Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0013401

Physical Location & Seq

Genomic Coordinates Reverse (-)

6441163 .. 6454202

Gene Structure 13040 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g06400.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2571 bp

ATGGCCTCCGCTCCGAAGCCACGCTCCGGCGGCCGATCAAATTCTCTCCGGGACTCCCACGACTCCGACAAGATGGAGGCCACTGGGCTCTGGGACGCCCTCGAATGGACCATTGAGCCGGTCTCACGCTCCGTTCCAGGCGCCGTCTCGCATTTGAATTTGGATTGCTTGCTTGAAGCTGAGCAAGTTCAAGTTGAGGGGCATGGCGTTGTTCTTATCAATACTGACGAGGCAGGGACCTTGATAGTCACCAATTTTCGTCTTCTTTTTCTGAGTGAAGGAACTAGGAAGGTTATCCCGCTTGGCACGATACCTTTGGCAACAATTGAGAAGTTCAACAAAATTGTTGTAAAGAATCAATCAACCCCTCGTCAATCTGACAAGACTCCATCAAGAAGATTGCTTCAGGTCATTGGTAAAGACATGAGGATAATAGTCTTTGGGTTTCGCCCTAAAACAAGGCAGAGACGTACTGTGTTTGATGCATTAGTAACATGTACGAAGCCAGCAAGCCTATGGGATCTTTATGCTTTTGTTTCTGGCCCTTCCAAATACAGTAACACTAATCCAAAGGTGCGGTTACTAAATGAGTATTTTCGGCTTCTTGGAAAAGGCTCCTGTGCGTCTATGGATATGATTGAAGATGGGTCATTCACTTTGTCAAATAATTTTTGGAGAATAAGTAGTGTAAATTCTAGTTACTCATTGTGCCAGACTTATCCATTTGCCTTGATAGTTCCGAAATCCATTACTGATGAAGAAGTGATCCAAGCTTCCAGCTTCCGTGCAAGATGTCGGTTGCCTGTAGTTACATGGTGTCATCCAAGAACAGGAGCAGTTCTGGCACGTTCATCCCAACCCTTAGTTGGTATCATGATGAACATGAGGAGTAACACAGATGAAAAGCTTGTTGCTGCCCTTTGCTCTGAACTTACTGGTGGTAAAAGAAGGAAGCTATATATAGCTGATGCAAGACCACGGAAAAATGCTTTAGCTAATGGTGCAATGGGTGGTGGTTCTGAGTCATCTTCAAATTACTTCCAGTCTGAGATTGTATTCTTTGGGATAGACAACATCCATGCAATGAGAGATAGTTTTGCTCGGCTCAGAGACTATTTAGATACTCATGGTACAGCTTCATCGGATGGAATGTCATCTTTCCTGAGGCATGGTGGATGGACTTGGGGTGGAGGCAACCTTAGTAGTATGTCTGCTTCCGTGTCAACTCTTGGAGACAGTGGTTGGTTAATACATGTTCAAAGTGTTTTGGCTGGTTCGGCTTGGATTGCTGCACACGTTGATCTGGAATCGGCATCGGTGCTTGTACATTGCAGTGATGGATGGGATAGAACTACTCAGCTGGTTTCACTTGCAATTTTGTTGCTTGATCCATACTATCGTACTTTAAATGGGTTCCAGGCACTTGTTGAGAAAGATTGGCTAGCATTTGGCCACCCATTTGCAGATCGAGTTGGCATGCCAGCTATAACAGGAAGTACAAACATACCTTCTGAGTTACCAAGGCAATCTTCTACTGGGAGTTTCCAATCATCACCCAATCGCCAGACAACAGGATCCTTCTCATCTCAAGCTCCTACATCTCATGCACAGACTTCAAACAACTATTCTCCCATATTTCTGCAGTGGGTAGATTGTGTTTCACAATTAATGCGGATGTATCCTTTTGCTTTTGAGTTCTCATCGGTTTTCCTGGTGGATCTATTGGATTGTGTCTTATCCTCCCGCTTTGGGAATTTCTTTTGTAATAGTGAAATGGAGAGGCAACATTGGGGGGTACCCGAAGCTTGTGGATGCATGTGGGCATATTTGGCTGATTTGCGCTCTTCTGATGGAACTTCTCATGTGCACTATAATTATTTCTATGATCCACTGAAACACAATGGTCCACTATTGCCTCCAGCAGCTGCTTTAGCACCAACTCTATGGCCGCAATTCCATTTGCGATGGGCTTGTCCCTCAGAGGCTCAAGCTGGAGAGCTCGAAGCTCAATTTAGAAAGATGGATGTCAAATTCTCGGAATTGCAGAAGGCAAAGGAAGTGGCAGAAAAGAAAGCTAAAGAAATCACCACTCTCATGGAAACTTTAAGTGCAGATGTAAGACATGAAAAGCAAGTCAGCAGCTCCGCTATGAAGTTGGTCAAGAGAGCAAACAAGGAAAGTGAGGCCATGAAACGAGCTATACAGTCACTAGGGTGCAAGGTACATTTTTCAAGCAGCGGAGATTGCACTGTTGACATCGAAAGTAGCGTGATTGAAGCTCCACAGAAATTACTTTGTTCTTCTTCGAAAAGACAGTCAGATGGCAGTCTGCAGAATGATGATAAGTCAGACCTGTCTGTTTCCATTACAGTCATGGCAGATGATGTTGATAGCAGCAATCCAATTGCTCGAGTTTGTGAAACTTTATGCCCATTACGCATGCGAGATGGAGGCTGCAGGTGGCCAGATGCTGGCTGTGCTCAATTGGGTAGCCAATTTGTTGGGCTGAAGGCCAACTTTGAGGCATTTGATCACCTTTCAATCTACGATAGTTATTTCCAGCCTAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004438 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009987 GO:0009991 GO:0010035 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0023052 GO:0030258 GO:0031410 GO:0031668 GO:0031982 GO:0033554 GO:0034593 GO:0035556 GO:0042221 GO:0042578 GO:0042631 GO:0043226 GO:0043227 GO:0043229 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046486 GO:0046488 GO:0046839 GO:0046856 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0052629 GO:0052744 GO:0052866 GO:0065007 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071704 GO:0080134 GO:0097708 GO:0104004 GO:0106018 GO:1901700 GO:1901701 GO:2000070

