AT5G06970

Plant family of unknown function (DUF810)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0005738
Physical Location & Seq
Reverse (-)
2157970 .. 2166511
8542 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G06970.1

Sequence Viewer

Length: 3306 bp
ATGGAAGAAGAAAATGCTGTCGAGATTCTTCAGAGATATCGCCGGGATAGGCGGAAGCTATTGGATTTTATGTTGGCTGGTAGCTTAATCAAGAAAGTTATAATGCCTCCTGGTGCTGTGACTCTTGACGATGTTGATTTAGATCAAGTTAGTGTTGATTATGTCATTAACTGTGCTAAGAAAGGTGGAATGCTCGAACTCGCTGAAGCGATTCGGGACTATCATGATCACATTGGATTGCCTTATATGAACAGCGTGGGTACTGCTGATGAATTCTTTTTGGCTACAATTCCTGAATCTTCTGGCTCACCTCCAAAAAGGGCCCCACCGCCTATTCCTGTATTAATTTCCTCATCTTCTCCCATGGTTACAAATCCCGAGTGGTGTGAGTCACCATCTGCGCCACCATTGATGCGATCAGAATCTTTTGATTCACCAAAAGCTCAAGAGCTGACTGTTGATGACATTGATGATTTTGAAGACGATGATGATCTTGATGAAGTTGGTAATTTCAGGATCTCTAGGCGGACTGCAAATGATGCTGCTGATCTTGTGCCAAGACTGCCCTCCTTTGCGACTGGTATTACCGATGATGATCTCCGTGAAACTGCATTTGAAATACTTTTGGCTTGCGCTGGAGCTTCAGGAGGTCTCATAGTACCATCAAAAGAGAAAAAGAAGGAGAAAAGCAGGTCTAGGCTGATTAAGAAGCTTGGTCGCAAAAGTGAGAGTGTTTCTCAATCTCAGAGCTCATCAGGATTGGTTTCTCTTTTAGAAATGATGCGGGGCCAAATGGAGATTTCTGAGGCCATGGACATCAGAACAAGACAAGGGTTGCTTAATGCCCTAGCGGGAAAAGTTGGCAAAAGAATGGACAGCCTCCTGGTGCCTTTAGAATTGCTATGTTGCGTGTCTCGTACCGAGTTCTCTGACAAGAAAGCATACTTACGCTGGCAGAAAAGGCAGTTAAACATGTTAGCAGAGGGGCTCATTAACAATCCAGTTGTTGGATTTGGAGAATCAGGTCGTAAGGCAACTGACCTGAAGAGTCTTCTGCTAAGGATTGAAGAATCAGAGTCTCTTCCATCCTCAGCTGGAGAAGTGCAAAGAGCAGAATGTTTAAAATCTCTTAGAGAAGTTGCTATCTCACTTGCTGAGAGACCGGCTCGTGGTGATTTGACGGGTGAAGTCTGCCATTGGGCTGATGGCTATCATTTGAATGTCAGACTATATGAAAAATTGCTTCTCTGTGTCTTTGACATATTGAATGATGGGAAGCTCACAGAGGAAGTTGAAGAAATTCTTGAGCTTTTGAAGTCAACATGGCGTGTTCTCGGAATTACAGAGACCATCCATTACACATGCTATGCTTGGGTTTTGTTTCGACAGTATGTCATTACTAGTGAACGAGGACTTCTGCGACATGCTATTCAGCAGCTGAAGAAGATCCCACTAAAAGAACAACGAGGGCCTCAAGAGCGTTTACACTTGAAAACCTTGAAGTGTAGGGTTGATAATGAAGAGATATCCTTCCTGGAGTCCTTCTTGTCACCTATACGGAGTTGGGCCGATAAGCAGCTGGGCGACTACCATCTGCATTTTGCCGAGGGTTCACTTGTCATGGAGGATACAGTCACAGTTGCAATGATAACTTGGAGGCTCTTGTTGGAGGAATCTGATCGAGCGATGCATTCTAACTCTTCAGATCGAGAGCAAATTGAATCCTACGTTTTATCTTCCATCAAGAATACGTTCACAAGGATGTCACTTGCCATTGATAGATCAGACAGAAATAATGAGCACCATTTGGCATTGCTTGCTGAGGAGACTAAGAAACTTATGAAAAAGGACTCTACCATCTTTATGCCAATTTTATCTCAGAGGCACCCACAGGCAATTGCGTTTTCTGCATCCCTTATTCACAAGCTTTATGGGAACAAGTTGAAACCTTTTCTTGATGGTGCTGAACACTTGACTGAGGACGCTGTCTCTGTTTTTCCTGCGGCTGATAGCCTTGAGCAATATTTACTGGAGTTAATGACTTCTGTCTGCGGAGAGGATACAAGTGGACCTTACTTCAAAAAATTAATTCCATATGAGGTCGAATCCCTCTCTGGCACATTGGTTTTGAGATGGATCAATTCACAACTGGGGAGAATTTTAAGCTGGGTGGAGCGAGCTTATAAACAAGAGCATTGGGACCCAATATCACCTCAACAGCGGTATGGGAGCTCAATTGTCGAAGTTTTCAGGATTGTAGAAGAGACTGTTGATCAATTTTTTGCGCTGAAAGTTCCAATGAGATCCATTGAACTAAGTGCTTTATTTCGTGGCATTGACAATGCATTTCAAGTATATACTAACCATGTCATGGAGAAGCTAGCTAGCAAGGATGATTTGGTTCCACCTGTACCTGTTCTTACTCGTTACAAGAAGGAAACAGCAATCAAGGTTTTTGTTAAGAAGGAACTATTCGACTCAAAACACCTTGATGAGAGAAGGTCGATTAACATTGATGTTCCTGCAACCGCTATGCTTTGCGTTCAGCTCAATACTTTACATTATGCTGTTAGTCAACTGAGCAAGTTAGAAGACAGCATGTGGCTACGCTGGATAGCAAAAAAACCTCGTGAAAAGATTGTCATCAGAAAATCTATGGTTGAGAAATCCAAGAGTTTTAACCAGAAGGAATCTTTTGAGGGGAGTAGAAAAGATATCAATGCAGCTCTGGATCGTATTTGCGAGTTTACTGGAACCAAGATTATCTTCTGCGATTTAAGGGAGCCATTTATTGAAAATTTGTATAAGCCAAATGTTTCTCAATCAAGATTGGAAGGATTAATCGAAGCCCTAGACACGGAACTTGGACAGCTATGTAGTGTCATAATGGAGCCATTGAGGGATCGGATAGTCACCAGCCTGCTCCAAGCATCACTTGATGGGTTGCTTCGTGTACTATTAGATGGAGGCGCGTCTCGTGTATTTCATCCAAGCGAGTCAAAGCTGTTAGAAGAAGATGTAGAGGTCTTAAAGGAATTCTTTATTTCTGGTGGGGATGGACTTCCGAGAGGAGTGGTTGAAAACCAAGTAGCCAGAGTTCGTCTTGTTGTAAAGTTGCACGGATATGAGACACGGGAGCTTATTGATGACTTGAGGTCTAGAAGCAGTCTAGAGATGCAGCAAGGAGGAAAAGGCAAACTTGGAGCGGACACCCAAACATTGGTACGAGTGCTTTGCCACAGAAACGATTCAGAGGCATCTCAGTTTCTGAAAAAACAGTACAAAATCCCAAGATCCCACGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005911 GO:0008150 GO:0009506 GO:0009987 GO:0010118 GO:0016020 GO:0030054 GO:0044424 GO:0044464 GO:0055044 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF810

Protein Analysis

1101

Amino Acids

124.52

Weight (kDa)

5.89

Isoelectric Point (pI)

46.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_PATROL1 PF25761 707 - 1099 2.1e-124 PATROL1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 101, 2184
Acc36I ACCTGC 1 cut(s) 681
AccB1I GGYRCC 2 cut(s) 886, 1884
AccB7I CCANNNNNTGG 3 cut(s) 1007, 2371, 3220
AccBSI CCGCTC 1 cut(s) 3206
AccII CGCG 1 cut(s) 2972
AclWI GGATC 7 cut(s) 524, 1441, 2144, 2298, 2739, 2910, 3288
