AT5G06940

Leucine rich repeat N-terminal domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0006756
Physical Location & Seq
Reverse (-)
2147888 .. 2150771
2884 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G06940.1

Sequence Viewer

Length: 2619 bp
ATGGCTACCAGATTCAAGCACCAGTTTTCAATCTCACTAGCCTTGACATTCTTCTTCTTCTTCACCAAGACCTTCTCTTTCACAGAGAACGAGGAACTTGGTAACCTTCTCAGATTCAAAGCCTCCTTTGATGATCCAAAAGGCTCTCTTTCAGGTTGGTTTAACACTTCTTCTTCGCACCATTGTAACTGGACTGGTATCACATGTACTAGAGCTCCTACTCTTTACGTCTCTTCCATTAACCTTCAAAGTTTGAATCTTTCTGGTGAAATCTCTGACTCCATTTGTGACCTCCCTTACCTCACTCACCTTGACCTCTCCTTGAACTTCTTCAATCAGCCTATCCCACTTCAGTTGTCTCGTTGTGTTACTTTAGAGACTCTTAATCTCAGCTCTAATCTCATCTGGGGCACAATCCCTGATCAGATTTCTGAGTTTAGTTCCTTGAAAGTTATTGACTTTAGCAGTAACCATGTCGAAGGTATGATTCCAGAAGATTTAGGGTTATTGTTTAATCTCCAAGTTCTCAACTTGGGAAGTAATTTGCTCACTGGTATCGTCCCTCCTGCTATTGGGAAGCTAAGTGAGCTTGTTGTTCTTGATTTGTCTGAAAACAGCTATTTGGTTAGTGAGATTCCTTCTTTTCTTGGGAAGCTAGACAAGCTTGAACAGCTTCTGTTGCATAGGTCAGGGTTCCATGGAGAGATTCCTACTTCGTTTGTTGGTTTGACAAGTTTGAGAACCTTGGATCTGAGTTTGAACAACCTGAGTGGTGAGATTCCTCGATCATTAGGCCCTTCTCTCAAGAACTTAGTGTCTCTTGATGTCTCACAGAATAAGTTATCTGGCTCTTTCCCTAGTGGCATTTGCAGTGGTAAAAGGCTTATTAACCTTTCTCTCCACTCGAATTTCTTTGAAGGGTCATTGCCTAACTCCATTGGTGAATGCCTTAGTCTGGAGAGGCTTCAAGTGCAGAACAATGGATTTTCTGGTGAGTTTCCAGTTGTGTTGTGGAAATTACCCAGGATTAAGATTATTAGAGCGGATAATAATCGGTTCACAGGTCAAGTGCCAGAGTCTGTGTCTTTGGCTTCTGCATTGGAGCAAGTTGAGATAGTCAACAATTCCTTTTCTGGTGAAATCCCACATGGTCTTGGATTGGTTAAGAGCTTGTATAAGTTTTCTGCTTCACAAAACCGGTTTAGTGGAGAGTTACCGCCGAATTTTTGCGACTCACCTGTCCTTAGTATTGTAAACATCTCTCACAATAGGCTCTTAGGAAAGATCCCAGAACTGAAAAACTGCAAGAAGCTTGTCTCTTTGTCTCTAGCAGGCAATGCATTCACCGGAGAAATCCCGCCATCACTTGCTGATTTACATGTTCTGACCTATCTTGATCTATCTGATAATAGTCTTACTGGTTTGATCCCTCAAGGCTTACAGAACCTAAAGCTTGCTCTTTTTAACGTGTCATTCAATGGATTATCAGGTGAGGTACCTCACTCTCTGGTCTCCGGGTTACCAGCTTCCTTTCTGCAAGGAAATCCTGAGCTTTGTGGACCCGGTTTACCCAATTCTTGCTCCTCTGATCGGTCTAACTTCCATAAAAAAGGTGGTAAAGCGTTGGTGTTATCTTTGATATGTTTAGCACTTGCTATTGCCACTTTCCTTGCGGTGTTATATCGTTATTCTCGAAAGAAAGTGCAATTCAAGAGTACTTGGCGCTCGGAGTTTTATTATCCCTTCAAGTTAACTGAGCATGAGTTGATGAAAGTGGTGAATGAAAGTTGTCCTTCCGGAAGTGAAGTATACGTTCTCAGTTTATCTAGTGGGGAGTTATTAGCTGTGAAGAAGCTTGTGAATTCTAAGAATATATCCTCGAAATCTCTGAAAGCTCAAGTGAGAACCATAGCAAAGATACGGCATAAGAACATTACTCGAATTCTTGGGTTTTGCTTCAAAGACGAGATGATCTTCTTGATCTATGAATTCACACAAAATGGTAGCTTACATGATATGCTATCGAGAGCTGGCGACCAACTGCCGTGGAGTATTAGGTTGAAGATAGCACTAGGTGTTGCTCAAGCATTGGCTTACATTAGCAAAGACTATGTGCCACACTTACTCCATAGGAACCTAAAATCAGCAAACATTTTCTTGGACAAAGATTTCGAACCCAAGCTCTCTGATTTTGCTCTTGACCATATCGTTGGAGAAACTGCTTTTCAGTCTCTGGTACATGCAAACACCAACTCCTGCTATACTGCACCAGAAAACCATTACAGCAAGAAAGCAACAGAAGATATGGATGTTTACAGTTTTGGTGTTGTATTACTAGAACTTGTAACGGGACAAAGCGCAGAGAAAGCAGAAGAAGGCTCTTCTGGGGAGTCCCTTGACATAGTGAAGCAGGTCAGGAGGAAGATAAACCTGACAGATGGAGCTGCACAAGTTCTTGACCAAAAGATCTTGTCCGATTCTTGCCAATCAGACATGCGAAAGACCTTAGACATTGCTCTAGATTGCACCGCCGTTGCTGCAGAGAAACGACCTTCACTGGTTAAAGTTATTAAACTGCTTGAGGGTATTAGTTCTTCTGTCTCACCAGTTTCCGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase_Tyr

Protein Analysis

872

Amino Acids

95.68

Weight (kDa)

6.87

Isoelectric Point (pI)

35.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 30 - 70 5.1e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 142 - 251 4.5e-10 Leucine-rich repeat region
LRR_14 PF23598 243 - 400 4.8e-06 Leucine-rich repeat region
Pkinase PF00069 603 - 857 2e-29 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 613 - 858 1.1e-33 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1238
Acc36I ACCTGC 1 cut(s) 2401
Acc65I GGTACC 1 cut(s) 1495
AccB1I GGYRCC 1 cut(s) 1495
AccBSI CCGCTC 1 cut(s) 1043
AccI GTMKAC 1 cut(s) 1809
AccIII TCCGGA 1 cut(s) 1796
AciI CCGC 6 cut(s) 1043, 1217, 1358, 1673, 2529, 2613
AclWI GGATC 4 cut(s) 128, 756, 1279, 1420
AcsI RAATTY 5 cut(s) 907, 1222, 1861, 1941, 1988
AcuI CTGAAG 1 cut(s) 335
AdeI CACNNNGTG 1 cut(s) 2075
AfaI GTAC 4 cut(s) 208, 1497, 1717, 2238
AfiI CCNNNNNNNGG 3 cut(s) 572, 955, 1590
AflIII ACRYGT 3 cut(s) 203, 1378, 1467
AgeI ACCGGT 1 cut(s) 1197
AjnI CCWGG 1 cut(s) 1022
Alw21I GWGCWC 1 cut(s) 217
AlwI GGATC 4 cut(s) 128, 756, 1279, 1420
AlwNI CAGNNNCTG 3 cut(s) 676, 1079, 2233
Aor13HI TCCGGA 1 cut(s) 1796
AoxI GGCC 1 cut(s) 793
ApeKI GCWGC 2 cut(s) 2444, 2537
ApoI RAATTY 5 cut(s) 907, 1222, 1861, 1941, 1988
ArsI GACNNNNNNTTYG 2 cut(s) 2153, 2185
AsiGI ACCGGT 1 cut(s) 1197
Asp700I GAANNNNTTC 2 cut(s) 329, 672
Asp718I GGTACC 1 cut(s) 1495
AspLEI GCGC 2 cut(s) 1725, 2360
AspS9I GGNCC 2 cut(s) 794, 1559
AsuC2I CCSGG 2 cut(s) 1516, 1563
AsuII TTCGAA 1 cut(s) 2172
AvaII GGWCC 1 cut(s) 1559
BaeGI GKGCMC 1 cut(s) 413
BanI GGYRCC 1 cut(s) 1495
BanII GRGCYC 1 cut(s) 217
BarI GAAGNNNNNNTAC 2 cut(s) 2578, 2610
Bbv12I GWGCWC 1 cut(s) 217
BbvI GCAGC 2 cut(s) 2431, 2524
BccI CCATC 2 cut(s) 1369, 2432
BceAI ACGGC 3 cut(s) 1937, 2029, 2516
BciT130I CCWGG 1 cut(s) 1024
BclI TGATCA 1 cut(s) 421
BcnI CCSGG 2 cut(s) 1516, 1563
BfaI CTAG 9 cut(s) 38, 210, 656, 858, 1328, 1827, 2072, 2336, 2519
BfmI CTRYAG 1 cut(s) 2538
BfoI RGCGCY 1 cut(s) 1726
BfuAI ACCTGC 1 cut(s) 2401
BglII AGATCT 1 cut(s) 2466
BisI GCNGC 2 cut(s) 2445, 2538
BlsI GCNGC 2 cut(s) 2446, 2539
BmcAI AGTACT 1 cut(s) 1717
Bme1390I CCNGG 3 cut(s) 1024, 1516, 1563
Bme18I GGWCC 1 cut(s) 1559
BmgT120I GGNCC 2 cut(s) 794, 1559
BmiI GGNNCC 4 cut(s) 695, 1497, 1561, 2135
BmrFI CCNGG 3 cut(s) 1024, 1516, 1563
BpmI CTGGAG 1 cut(s) 977
Bpu10I CCTNAGC 1 cut(s) 1548
Bpu14I TTCGAA 1 cut(s) 2172
BpuEI CTTGAG 5 cut(s) 788, 1416, 1881, 2067, 2600
BpuMI CCSGG 2 cut(s) 1516, 1563
BsaBI GATNNNNATC 1 cut(s) 1050
BsaI GGTCTC 1 cut(s) 1516
BsaJI CCNNGG 4 cut(s) 697, 744, 1022, 2045
BsaWI WCCGGW 3 cut(s) 1197, 1346, 1796
BsaXI ACNNNNNCTCC 6 cut(s) 199, 229, 2109, 2139, 2237, 2267
Bsc4I CCNNNNNNNGG 3 cut(s) 572, 955, 1590
Bse118I RCCGGY 1 cut(s) 1197
Bse1I ACTGG 8 cut(s) 22, 194, 199, 556, 1001, 1423, 2562, 2606
Bse3DI GCAATG 3 cut(s) 923, 1342, 2511
Bse8I GATNNNNATC 1 cut(s) 1050
BseAI TCCGGA 1 cut(s) 1796
BseBI CCWGG 1 cut(s) 1024
BseDI CCNNGG 4 cut(s) 697, 744, 1022, 2045
BseGI GGATG 1 cut(s) 2314
BseJI GATNNNNATC 1 cut(s) 1050
BseLI CCNNNNNNNGG 3 cut(s) 572, 955, 1590
BseMI GCAATG 3 cut(s) 923, 1342, 2511
BseMII CTCAG 8 cut(s) 124, 403, 423, 743, 758, 1539, 1746, 1831
BseNI ACTGG 8 cut(s) 22, 194, 199, 556, 1001, 1423, 2562, 2606
BseRI GAGGAG 1 cut(s) 1573
