Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0013401

Physical Location & Seq

Genomic Coordinates Reverse (-)

28898848 .. 28918748

Gene Structure 19901 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG131400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2151 bp

ATGAGGATAATAGTCTTTGGGTTTCGCCCTAAAACAAGGCAGAGACATGCAGTGTTTGATGCATTATTAAAGTGTACAAAGCCAGCGAGCCTATGGGATCTTTTTTCTTTTGTTTCTGGACCTTCCAAATATAGTAACACTAATCCAAAGGTGCGGTTACTGAATGAGTATTTTCGGCTTCTTGGAAAAGGCTCCCATGCGTCTATGAATATGATTGAAGATGGGTCATTCACTTTGTCAAATGATTTGTGGAGAATAAGTAGTGTAAATTCTAGCTATTCATTGTGCCAGAGTTATCCATTTGCCTTGATTGTTCCGAAATCCATTACTGATGAAGAAGTGCTCCAAGCTTCCAGCTTCCGTGCAAGATGTCGGTTGCCTGTAGTTACATGGTGTCATCCAAGAACAGGAGCAGTTCTGGCACGTTCATCCCAACCCTTAGTTGGTATCATGATGAACATGAGGAGCAACACAGATGAAAAGCTCGTTGCTGCCCTTTGCTCTGAACTTACTGGTAGTGGTGGTAAAAGAAGGAAGCTATATATAGCAGATGCAAGACCACGAAAAAATGCTTTAGCTAATGGTGCAATGGGAGGTGGTTCTGAGTCATCTTCAAATTACCTTCAGTCTGAGATTGTTTTCTTTGGGATAGACAACATCCATGCGATGAGAGATAGTTTTGCTCGGCTCAGAGATTACTTAGATACTTATGGTACAGCTTCATCGGATGGAATGTCATCTTTCTTGAGGGATGGTGGGTGGAGTTGGGGTGGAGGCAACCTTAGCAGTATGTCTGCTTCAGTGTCAACTCTTGGAGACAGTGGTTGGTTTAAACATGTTCAAAGTGTGTTAGCTGGTTCGGCTTGGATTGCTGCACGCGTTGCTCTGGAATCGGCATCGGTGCTTGTACATTGCAGTGATGGATGGGATAGAACTACTCAGCTGGTTTCGCTTGCCATTTTGTTGCTTGATCCATACTATCGGACTTTAAATGGGTTCCAGGCACTCATTGAGAAGGATTGGCTAGCATTTGGTCACCCATTTGCAGATCGAGTTGGCATGCCAACTGTAACCGGAAGTACAAGCATACCTTCTGAGTTACCAAGGCAGTCTTCTACTGGGAGTATCCAATCATCACCCAATCGCCAGTCAGGAGCATCCTTCACATCTCAAGCTCCTACATCTCACGCACAGACTTCAAACAACTATTCTCCCATATTTCTGCAGTGGGTAGATTGTGTTTCACAGCTATTGCGGATGTATCCTTTTGCTTTTGAGTTCTCTTCGGTTTTCCTGGTGGATCTATTGGATTGTGTTCTATCCTGCCGCTTTGGAAACTTCTTTTGTAATAGTGAAAAGGAGAGGCAACAGTGTGGGGTACCTGAAGCTTGTGGGTGCATGTGGGCATATTTGGCTGATTTGCGCTCTTTAGATGGAAATTCTCATGTGCACTATAATTATTTCTATGATCCACTGAAACACAATGGTCCGCTATTACCTCCAGCAGCTGGTTTAGCACCAACTCTATGGCCACAATTCCATTTGCGATGGGCTTGTCCCTCAGAGGCTCAAGCTGGAGAGCTAGAAGCTCAATTTAGGAAGATGGATATTAAATTCGTGGAACTGCAGAAGGCAAAGGAAGTGGCAGAAAGGAAAGCTAAAGAAATCACTACTCTCATGGAAACCTTAAGTGCAGATGTAAGACATGAAAAGCAAGTCAGCAGCTCGGCTATGAAGTTGGTCAAGAGGGCAAACAAGGAGAGTGAGGCCATGAAGCGAGCTATACAGTCACTGGGGTGCAAGGTACATTTTTCAAGTAGCGGAGATTGCACTGTTGACATTGAAAGTAGTGTAATTGAAGGTCCACAAAAATTAGTTTGTTCTTCAAAAAGACAAGAAGATGGCACTCTGCAGAATGATGAGAAATCAGACCTGTCTGTTTCCATTACGGTCGTGGCAGATGATGTTGATGGCAGCAATCCAATTGGTCGAGTTTGTGAAACTTTATGCCCATTACGCATGCGAGATGGAGGCTGCAGGTGGCCAGATGCTGGCTGTGCTCAATTGGGCAGCCAATTTGTTGGACTGAAGGCCAACTTTGAGGCATTTGATCAACTTTCAATCTATGATAGTTATTTCCAACCTAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004438 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009987 GO:0009991 GO:0010035 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0023052 GO:0030258 GO:0031410 GO:0031668 GO:0031982 GO:0033554 GO:0034593 GO:0035556 GO:0042221 GO:0042578 GO:0042631 GO:0043226 GO:0043227 GO:0043229 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046486 GO:0046488 GO:0046839 GO:0046856 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0052629 GO:0052744 GO:0052866 GO:0065007 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071704 GO:0080134 GO:0097708 GO:0104004 GO:0106018 GO:1901700 GO:1901701 GO:2000070

