Rh1CG074400

Plant family of unknown function (DUF810)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0005738
Physical Location & Seq
Reverse (-)
15517984 .. 15535781
17798 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG074400.1

Sequence Viewer

Length: 3036 bp
ATGGACGAGGAAAATGCTGTGGAGCTTTTACAGAGGTTTCGCCGCGACAGGCGAATACTGCTTGATTTTATACTGGCTGGTAGCTTAATCAAGAAGGTCATAATGCCTCCCGGGGCGGTTACGCTGGACGATGTCGATCTTGACCAAGTCAGTGTTGATTATGTGCTCAATTGTGCTAGGAAAGGTGGAATGCTTGAACTGTCTGAGGCTATTAGGGACTATCATGACCATACCGGGTTGCCTCAAATGAATAATTCTGGTTCTACTGGTGAGTACTTTTTGGTTACGAATCCTGAGTCTTACGGTTCTCCTCCAAAGAGGGTACCACCACCTGTTCCAGACTACACACCGCCTCCTGTTCTCGCGCCACCTCCTGTAATCACACCATCTATTCCAGACCTTGACTCATCTCCAGTCGAATCGAATGTATCACAATCTGAATCTTTTAACTCCACACAAGTTCGAGAACTTACTGTAGATGATATTGAAGATTTTGAGGATGATGATTTAGATGAGACTGACAGTCTCAGGATTTCAAGAAGGATTCGTAATGATGCTGCTGATCTTGCTCTTGGATTGCCTTCTTTTAAAACAGGTATTATAGAGGATGATCTCCGCGAGACTGCATATGAAATCCTCTTGGCGTGTGCTGGTGCTGCAGGGGGTCTCATTGTGCCATCAAAAGAGAAAAAGAAAGACAAAAGGTCAAAGCTGATGAGGAAACTAGGACGTAGTAGAAGTGAAAATGTTGTGAGTCAGTCTCAACGAGCACCTGGGATGGTTGGTTTGTTGGAAGCCATGCGTGTCCAGATGGAGATATCTGAGGCAATGGACATCAGGACTAGACAAGGGCTGCTGAATGCACTAGCAGGAAAAGTGGGAAAAAGAATGGATGCCCTACTTGTTCCTTTGGAACTTTTATGTTGTATTTCACGGTCAGAATTTTCTGACAAGAAGGCTTATATACGATGGCAGAAAAGGCAGTTGAATATACTAGAGGAGGGGCTTCTTAATCACACTGCTGTTGGATTTGGGGAGTCTGGACGGAAGGCGAGTGAGTTGAGGATTCTTTTAGCAAAGATTGAAGAATCTGAGTCTCTTCCACCTTCCACCGGTGAACTCCAACGAACAGAATGCTTGAGATCTCTTCGAGAGATTACTGCTCCACTTGCTGAGAGGCCTGCTCGGGGTGACTTGACTGGTGAAGTATGCCACTGGGCAGATGGTTATCATTTGAATGTTAGACTATATGAGAAGCTGCTTGTCAGTGTCTTCGATATGTTAGATGAGGGAAAGCTAACTGAGGAAGTGGAAGAAATACTTGAGCTCTTGAAGTCAACATGGCGTGTTTTAGGTATCACGGAGACCATTCATTACACCTGCTATGCATGGGTCTTATTCCGTCAGCATGTTGTTACCAGTGAGCAAGGAATTTTACAACATGCCATTGAACAGTTAAAGAAAATACCATTGAAGGAACAAAGGGGACCGCAAGAGAGGTTACACTTGAAAAGTTTGCATTCCAGAGTTGAAGGCAAACAGGGTTACCAAGATTTATCTTTCTTACAGTCCTTTTTGTCTCCCATTCAGAAATGGGCTGATAAGCAACTTGGAGACTACCACCTGCACTTCGCTGAGGTGTCAGTTATGATGGAGAATATAGTGACAGTTGCGATGATTACTCGGAGGCTTCTTCTGGAGGAACCTGAAGCAGCTACGATGCAATCTACATCTGCCACTGATCGAGATCAAATAGAATCTTATATATCATCTTCTATCAAGAATGCATTTACAAGGATCTTGCAGTCTCTTGAAAAATCAGACACCAAGCACGAACATCATTTGGCATTGCTTGCTGAAGAGACCAAGAAACTTTTGAAAAAGGACACAGCCTTGTTTATGCCAATTTTATCTCAGAGGCATCCACAAGCAACTGCTGTCTCATCCTCGCTGCTTCATAGGCTTTATGGCAACAAGTTGAAACCTTTTCTTGGTGTTGCTGAGCATCTGACCGAGGATGTGGTATCTGTATTTCCTGCTGCTGACGACCTTGAGCAGTACATGATGGAACTTATTTTGTCGTCTTGTGGAGAGGAAACTGCAGAGATATACTCTAGGAAAATAGTTCCTTACCAGATTGAGTCTATATCTGGAACATTAGTGATGCGTTGGGTCAATTCACAACTTGCGAGGATCTTAGGTTGGGTTGAACGGGCTATTCAACAAGAGAGGTGGGACCCAATATCACCTCAACAGCGGCATGGGAGTTCAATAGTTGAAGTATTTAGAATTGTAGAGGAGACTGTTGACCAATTTTTTGAGCTTAAGGTTCCAATGAGGTCTTCAGAATTGAGTAGCCTGTTTCGTGGAGTTGACAATGCATTTCAAGTTTATGCAAATCACGTCATTGACAAATTGGCTACAAAGGAGGACTTGATTCCACCTGTGCCCATTCTCACACGATACAAGAAGGAAGCTGGGATAAAGGCTTTTGTAAAAAAGGAACTATTTGACCCTAGGTTGCCTGATGAGAGAAGGTCTACGGAAATTAATGTTCGAACCACTCCAACTCTCTGTGTTCAGTTGAACACACTTTATTATGCAATCAATGAGTTGAATAAGTTGGAAGATGGCATTTGGGAGCGATGGACGAGGAAGAAGCCCCGCCAAAAGTTTATCAAGAAATCCTTAGATGAGAAATCTAAAAGTTTCATGCAGAAGGACACATTTGATGGGAGTAGGAAAGATATAAACGCTGCAATAGACCGAATATGCGAGTTCACCGGAACTAAAATTATCTTTTGGGATTTGAGGGAACCATTTATCAACAACTTATATAAACCAAGTGTTTCTCTTTCTAGGTTCGAGGCAGTGATCGAACCACTTGATATGGAACTTTGTCAACTATGTGATATAATTGTGGAACCACTCAGGGATCGTATTGTGACAAGTCTCCTTCAAGCAACACTGGTTATGCCTCACCCTTTTTCATTTGAAAAACTCTGTCAAAGATCCTGTGATCTCTATCTAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005911 GO:0008150 GO:0009506 GO:0009987 GO:0010118 GO:0016020 GO:0030054 GO:0044424 GO:0044464 GO:0055044 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF810