BseSI GKGCMC 1 cut(s) 413
BseXI GCAGC 2 cut(s) 2431, 2524
BsgI GTGCAG 3 cut(s) 992, 2250, 2430
BshFI GGCC 1 cut(s) 795
BshNI GGYRCC 1 cut(s) 1495
BshTI ACCGGT 1 cut(s) 1197
BsiHKAI GWGCWC 1 cut(s) 217
BsiSI CCGG 5 cut(s) 1198, 1347, 1515, 1563, 1797
BslFI GGGAC 3 cut(s) 545, 2364, 2377
BslI CCNNNNNNNGG 3 cut(s) 572, 955, 1590
BsmBI CGTCTC 1 cut(s) 235
BsmFI GGGAC 3 cut(s) 545, 2364, 2377
BsmI GAATGC 2 cut(s) 950, 1340
BsnI GGCC 1 cut(s) 795
Bso31I GGTCTC 1 cut(s) 1516
Bsp119I TTCGAA 1 cut(s) 2172
Bsp1286I GDGCHC 2 cut(s) 217, 413
Bsp13I TCCGGA 1 cut(s) 1796
Bsp19I CCATGG 1 cut(s) 697
BspACI CCGC 6 cut(s) 1043, 1217, 1358, 1673, 2529, 2613
BspANI GGCC 1 cut(s) 795
BspCNI CTCAG 8 cut(s) 123, 402, 424, 744, 759, 1540, 1747, 1830
BspEI TCCGGA 1 cut(s) 1796
BspLI GGNNCC 4 cut(s) 695, 1497, 1561, 2135
BspMAI CTGCAG 1 cut(s) 2542
BspMI ACCTGC 1 cut(s) 2401
BspPI GGATC 4 cut(s) 128, 756, 1279, 1420
BspQI GCTCTTC 1 cut(s) 2386
BspT104I TTCGAA 1 cut(s) 2172
BspT107I GGYRCC 1 cut(s) 1495
BspTNI GGTCTC 1 cut(s) 1516
BsrBI CCGCTC 1 cut(s) 1043
BsrDI GCAATG 3 cut(s) 923, 1342, 2511
BsrFI RCCGGY 1 cut(s) 1197
BsrI ACTGG 8 cut(s) 22, 194, 199, 556, 1001, 1423, 2562, 2606
BssAI RCCGGY 1 cut(s) 1197
BssECI CCNNGG 4 cut(s) 697, 744, 1022, 2045
BssNAI GTATAC 1 cut(s) 1810
BssT1I CCWWGG 2 cut(s) 697, 744
Bst1107I GTATAC 1 cut(s) 1810
Bst2UI CCWGG 1 cut(s) 1024
Bst4CI ACNGT 1 cut(s) 2318
Bst6I CTCTTC 2 cut(s) 238, 2386
BstAPI GCANNNNNTGC 1 cut(s) 1337
BstBI TTCGAA 1 cut(s) 2172
BstC8I GCNNGC 3 cut(s) 1333, 1455, 2032
BstDSI CCRYGG 2 cut(s) 697, 2045
BstEII GGTNACC 2 cut(s) 101, 1518
BstF5I GGATG 1 cut(s) 2314
BstH2I RGCGCY 1 cut(s) 1726
BstHHI GCGC 2 cut(s) 1725, 2360
BstMWI GCNNNNNNNGC 8 cut(s) 586, 661, 670, 679, 970, 1337, 2366, 2537
BstNI CCWGG 1 cut(s) 1024
BstNSI RCATGY 4 cut(s) 207, 1382, 2243, 2497
BstPI GGTNACC 2 cut(s) 101, 1518
BstSCI CCNGG 3 cut(s) 1022, 1514, 1561
BstSFI CTRYAG 1 cut(s) 2538
BstSLI GKGCMC 1 cut(s) 413
BstV1I GCAGC 2 cut(s) 2431, 2524
BstX2I RGATCY 3 cut(s) 748, 1284, 2466
BstXI CCANNNNNNTGG 1 cut(s) 2210
BstYI RGATCY 3 cut(s) 748, 1284, 2466