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04070 map00562 map01100 map04070

Pfam Domains

Protein Families

Myotub-related

Protein Analysis

716

Amino Acids

78.96

Weight (kDa)

7.97

Isoelectric Point (pI)

50.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myotub-related	PF06602	78 - 456	3.2e-125	Myotubularin-like phosphatase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013401)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10550 AT5G04540
fragaria_vesca	FvH4_7g06400
malus_domestica	MD02G1244600.v1.1 MD07G1072600.v1.1
prunus_persica	Prupe.2G090700_v2.0.a1 Prupe.2G090700_v2.0.a1
pyrus_communis	pycom02g21050 pycom07g05570
rosa_chinensis	RchiOBHm_Chr1g0334491
rosa_laevigata	RLG00000029449
rosa_roxburghii	Rroxscaffold_4G00316800
rosa_rugosa	Rorug01G0114300
rosa_samantha	Rh1AG139500 Rh1BG105700 Rh1CG131400 Rh1DG143400
rosa_wichuraiana	Rw1G011500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2028
Acc36I	ACCTGC	1 cut(s)	2028
Acc65I	GGTACC	1 cut(s)	1378
AccB1I	GGYRCC	1 cut(s)	1378
AccB7I	CCANNNNNTGG	2 cut(s)	1508, 2051
AccII	CGCG	1 cut(s)	879
AciI	CCGC	5 cut(s)	154, 1255, 1327, 1490, 1821
AclWI	GGATC	4 cut(s)	105, 965, 1308, 1463
AcoI	YGGCCR	2 cut(s)	1529, 2042
AcsI	RAATTY	3 cut(s)	268, 1438, 1613
AcuI	CTGAAG	4 cut(s)	608, 783, 1404, 2108
AfaI	GTAC	6 cut(s)	76, 715, 909, 1081, 1380, 1806
AfiI	CCNNNNNNNGG	4 cut(s)	407, 443, 1508, 2051
AflII	CTTAAG	1 cut(s)	1687
AflIII	ACRYGT	2 cut(s)	835, 877
AgsI	TTSAA	9 cut(s)	218, 615, 842, 1200, 1815, 1844, 1859, 1887, 2121
AjnI	CCWGG	2 cut(s)	999, 1293
AjuI	GAANNNNNNNTTGG	2 cut(s)	1096, 1128
AleI	CACNNNNGTG	1 cut(s)	1795
Alw21I	GWGCWC	3 cut(s)	345, 1452, 2062
Alw26I	GTCTC	2 cut(s)	37, 810
Alw44I	GTGCAC	1 cut(s)	1448
AlwI	GGATC	4 cut(s)	105, 965, 1308, 1463
AlwNI	CAGNNNCTG	3 cut(s)	1508, 1792, 2051
AoxI	GGCC	4 cut(s)	1529, 1767, 2042, 2091
ApaLI	GTGCAC	1 cut(s)	1448
ApeKI	GCWGC	7 cut(s)	491, 872, 1505, 1722, 1974, 2034, 2070
ApoI	RAATTY	3 cut(s)	268, 1438, 1613
Asp718I	GGTACC	1 cut(s)	1378
AspLEI	GCGC	1 cut(s)	1425
AspS9I	GGNCC	3 cut(s)	119, 1487, 1862
AsuHPI	GGTGA	2 cut(s)	1028, 1128
AsuNHI	GCTAGC	1 cut(s)	1024
