227 GO:0043229 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046486 GO:0046488 GO:0046839 GO:0046856 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0052629 GO:0052744 GO:0052866 GO:0065007 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071704 GO:0080134 GO:0097708 GO:0104004 GO:0106018 GO:1901700 GO:1901701 GO:2000070

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04070 map00562 map01100 map04070

Pfam Domains

Protein Families

Myotub-related

Protein Analysis

759

Amino Acids

84.1

Weight (kDa)

8.99

Isoelectric Point (pI)

48.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myotub-related	PF06602	218 - 596	4.9e-125	Myotubularin-like phosphatase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0013401)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10550 AT5G04540
fragaria_vesca	FvH4_7g06400
malus_domestica	MD02G1244600.v1.1 MD07G1072600.v1.1
prunus_persica	Prupe.2G090700_v2.0.a1 Prupe.2G090700_v2.0.a1
pyrus_communis	pycom02g21050 pycom07g05570
rosa_chinensis	RchiOBHm_Chr1g0334491
rosa_laevigata	RLG00000029449
rosa_roxburghii	Rroxscaffold_4G00316800
rosa_rugosa	Rorug01G0114300
rosa_samantha	Rh1AG139500 Rh1BG105700 Rh1CG131400 Rh1DG143400
rosa_wichuraiana	Rw1G011500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	221
Acc65I	GGTACC	2 cut(s)	233, 1798
AccB1I	GGYRCC	2 cut(s)	233, 1798
AccBSI	CCGCTC	1 cut(s)	43
AccII	CGCG	1 cut(s)	1299
AciI	CCGC	6 cut(s)	41, 296, 574, 1675, 1747, 1910
AclWI	GGATC	5 cut(s)	525, 1385, 1728, 1883, 2256
AcoI	YGGCCR	2 cut(s)	28, 1949
AcsI	RAATTY	3 cut(s)	688, 1858, 2033
AcuI	CTGAAG	2 cut(s)	386, 1028
AcyI	GRCGYC	1 cut(s)	93
AfaI	GTAC	6 cut(s)	235, 496, 1135, 1329, 1501, 1800
AfiI	CCNNNNNNNGG	4 cut(s)	26, 102, 827, 863
AflII	CTTAAG	1 cut(s)	2107
AflIII	ACRYGT	2 cut(s)	1255, 1297
AgsI	TTSAA	8 cut(s)	154, 173, 188, 334, 638, 1035, 1262, 1620
AjnI	CCWGG	2 cut(s)	1419, 1713
AjuI	GAANNNNNNNTTGG	2 cut(s)	1516, 1548
AleI	CACNNNNGTG	1 cut(s)	2215
Alw21I	GWGCWC	2 cut(s)	765, 1872
Alw26I	GTCTC	4 cut(s)	89, 124, 457, 1230
Alw44I	GTGCAC	1 cut(s)	1868
AlwI	GGATC	5 cut(s)	525, 1385, 1728, 1883, 2256
AlwNI	CAGNNNCTG	2 cut(s)	1928, 2212
AoxI	GGCC	5 cut(s)	17, 28, 75, 1949, 2187
ApaLI	GTGCAC	1 cut(s)	1868
ApeKI	GCWGC	6 cut(s)	911, 1292, 1925, 1928, 2142, 2253
ApoI	RAATTY	3 cut(s)	688, 1858, 2033