AcsI RAATTY 5 cut(s) 272, 1299, 2157, 2797, 3035
AcuI CTGAAG 6 cut(s) 14, 225, 627, 1064, 1460, 1686
AfaI GTAC 7 cut(s) 262, 660, 919, 2412, 2955, 3225, 3281
AfiI CCNNNNNNNGG 5 cut(s) 1007, 1169, 2371, 2857, 3220
AflIII ACRYGT 1 cut(s) 972
AhdI GACNNNNNGTC 2 cut(s) 1391, 3154
AhlI ACTAGT 1 cut(s) 1400
AjnI CCWGG 3 cut(s) 109, 882, 1533
AjuI GAANNNNNNNTTGG 2 cut(s) 2750, 2782
Alw21I GWGCWC 3 cut(s) 752, 1803, 2234
AlwI GGATC 7 cut(s) 524, 1441, 2144, 2298, 2739, 2910, 3288
AlwNI CAGNNNCTG 2 cut(s) 1438, 3268
Ama87I CYCGRG 1 cut(s) 377
AoxI GGCC 5 cut(s) 321, 787, 807, 1469, 1566
ApaI GGGCCC 1 cut(s) 325
ApeKI GCWGC 5 cut(s) 542, 1435, 1576, 2723, 3178
ApoI RAATTY 5 cut(s) 272, 1299, 2157, 2797, 3035
AseI ATTAAT 3 cut(s) 344, 2087, 2840
Asp700I GAANNNNTTC 4 cut(s) 210, 1299, 1751, 3247
AspLEI GCGC 4 cut(s) 403, 635, 2287, 2972
AspS9I GGNCC 7 cut(s) 321, 322, 787, 1469, 1566, 2069, 2200
AsuC2I CCSGG 1 cut(s) 44
AsuHPI GGTGA 8 cut(s) 300, 384, 426, 1184, 1196, 1542, 2202, 2905
AsuNHI GCTAGC 2 cut(s) 2380, 2384
AvaI CYCGRG 1 cut(s) 377
AvaII GGWCC 2 cut(s) 2069, 2200
BaeGI GKGCMC 1 cut(s) 325
BanI GGYRCC 2 cut(s) 886, 1884
BanII GRGCYC 4 cut(s) 325, 752, 990, 2234
BauI CACGAG 3 cut(s) 1167, 2628, 2976
BbsI GAAGAC 3 cut(s) 486, 1043, 2598
Bbv12I GWGCWC 3 cut(s) 752, 1803, 2234
BbvCI CCTCAGC 2 cut(s) 1090, 1821
BbvI GCAGC 5 cut(s) 529, 1447, 1588, 2735, 3190
BcgI CGANNNNNNTGC 2 cut(s) 3216, 3250
BciT130I CCWGG 3 cut(s) 111, 884, 1535
BciVI GTATCC 2 cut(s) 1621, 2053
BclI TGATCA 2 cut(s) 226, 2272
BcnI CCSGG 1 cut(s) 44
BcuI ACTAGT 1 cut(s) 1400
BfaI CTAG 9 cut(s) 522, 696, 848, 1401, 2381, 2385, 2852, 3159, 3170
BfuAI ACCTGC 1 cut(s) 681
BfuI GTATCC 2 cut(s) 1621, 2053
BisI GCNGC 6 cut(s) 543, 1436, 1577, 2004, 2724, 3179
BlsI GCNGC 6 cut(s) 544, 1437, 1578, 2005, 2725, 3180
Bme1390I CCNGG 4 cut(s) 44, 111, 884, 1535
Bme18I GGWCC 2 cut(s) 2069, 2200
BmeRI GACNNNNNGTC 2 cut(s) 1391, 3154
BmeT110I CYCGRG 1 cut(s) 377
BmgT120I GGNCC 7 cut(s) 321, 322, 787, 1469, 1566, 2069, 2200
BmrFI CCNGG 4 cut(s) 44, 111, 884, 1535
BmrI ACTGGG 1 cut(s) 2159
BmsI GCATC 8 cut(s) 402, 529, 771, 1677, 1919, 2939, 3165, 3266