AvaII	GGWCC	3 cut(s)	119, 1487, 1862
BaeGI	GKGCMC	1 cut(s)	1452
BalI	TGGCCA	2 cut(s)	1531, 2044
BanI	GGYRCC	1 cut(s)	1378
BarI	GAAGNNNNNNTAC	2 cut(s)	781, 813
BbsI	GAAGAC	1 cut(s)	1104
Bbv12I	GWGCWC	3 cut(s)	345, 1452, 2062
BbvI	GCAGC	7 cut(s)	478, 859, 1517, 1734, 1986, 2021, 2082
BciT130I	CCWGG	2 cut(s)	1001, 1295
BciVI	GTATCC	2 cut(s)	1136, 1272
BclI	TGATCA	1 cut(s)	2110
BcoDI	GTCTC	2 cut(s)	37, 810
BfaI	CTAG	3 cut(s)	273, 1025, 1583
BfmI	CTRYAG	5 cut(s)	381, 1223, 1625, 1910, 2035
BfrI	CTTAAG	1 cut(s)	1687
BfuAI	ACCTGC	1 cut(s)	2028
BfuI	GTATCC	2 cut(s)	1136, 1272
BisI	GCNGC	8 cut(s)	492, 873, 1327, 1506, 1723, 1975, 2035, 2071
BlsI	GCNGC	8 cut(s)	493, 874, 1328, 1507, 1724, 1976, 2036, 2072
Bme1390I	CCNGG	2 cut(s)	1001, 1295
Bme18I	GGWCC	3 cut(s)	119, 1487, 1862
BmgT120I	GGNCC	3 cut(s)	119, 1487, 1862
BmiI	GGNNCC	3 cut(s)	193, 998, 1380
BmrFI	CCNGG	2 cut(s)	1001, 1295
BmrI	ACTGGG	2 cut(s)	1128, 1802
BmsI	GCATC	5 cut(s)	49, 541, 905, 1166, 2038
BmtI	GCTAGC	1 cut(s)	1028
BmuI	ACTGGG	2 cut(s)	1128, 1802
BpiI	GAAGAC	1 cut(s)	1104
BpmI	CTGGAG	2 cut(s)	1485, 1596
Bpu10I	CCTNAGC	1 cut(s)	782
BpuEI	CTTGAG	3 cut(s)	766, 1155, 1554
BsaJI	CCNNGG	1 cut(s)	1103
BsaWI	WCCGGW	1 cut(s)	1073
BsaXI	ACNNNNNCTCC	4 cut(s)	244, 274, 754, 784
Bsc4I	CCNNNNNNNGG	4 cut(s)	407, 443, 1508, 2051
Bse1I	ACTGG	4 cut(s)	517, 1123, 1147, 1797
Bse3DI	GCAATG	2 cut(s)	594, 910
BseBI	CCWGG	2 cut(s)	1001, 1295
BseDI	CCNNGG	1 cut(s)	1103
BseGI	GGATG	8 cut(s)	397, 428, 657, 733, 757, 929, 1157, 1263
BseLI	CCNNNNNNNGG	4 cut(s)	407, 443, 1508, 2051
BseMI	GCAATG	2 cut(s)	594, 910
BseMII	CTCAG	6 cut(s)	594, 621, 703, 953, 1086, 1575
BseNI	ACTGG	4 cut(s)	517, 1123, 1147, 1797
BseRI	GAGGAG	1 cut(s)	478
BseSI	GKGCMC	1 cut(s)	1452
BseXI	GCAGC	7 cut(s)	478, 859, 1517, 1734, 1986, 2021, 2082
BsgI	GTGCAG	2 cut(s)	858, 1713
Bsh1236I	CGCG	1 cut(s)	879
Bsh1285I	CGRYCG	1 cut(s)	1953
BshFI	GGCC	4 cut(s)	1531, 1769, 2044, 2093
BshNI	GGYRCC	1 cut(s)	1378
BsiEI	CGRYCG	1 cut(s)	1953
BsiHKAI	GWGCWC	3 cut(s)	345, 1452, 2062
BsiSI	CCGG	1 cut(s)	1074
BslFI	GGGAC	1 cut(s)	1542
BslI	CCNNNNNNNGG	4 cut(s)	407, 443, 1508, 2051