AseI	ATTAAT	1 cut(s)	216
Asp718I	GGTACC	2 cut(s)	233, 1798
AspLEI	GCGC	1 cut(s)	1845
AspS9I	GGNCC	3 cut(s)	105, 539, 1907
AsuC2I	CCSGG	1 cut(s)	47
AsuHPI	GGTGA	4 cut(s)	188, 238, 1448, 1548
AsuNHI	GCTAGC	1 cut(s)	1444
AvaII	GGWCC	3 cut(s)	105, 539, 1907
BaeGI	GKGCMC	1 cut(s)	1872
BalI	TGGCCA	1 cut(s)	1951
BanI	GGYRCC	2 cut(s)	233, 1798
BarI	GAAGNNNNNNTAC	2 cut(s)	1201, 1233
BbsI	GAAGAC	2 cut(s)	251, 1524
Bbv12I	GWGCWC	2 cut(s)	765, 1872
BbvI	GCAGC	6 cut(s)	898, 1279, 1915, 1937, 2154, 2265
BceAI	ACGGC	1 cut(s)	125
BciT130I	CCWGG	2 cut(s)	1421, 1715
BciVI	GTATCC	2 cut(s)	1556, 1692
BcnI	CCSGG	1 cut(s)	47
BcoDI	GTCTC	4 cut(s)	89, 124, 457, 1230
BfaI	CTAG	4 cut(s)	282, 693, 1445, 2003
BfmI	CTRYAG	3 cut(s)	801, 1643, 2045
BfrI	CTTAAG	1 cut(s)	2107
BfuAI	ACCTGC	1 cut(s)	221
BfuI	GTATCC	2 cut(s)	1556, 1692
BisI	GCNGC	8 cut(s)	41, 912, 1293, 1747, 1926, 1929, 2143, 2254
BlsI	GCNGC	8 cut(s)	42, 913, 1294, 1748, 1927, 1930, 2144, 2255
Bme1390I	CCNGG	3 cut(s)	47, 1421, 1715
Bme18I	GGWCC	3 cut(s)	105, 539, 1907
BmgT120I	GGNCC	3 cut(s)	105, 539, 1907
BmiI	GGNNCC	4 cut(s)	235, 613, 1418, 1800
BmrFI	CCNGG	3 cut(s)	47, 1421, 1715
BmrI	ACTGGG	2 cut(s)	1548, 2222
BmsI	GCATC	5 cut(s)	469, 961, 1325, 1586, 1805
BmtI	GCTAGC	1 cut(s)	1448
BmuI	ACTGGG	2 cut(s)	1548, 2222
BpiI	GAAGAC	2 cut(s)	251, 1524
BplI	GAGNNNNNCTC	2 cut(s)	104, 136
BpmI	CTGGAG	2 cut(s)	1905, 2016
Bpu10I	CCTNAGC	1 cut(s)	1202
BpuEI	CTTGAG	3 cut(s)	1186, 1575, 1974
BpuMI	CCSGG	1 cut(s)	47
BsaHI	GRCGYC	1 cut(s)	93
BsaI	GGTCTC	2 cut(s)	89, 124
BsaJI	CCNNGG	2 cut(s)	14, 1523
BsaWI	WCCGGW	1 cut(s)	1493
BsaXI	ACNNNNNCTCC	4 cut(s)	664, 694, 1174, 1204
Bsc4I	CCNNNNNNNGG	4 cut(s)	26, 102, 827, 863
Bse118I	RCCGGY	1 cut(s)	115
Bse1I	ACTGG	5 cut(s)	85, 937, 1543, 1567, 2217
Bse3DI	GCAATG	2 cut(s)	1014, 1330
BseBI	CCWGG	2 cut(s)	1421, 1715
BseDI	CCNNGG	2 cut(s)	14, 1523
BseLI	CCNNNNNNNGG	4 cut(s)	26, 102, 827, 863
BseMI	GCAATG	2 cut(s)	1014, 1330
BseMII	CTCAG	7 cut(s)	260, 1014, 1041, 1123, 1373, 1506, 1995
BseNI	ACTGG	5 cut(s)	85, 937, 1543, 1567, 2217
BseRI	GAGGAG	1 cut(s)	898
BseSI	GKGCMC	1 cut(s)	1872
BseX3I	CGGCCG	1 cut(s)	28
BseXI	GCAGC	6 cut(s)	898, 1279, 1915, 1937, 2154, 2265
BsgI	GTGCAG	2 cut(s)	1278, 2133
Bsh1236I	CGCG	1 cut(s)	1299
Bsh1285I	CGRYCG	1 cut(s)	31
BshFI	GGCC	5 cut(s)	19, 30, 77, 1951, 2189