Protein Analysis

1011

Amino Acids

114.99

Weight (kDa)

5.65

Isoelectric Point (pI)

54.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_PATROL1 PF25761 719 - 989 1.8e-78 PATROL1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1388, 1632
Acc36I ACCTGC 2 cut(s) 1388, 1632
Acc65I GGTACC 1 cut(s) 322
AccB1I GGYRCC 1 cut(s) 322
AccI GTMKAC 1 cut(s) 2540
AccII CGCG 3 cut(s) 45, 365, 618
AciI CCGC 7 cut(s) 43, 116, 350, 616, 1490, 2257, 2665
AclWI GGATC 4 cut(s) 1805, 2201, 2943, 3006
AcsI RAATTY 2 cut(s) 941, 1431
AcuI CTGAAG 3 cut(s) 1728, 1878, 2328
AfaI GTAC 3 cut(s) 275, 324, 2060
AfiI CCNNNNNNNGG 3 cut(s) 1112, 1187, 1991
AflII CTTAAG 1 cut(s) 2324
AgeI ACCGGT 1 cut(s) 1112
AhdI GACNNNNNGTC 2 cut(s) 522, 703
AjiI CACGTC 1 cut(s) 2404
AjnI CCWGG 1 cut(s) 772
AjuI GAANNNNNNNTTGG 2 cut(s) 2326, 2358
AluBI AGCT 9 cut(s) 25, 84, 712, 1258, 1297, 1327, 1715, 2323, 2477
AluI AGCT 9 cut(s) 25, 84, 712, 1258, 1297, 1327, 1715, 2323, 2477
Alw21I GWGCWC 3 cut(s) 168, 772, 1329
AlwI GGATC 4 cut(s) 1805, 2201, 2943, 3006
Ama87I CYCGRG 2 cut(s) 110, 1185
AoxI GGCC 1 cut(s) 1178
ApeKI GCWGC 8 cut(s) 557, 656, 853, 1258, 1712, 1951, 2039, 2756
ApoI RAATTY 2 cut(s) 941, 1431
ArsI GACNNNNNNTTYG 4 cut(s) 281, 313, 2300, 2332
AseI ATTAAT 1 cut(s) 2550
AsiGI ACCGGT 1 cut(s) 1112
Asp718I GGTACC 1 cut(s) 322
AspA2I CCTAGG 1 cut(s) 2516
AspLEI GCGC 1 cut(s) 367
AspS9I GGNCC 2 cut(s) 1487, 2236
AsuC2I CCSGG 3 cut(s) 111, 112, 235
AsuHPI GGTGA 7 cut(s) 281, 1127, 1202, 1214, 2238, 2773, 2972
AsuII TTCGAA 1 cut(s) 2557
AvaI CYCGRG 2 cut(s) 110, 1185
AvaII GGWCC 2 cut(s) 1487, 2236
AvrII CCTAGG 1 cut(s) 2516
BaeGI GKGCMC 1 cut(s) 2451
BanI GGYRCC 1 cut(s) 322
BanII GRGCYC 1 cut(s) 1329
BbsI GAAGAC 2 cut(s) 1264, 2334
Bbv12I GWGCWC 3 cut(s) 168, 772, 1329
BbvCI CCTCAGC 1 cut(s) 1635
BbvI GCAGC 8 cut(s) 544, 643, 840, 1245, 1724, 1938, 2026, 2743
BcgI CGANNNNNNTGC 3 cut(s) 30, 1116, 1150
BciT130I CCWGG 1 cut(s) 774
BcnI CCSGG 3 cut(s) 111, 112, 235
BfaI CTAG 8 cut(s) 177, 725, 843, 866, 995, 2115, 2517, 2859
BfmI CTRYAG 3 cut(s) 474, 657, 2100
BfrI CTTAAG 1 cut(s) 2324
BfuAI ACCTGC 2 cut(s) 1388, 1632
BglII AGATCT 1 cut(s) 1142
BlnI CCTAGG 1 cut(s) 2516
BlpI GCTNAGC 1 cut(s) 2001
BmcAI AGTACT 1 cut(s) 275
Bme1390I CCNGG 4 cut(s) 111, 112, 235, 774