BsmAI	GTCTC	2 cut(s)	37, 810
BsmFI	GGGAC	1 cut(s)	1542
BsnI	GGCC	4 cut(s)	1531, 1769, 2044, 2093
Bsp1286I	GDGCHC	3 cut(s)	345, 1452, 2062
Bsp1407I	TGTACA	2 cut(s)	74, 907
Bsp143I	GATC	6 cut(s)	97, 970, 1048, 1300, 1468, 2110
BspACI	CCGC	5 cut(s)	154, 1255, 1327, 1490, 1821
BspANI	GGCC	4 cut(s)	1531, 1769, 2044, 2093
BspCNI	CTCAG	6 cut(s)	595, 622, 702, 952, 1087, 1574
BspFNI	CGCG	1 cut(s)	879
BspHI	TCATGA	1 cut(s)	450
BspLI	GGNNCC	3 cut(s)	193, 998, 1380
BspMAI	CTGCAG	4 cut(s)	1227, 1629, 1914, 2039
BspMI	ACCTGC	1 cut(s)	2028
BspOI	GCTAGC	1 cut(s)	1028
BspPI	GGATC	4 cut(s)	105, 965, 1308, 1463
BspT107I	GGYRCC	1 cut(s)	1378
BspTI	CTTAAG	1 cut(s)	1687
BsrDI	GCAATG	2 cut(s)	594, 910
BsrGI	TGTACA	2 cut(s)	74, 907
BsrI	ACTGG	4 cut(s)	517, 1123, 1147, 1797
BssECI	CCNNGG	1 cut(s)	1103
BssMI	GATC	6 cut(s)	97, 970, 1048, 1300, 1468, 2110
BssT1I	CCWWGG	1 cut(s)	1103
Bst2UI	CCWGG	2 cut(s)	1001, 1295
Bst4CI	ACNGT	6 cut(s)	821, 1069, 1371, 1788, 1834, 1951
Bst6I	CTCTTC	1 cut(s)	1288
BstAFI	CTTAAG	1 cut(s)	1687
BstAPI	GCANNNNNTGC	1 cut(s)	881
BstAUI	TGTACA	2 cut(s)	74, 907
BstC8I	GCNNGC	9 cut(s)	84, 88, 877, 954, 1026, 1061, 1779, 2021, 2053
BstDEI	CTNAG	9 cut(s)	439, 603, 630, 689, 700, 782, 939, 1095, 1561
BstEII	GGTNACC	1 cut(s)	1034
BstF5I	GGATG	8 cut(s)	397, 428, 657, 733, 757, 929, 1157, 1263
BstFNI	CGCG	1 cut(s)	879
BstHHI	GCGC	1 cut(s)	1425
BstKTI	GATC	6 cut(s)	100, 973, 1051, 1303, 1471, 2113
BstMAI	GTCTC	2 cut(s)	37, 810
BstMBI	GATC	6 cut(s)	97, 970, 1048, 1300, 1468, 2110
BstMCI	CGRYCG	1 cut(s)	1953
BstNI	CCWGG	2 cut(s)	1001, 1295
BstNSI	RCATGY	5 cut(s)	50, 839, 1063, 1402, 2023
BstPI	GGTNACC	1 cut(s)	1034
BstSCI	CCNGG	2 cut(s)	999, 1293
BstSFI	CTRYAG	5 cut(s)	381, 1223, 1625, 1910, 2035
BstSLI	GKGCMC	1 cut(s)	1452
BstUI	CGCG	1 cut(s)	879
BstV1I	GCAGC	7 cut(s)	478, 859, 1517, 1734, 1986, 2021, 2082
BstV2I	GAAGAC	1 cut(s)	1104
BstX2I	RGATCY	2 cut(s)	97, 1300
BstXI	CCANNNNNNTGG	2 cut(s)	1527, 2081
BstYI	RGATCY	2 cut(s)	97, 1300
BsuI	GTATCC	2 cut(s)	1136, 1272
BsuRI	GGCC	4 cut(s)	1531, 1769, 2044, 2093
BtgZI	GCGATG	2 cut(s)	680, 1561