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04070 map00562 map01100 map04070

Pfam Domains

Protein Families

Myotub-related

Protein Analysis

857

Amino Acids

94.46

Weight (kDa)

7.52

Isoelectric Point (pI)

50.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myotub-related	PF06602	3 - 193	1.2e-65	Myotubularin-like phosphatase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013401)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10550 AT5G04540
fragaria_vesca	FvH4_7g06400
malus_domestica	MD02G1244600.v1.1 MD07G1072600.v1.1
prunus_persica	Prupe.2G090700_v2.0.a1 Prupe.2G090700_v2.0.a1
pyrus_communis	pycom02g21050 pycom07g05570
rosa_chinensis	RchiOBHm_Chr1g0334491
rosa_laevigata	RLG00000029449
rosa_roxburghii	Rroxscaffold_4G00316800
rosa_rugosa	Rorug01G0114300
rosa_samantha	Rh1AG139500 Rh1BG105700 Rh1CG131400 Rh1DG143400
rosa_wichuraiana	Rw1G011500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2448
Acc36I	ACCTGC	1 cut(s)	2448
Acc65I	GGTACC	1 cut(s)	1795
AccB1I	GGYRCC	2 cut(s)	140, 1795
AccB7I	CCANNNNNTGG	1 cut(s)	2471
AccBSI	CCGCTC	1 cut(s)	11
AciI	CCGC	9 cut(s)	9, 30, 299, 577, 1672, 1744, 1949, 2145, 2238
AclWI	GGATC	7 cut(s)	528, 760, 1382, 1569, 1582, 1725, 1880
AcoI	YGGCCR	4 cut(s)	31, 1450, 1946, 2462
AcsI	RAATTY	5 cut(s)	40, 157, 691, 1753, 2030
AcuI	CTGAAG	2 cut(s)	389, 2528
AcyI	GRCGYC	2 cut(s)	96, 141
AfaI	GTAC	8 cut(s)	472, 499, 1132, 1326, 1402, 1498, 1797, 2223
AfiI	CCNNNNNNNGG	6 cut(s)	26, 105, 830, 866, 1749, 2471
AflIII	ACRYGT	3 cut(s)	494, 1252, 1294
AjnI	CCWGG	3 cut(s)	136, 1416, 1710
AjuI	GAANNNNNNNTTGG	2 cut(s)	1513, 1545
AleI	CACNNNNGTG	1 cut(s)	2212
Alw21I	GWGCWC	3 cut(s)	1869, 2001, 2482
Alw26I	GTCTC	5 cut(s)	127, 151, 460, 1104, 1227
Alw44I	GTGCAC	1 cut(s)	1865
AlwI	GGATC	7 cut(s)	528, 760, 1382, 1569, 1582, 1725, 1880
AlwNI	CAGNNNCTG	2 cut(s)	1925, 2471
Ama87I	CYCGRG	1 cut(s)	2409
AoxI	GGCC	9 cut(s)	3, 31, 78, 541, 1450, 1946, 2184, 2462, 2511
ApaLI	GTGCAC	1 cut(s)	1865
ApeKI	GCWGC	8 cut(s)	914, 1289, 1922, 1925, 2139, 2235, 2394, 2454
ApoI	RAATTY	5 cut(s)	40, 157, 691, 1753, 2030