BshNI	GGYRCC	2 cut(s)	233, 1798
BsiEI	CGRYCG	1 cut(s)	31
BsiHKAI	GWGCWC	2 cut(s)	765, 1872
BsiSI	CCGG	4 cut(s)	27, 46, 116, 1494
BslFI	GGGAC	3 cut(s)	62, 104, 1962
BslI	CCNNNNNNNGG	4 cut(s)	26, 102, 827, 863
BsmAI	GTCTC	4 cut(s)	89, 124, 457, 1230
BsmFI	GGGAC	3 cut(s)	62, 104, 1962
BsnI	GGCC	5 cut(s)	19, 30, 77, 1951, 2189
Bso31I	GGTCTC	2 cut(s)	89, 124
Bsp1286I	GDGCHC	2 cut(s)	765, 1872
Bsp1407I	TGTACA	2 cut(s)	494, 1327
Bsp143I	GATC	7 cut(s)	32, 517, 1390, 1468, 1720, 1888, 2248
BspACI	CCGC	6 cut(s)	41, 296, 574, 1675, 1747, 1910
BspANI	GGCC	5 cut(s)	19, 30, 77, 1951, 2189
BspCNI	CTCAG	7 cut(s)	261, 1015, 1042, 1122, 1372, 1507, 1994
BspFNI	CGCG	1 cut(s)	1299
BspHI	TCATGA	1 cut(s)	870
BspLI	GGNNCC	4 cut(s)	235, 613, 1418, 1800
BspMAI	CTGCAG	2 cut(s)	1647, 2049
BspMI	ACCTGC	1 cut(s)	221
BspOI	GCTAGC	1 cut(s)	1448
BspPI	GGATC	5 cut(s)	525, 1385, 1728, 1883, 2256
BspT107I	GGYRCC	2 cut(s)	233, 1798
BspTI	CTTAAG	1 cut(s)	2107
BspTNI	GGTCTC	2 cut(s)	89, 124
BsrBI	CCGCTC	1 cut(s)	43
BsrDI	GCAATG	2 cut(s)	1014, 1330
BsrFI	RCCGGY	1 cut(s)	115
BsrGI	TGTACA	2 cut(s)	494, 1327
BsrI	ACTGG	5 cut(s)	85, 937, 1543, 1567, 2217
BssAI	RCCGGY	1 cut(s)	115
BssECI	CCNNGG	2 cut(s)	14, 1523
BssMI	GATC	7 cut(s)	32, 517, 1390, 1468, 1720, 1888, 2248
BssNI	GRCGYC	1 cut(s)	93
BssT1I	CCWWGG	1 cut(s)	1523
Bst2UI	CCWGG	2 cut(s)	1421, 1715
Bst4CI	ACNGT	4 cut(s)	1241, 1489, 1791, 2208
Bst6I	CTCTTC	1 cut(s)	1708
BstACI	GRCGYC	1 cut(s)	93
BstAFI	CTTAAG	1 cut(s)	2107
BstAPI	GCANNNNNTGC	1 cut(s)	1301
BstAUI	TGTACA	2 cut(s)	494, 1327
BstC8I	GCNNGC	8 cut(s)	167, 504, 508, 1297, 1374, 1446, 1481, 2199
BstEII	GGTNACC	1 cut(s)	1454
BstFNI	CGCG	1 cut(s)	1299
BstHHI	GCGC	1 cut(s)	1845
BstKTI	GATC	7 cut(s)	35, 520, 1393, 1471, 1723, 1891, 2251
BstMAI	GTCTC	4 cut(s)	89, 124, 457, 1230
BstMBI	GATC	7 cut(s)	32, 517, 1390, 1468, 1720, 1888, 2248
BstMCI	CGRYCG	1 cut(s)	31
BstMWI	GCNNNNNNNGC	9 cut(s)	839, 1004, 1203, 1280, 1289, 1301, 1369, 1832, 1934
BstNI	CCWGG	2 cut(s)	1421, 1715
BstNSI	RCATGY	4 cut(s)	470, 1259, 1483, 1822
BstPI	GGTNACC	1 cut(s)	1454
BstSCI	CCNGG	3 cut(s)	45, 1419, 1713
BstSFI	CTRYAG	3 cut(s)	801, 1643, 2045
BstSLI	GKGCMC	1 cut(s)	1872
BstUI	CGCG	1 cut(s)	1299
BstV1I	GCAGC	6 cut(s)	898, 1279, 1915, 1937, 2154, 2265
BstV2I	GAAGAC	2 cut(s)	251, 1524
