Rh3BG241400
NAC Family

Probably inactive leucine-rich repeat receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Forward (+)
22739771 .. 22740106
336 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG241400.1

Sequence Viewer

Length: 336 bp
ATGGATGTGTACAGCTTTGGTGTTGCACTATTGGAGCTAGTGAGGGGTCGGCAAGCGGAGCAAGCATTACAATCTGAGTCTCTCGATATAGTGAAGTGGGTACGACGAAAGGTCAACATTACAAATGGAGAGGTCCAAGTTCTTGATCCCAAGATAACAAGTTCAGCCCAGCAAGAGATGCTAGTAGCTCTAGAAATTACTCTGCATTGCACTTCTGTGATGCCGGAAAAGAGACCATCAATGTCTGAAGTTGTGAAATCACTTCAGTCCCTCGACTCGATGACTCAAACTGCTGTTGTAGACTTTTCTGCCTTCGAGGAGCATTCGGTTGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

111

Amino Acids

12.37

Weight (kDa)

4.92

Isoelectric Point (pI)

59.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 300
AciI CCGC 1 cut(s) 56
AclWI GGATC 1 cut(s) 140
AcuI CTGAAG 2 cut(s) 248, 267
AfaI GTAC 2 cut(s) 11, 102
AhdI GACNNNNNGTC 1 cut(s) 110
AleI CACNNNNGTG 1 cut(s) 215
AluBI AGCT 3 cut(s) 15, 37, 188
AluI AGCT 3 cut(s) 15, 37, 188
Alw26I GTCTC 2 cut(s) 84, 226
AlwI GGATC 1 cut(s) 140
AspS9I GGNCC 1 cut(s) 133
AvaII GGWCC 1 cut(s) 133
BccI CCATC 1 cut(s) 244
BcoDI GTCTC 2 cut(s) 84, 226
BfaI CTAG 3 cut(s) 38, 182, 191
Bme18I GGWCC 1 cut(s) 133
BmeRI GACNNNNNGTC 1 cut(s) 110
BmgT120I GGNCC 1 cut(s) 133
BmsI GCATC 2 cut(s) 168, 210
BsaI GGTCTC 1 cut(s) 226
Bse3DI GCAATG 1 cut(s) 205
BseGI GGATG 1 cut(s) 10
BseMI GCAATG 1 cut(s) 205
BseMII CTCAG 1 cut(s) 66
BseRI GAGGAG 1 cut(s) 332
BseYI CCCAGC 1 cut(s) 168
BsiSI CCGG 1 cut(s) 224
BslFI GGGAC 1 cut(s) 253
BsmAI GTCTC 2 cut(s) 84, 226
BsmFI GGGAC 1 cut(s) 253
BsmI GAATGC 1 cut(s) 322
Bso31I GGTCTC 1 cut(s) 226
Bsp1407I TGTACA 1 cut(s) 9
Bsp143I GATC 1 cut(s) 145
BspACI CCGC 1 cut(s) 56
BspCNI CTCAG 1 cut(s) 67
BspPI GGATC 1 cut(s) 140
BspTNI GGTCTC 1 cut(s) 226
BsrDI GCAATG 1 cut(s) 205
BsrGI TGTACA 1 cut(s) 9
BssMI GATC 1 cut(s) 145
BstAPI GCANNNNNTGC 1 cut(s) 178
BstAUI TGTACA 1 cut(s) 9
BstC8I GCNNGC 2 cut(s) 54, 63
BstDEI CTNAG 1 cut(s) 75
BstF5I GGATG 1 cut(s) 10
BstKTI GATC 1 cut(s) 148
BstMAI GTCTC 2 cut(s) 84, 226
BstMBI GATC 1 cut(s) 145
BstMWI GCNNNNNNNGC 3 cut(s) 58, 62, 178
BtsCI GGATG 1 cut(s) 10
Cac8I GCNNGC 2 cut(s) 54, 63