BstZ17I GTATAC 1 cut(s) 1810
BsuRI GGCC 1 cut(s) 795
BtgI CCRYGG 2 cut(s) 697, 2045
BtsCI GGATG 1 cut(s) 2314
BtsI GCAGTG 1 cut(s) 877
BtsIMutI CAGTG 3 cut(s) 549, 877, 2555
BveI ACCTGC 1 cut(s) 2401
Cac8I GCNNGC 3 cut(s) 1333, 1455, 2032
CaiI CAGNNNCTG 3 cut(s) 676, 1079, 2233
CfoI GCGC 2 cut(s) 1725, 2360
Cfr10I RCCGGY 1 cut(s) 1197
Cfr13I GGNCC 2 cut(s) 794, 1559
Csp6I GTAC 4 cut(s) 207, 1496, 1716, 2237
CspAI ACCGGT 1 cut(s) 1197
CspCI CAANNNNNGTGG 8 cut(s) 336, 371, 751, 786, 1651, 1686, 2027, 2062
CviAII CATG 9 cut(s) 204, 473, 698, 1148, 1379, 1760, 2012, 2240, 2494
CviQI GTAC 4 cut(s) 207, 1496, 1716, 2237
DraIII CACNNNGTG 1 cut(s) 2075
DrdI GACNNNNNNGTC 1 cut(s) 1238
DseDI GACNNNNNNGTC 1 cut(s) 1238
Eam1104I CTCTTC 2 cut(s) 238, 2386
EarI CTCTTC 2 cut(s) 238, 2386
Ecl136II GAGCTC 1 cut(s) 215
Eco130I CCWWGG 2 cut(s) 697, 744
Eco24I GRGCYC 1 cut(s) 217
Eco31I GGTCTC 1 cut(s) 1516
Eco47I GGWCC 1 cut(s) 1559
Eco53kI GAGCTC 1 cut(s) 215
Eco57I CTGAAG 1 cut(s) 335
Eco91I GGTNACC 2 cut(s) 101, 1518
EcoICRI GAGCTC 1 cut(s) 215
EcoO109I RGGNCCY 1 cut(s) 794
EcoO65I GGTNACC 2 cut(s) 101, 1518
EcoRI GAATTC 3 cut(s) 1861, 1941, 1988
EcoRII CCWGG 1 cut(s) 1022
EcoT14I CCWWGG 2 cut(s) 697, 744
EcoT22I ATGCAT 1 cut(s) 1342
EcoT38I GRGCYC 1 cut(s) 217
ErhI CCWWGG 2 cut(s) 697, 744
Esp3I CGTCTC 1 cut(s) 235
FaeI CATG 9 cut(s) 207, 476, 701, 1151, 1382, 1763, 2015, 2243, 2497
FalI AAGNNNNNCTT 4 cut(s) 132, 164, 1777, 1809
FaqI GGGAC 3 cut(s) 545, 2364, 2377
FatI CATG 9 cut(s) 203, 472, 697, 1147, 1378, 1759, 2011, 2239, 2493
FauI CCCGC 1 cut(s) 1365
FbaI TGATCA 1 cut(s) 421
FblI GTMKAC 1 cut(s) 1809
Fnu4HI GCNGC 2 cut(s) 2445, 2538
FokI GGATG 1 cut(s) 2321
FriOI GRGCYC 1 cut(s) 217
Fsp4HI GCNGC 2 cut(s) 2445, 2538
FspBI CTAG 9 cut(s) 38, 210, 656, 858, 1328, 1827, 2072, 2336, 2519
GlaI GCGC 2 cut(s) 1724, 2359
GluI GCNGC 2 cut(s) 2445, 2538
GsuI CTGGAG 1 cut(s) 977
HaeII RGCGCY 1 cut(s) 1726
HaeIII GGCC 1 cut(s) 795
HapII CCGG 5 cut(s) 1198, 1347, 1515, 1563, 1797
HhaI GCGC 2 cut(s) 1725, 2360