BstX2I	RGATCY	2 cut(s)	517, 1720
BstXI	CCANNNNNNTGG	1 cut(s)	1947
BstYI	RGATCY	2 cut(s)	517, 1720
BstZI	CGGCCG	1 cut(s)	28
BsuI	GTATCC	2 cut(s)	1556, 1692
BsuRI	GGCC	5 cut(s)	19, 30, 77, 1951, 2189
BtgZI	GCGATG	2 cut(s)	1100, 1981
BtsI	GCAGTG	3 cut(s)	477, 1342, 1652
BtsIMutI	CAGTG	8 cut(s)	78, 477, 1246, 1342, 1652, 1796, 1892, 2210
BveI	ACCTGC	1 cut(s)	221
Cac8I	GCNNGC	8 cut(s)	167, 504, 508, 1297, 1374, 1446, 1481, 2199
CaiI	CAGNNNCTG	2 cut(s)	1928, 2212
CciI	TCATGA	1 cut(s)	870
CfoI	GCGC	1 cut(s)	1845
Cfr10I	RCCGGY	1 cut(s)	115
Cfr13I	GGNCC	3 cut(s)	105, 539, 1907
CseI	GACGC	2 cut(s)	101, 609
Csp6I	GTAC	6 cut(s)	234, 495, 1134, 1328, 1500, 1799
CspCI	CAANNNNNGTGG	2 cut(s)	2043, 2078
CviQI	GTAC	6 cut(s)	234, 495, 1134, 1328, 1500, 1799
DpnI	GATC	7 cut(s)	34, 519, 1392, 1470, 1722, 1890, 2250
DpnII	GATC	7 cut(s)	32, 517, 1390, 1468, 1720, 1888, 2248
DraI	TTTAAA	2 cut(s)	1252, 1410
EaeI	YGGCCR	2 cut(s)	28, 1949
EagI	CGGCCG	1 cut(s)	28
Eam1104I	CTCTTC	1 cut(s)	1708
EarI	CTCTTC	1 cut(s)	1708
EclXI	CGGCCG	1 cut(s)	28
Eco130I	CCWWGG	1 cut(s)	1523
Eco31I	GGTCTC	2 cut(s)	89, 124
Eco47I	GGWCC	3 cut(s)	105, 539, 1907
Eco52I	CGGCCG	1 cut(s)	28
Eco57I	CTGAAG	2 cut(s)	386, 1028
Eco91I	GGTNACC	1 cut(s)	1454
EcoO65I	GGTNACC	1 cut(s)	1454
EcoRII	CCWGG	2 cut(s)	1419, 1713
EcoT14I	CCWWGG	1 cut(s)	1523
EcoT22I	ATGCAT	2 cut(s)	484, 1820
ErhI	CCWWGG	1 cut(s)	1523
FalI	AAGNNNNNCTT	4 cut(s)	1495, 1527, 1516, 1548
FaqI	GGGAC	3 cut(s)	62, 104, 1962
Fnu4HI	GCNGC	8 cut(s)	41, 912, 1293, 1747, 1926, 1929, 2143, 2254
Fsp4HI	GCNGC	8 cut(s)	41, 912, 1293, 1747, 1926, 1929, 2143, 2254
FspBI	CTAG	4 cut(s)	282, 693, 1445, 2003
GlaI	GCGC	1 cut(s)	1844
GluI	GCNGC	8 cut(s)	41, 912, 1293, 1747, 1926, 1929, 2143, 2254
GsuI	CTGGAG	2 cut(s)	1905, 2016
HaeIII	GGCC	5 cut(s)	19, 30, 77, 1951, 2189
HapII	CCGG	4 cut(s)	27, 46, 116, 1494
HgaI	GACGC	2 cut(s)	101, 609
HhaI	GCGC	1 cut(s)	1845
Hin1I	GRCGYC	1 cut(s)	93
Hin6I	GCGC	1 cut(s)	1843
HinP1I	GCGC	1 cut(s)	1843
HincII	GTYRAC	1 cut(s)	1227
HindII	GTYRAC	1 cut(s)	1227
HindIII	AAGCTT	2 cut(s)	768, 1806
HinfI	GANTC	8 cut(s)	5, 50, 59, 352, 382, 1025, 1310, 2136
HpaII	CCGG	4 cut(s)	27, 46, 116, 1494
HphI	GGTGA	4 cut(s)	188, 238, 1448, 1548
Hpy166II	GTNNAC	3 cut(s)	495, 1227, 1870
Hpy188III	TCNNGA	7 cut(s)	390, 537, 871, 1165, 1307, 1572, 2164