BtsCI	GGATG	8 cut(s)	397, 428, 657, 733, 757, 929, 1157, 1263
BtsI	GCAGTG	3 cut(s)	57, 922, 1232
BtsIMutI	CAGTG	9 cut(s)	57, 807, 826, 922, 1232, 1376, 1472, 1790, 1830
BveI	ACCTGC	1 cut(s)	2028
Cac8I	GCNNGC	9 cut(s)	84, 88, 877, 954, 1026, 1061, 1779, 2021, 2053
CaiI	CAGNNNCTG	3 cut(s)	1508, 1792, 2051
CciI	TCATGA	1 cut(s)	450
CfoI	GCGC	1 cut(s)	1425
Cfr13I	GGNCC	3 cut(s)	119, 1487, 1862
CseI	GACGC	1 cut(s)	189
Csp6I	GTAC	6 cut(s)	75, 714, 908, 1080, 1379, 1805
CspCI	CAANNNNNGTGG	2 cut(s)	1623, 1658
CviQI	GTAC	6 cut(s)	75, 714, 908, 1080, 1379, 1805
DdeI	CTNAG	9 cut(s)	439, 603, 630, 689, 700, 782, 939, 1095, 1561
DpnI	GATC	6 cut(s)	99, 972, 1050, 1302, 1470, 2112
DpnII	GATC	6 cut(s)	97, 970, 1048, 1300, 1468, 2110
DraI	TTTAAA	2 cut(s)	832, 990
EaeI	YGGCCR	2 cut(s)	1529, 2042
Eam1104I	CTCTTC	1 cut(s)	1288
EarI	CTCTTC	1 cut(s)	1288
Eco130I	CCWWGG	1 cut(s)	1103
Eco47I	GGWCC	3 cut(s)	119, 1487, 1862
Eco57I	CTGAAG	4 cut(s)	608, 783, 1404, 2108
Eco91I	GGTNACC	1 cut(s)	1034
EcoO65I	GGTNACC	1 cut(s)	1034
EcoRII	CCWGG	2 cut(s)	999, 1293
EcoT14I	CCWWGG	1 cut(s)	1103
EcoT22I	ATGCAT	1 cut(s)	64
ErhI	CCWWGG	1 cut(s)	1103
FalI	AAGNNNNNCTT	6 cut(s)	1075, 1107, 1096, 1128, 2081, 2113
FaqI	GGGAC	1 cut(s)	1542
FbaI	TGATCA	1 cut(s)	2110
Fnu4HI	GCNGC	8 cut(s)	492, 873, 1327, 1506, 1723, 1975, 2035, 2071
FokI	GGATG	8 cut(s)	384, 415, 644, 740, 764, 936, 1144, 1270
Fsp4HI	GCNGC	8 cut(s)	492, 873, 1327, 1506, 1723, 1975, 2035, 2071
FspBI	CTAG	3 cut(s)	273, 1025, 1583
GlaI	GCGC	1 cut(s)	1424
GluI	GCNGC	8 cut(s)	492, 873, 1327, 1506, 1723, 1975, 2035, 2071
GsuI	CTGGAG	2 cut(s)	1485, 1596
HaeIII	GGCC	4 cut(s)	1531, 1769, 2044, 2093
HapII	CCGG	1 cut(s)	1074
HgaI	GACGC	1 cut(s)	189
HhaI	GCGC	1 cut(s)	1425
Hin6I	GCGC	1 cut(s)	1423
HinP1I	GCGC	1 cut(s)	1423
HincII	GTYRAC	2 cut(s)	807, 1837
HindII	GTYRAC	2 cut(s)	807, 1837
HindIII	AAGCTT	2 cut(s)	348, 1386
HinfI	GANTC	2 cut(s)	605, 890
HpaII	CCGG	1 cut(s)	1074
HphI	GGTGA	2 cut(s)	1028, 1128
Hpy166II	GTNNAC	5 cut(s)	75, 807, 1450, 1837, 1865
Hpy188III	TCNNGA	6 cut(s)	117, 451, 745, 887, 1152, 1744
Hpy8I	GTNNAC	5 cut(s)	75, 807, 1450, 1837, 1865