ArsI	GACNNNNNNTTYG	2 cut(s)	2300, 2332
AseI	ATTAAT	1 cut(s)	1667
Asp718I	GGTACC	1 cut(s)	1795
AspLEI	GCGC	2 cut(s)	143, 1842
AspS9I	GGNCC	4 cut(s)	108, 237, 542, 1904
AsuC2I	CCSGG	1 cut(s)	50
AsuHPI	GGTGA	4 cut(s)	241, 1545, 2077, 2525
AsuII	TTCGAA	1 cut(s)	2306
AsuNHI	GCTAGC	1 cut(s)	1441
AvaI	CYCGRG	1 cut(s)	2409
AvaII	GGWCC	3 cut(s)	108, 237, 1904
AxyI	CCTNAGG	1 cut(s)	1163
BaeGI	GKGCMC	1 cut(s)	1869
BalI	TGGCCA	2 cut(s)	1452, 2464
BamHI	GGATCC	1 cut(s)	1574
BanI	GGYRCC	2 cut(s)	140, 1795
BanII	GRGCYC	2 cut(s)	90, 2001
BarI	GAAGNNNNNNTAC	2 cut(s)	1198, 1230
BbsI	GAAGAC	1 cut(s)	254
Bbv12I	GWGCWC	3 cut(s)	1869, 2001, 2482
BbvI	GCAGC	8 cut(s)	901, 1276, 1912, 1934, 2151, 2247, 2406, 2441
BceAI	ACGGC	1 cut(s)	128
BciT130I	CCWGG	3 cut(s)	138, 1418, 1712
BciVI	GTATCC	1 cut(s)	1689
BclI	TGATCA	1 cut(s)	2530
BcnI	CCSGG	1 cut(s)	50
BcoDI	GTCTC	5 cut(s)	127, 151, 460, 1104, 1227
BfaI	CTAG	4 cut(s)	285, 696, 1442, 2210
BfmI	CTRYAG	4 cut(s)	804, 1640, 2330, 2455
BfoI	RGCGCY	1 cut(s)	144
BfuAI	ACCTGC	1 cut(s)	2448
BfuI	GTATCC	1 cut(s)	1689
BlpI	GCTNAGC	1 cut(s)	180
Bme1390I	CCNGG	4 cut(s)	50, 138, 1418, 1712
Bme18I	GGWCC	3 cut(s)	108, 237, 1904
BmeT110I	CYCGRG	1 cut(s)	2409
BmgT120I	GGNCC	4 cut(s)	108, 237, 542, 1904
BmiI	GGNNCC	6 cut(s)	142, 238, 616, 1415, 1576, 1797
BmrFI	CCNGG	4 cut(s)	50, 138, 1418, 1712
BmrI	ACTGGG	2 cut(s)	93, 1545
BmsI	GCATC	5 cut(s)	472, 958, 1322, 1802, 2458
BmtI	GCTAGC	1 cut(s)	1445
BmuI	ACTGGG	2 cut(s)	93, 1545
BpiI	GAAGAC	1 cut(s)	254
BplI	GAGNNNNNCTC	2 cut(s)	107, 139
BpmI	CTGGAG	2 cut(s)	1902, 2013
Bpu1102I	GCTNAGC	1 cut(s)	180
Bpu14I	TTCGAA	1 cut(s)	2306
BpuEI	CTTGAG	2 cut(s)	1572, 1971
BpuMI	CCSGG	1 cut(s)	50
BsaHI	GRCGYC	2 cut(s)	96, 141
BsaI	GGTCTC	1 cut(s)	127
BsaJI	CCNNGG	2 cut(s)	977, 1520
BsaXI	ACNNNNNCTCC	2 cut(s)	667, 697
Bsc4I	CCNNNNNNNGG	6 cut(s)	26, 105, 830, 866, 1749, 2471
Bse118I	RCCGGY	1 cut(s)	118
Bse1I	ACTGG	4 cut(s)	88, 940, 1042, 1540
Bse21I	CCTNAGG	1 cut(s)	1163
Bse3DI	GCAATG	3 cut(s)	1011, 1089, 1327
BseBI	CCWGG	3 cut(s)	138, 1418, 1712
BseDI	CCNNGG	2 cut(s)	977, 1520