Cfr13I GGNCC 1 cut(s) 133
Csp6I GTAC 2 cut(s) 10, 101
CviJI RGCY 4 cut(s) 15, 37, 167, 188
CviKI_1 RGCY 4 cut(s) 15, 37, 167, 188
CviQI GTAC 2 cut(s) 10, 101
DdeI CTNAG 1 cut(s) 75
DpnI GATC 1 cut(s) 147
DpnII GATC 1 cut(s) 145
DriI GACNNNNNGTC 1 cut(s) 110
Eam1105I GACNNNNNGTC 1 cut(s) 110
Eco31I GGTCTC 1 cut(s) 226
Eco47I GGWCC 1 cut(s) 133
Eco57I CTGAAG 2 cut(s) 248, 267
FaiI YATR 1 cut(s) 89
FaqI GGGAC 1 cut(s) 253
FblI GTMKAC 1 cut(s) 300
FokI GGATG 1 cut(s) 17
FspBI CTAG 3 cut(s) 38, 182, 191
GsaI CCCAGC 1 cut(s) 172
HapII CCGG 1 cut(s) 224
HincII GTYRAC 1 cut(s) 115
HindII GTYRAC 1 cut(s) 115
HinfI GANTC 3 cut(s) 77, 275, 283
HpaII CCGG 1 cut(s) 224
Hpy166II GTNNAC 3 cut(s) 10, 115, 301
Hpy188I TCNGA 3 cut(s) 76, 247, 335
Hpy188III TCNNGA 3 cut(s) 83, 143, 191
Hpy8I GTNNAC 3 cut(s) 10, 115, 301
Hpy99I CGWCG 1 cut(s) 108
HpyAV CCTTC 1 cut(s) 322
HpyCH4V TGCA 3 cut(s) 26, 205, 210
HpyF10VI GCNNNNNNNGC 3 cut(s) 58, 62, 178
HpyF3I CTNAG 1 cut(s) 75
Kzo9I GATC 1 cut(s) 145
LmnI GCTCC 3 cut(s) 34, 58, 319
LpnPI CCDG 2 cut(s) 182, 237
LweI GCATC 2 cut(s) 168, 210
MaeI CTAG 3 cut(s) 38, 182, 191
MalI GATC 1 cut(s) 147
MboI GATC 1 cut(s) 145
MluCI AATT 1 cut(s) 195
MlyI GAGTC 3 cut(s) 86, 269, 277
MnlI CCTC 4 cut(s) 36, 124, 281, 310
MslI CAYNNNNRTG 1 cut(s) 215
MspI CCGG 1 cut(s) 224
Mva1269I GAATGC 1 cut(s) 322
MwoI GCNNNNNNNGC 3 cut(s) 58, 62, 178
NdeII GATC 1 cut(s) 145
OliI CACNNNNGTG 1 cut(s) 215
PctI GAATGC 1 cut(s) 322
PleI GAGTC 3 cut(s) 85, 269, 277
PpsI GAGTC 3 cut(s) 85, 269, 277
PspFI CCCAGC 1 cut(s) 168
PspPI GGNCC 1 cut(s) 133
RsaI GTAC 2 cut(s) 11, 102
RsaNI GTAC 2 cut(s) 10, 101
RseI CAYNNNNRTG 1 cut(s) 215
Sau3AI GATC 1 cut(s) 145
Sau96I GGNCC 1 cut(s) 133
SchI GAGTC 3 cut(s) 86, 269, 277
SetI ASST 5 cut(s) 17, 39, 114, 135, 190
SfaNI GCATC 2 cut(s) 168, 210
SinI GGWCC 1 cut(s) 133
SmiMI CAYNNNNRTG 1 cut(s) 215
Sse9I AATT 1 cut(s) 195
SsiI CCGC 1 cut(s) 56
SspMI CTAG 3 cut(s) 38, 182, 191
TaqI TCGA 4 cut(s) 84, 273, 278, 315
TasI AATT 1 cut(s) 195
TatI WGTACW 1 cut(s) 9
VpaK11BI GGWCC 1 cut(s) 133
XbaI TCTAGA 1 cut(s) 190
XmiI GTMKAC 1 cut(s) 300
XspI CTAG 3 cut(s) 38, 182, 191
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.