BmtI GCTAGC 2 cut(s) 2384, 2388
BmuI ACTGGG 1 cut(s) 2159
BoxI GACNNNNGTC 1 cut(s) 2045
BpiI GAAGAC 3 cut(s) 486, 1043, 2598
BplI GAGNNNNNCTC 4 cut(s) 721, 753, 1150, 1182
BpmI CTGGAG 4 cut(s) 657, 1116, 1556, 2051
Bpu10I CCTNAGC 3 cut(s) 1058, 1090, 1821
BpuEI CTTGAG 5 cut(s) 429, 1325, 1458, 2036, 3172
BpuMI CCSGG 1 cut(s) 44
BsaBI GATNNNNATC 6 cut(s) 141, 421, 489, 594, 1209, 2642
BsaI GGTCTC 3 cut(s) 656, 1153, 1340
BsaJI CCNNGG 4 cut(s) 363, 810, 1605, 3298
Bsc4I CCNNNNNNNGG 5 cut(s) 1007, 1169, 2371, 2857, 3220
Bse118I RCCGGY 1 cut(s) 1162
Bse1I ACTGG 5 cut(s) 583, 1001, 2034, 2154, 2755
Bse3DI GCAATG 2 cut(s) 1650, 1811
Bse8I GATNNNNATC 6 cut(s) 141, 421, 489, 594, 1209, 2642
BseBI CCWGG 3 cut(s) 111, 884, 1535
BseDI CCNNGG 4 cut(s) 363, 810, 1605, 3298
BseGI GGATG 7 cut(s) 1085, 1350, 1767, 1910, 2398, 2986, 3061
BseJI GATNNNNATC 6 cut(s) 141, 421, 489, 594, 1209, 2642
BseLI CCNNNNNNNGG 5 cut(s) 1007, 1169, 2371, 2857, 3220
BseMI GCAATG 2 cut(s) 1650, 1811
BseMII CTCAG 9 cut(s) 758, 795, 1104, 1146, 1812, 1892, 1968, 2570, 3275
BseNI ACTGG 5 cut(s) 583, 1001, 2034, 2154, 2755
BseRI GAGGAG 2 cut(s) 1838, 3084
BseSI GKGCMC 1 cut(s) 325
BseXI GCAGC 5 cut(s) 529, 1447, 1588, 2735, 3190
BseYI CCCAGC 2 cut(s) 1579, 2166
Bsh1236I CGCG 1 cut(s) 2972
BshFI GGCC 5 cut(s) 323, 789, 809, 1471, 1568
BshNI GGYRCC 2 cut(s) 886, 1884
BsiHKAI GWGCWC 3 cut(s) 752, 1803, 2234
BsiHKCI CYCGRG 1 cut(s) 377
BsiSI CCGG 2 cut(s) 43, 1163
BslFI GGGAC 2 cut(s) 230, 2213
BslI CCNNNNNNNGG 5 cut(s) 1007, 1169, 2371, 2857, 3220
BsmBI CGTCTC 1 cut(s) 2979
BsmFI GGGAC 2 cut(s) 230, 2213
BsmI GAATGC 2 cut(s) 195, 1690
BsnI GGCC 5 cut(s) 323, 789, 809, 1471, 1568
Bso31I GGTCTC 3 cut(s) 656, 1153, 1340
BsoBI CYCGRG 1 cut(s) 377
Bsp120I GGGCCC 1 cut(s) 321
Bsp1286I GDGCHC 5 cut(s) 325, 752, 990, 1803, 2234
Bsp19I CCATGG 2 cut(s) 363, 810
BspANI GGCC 5 cut(s) 323, 789, 809, 1471, 1568
BspCNI CTCAG 9 cut(s) 757, 796, 1103, 1147, 1813, 1891, 1969, 2571, 3274
BspFNI CGCG 1 cut(s) 2972
BspHI TCATGA 1 cut(s) 223
BspMI ACCTGC 1 cut(s) 681
BspOI GCTAGC 2 cut(s) 2384, 2388
BspPI GGATC 7 cut(s) 524, 1441, 2144, 2298, 2739, 2910, 3288