BseGI	GGATG	9 cut(s)	820, 851, 1074, 1150, 1181, 1346, 1680, 1817, 2029
BseLI	CCNNNNNNNGG	6 cut(s)	26, 105, 830, 866, 1749, 2471
BseMI	GCAATG	3 cut(s)	1011, 1089, 1327
BseMII	CTCAG	9 cut(s)	171, 263, 1011, 1038, 1120, 1154, 1370, 1503, 1992
BseNI	ACTGG	4 cut(s)	88, 940, 1042, 1540
BseRI	GAGGAG	1 cut(s)	901
BseSI	GKGCMC	1 cut(s)	1869
BseX3I	CGGCCG	1 cut(s)	31
BseXI	GCAGC	8 cut(s)	901, 1276, 1912, 1934, 2151, 2247, 2406, 2441
BsgI	GTGCAG	2 cut(s)	1275, 2130
Bsh1285I	CGRYCG	1 cut(s)	34
BshFI	GGCC	9 cut(s)	5, 33, 80, 543, 1452, 1948, 2186, 2464, 2513
BshNI	GGYRCC	2 cut(s)	140, 1795
BsiEI	CGRYCG	1 cut(s)	34
BsiHKAI	GWGCWC	3 cut(s)	1869, 2001, 2482
BsiHKCI	CYCGRG	1 cut(s)	2409
BsiSI	CCGG	3 cut(s)	27, 49, 119
BslFI	GGGAC	4 cut(s)	65, 107, 250, 1959
BslI	CCNNNNNNNGG	6 cut(s)	26, 105, 830, 866, 1749, 2471
BsmAI	GTCTC	5 cut(s)	127, 151, 460, 1104, 1227
BsmBI	CGTCTC	2 cut(s)	151, 460
BsmFI	GGGAC	4 cut(s)	65, 107, 250, 1959
BsnI	GGCC	9 cut(s)	5, 33, 80, 543, 1452, 1948, 2186, 2464, 2513
Bso31I	GGTCTC	1 cut(s)	127
BsoBI	CYCGRG	1 cut(s)	2409
Bsp119I	TTCGAA	1 cut(s)	2306
Bsp1286I	GDGCHC	4 cut(s)	90, 1869, 2001, 2482
Bsp1407I	TGTACA	1 cut(s)	1324
Bsp1720I	GCTNAGC	1 cut(s)	180
BspACI	CCGC	9 cut(s)	9, 30, 299, 577, 1672, 1744, 1949, 2145, 2238
BspANI	GGCC	9 cut(s)	5, 33, 80, 543, 1452, 1948, 2186, 2464, 2513
BspCNI	CTCAG	9 cut(s)	172, 264, 1012, 1039, 1119, 1155, 1369, 1504, 1991
BspHI	TCATGA	1 cut(s)	873
BspLI	GGNNCC	6 cut(s)	142, 238, 616, 1415, 1576, 1797
BspMAI	CTGCAG	3 cut(s)	1644, 2334, 2459
BspMI	ACCTGC	1 cut(s)	2448
BspOI	GCTAGC	1 cut(s)	1445
BspPI	GGATC	7 cut(s)	528, 760, 1382, 1569, 1582, 1725, 1880
BspQI	GCTCTTC	1 cut(s)	1849
BspT104I	TTCGAA	1 cut(s)	2306
BspT107I	GGYRCC	2 cut(s)	140, 1795
BspTNI	GGTCTC	1 cut(s)	127
BsrBI	CCGCTC	1 cut(s)	11
BsrDI	GCAATG	3 cut(s)	1011, 1089, 1327
BsrFI	RCCGGY	1 cut(s)	118
BsrGI	TGTACA	1 cut(s)	1324
BsrI	ACTGG	4 cut(s)	88, 940, 1042, 1540
BssAI	RCCGGY	1 cut(s)	118
BssECI	CCNNGG	2 cut(s)	977, 1520
BssNI	GRCGYC	2 cut(s)	96, 141
BssT1I	CCWWGG	1 cut(s)	1520
Bst2UI	CCWGG	3 cut(s)	138, 1418, 1712
Bst4CI	ACNGT	7 cut(s)	475, 557, 1238, 2205, 2251, 2316, 2371