Hpy8I	GTNNAC	3 cut(s)	495, 1227, 1870
HpyAV	CCTTC	7 cut(s)	167, 552, 945, 1052, 1521, 1591, 2044
HpyCH4III	ACNGT	4 cut(s)	1241, 1489, 1791, 2208
HpyCH4IV	ACGT	2 cut(s)	844, 2276
HpyF10VI	GCNNNNNNNGC	9 cut(s)	839, 1004, 1203, 1280, 1289, 1301, 1369, 1832, 1934
HpySE526I	ACGT	2 cut(s)	844, 2276
Hsp92I	GRCGYC	1 cut(s)	93
HspAI	GCGC	1 cut(s)	1843
KpnI	GGTACC	2 cut(s)	237, 1802
Kzo9I	GATC	7 cut(s)	32, 517, 1390, 1468, 1720, 1888, 2248
LmnI	GCTCC	9 cut(s)	29, 48, 131, 617, 768, 830, 885, 1574, 1600
Lsp1109I	GCAGC	6 cut(s)	898, 1279, 1915, 1937, 2154, 2265
LweI	GCATC	5 cut(s)	469, 961, 1325, 1586, 1805
MaeI	CTAG	4 cut(s)	282, 693, 1445, 2003
MaeII	ACGT	2 cut(s)	844, 2276
MaeIII	GTNAC	8 cut(s)	244, 554, 576, 805, 1454, 1489, 1518, 2208
MalI	GATC	7 cut(s)	34, 519, 1392, 1470, 1722, 1890, 2250
MbiI	CCGCTC	1 cut(s)	43
MboI	GATC	7 cut(s)	32, 517, 1390, 1468, 1720, 1888, 2248
MboII	GAAGA	8 cut(s)	251, 405, 650, 767, 1023, 1524, 1695, 2032
MfeI	CAATTG	1 cut(s)	321
MflI	RGATCY	2 cut(s)	517, 1720
MhlI	GDGCHC	2 cut(s)	765, 1872
MlsI	TGGCCA	1 cut(s)	1951
MluI	ACGCGT	1 cut(s)	1297
MluNI	TGGCCA	1 cut(s)	1951
MlyI	GAGTC	5 cut(s)	44, 53, 376, 1034, 2145
MmeI	TCCRAC	2 cut(s)	87, 138
Mox20I	TGGCCA	1 cut(s)	1951
Mph1103I	ATGCAT	2 cut(s)	484, 1820
MscI	TGGCCA	1 cut(s)	1951
MseI	TTAA	6 cut(s)	216, 488, 1251, 1409, 2031, 2108
MslI	CAYNNNNRTG	2 cut(s)	1335, 2215
Msp20I	TGGCCA	1 cut(s)	1951
MspA1I	CMGCKG	2 cut(s)	1363, 1928
MspCI	CTTAAG	1 cut(s)	2107
MspI	CCGG	4 cut(s)	27, 46, 116, 1494
MspR9I	CCNGG	3 cut(s)	47, 1421, 1715
MssI	GTTTAAAC	1 cut(s)	1252
MunI	CAATTG	1 cut(s)	321
MvaI	CCWGG	2 cut(s)	1421, 1715
MvnI	CGCG	1 cut(s)	1299
MwoI	GCNNNNNNNGC	9 cut(s)	839, 1004, 1203, 1280, 1289, 1301, 1369, 1832, 1934
NciI	CCSGG	1 cut(s)	47
NdeII	GATC	7 cut(s)	32, 517, 1390, 1468, 1720, 1888, 2248
NheI	GCTAGC	1 cut(s)	1444
NlaIV	GGNNCC	4 cut(s)	235, 613, 1418, 1800
NmeAIII	GCCGAG	3 cut(s)	39, 1084, 2126
NmuCI	GTSAC	3 cut(s)	244, 1454, 2208
NsiI	ATGCAT	2 cut(s)	484, 1820
NspI	RCATGY	4 cut(s)	470, 1259, 1483, 1822
OliI	CACNNNNGTG	1 cut(s)	2215
PaeI	GCATGC	1 cut(s)	1483
PagI	TCATGA	1 cut(s)	870
PciI	ACATGT	1 cut(s)	1255
PfeI	GAWTC	3 cut(s)	5, 352, 1310
PfoI	TCCNGGA	1 cut(s)	45
PkrI	GCNGC	8 cut(s)	42, 913, 1294, 1748, 1927, 1930, 2144, 2255
PleI	GAGTC	5 cut(s)	44, 53, 376, 1033, 2144