BspT107I GGYRCC 2 cut(s) 886, 1884
BspTNI GGTCTC 3 cut(s) 656, 1153, 1340
BsrBI CCGCTC 1 cut(s) 3206
BsrDI GCAATG 2 cut(s) 1650, 1811
BsrFI RCCGGY 1 cut(s) 1162
BsrI ACTGG 5 cut(s) 583, 1001, 2034, 2154, 2755
BssAI RCCGGY 1 cut(s) 1162
BssECI CCNNGG 4 cut(s) 363, 810, 1605, 3298
BssSI CACGAG 3 cut(s) 1167, 2628, 2976
BssT1I CCWWGG 2 cut(s) 363, 810
Bst2BI CACGAG 3 cut(s) 1167, 2628, 2976
Bst2UI CCWGG 3 cut(s) 111, 884, 1535
Bst4CI ACNGT 7 cut(s) 173, 457, 1389, 1633, 1639, 2269, 3279
Bst6I CTCTTC 5 cut(s) 1040, 1086, 1515, 1705, 2256
BstAPI GCANNNNNTGC 2 cut(s) 539, 1817
BstC8I GCNNGC 7 cut(s) 631, 953, 1818, 2178, 2382, 2386, 2921
BstDSI CCRYGG 3 cut(s) 363, 810, 3298
BstF5I GGATG 7 cut(s) 1085, 1350, 1767, 1910, 2398, 2986, 3061
BstFNI CGCG 1 cut(s) 2972
BstHHI GCGC 4 cut(s) 403, 635, 2287, 2972
BstMWI GCNNNNNNNGC 6 cut(s) 539, 562, 961, 1477, 1817, 1907
BstNI CCWGG 3 cut(s) 111, 884, 1535
BstNSI RCATGY 4 cut(s) 976, 1365, 1427, 2602
BstPAI GACNNNNGTC 1 cut(s) 2045
BstSCI CCNGG 4 cut(s) 42, 109, 882, 1533
BstSLI GKGCMC 1 cut(s) 325
BstUI CGCG 1 cut(s) 2972
BstV1I GCAGC 5 cut(s) 529, 1447, 1588, 2735, 3190
BstV2I GAAGAC 3 cut(s) 486, 1043, 2598
BstX2I RGATCY 4 cut(s) 516, 1446, 2303, 3293
BstYI RGATCY 4 cut(s) 516, 1446, 2303, 3293
BsuI GTATCC 2 cut(s) 1621, 2053
BsuRI GGCC 5 cut(s) 323, 789, 809, 1471, 1568
BtgI CCRYGG 3 cut(s) 363, 810, 3298
BtgZI GCGATG 1 cut(s) 1700
BtsCI GGATG 7 cut(s) 1085, 1350, 1767, 1910, 2398, 2986, 3061
BveI ACCTGC 1 cut(s) 681
Cac8I GCNNGC 7 cut(s) 631, 953, 1818, 2178, 2382, 2386, 2921
CaiI CAGNNNCTG 2 cut(s) 1438, 3268
CciI TCATGA 1 cut(s) 223
CfoI GCGC 4 cut(s) 403, 635, 2287, 2972
Cfr10I RCCGGY 1 cut(s) 1162
Cfr13I GGNCC 7 cut(s) 321, 322, 787, 1469, 1566, 2069, 2200
CseI GACGC 2 cut(s) 1991, 2961
Csp6I GTAC 7 cut(s) 261, 659, 918, 2411, 2954, 3224, 3280
CviQI GTAC 7 cut(s) 261, 659, 918, 2411, 2954, 3224, 3280
DraI TTTAAA 1 cut(s) 1122
DriI GACNNNNNGTC 2 cut(s) 1391, 3154
Eam1104I CTCTTC 5 cut(s) 1040, 1086, 1515, 1705, 2256
Eam1105I GACNNNNNGTC 2 cut(s) 1391, 3154
EarI CTCTTC 5 cut(s) 1040, 1086, 1515, 1705, 2256
EciI GGCGGA 2 cut(s) 67, 541