Bst6I	CTCTTC	1 cut(s)	1849
BstACI	GRCGYC	2 cut(s)	96, 141
BstAUI	TGTACA	1 cut(s)	1324
BstBI	TTCGAA	1 cut(s)	2306
BstC8I	GCNNGC	8 cut(s)	170, 507, 511, 1443, 1478, 1482, 2441, 2473
BstDSI	CCRYGG	1 cut(s)	977
BstF5I	GGATG	9 cut(s)	820, 851, 1074, 1150, 1181, 1346, 1680, 1817, 2029
BstH2I	RGCGCY	1 cut(s)	144
BstHHI	GCGC	2 cut(s)	143, 1842
BstMAI	GTCTC	5 cut(s)	127, 151, 460, 1104, 1227
BstMCI	CGRYCG	1 cut(s)	34
BstNI	CCWGG	3 cut(s)	138, 1418, 1712
BstNSI	RCATGY	5 cut(s)	498, 1256, 1480, 1819, 2443
BstSCI	CCNGG	4 cut(s)	48, 136, 1416, 1710
BstSFI	CTRYAG	4 cut(s)	804, 1640, 2330, 2455
BstSLI	GKGCMC	1 cut(s)	1869
BstV1I	GCAGC	8 cut(s)	901, 1276, 1912, 1934, 2151, 2247, 2406, 2441
BstV2I	GAAGAC	1 cut(s)	254
BstX2I	RGATCY	3 cut(s)	520, 1574, 1717
BstXI	CCANNNNNNTGG	3 cut(s)	1944, 2095, 2501
BstYI	RGATCY	3 cut(s)	520, 1574, 1717
BstZI	CGGCCG	1 cut(s)	31
Bsu36I	CCTNAGG	1 cut(s)	1163
BsuI	GTATCC	1 cut(s)	1689
BsuRI	GGCC	9 cut(s)	5, 33, 80, 543, 1452, 1948, 2186, 2464, 2513
BtgI	CCRYGG	1 cut(s)	977
BtgZI	GCGATG	1 cut(s)	1978
BtsCI	GGATG	9 cut(s)	820, 851, 1074, 1150, 1181, 1346, 1680, 1817, 2029
BtsI	GCAGTG	2 cut(s)	1339, 1649
BtsIMutI	CAGTG	6 cut(s)	81, 1243, 1339, 1649, 1889, 2247
BveI	ACCTGC	1 cut(s)	2448
Cac8I	GCNNGC	8 cut(s)	170, 507, 511, 1443, 1478, 1482, 2441, 2473
CaiI	CAGNNNCTG	2 cut(s)	1925, 2471
CciI	TCATGA	1 cut(s)	873
CfoI	GCGC	2 cut(s)	143, 1842
Cfr10I	RCCGGY	1 cut(s)	118
Cfr13I	GGNCC	4 cut(s)	108, 237, 542, 1904
CseI	GACGC	2 cut(s)	104, 612
Csp6I	GTAC	8 cut(s)	471, 498, 1131, 1325, 1401, 1497, 1796, 2222
CspCI	CAANNNNNGTGG	2 cut(s)	2040, 2075
CviQI	GTAC	8 cut(s)	471, 498, 1131, 1325, 1401, 1497, 1796, 2222
DinI	GGCGCC	1 cut(s)	142
DraI	TTTAAA	1 cut(s)	1407
EaeI	YGGCCR	4 cut(s)	31, 1450, 1946, 2462
EagI	CGGCCG	1 cut(s)	31
Eam1104I	CTCTTC	1 cut(s)	1849
EarI	CTCTTC	1 cut(s)	1849
Ecl136II	GAGCTC	1 cut(s)	1999
EclXI	CGGCCG	1 cut(s)	31
Eco130I	CCWWGG	1 cut(s)	1520
Eco24I	GRGCYC	2 cut(s)	90, 2001
Eco31I	GGTCTC	1 cut(s)	127
Eco47I	GGWCC	3 cut(s)	108, 237, 1904
Eco52I	CGGCCG	1 cut(s)	31
Eco53kI	GAGCTC	1 cut(s)	1999