Bme18I GGWCC 2 cut(s) 1487, 2236
BmeRI GACNNNNNGTC 2 cut(s) 522, 703
BmeT110I CYCGRG 2 cut(s) 110, 1185
BmgBI CACGTC 1 cut(s) 2404
BmgT120I GGNCC 2 cut(s) 1487, 2236
BmiI GGNNCC 8 cut(s) 324, 1488, 1704, 2237, 2238, 2331, 2817, 2925
BmrFI CCNGG 4 cut(s) 111, 112, 235, 774
BmrI ACTGGG 1 cut(s) 1225
BmsI GCATC 6 cut(s) 544, 883, 1710, 1930, 2014, 2154
BmuI ACTGGG 1 cut(s) 1225
BpiI GAAGAC 2 cut(s) 1264, 2334
BplI GAGNNNNNCTC 6 cut(s) 745, 777, 1168, 1200, 2096, 2128
BpmI CTGGAG 2 cut(s) 396, 1718
Bpu10I CCTNAGC 1 cut(s) 1635
Bpu1102I GCTNAGC 1 cut(s) 2001
Bpu14I TTCGAA 1 cut(s) 2557
BpuEI CTTGAG 3 cut(s) 1159, 1343, 2072
BpuMI CCSGG 3 cut(s) 111, 112, 235
BsaBI GATNNNNATC 4 cut(s) 135, 1227, 1746, 3024
BsaI GGTCTC 3 cut(s) 671, 1358, 1856
BsaJI CCNNGG 5 cut(s) 110, 111, 773, 2013, 2516
BsaWI WCCGGW 2 cut(s) 1112, 2783
BsaXI ACNNNNNCTCC 2 cut(s) 337, 367
Bsc4I CCNNNNNNNGG 3 cut(s) 1112, 1187, 1991
Bse118I RCCGGY 1 cut(s) 1112
Bse1I ACTGG 7 cut(s) 78, 271, 413, 1204, 1220, 1419, 2973
Bse3DI GCAATG 2 cut(s) 834, 1847
Bse8I GATNNNNATC 4 cut(s) 135, 1227, 1746, 3024
BseBI CCWGG 1 cut(s) 774
BseDI CCNNGG 5 cut(s) 110, 111, 773, 2013, 2516
BseGI GGATG 7 cut(s) 505, 613, 783, 898, 1921, 1943, 2023
BseJI GATNNNNATC 4 cut(s) 135, 1227, 1746, 3024
BseLI CCNNNNNNNGG 3 cut(s) 1112, 1187, 1991
BseMI GCAATG 2 cut(s) 834, 1847
BseNI ACTGG 7 cut(s) 78, 271, 413, 1204, 1220, 1419, 2973
BseRI GAGGAG 3 cut(s) 300, 1013, 2312
BseSI GKGCMC 1 cut(s) 2451
BseXI GCAGC 8 cut(s) 544, 643, 840, 1245, 1724, 1938, 2026, 2743
BseYI CCCAGC 1 cut(s) 2477
BsgI GTGCAG 1 cut(s) 1610
Bsh1236I CGCG 3 cut(s) 45, 365, 618
BshFI GGCC 1 cut(s) 1180
BshNI GGYRCC 1 cut(s) 322
BshTI ACCGGT 1 cut(s) 1112
BsiHKAI GWGCWC 3 cut(s) 168, 772, 1329
BsiHKCI CYCGRG 2 cut(s) 110, 1185
BsiSI CCGG 4 cut(s) 111, 234, 1113, 2784
BslFI GGGAC 3 cut(s) 230, 1500, 2249
BslI CCNNNNNNNGG 3 cut(s) 1112, 1187, 1991
BsmFI GGGAC 3 cut(s) 230, 1500, 2249
BsmI GAATGC 5 cut(s) 195, 865, 1139, 1519, 1789
BsnI GGCC 1 cut(s) 1180
Bso31I GGTCTC 3 cut(s) 671, 1358, 1856
BsoBI CYCGRG 2 cut(s) 110, 1185
Bsp119I TTCGAA 1 cut(s) 2557
Bsp1286I GDGCHC 4 cut(s) 168, 772, 1329, 2451
Bsp1720I GCTNAGC 1 cut(s) 2001
BspACI CCGC 7 cut(s) 43, 116, 350, 616, 1490, 2257, 2665
BspANI GGCC 1 cut(s) 1180