Ecl136II GAGCTC 2 cut(s) 750, 2232
Eco130I CCWWGG 2 cut(s) 363, 810
Eco24I GRGCYC 4 cut(s) 325, 752, 990, 2234
Eco31I GGTCTC 3 cut(s) 656, 1153, 1340
Eco32I GATATC 3 cut(s) 38, 1527, 2716
Eco47I GGWCC 2 cut(s) 2069, 2200
Eco53kI GAGCTC 2 cut(s) 750, 2232
Eco57I CTGAAG 6 cut(s) 14, 225, 627, 1064, 1460, 1686
Eco88I CYCGRG 1 cut(s) 377
EcoICRI GAGCTC 2 cut(s) 750, 2232
EcoO109I RGGNCCY 4 cut(s) 321, 322, 1469, 2200
EcoRI GAATTC 2 cut(s) 272, 3035
EcoRII CCWGG 3 cut(s) 109, 882, 1533
EcoRV GATATC 3 cut(s) 38, 1527, 2716
EcoT14I CCWWGG 2 cut(s) 363, 810
EcoT22I ATGCAT 2 cut(s) 1692, 2347
EcoT38I GRGCYC 4 cut(s) 325, 752, 990, 2234
ErhI CCWWGG 2 cut(s) 363, 810
Esp3I CGTCTC 1 cut(s) 2979
FaqI GGGAC 2 cut(s) 230, 2213
FauI CCCGC 2 cut(s) 777, 844
FauNDI CATATG 1 cut(s) 2095
FbaI TGATCA 2 cut(s) 226, 2272
Fnu4HI GCNGC 6 cut(s) 543, 1436, 1577, 2004, 2724, 3179
FokI GGATG 7 cut(s) 1072, 1337, 1774, 1897, 2405, 2973, 3068
FriOI GRGCYC 4 cut(s) 325, 752, 990, 2234
Fsp4HI GCNGC 6 cut(s) 543, 1436, 1577, 2004, 2724, 3179
FspBI CTAG 9 cut(s) 522, 696, 848, 1401, 2381, 2385, 2852, 3159, 3170
GlaI GCGC 4 cut(s) 402, 634, 2286, 2971
GluI GCNGC 6 cut(s) 543, 1436, 1577, 2004, 2724, 3179
GsaI CCCAGC 2 cut(s) 1583, 2170
GsuI CTGGAG 4 cut(s) 657, 1116, 1556, 2051
HaeIII GGCC 5 cut(s) 323, 789, 809, 1471, 1568
HapII CCGG 2 cut(s) 43, 1163
HgaI GACGC 2 cut(s) 1991, 2961
HhaI GCGC 4 cut(s) 403, 635, 2287, 2972
Hin6I GCGC 4 cut(s) 401, 633, 2285, 2970
HinP1I GCGC 4 cut(s) 401, 633, 2285, 2970
HincII GTYRAC 2 cut(s) 1320, 2576
HindII GTYRAC 2 cut(s) 1320, 2576
HindIII AAGCTT 2 cut(s) 710, 1925
HpaII CCGG 2 cut(s) 43, 1163
HphI GGTGA 8 cut(s) 300, 384, 426, 1184, 1196, 1542, 2202, 2905
Hpy166II GTNNAC 9 cut(s) 1320, 1406, 1484, 1613, 1755, 2069, 2576, 2748, 2954
Hpy8I GTNNAC 9 cut(s) 1320, 1406, 1484, 1613, 1755, 2069, 2576, 2748, 2954
HpyAV CCTTC 8 cut(s) 673, 1540, 1552, 2428, 2458, 2493, 2680, 2828
HpyCH4III ACNGT 7 cut(s) 173, 457, 1389, 1633, 1639, 2269, 3279
HpyCH4IV ACGT 2 cut(s) 1728, 1751
HpyF10VI GCNNNNNNNGC 6 cut(s) 539, 562, 961, 1477, 1817, 1907
HpySE526I ACGT 2 cut(s) 1728, 1751
HspAI GCGC 4 cut(s) 401, 633, 2285, 2970