Eco57I	CTGAAG	2 cut(s)	389, 2528
Eco81I	CCTNAGG	1 cut(s)	1163
Eco88I	CYCGRG	1 cut(s)	2409
EcoICRI	GAGCTC	1 cut(s)	1999
EcoO109I	RGGNCCY	1 cut(s)	237
EcoRII	CCWGG	3 cut(s)	136, 1416, 1710
EcoT14I	CCWWGG	1 cut(s)	1520
EcoT22I	ATGCAT	2 cut(s)	487, 1817
EcoT38I	GRGCYC	2 cut(s)	90, 2001
EgeI	GGCGCC	1 cut(s)	142
EheI	GGCGCC	1 cut(s)	142
ErhI	CCWWGG	1 cut(s)	1520
Esp3I	CGTCTC	2 cut(s)	151, 460
FalI	AAGNNNNNCTT	4 cut(s)	1513, 1545, 2501, 2533
FaqI	GGGAC	4 cut(s)	65, 107, 250, 1959
FauI	CCCGC	2 cut(s)	306, 1751
FbaI	TGATCA	1 cut(s)	2530
FokI	GGATG	9 cut(s)	807, 838, 1061, 1157, 1188, 1353, 1687, 1824, 2036
FriOI	GRGCYC	2 cut(s)	90, 2001
FspBI	CTAG	4 cut(s)	285, 696, 1442, 2210
GlaI	GCGC	2 cut(s)	142, 1841
GsuI	CTGGAG	2 cut(s)	1902, 2013
HaeII	RGCGCY	1 cut(s)	144
HaeIII	GGCC	9 cut(s)	5, 33, 80, 543, 1452, 1948, 2186, 2464, 2513
HapII	CCGG	3 cut(s)	27, 49, 119
HgaI	GACGC	2 cut(s)	104, 612
HhaI	GCGC	2 cut(s)	143, 1842
Hin1I	GRCGYC	2 cut(s)	96, 141
Hin6I	GCGC	2 cut(s)	141, 1840
HinP1I	GCGC	2 cut(s)	141, 1840
HincII	GTYRAC	2 cut(s)	1224, 2254
HindII	GTYRAC	2 cut(s)	1224, 2254
HindIII	AAGCTT	3 cut(s)	771, 905, 1803
HinfI	GANTC	6 cut(s)	53, 62, 355, 385, 1022, 1307
HpaII	CCGG	3 cut(s)	27, 49, 119
HphI	GGTGA	4 cut(s)	241, 1545, 2077, 2525
Hpy166II	GTNNAC	4 cut(s)	1224, 1867, 1907, 2254
Hpy188III	TCNNGA	5 cut(s)	393, 874, 1162, 1304, 2161
Hpy8I	GTNNAC	4 cut(s)	1224, 1867, 1907, 2254
HpyAV	CCTTC	8 cut(s)	272, 283, 555, 942, 1518, 1588, 2041, 2503
HpyCH4III	ACNGT	7 cut(s)	475, 557, 1238, 2205, 2251, 2316, 2371
HpyCH4IV	ACGT	3 cut(s)	469, 847, 1296
HpySE526I	ACGT	3 cut(s)	469, 847, 1296
Hsp92I	GRCGYC	2 cut(s)	96, 141
HspAI	GCGC	2 cut(s)	141, 1840
KasI	GGCGCC	1 cut(s)	140
KpnI	GGTACC	1 cut(s)	1799
Ksp22I	TGATCA	1 cut(s)	2530
LguI	GCTCTTC	1 cut(s)	1849
LmnI	GCTCC	8 cut(s)	16, 29, 134, 620, 833, 1597, 2147, 2284
Lsp1109I	GCAGC	8 cut(s)	901, 1276, 1912, 1934, 2151, 2247, 2406, 2441
LweI	GCATC	5 cut(s)	472, 958, 1322, 1802, 2458
MaeI	CTAG	4 cut(s)	285, 696, 1442, 2210
MaeII	ACGT	3 cut(s)	469, 847, 1296
MaeIII	GTNAC	9 cut(s)	247, 490, 557, 579, 698, 808, 890, 1515, 2205