Hin1II CATG 9 cut(s) 207, 476, 701, 1151, 1382, 1763, 2015, 2243, 2497
Hin6I GCGC 2 cut(s) 1723, 2358
HinP1I GCGC 2 cut(s) 1723, 2358
HincII GTYRAC 2 cut(s) 1120, 1752
HindII GTYRAC 2 cut(s) 1120, 1752
HindIII AAGCTT 4 cut(s) 662, 1310, 1451, 1853
HpaI GTTAAC 1 cut(s) 1752
HpaII CCGG 5 cut(s) 1198, 1347, 1515, 1563, 1797
Hpy166II GTNNAC 8 cut(s) 1059, 1120, 1255, 1559, 1568, 1752, 1810, 2314
Hpy8I GTNNAC 8 cut(s) 1059, 1120, 1255, 1559, 1568, 1752, 1810, 2314
HpyCH4III ACNGT 1 cut(s) 2318
HpyCH4IV ACGT 3 cut(s) 228, 1467, 1812
HpyF10VI GCNNNNNNNGC 8 cut(s) 586, 661, 670, 679, 970, 1337, 2366, 2537
HpySE526I ACGT 3 cut(s) 228, 1467, 1812
Hsp92II CATG 9 cut(s) 207, 476, 701, 1151, 1382, 1763, 2015, 2243, 2497
HspAI GCGC 2 cut(s) 1723, 2358
Kpn2I TCCGGA 1 cut(s) 1796
KpnI GGTACC 1 cut(s) 1499
Ksp22I TGATCA 1 cut(s) 421
KspAI GTTAAC 1 cut(s) 1752
LguI GCTCTTC 1 cut(s) 2386
LmnI GCTCC 4 cut(s) 220, 1102, 1586, 2441
Lsp1109I GCAGC 2 cut(s) 2431, 2524
MaeI CTAG 9 cut(s) 38, 210, 656, 858, 1328, 1827, 2072, 2336, 2519
MaeII ACGT 3 cut(s) 228, 1467, 1812
MaeIII GTNAC 8 cut(s) 101, 185, 287, 367, 467, 1212, 1518, 2344
MbiI CCGCTC 1 cut(s) 1043
MflI RGATCY 3 cut(s) 748, 1284, 2466
MhlI GDGCHC 2 cut(s) 217, 413
MlyI GAGTC 5 cut(s) 272, 373, 1085, 1226, 2399
MmeI TCCRAC 1 cut(s) 2191
Mph1103I ATGCAT 1 cut(s) 1342
MroI TCCGGA 1 cut(s) 1796
MroXI GAANNNNTTC 2 cut(s) 329, 672
MspI CCGG 5 cut(s) 1198, 1347, 1515, 1563, 1797
MspR9I CCNGG 3 cut(s) 1024, 1516, 1563
Mva1269I GAATGC 2 cut(s) 950, 1340
MvaI CCWGG 1 cut(s) 1024
MwoI GCNNNNNNNGC 8 cut(s) 586, 661, 670, 679, 970, 1337, 2366, 2537
NciI CCSGG 2 cut(s) 1516, 1563
NcoI CCATGG 1 cut(s) 697
NlaIII CATG 9 cut(s) 207, 476, 701, 1151, 1382, 1763, 2015, 2243, 2497
NlaIV GGNNCC 4 cut(s) 695, 1497, 1561, 2135
NmuCI GTSAC 1 cut(s) 287
NsiI ATGCAT 1 cut(s) 1342
NspI RCATGY 4 cut(s) 207, 1382, 2243, 2497
NspV TTCGAA 1 cut(s) 2172
PciI ACATGT 2 cut(s) 203, 1378
PciSI GCTCTTC 1 cut(s) 2386
PcsI WCGNNNNNNNCGW 1 cut(s) 1690
PctI GAATGC 2 cut(s) 950, 1340
PdmI GAANNNNTTC 2 cut(s) 329, 672
PfeI GAWTC 8 cut(s) 12, 114, 256, 487, 634, 706, 778, 2477