KflI GGGWCCC 1 cut(s) 2200
Ksp22I TGATCA 2 cut(s) 226, 2272
LmnI GCTCC 8 cut(s) 638, 2173, 2229, 2782, 2890, 2928, 3136, 3203
Lsp1109I GCAGC 5 cut(s) 529, 1447, 1588, 2735, 3190
LweI GCATC 8 cut(s) 402, 529, 771, 1677, 1919, 2939, 3165, 3266
MaeI CTAG 9 cut(s) 522, 696, 848, 1401, 2381, 2385, 2852, 3159, 3170
MaeII ACGT 2 cut(s) 1728, 1751
MaeIII GTNAC 8 cut(s) 118, 367, 390, 1548, 1633, 1764, 2426, 2911
MbiI CCGCTC 1 cut(s) 3206
MfeI CAATTG 2 cut(s) 1896, 2235
MflI RGATCY 4 cut(s) 516, 1446, 2303, 3293
MhlI GDGCHC 5 cut(s) 325, 752, 990, 1803, 2234
MlyI GAGTC 8 cut(s) 115, 398, 1057, 1085, 1547, 1844, 2471, 3005
MmeI TCCRAC 2 cut(s) 988, 1647
Mph1103I ATGCAT 2 cut(s) 1692, 2347
MroXI GAANNNNTTC 4 cut(s) 210, 1299, 1751, 3247
MslI CAYNNNNRTG 5 cut(s) 1218, 1760, 1862, 2490, 3123
MspA1I CMGCKG 4 cut(s) 1094, 1438, 1579, 2221
MspI CCGG 2 cut(s) 43, 1163
MspR9I CCNGG 4 cut(s) 44, 111, 884, 1535
MunI CAATTG 2 cut(s) 1896, 2235
Mva1269I GAATGC 2 cut(s) 195, 1690
MvaI CCWGG 3 cut(s) 111, 884, 1535
MvnI CGCG 1 cut(s) 2972
MwoI GCNNNNNNNGC 6 cut(s) 539, 562, 961, 1477, 1817, 1907
NciI CCSGG 1 cut(s) 44
NcoI CCATGG 2 cut(s) 363, 810
NdeI CATATG 1 cut(s) 2095
NheI GCTAGC 2 cut(s) 2380, 2384
NmeAIII GCCGAG 1 cut(s) 1630
NmuCI GTSAC 6 cut(s) 118, 390, 1548, 1633, 1764, 2911
NsiI ATGCAT 2 cut(s) 1692, 2347
NspI RCATGY 4 cut(s) 976, 1365, 1427, 2602
PagI TCATGA 1 cut(s) 223
PciI ACATGT 1 cut(s) 972
PctI GAATGC 2 cut(s) 195, 1690
PdmI GAANNNNTTC 4 cut(s) 210, 1299, 1751, 3247
PflFI GACNNNGTC 1 cut(s) 1985
PflMI CCANNNNNTGG 3 cut(s) 1007, 2371, 3220
PfoI TCCNGGA 1 cut(s) 1533
PkrI GCNGC 6 cut(s) 544, 1437, 1578, 2005, 2725, 3180
PleI GAGTC 8 cut(s) 115, 397, 1056, 1084, 1546, 1844, 2471, 3004
PpsI GAGTC 8 cut(s) 115, 397, 1056, 1084, 1546, 1844, 2471, 3004
PpuMI RGGWCCY 1 cut(s) 2200
PscI ACATGT 1 cut(s) 972
PshAI GACNNNNGTC 1 cut(s) 2045
PshBI ATTAAT 3 cut(s) 344, 2087, 2840
PsiI TTATAA 2 cut(s) 101, 2184
Psp124BI GAGCTC 2 cut(s) 752, 2234
Psp5II RGGWCCY 1 cut(s) 2200
Psp6I CCWGG 3 cut(s) 109, 882, 1533
PspFI CCCAGC 2 cut(s) 1579, 2166
PspGI CCWGG 3 cut(s) 109, 882, 1533
PspOMI GGGCCC 1 cut(s) 321