BspFNI CGCG 3 cut(s) 45, 365, 618
BspHI TCATGA 1 cut(s) 223
BspLI GGNNCC 8 cut(s) 324, 1488, 1704, 2237, 2238, 2331, 2817, 2925
BspMAI CTGCAG 2 cut(s) 661, 2104
BspMI ACCTGC 2 cut(s) 1388, 1632
BspPI GGATC 4 cut(s) 1805, 2201, 2943, 3006
BspT104I TTCGAA 1 cut(s) 2557
BspT107I GGYRCC 1 cut(s) 322
BspTI CTTAAG 1 cut(s) 2324
BspTNI GGTCTC 3 cut(s) 671, 1358, 1856
BsrDI GCAATG 2 cut(s) 834, 1847
BsrFI RCCGGY 1 cut(s) 1112
BsrI ACTGG 7 cut(s) 78, 271, 413, 1204, 1220, 1419, 2973
BssAI RCCGGY 1 cut(s) 1112
BssECI CCNNGG 5 cut(s) 110, 111, 773, 2013, 2516
BssT1I CCWWGG 1 cut(s) 2516
Bst2UI CCWGG 1 cut(s) 774
Bst4CI ACNGT 9 cut(s) 201, 305, 475, 524, 936, 1455, 1569, 1669, 2305
Bst6I CTCTTC 3 cut(s) 1104, 1152, 1854
BstAFI CTTAAG 1 cut(s) 2324
BstAPI GCANNNNNTGC 1 cut(s) 1853
BstBI TTCGAA 1 cut(s) 2557
BstC8I GCNNGC 2 cut(s) 1182, 1854
BstEII GGTNACC 1 cut(s) 1544
BstF5I GGATG 7 cut(s) 505, 613, 783, 898, 1921, 1943, 2023
BstFNI CGCG 3 cut(s) 45, 365, 618
BstHHI GCGC 1 cut(s) 367
BstMWI GCNNNNNNNGC 7 cut(s) 58, 566, 656, 979, 1169, 1853, 1960
BstNI CCWGG 1 cut(s) 774
BstNSI RCATGY 2 cut(s) 1412, 1445
BstPI GGTNACC 1 cut(s) 1544
BstSCI CCNGG 4 cut(s) 109, 110, 233, 772
BstSFI CTRYAG 3 cut(s) 474, 657, 2100
BstSLI GKGCMC 1 cut(s) 2451
BstUI CGCG 3 cut(s) 45, 365, 618
BstV1I GCAGC 8 cut(s) 544, 643, 840, 1245, 1724, 1938, 2026, 2743
BstV2I GAAGAC 2 cut(s) 1264, 2334
BstX2I RGATCY 4 cut(s) 1142, 1797, 2193, 3011
BstYI RGATCY 4 cut(s) 1142, 1797, 2193, 3011
BsuRI GGCC 1 cut(s) 1180
BtgZI GCGATG 2 cut(s) 1688, 2659
BtrI CACGTC 1 cut(s) 2404
BtsCI GGATG 7 cut(s) 505, 613, 783, 898, 1921, 1943, 2023
BtsI GCAGTG 2 cut(s) 1017, 2877
BtsIMutI CAGTG 8 cut(s) 157, 1017, 1213, 1273, 1426, 1737, 2877, 2966
BveI ACCTGC 2 cut(s) 1388, 1632
Cac8I GCNNGC 2 cut(s) 1182, 1854
CciI TCATGA 1 cut(s) 223
CfoI GCGC 1 cut(s) 367
Cfr10I RCCGGY 1 cut(s) 1112
Cfr13I GGNCC 2 cut(s) 1487, 2236
Cfr9I CCCGGG 1 cut(s) 110
Csp6I GTAC 3 cut(s) 274, 323, 2059
CspAI ACCGGT 1 cut(s) 1112
CspCI CAANNNNNGTGG 2 cut(s) 2213, 2248
CviAII CATG 9 cut(s) 224, 799, 1341, 1389, 1409, 1442, 2062, 2261, 2713
CviQI GTAC 3 cut(s) 274, 323, 2059
DraI TTTAAA 1 cut(s) 589
DriI GACNNNNNGTC 2 cut(s) 522, 703
Eam1104I CTCTTC 3 cut(s) 1104, 1152, 1854
Eam1105I GACNNNNNGTC 2 cut(s) 522, 703