HpyAV	CCTTC	9 cut(s)	132, 525, 632, 1009, 1101, 1171, 1624, 1853, 2083
HpyCH4III	ACNGT	6 cut(s)	821, 1069, 1371, 1788, 1834, 1951
HpyCH4IV	ACGT	1 cut(s)	424
HpyF3I	CTNAG	9 cut(s)	439, 603, 630, 689, 700, 782, 939, 1095, 1561
HpySE526I	ACGT	1 cut(s)	424
HspAI	GCGC	1 cut(s)	1423
KpnI	GGTACC	1 cut(s)	1382
Ksp22I	TGATCA	1 cut(s)	2110
Kzo9I	GATC	6 cut(s)	97, 970, 1048, 1300, 1468, 2110
LmnI	GCTCC	6 cut(s)	197, 348, 410, 465, 1154, 1180
Lsp1109I	GCAGC	7 cut(s)	478, 859, 1517, 1734, 1986, 2021, 2082
LweI	GCATC	5 cut(s)	49, 541, 905, 1166, 2038
MaeI	CTAG	3 cut(s)	273, 1025, 1583
MaeII	ACGT	1 cut(s)	424
MaeIII	GTNAC	7 cut(s)	134, 156, 385, 1034, 1069, 1098, 1788
MalI	GATC	6 cut(s)	99, 972, 1050, 1302, 1470, 2112
MboI	GATC	6 cut(s)	97, 970, 1048, 1300, 1468, 2110
MboII	GAAGA	8 cut(s)	230, 347, 603, 1104, 1275, 1612, 1875, 1910
MfeI	CAATTG	2 cut(s)	1983, 2063
MflI	RGATCY	2 cut(s)	97, 1300
MhlI	GDGCHC	3 cut(s)	345, 1452, 2062
MlsI	TGGCCA	2 cut(s)	1531, 2044
MluI	ACGCGT	1 cut(s)	877
MluNI	TGGCCA	2 cut(s)	1531, 2044
MlyI	GAGTC	1 cut(s)	614
MmeI	TCCRAC	1 cut(s)	2062
Mox20I	TGGCCA	2 cut(s)	1531, 2044
Mph1103I	ATGCAT	1 cut(s)	64
MscI	TGGCCA	2 cut(s)	1531, 2044
MseI	TTAA	5 cut(s)	68, 831, 989, 1611, 1688
MslI	CAYNNNNRTG	2 cut(s)	915, 1795
Msp20I	TGGCCA	2 cut(s)	1531, 2044
MspA1I	CMGCKG	2 cut(s)	943, 1508
MspCI	CTTAAG	1 cut(s)	1687
MspI	CCGG	1 cut(s)	1074
MspR9I	CCNGG	2 cut(s)	1001, 1295
MssI	GTTTAAAC	1 cut(s)	832
MunI	CAATTG	2 cut(s)	1983, 2063
MvaI	CCWGG	2 cut(s)	1001, 1295
MvnI	CGCG	1 cut(s)	879
NdeII	GATC	6 cut(s)	97, 970, 1048, 1300, 1468, 2110
NheI	GCTAGC	1 cut(s)	1024
NlaIV	GGNNCC	3 cut(s)	193, 998, 1380
NmeAIII	GCCGAG	2 cut(s)	664, 1706
NmuCI	GTSAC	2 cut(s)	1034, 1788
NsiI	ATGCAT	1 cut(s)	64
NspI	RCATGY	5 cut(s)	50, 839, 1063, 1402, 2023
OliI	CACNNNNGTG	1 cut(s)	1795
PaeI	GCATGC	2 cut(s)	1063, 2023
PagI	TCATGA	1 cut(s)	450
PaqCI	CACCTGC	1 cut(s)	2028
PciI	ACATGT	1 cut(s)	835
PfeI	GAWTC	1 cut(s)	890
PflMI	CCANNNNNTGG	2 cut(s)	1508, 2051
PkrI	GCNGC	8 cut(s)	493, 874, 1328, 1507, 1724, 1976, 2036, 2072
PleI	GAGTC	1 cut(s)	613
PmeI	GTTTAAAC	1 cut(s)	832
PpsI	GAGTC	1 cut(s)	613
PscI	ACATGT	1 cut(s)	835