MbiI	CCGCTC	1 cut(s)	11
MboII	GAAGA	9 cut(s)	254, 408, 653, 770, 1020, 1521, 1836, 2292, 2295
MfeI	CAATTG	3 cut(s)	324, 2403, 2483
MflI	RGATCY	3 cut(s)	520, 1574, 1717
MhlI	GDGCHC	4 cut(s)	90, 1869, 2001, 2482
MlsI	TGGCCA	2 cut(s)	1452, 2464
MluNI	TGGCCA	2 cut(s)	1452, 2464
Mly113I	GGCGCC	1 cut(s)	141
MlyI	GAGTC	4 cut(s)	47, 56, 379, 1031
MmeI	TCCRAC	1 cut(s)	90
Mox20I	TGGCCA	2 cut(s)	1452, 2464
Mph1103I	ATGCAT	2 cut(s)	487, 1817
MscI	TGGCCA	2 cut(s)	1452, 2464
MseI	TTAA	4 cut(s)	1247, 1406, 1667, 2105
MslI	CAYNNNNRTG	3 cut(s)	1332, 2093, 2212
Msp20I	TGGCCA	2 cut(s)	1452, 2464
MspA1I	CMGCKG	3 cut(s)	1360, 1925, 2238
MspI	CCGG	3 cut(s)	27, 49, 119
MspR9I	CCNGG	4 cut(s)	50, 138, 1418, 1712
MunI	CAATTG	3 cut(s)	324, 2403, 2483
MvaI	CCWGG	3 cut(s)	138, 1418, 1712
NarI	GGCGCC	1 cut(s)	141
NciI	CCSGG	1 cut(s)	50
NheI	GCTAGC	1 cut(s)	1441
NlaIV	GGNNCC	6 cut(s)	142, 238, 616, 1415, 1576, 1797
NmeAIII	GCCGAG	1 cut(s)	1081
NmuCI	GTSAC	2 cut(s)	247, 2205
NsiI	ATGCAT	2 cut(s)	487, 1817
NspI	RCATGY	5 cut(s)	498, 1256, 1480, 1819, 2443
NspV	TTCGAA	1 cut(s)	2306
OliI	CACNNNNGTG	1 cut(s)	2212
PaeI	GCATGC	2 cut(s)	1480, 2443
PaeR7I	CTCGAG	1 cut(s)	2409
PagI	TCATGA	1 cut(s)	873
PaqCI	CACCTGC	1 cut(s)	2448
PciI	ACATGT	2 cut(s)	494, 1252
PciSI	GCTCTTC	1 cut(s)	1849
PcsI	WCGNNNNNNNCGW	1 cut(s)	2265
PfeI	GAWTC	2 cut(s)	355, 1307
PflMI	CCANNNNNTGG	1 cut(s)	2471
PfoI	TCCNGGA	1 cut(s)	48
PleI	GAGTC	4 cut(s)	47, 56, 379, 1030
PluTI	GGCGCC	1 cut(s)	144
PpsI	GAGTC	4 cut(s)	47, 56, 379, 1030
PpuMI	RGGWCCY	1 cut(s)	237
PscI	ACATGT	2 cut(s)	494, 1252
PshBI	ATTAAT	1 cut(s)	1667
Psp124BI	GAGCTC	1 cut(s)	2001
Psp5II	RGGWCCY	1 cut(s)	237
Psp6I	CCWGG	3 cut(s)	136, 1416, 1710
PspGI	CCWGG	3 cut(s)	136, 1416, 1710
PspN4I	GGNNCC	6 cut(s)	142, 238, 616, 1415, 1576, 1797
PspPI	GGNCC	4 cut(s)	108, 237, 542, 1904
PspPPI	RGGWCCY	1 cut(s)	237
PspXI	VCTCGAGB	1 cut(s)	2409
PstI	CTGCAG	3 cut(s)	1644, 2334, 2459
PstNI	CAGNNNCTG	2 cut(s)	1925, 2471
PsuI	RGATCY	3 cut(s)	520, 1574, 1717
PvuII	CAGCTG	2 cut(s)	1360, 1925
RsaI	GTAC	8 cut(s)	472, 499, 1132, 1326, 1402, 1498, 1797, 2223