PinAI ACCGGT 1 cut(s) 1197
PkrI GCNGC 2 cut(s) 2446, 2539
PleI GAGTC 5 cut(s) 272, 373, 1084, 1226, 2398
PpsI GAGTC 5 cut(s) 272, 373, 1084, 1226, 2398
PscI ACATGT 2 cut(s) 203, 1378
Psp124BI GAGCTC 1 cut(s) 217
Psp6I CCWGG 1 cut(s) 1022
PspEI GGTNACC 2 cut(s) 101, 1518
PspGI CCWGG 1 cut(s) 1022
PspN4I GGNNCC 4 cut(s) 695, 1497, 1561, 2135
PspPI GGNCC 2 cut(s) 794, 1559
PstI CTGCAG 1 cut(s) 2542
PstNI CAGNNNCTG 3 cut(s) 676, 1079, 2233
PsuI RGATCY 3 cut(s) 748, 1284, 2466
RsaI GTAC 4 cut(s) 208, 1497, 1717, 2238
RsaNI GTAC 4 cut(s) 207, 1496, 1716, 2237
SacI GAGCTC 1 cut(s) 217
SapI GCTCTTC 1 cut(s) 2386
SatI GCNGC 2 cut(s) 2445, 2538
Sau96I GGNCC 2 cut(s) 794, 1559
ScaI AGTACT 1 cut(s) 1717
SchI GAGTC 5 cut(s) 272, 373, 1085, 1226, 2399
ScrFI CCNGG 3 cut(s) 1024, 1516, 1563
SduI GDGCHC 2 cut(s) 217, 413
SfcI CTRYAG 1 cut(s) 2538
SfuI TTCGAA 1 cut(s) 2172
SinI GGWCC 1 cut(s) 1559
SmlI CTYRAG 5 cut(s) 803, 1431, 1896, 2082, 2579
SmoI CTYRAG 5 cut(s) 803, 1431, 1896, 2082, 2579
SsiI CCGC 6 cut(s) 1043, 1217, 1358, 1673, 2529, 2613
SspMI CTAG 9 cut(s) 38, 210, 656, 858, 1328, 1827, 2072, 2336, 2519
SstI GAGCTC 1 cut(s) 217
StyD4I CCNGG 3 cut(s) 1022, 1514, 1561
StyI CCWWGG 2 cut(s) 697, 744
TaaI ACNGT 1 cut(s) 2318
TaiI ACGT 3 cut(s) 231, 1470, 1815
TaqI TCGA 8 cut(s) 477, 784, 905, 1693, 1880, 1939, 2024, 2172
TaqII GACCGA 1 cut(s) 1581
TatI WGTACW 2 cut(s) 206, 1715
TfiI GAWTC 8 cut(s) 12, 114, 256, 487, 634, 706, 778, 2477
TscAI CASTG 3 cut(s) 556, 877, 2562
TseFI GTSAC 1 cut(s) 287
TseI GCWGC 2 cut(s) 2444, 2537
Tsp45I GTSAC 1 cut(s) 287
TspDTI ATGAA 3 cut(s) 1784, 1797, 2001
TspRI CASTG 3 cut(s) 556, 877, 2562
VpaK11BI GGWCC 1 cut(s) 1559
XapI RAATTY 5 cut(s) 907, 1222, 1861, 1941, 1988
XbaI TCTAGA 1 cut(s) 2518
XceI RCATGY 4 cut(s) 207, 1382, 2243, 2497
XcmI CCANNNNNNNNNTGG 2 cut(s) 1008, 1610
XmiI GTMKAC 1 cut(s) 1809
XmnI GAANNNNTTC 2 cut(s) 329, 672
XspI CTAG 9 cut(s) 38, 210, 656, 858, 1328, 1827, 2072, 2336, 2519
ZrmI AGTACT 1 cut(s) 1717
Zsp2I ATGCAT 1 cut(s) 1342
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.