PspPI GGNCC 7 cut(s) 321, 322, 787, 1469, 1566, 2069, 2200
PspPPI RGGWCCY 1 cut(s) 2200
PsrI GAACNNNNNNTAC 2 cut(s) 3081, 3113
PstNI CAGNNNCTG 2 cut(s) 1438, 3268
PsuI RGATCY 4 cut(s) 516, 1446, 2303, 3293
PsyI GACNNNGTC 1 cut(s) 1985
PvuII CAGCTG 3 cut(s) 1094, 1438, 1579
RsaI GTAC 7 cut(s) 262, 660, 919, 2412, 2955, 3225, 3281
RsaNI GTAC 7 cut(s) 261, 659, 918, 2411, 2954, 3224, 3280
RseI CAYNNNNRTG 5 cut(s) 1218, 1760, 1862, 2490, 3123
SacI GAGCTC 2 cut(s) 752, 2234
SatI GCNGC 6 cut(s) 543, 1436, 1577, 2004, 2724, 3179
Sau96I GGNCC 7 cut(s) 321, 322, 787, 1469, 1566, 2069, 2200
SchI GAGTC 8 cut(s) 115, 398, 1057, 1085, 1547, 1844, 2471, 3005
ScrFI CCNGG 4 cut(s) 44, 111, 884, 1535
SduI GDGCHC 5 cut(s) 325, 752, 990, 1803, 2234
SfaNI GCATC 8 cut(s) 402, 529, 771, 1677, 1919, 2939, 3165, 3266
SinI GGWCC 2 cut(s) 2069, 2200
SmiMI CAYNNNNRTG 5 cut(s) 1218, 1760, 1862, 2490, 3123
SmlI CTYRAG 5 cut(s) 444, 1304, 1473, 2015, 3151
SmoI CTYRAG 5 cut(s) 444, 1304, 1473, 2015, 3151
SpeI ACTAGT 1 cut(s) 1400
SspI AATATT 1 cut(s) 2024
SspMI CTAG 9 cut(s) 522, 696, 848, 1401, 2381, 2385, 2852, 3159, 3170
SstI GAGCTC 2 cut(s) 752, 2234
StyD4I CCNGG 4 cut(s) 42, 109, 882, 1533
StyI CCWWGG 2 cut(s) 363, 810
TaaI ACNGT 7 cut(s) 173, 457, 1389, 1633, 1639, 2269, 3279
TaiI ACGT 2 cut(s) 1731, 1754
TatI WGTACW 2 cut(s) 2953, 3279
TauI GCSGC 1 cut(s) 2006
TseFI GTSAC 6 cut(s) 118, 390, 1548, 1633, 1764, 2911
TseI GCWGC 5 cut(s) 542, 1435, 1576, 2723, 3178
Tsp45I GTSAC 6 cut(s) 118, 390, 1548, 1633, 1764, 2911
TspDTI ATGAA 7 cut(s) 263, 285, 513, 1248, 1533, 1856, 2975
TspGWI ACGGA 4 cut(s) 590, 1573, 2873, 3135
Tth111I GACNNNGTC 1 cut(s) 1985
Van91I CCANNNNNTGG 3 cut(s) 1007, 2371, 3220
VpaK11BI GGWCC 2 cut(s) 2069, 2200
VspI ATTAAT 3 cut(s) 344, 2087, 2840
XapI RAATTY 5 cut(s) 272, 1299, 2157, 2797, 3035
XbaI TCTAGA 2 cut(s) 3158, 3169
XceI RCATGY 4 cut(s) 976, 1365, 1427, 2602
XcmI CCANNNNNNNNNTGG 1 cut(s) 1202
XmnI GAANNNNTTC 4 cut(s) 210, 1299, 1751, 3247
XspI CTAG 9 cut(s) 522, 696, 848, 1401, 2381, 2385, 2852, 3159, 3170
Zsp2I ATGCAT 2 cut(s) 1692, 2347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.