RsaNI	GTAC	8 cut(s)	471, 498, 1131, 1325, 1401, 1497, 1796, 2222
RseI	CAYNNNNRTG	3 cut(s)	1332, 2093, 2212
SacI	GAGCTC	1 cut(s)	2001
SapI	GCTCTTC	1 cut(s)	1849
SaqAI	TTAA	4 cut(s)	1247, 1406, 1667, 2105
Sau96I	GGNCC	4 cut(s)	108, 237, 542, 1904
SchI	GAGTC	4 cut(s)	47, 56, 379, 1031
ScrFI	CCNGG	4 cut(s)	50, 138, 1418, 1712
SduI	GDGCHC	4 cut(s)	90, 1869, 2001, 2482
SfaNI	GCATC	5 cut(s)	472, 958, 1322, 1802, 2458
SfcI	CTRYAG	4 cut(s)	804, 1640, 2330, 2455
SfoI	GGCGCC	1 cut(s)	142
Sfr274I	CTCGAG	1 cut(s)	2409
SfuI	TTCGAA	1 cut(s)	2306
SinI	GGWCC	3 cut(s)	108, 237, 1904
SlaI	CTCGAG	1 cut(s)	2409
SmiMI	CAYNNNNRTG	3 cut(s)	1332, 2093, 2212
SmlI	CTYRAG	3 cut(s)	1587, 1986, 2409
SmoI	CTYRAG	3 cut(s)	1587, 1986, 2409
SphI	GCATGC	2 cut(s)	1480, 2443
SsiI	CCGC	9 cut(s)	9, 30, 299, 577, 1672, 1744, 1949, 2145, 2238
SspDI	GGCGCC	1 cut(s)	140
SspMI	CTAG	4 cut(s)	285, 696, 1442, 2210
SstI	GAGCTC	1 cut(s)	2001
StyD4I	CCNGG	4 cut(s)	48, 136, 1416, 1710
StyI	CCWWGG	1 cut(s)	1520
TaaI	ACNGT	7 cut(s)	475, 557, 1238, 2205, 2251, 2316, 2371
TaiI	ACGT	3 cut(s)	472, 850, 1299
TaqI	TCGA	6 cut(s)	102, 1468, 2001, 2259, 2306, 2410
TatI	WGTACW	2 cut(s)	1324, 1496
TauI	GCSGC	2 cut(s)	33, 1951
TfiI	GAWTC	2 cut(s)	355, 1307
Tru1I	TTAA	4 cut(s)	1247, 1406, 1667, 2105
Tru9I	TTAA	4 cut(s)	1247, 1406, 1667, 2105
TscAI	CASTG	6 cut(s)	88, 1243, 1339, 1649, 1896, 2254
TseFI	GTSAC	2 cut(s)	247, 2205
TseI	GCWGC	8 cut(s)	914, 1289, 1922, 1925, 2139, 2235, 2394, 2454
Tsp45I	GTSAC	2 cut(s)	247, 2205
TspDTI	ATGAA	8 cut(s)	771, 840, 893, 915, 1128, 2139, 2165, 2204
TspGWI	ACGGA	4 cut(s)	121, 773, 994, 1207
TspRI	CASTG	6 cut(s)	88, 1243, 1339, 1649, 1896, 2254
Van91I	CCANNNNNTGG	1 cut(s)	2471
VneI	GTGCAC	1 cut(s)	1865
VpaK11BI	GGWCC	3 cut(s)	108, 237, 1904
VspI	ATTAAT	1 cut(s)	1667
XapI	RAATTY	5 cut(s)	40, 157, 691, 1753, 2030
XceI	RCATGY	5 cut(s)	498, 1256, 1480, 1819, 2443
XcmI	CCANNNNNNNNNTGG	3 cut(s)	513, 863, 2371
XhoI	CTCGAG	1 cut(s)	2409
XspI	CTAG	4 cut(s)	285, 696, 1442, 2210
Zsp2I	ATGCAT	2 cut(s)	487, 1817

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.