PmeI	GTTTAAAC	1 cut(s)	1252
PpsI	GAGTC	5 cut(s)	44, 53, 376, 1033, 2144
PscI	ACATGT	1 cut(s)	1255
PshBI	ATTAAT	1 cut(s)	216
Psp6I	CCWGG	2 cut(s)	1419, 1713
PspEI	GGTNACC	1 cut(s)	1454
PspGI	CCWGG	2 cut(s)	1419, 1713
PspN4I	GGNNCC	4 cut(s)	235, 613, 1418, 1800
PspPI	GGNCC	3 cut(s)	105, 539, 1907
PstI	CTGCAG	2 cut(s)	1647, 2049
PstNI	CAGNNNCTG	2 cut(s)	1928, 2212
PsuI	RGATCY	2 cut(s)	517, 1720
PvuII	CAGCTG	2 cut(s)	1363, 1928
RsaI	GTAC	6 cut(s)	235, 496, 1135, 1329, 1501, 1800
RsaNI	GTAC	6 cut(s)	234, 495, 1134, 1328, 1500, 1799
RseI	CAYNNNNRTG	2 cut(s)	1335, 2215
SaqAI	TTAA	6 cut(s)	216, 488, 1251, 1409, 2031, 2108
SatI	GCNGC	8 cut(s)	41, 912, 1293, 1747, 1926, 1929, 2143, 2254
Sau3AI	GATC	7 cut(s)	32, 517, 1390, 1468, 1720, 1888, 2248
Sau96I	GGNCC	3 cut(s)	105, 539, 1907
SchI	GAGTC	5 cut(s)	44, 53, 376, 1034, 2145
ScrFI	CCNGG	3 cut(s)	47, 1421, 1715
SduI	GDGCHC	2 cut(s)	765, 1872
SfaNI	GCATC	5 cut(s)	469, 961, 1325, 1586, 1805
SfcI	CTRYAG	3 cut(s)	801, 1643, 2045
SinI	GGWCC	3 cut(s)	105, 539, 1907
SmiMI	CAYNNNNRTG	2 cut(s)	1335, 2215
SmlI	CTYRAG	4 cut(s)	1165, 1590, 1989, 2107
SmoI	CTYRAG	4 cut(s)	1165, 1590, 1989, 2107
SphI	GCATGC	1 cut(s)	1483
SsiI	CCGC	6 cut(s)	41, 296, 574, 1675, 1747, 1910
SspMI	CTAG	4 cut(s)	282, 693, 1445, 2003
StyD4I	CCNGG	3 cut(s)	45, 1419, 1713
StyI	CCWWGG	1 cut(s)	1523
TaaI	ACNGT	4 cut(s)	1241, 1489, 1791, 2208
TaiI	ACGT	2 cut(s)	847, 2279
TaqI	TCGA	2 cut(s)	99, 1471
TatI	WGTACW	3 cut(s)	494, 1327, 1499
TauI	GCSGC	2 cut(s)	43, 1749
TfiI	GAWTC	3 cut(s)	5, 352, 1310
Tru1I	TTAA	6 cut(s)	216, 488, 1251, 1409, 2031, 2108
Tru9I	TTAA	6 cut(s)	216, 488, 1251, 1409, 2031, 2108
TscAI	CASTG	8 cut(s)	85, 477, 1246, 1342, 1652, 1796, 1899, 2217
TseFI	GTSAC	3 cut(s)	244, 1454, 2208
TseI	GCWGC	6 cut(s)	911, 1292, 1925, 1928, 2142, 2253
Tsp45I	GTSAC	3 cut(s)	244, 1454, 2208
TspGWI	ACGGA	2 cut(s)	118, 770
TspRI	CASTG	8 cut(s)	85, 477, 1246, 1342, 1652, 1796, 1899, 2217
Vha464I	CTTAAG	1 cut(s)	2107
VneI	GTGCAC	1 cut(s)	1868
VpaK11BI	GGWCC	3 cut(s)	105, 539, 1907
VspI	ATTAAT	1 cut(s)	216
XapI	RAATTY	3 cut(s)	688, 1858, 2033
XceI	RCATGY	4 cut(s)	470, 1259, 1483, 1822
XcmI	CCANNNNNNNNNTGG	2 cut(s)	510, 860
XspI	CTAG	4 cut(s)	282, 693, 1445, 2003
Zsp2I	ATGCAT	2 cut(s)	484, 1820

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.