Psp6I	CCWGG	2 cut(s)	999, 1293
PspEI	GGTNACC	1 cut(s)	1034
PspGI	CCWGG	2 cut(s)	999, 1293
PspN4I	GGNNCC	3 cut(s)	193, 998, 1380
PspPI	GGNCC	3 cut(s)	119, 1487, 1862
PstI	CTGCAG	4 cut(s)	1227, 1629, 1914, 2039
PstNI	CAGNNNCTG	3 cut(s)	1508, 1792, 2051
PsuI	RGATCY	2 cut(s)	97, 1300
PvuII	CAGCTG	2 cut(s)	943, 1508
RsaI	GTAC	6 cut(s)	76, 715, 909, 1081, 1380, 1806
RsaNI	GTAC	6 cut(s)	75, 714, 908, 1080, 1379, 1805
RseI	CAYNNNNRTG	2 cut(s)	915, 1795
SaqAI	TTAA	5 cut(s)	68, 831, 989, 1611, 1688
SatI	GCNGC	8 cut(s)	492, 873, 1327, 1506, 1723, 1975, 2035, 2071
Sau3AI	GATC	6 cut(s)	97, 970, 1048, 1300, 1468, 2110
Sau96I	GGNCC	3 cut(s)	119, 1487, 1862
SchI	GAGTC	1 cut(s)	614
ScrFI	CCNGG	2 cut(s)	1001, 1295
SduI	GDGCHC	3 cut(s)	345, 1452, 2062
SfaNI	GCATC	5 cut(s)	49, 541, 905, 1166, 2038
SfcI	CTRYAG	5 cut(s)	381, 1223, 1625, 1910, 2035
SinI	GGWCC	3 cut(s)	119, 1487, 1862
SmiMI	CAYNNNNRTG	2 cut(s)	915, 1795
SmlI	CTYRAG	4 cut(s)	745, 1170, 1569, 1687
SmoI	CTYRAG	4 cut(s)	745, 1170, 1569, 1687
SphI	GCATGC	2 cut(s)	1063, 2023
SsiI	CCGC	5 cut(s)	154, 1255, 1327, 1490, 1821
SspMI	CTAG	3 cut(s)	273, 1025, 1583
StyD4I	CCNGG	2 cut(s)	999, 1293
StyI	CCWWGG	1 cut(s)	1103
TaaI	ACNGT	6 cut(s)	821, 1069, 1371, 1788, 1834, 1951
TaiI	ACGT	1 cut(s)	427
TaqI	TCGA	2 cut(s)	1051, 1990
TatI	WGTACW	3 cut(s)	74, 907, 1079
TauI	GCSGC	1 cut(s)	1329
TfiI	GAWTC	1 cut(s)	890
Tru1I	TTAA	5 cut(s)	68, 831, 989, 1611, 1688
Tru9I	TTAA	5 cut(s)	68, 831, 989, 1611, 1688
TscAI	CASTG	9 cut(s)	57, 807, 826, 922, 1232, 1376, 1479, 1797, 1837
TseFI	GTSAC	2 cut(s)	1034, 1788
TseI	GCWGC	7 cut(s)	491, 872, 1505, 1722, 1974, 2034, 2070
Tsp45I	GTSAC	2 cut(s)	1034, 1788
TspGWI	ACGGA	1 cut(s)	350
TspRI	CASTG	9 cut(s)	57, 807, 826, 922, 1232, 1376, 1479, 1797, 1837
Van91I	CCANNNNNTGG	2 cut(s)	1508, 2051
Vha464I	CTTAAG	1 cut(s)	1687
VneI	GTGCAC	1 cut(s)	1448
VpaK11BI	GGWCC	3 cut(s)	119, 1487, 1862
XapI	RAATTY	3 cut(s)	268, 1438, 1613
XceI	RCATGY	5 cut(s)	50, 839, 1063, 1402, 2023
XcmI	CCANNNNNNNNNTGG	3 cut(s)	90, 440, 1951
XspI	CTAG	3 cut(s)	273, 1025, 1583
Zsp2I	ATGCAT	1 cut(s)	64

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.