EarI CTCTTC 3 cut(s) 1104, 1152, 1854
Ecl136II GAGCTC 1 cut(s) 1327
Eco130I CCWWGG 1 cut(s) 2516
Eco147I AGGCCT 1 cut(s) 1180
Eco24I GRGCYC 1 cut(s) 1329
Eco31I GGTCTC 3 cut(s) 671, 1358, 1856
Eco32I GATATC 1 cut(s) 819
Eco47I GGWCC 2 cut(s) 1487, 2236
Eco53kI GAGCTC 1 cut(s) 1327
Eco57I CTGAAG 3 cut(s) 1728, 1878, 2328
Eco88I CYCGRG 2 cut(s) 110, 1185
Eco91I GGTNACC 1 cut(s) 1544
EcoICRI GAGCTC 1 cut(s) 1327
EcoO109I RGGNCCY 1 cut(s) 2236
EcoO65I GGTNACC 1 cut(s) 1544
EcoRII CCWGG 1 cut(s) 772
EcoRV GATATC 1 cut(s) 819
EcoT14I CCWWGG 1 cut(s) 2516
EcoT22I ATGCAT 3 cut(s) 1390, 1789, 2383
EcoT38I GRGCYC 1 cut(s) 1329
ErhI CCWWGG 1 cut(s) 2516
FaeI CATG 9 cut(s) 227, 802, 1344, 1392, 1412, 1445, 2065, 2264, 2716
FalI AAGNNNNNCTT 6 cut(s) 1305, 1337, 2417, 2449, 2672, 2704
FaqI GGGAC 3 cut(s) 230, 1500, 2249
FatI CATG 9 cut(s) 223, 798, 1340, 1388, 1408, 1441, 2061, 2260, 2712
FauI CCCGC 1 cut(s) 2672
FauNDI CATATG 1 cut(s) 628
FblI GTMKAC 1 cut(s) 2540
FokI GGATG 7 cut(s) 512, 620, 790, 905, 1908, 1930, 2030
FriOI GRGCYC 1 cut(s) 1329
FspBI CTAG 8 cut(s) 177, 725, 843, 866, 995, 2115, 2517, 2859
GlaI GCGC 1 cut(s) 366
GsaI CCCAGC 1 cut(s) 2481
GsuI CTGGAG 2 cut(s) 396, 1718
HaeIII GGCC 1 cut(s) 1180
HapII CCGG 4 cut(s) 111, 234, 1113, 2784
HhaI GCGC 1 cut(s) 367
Hin1II CATG 9 cut(s) 227, 802, 1344, 1392, 1412, 1445, 2065, 2264, 2716
Hin6I GCGC 1 cut(s) 365
HinP1I GCGC 1 cut(s) 365
HincII GTYRAC 4 cut(s) 1338, 2308, 2374, 2903
HindII GTYRAC 4 cut(s) 1338, 2308, 2374, 2903
HpaII CCGG 4 cut(s) 111, 234, 1113, 2784
HphI GGTGA 7 cut(s) 281, 1127, 1202, 1214, 2238, 2773, 2972
Hpy166II GTNNAC 7 cut(s) 1118, 1338, 2308, 2374, 2541, 2781, 2903
Hpy8I GTNNAC 7 cut(s) 1118, 1338, 2308, 2374, 2541, 2781, 2903
HpyCH4III ACNGT 9 cut(s) 201, 305, 475, 524, 936, 1455, 1569, 1669, 2305
HpyCH4IV ACGT 2 cut(s) 730, 2403
HpyF10VI GCNNNNNNNGC 7 cut(s) 58, 566, 656, 979, 1169, 1853, 1960
HpySE526I ACGT 2 cut(s) 730, 2403
Hsp92II CATG 9 cut(s) 227, 802, 1344, 1392, 1412, 1445, 2065, 2264, 2716
HspAI GCGC 1 cut(s) 365
KflI GGGWCCC 1 cut(s) 2236
KpnI GGTACC 1 cut(s) 326
LmnI GCTCC 3 cut(s) 22, 1168, 2641
Lsp1109I GCAGC 8 cut(s) 544, 643, 840, 1245, 1724, 1938, 2026, 2743
LweI GCATC 6 cut(s) 544, 883, 1710, 1930, 2014, 2154
MaeI CTAG 8 cut(s) 177, 725, 843, 866, 995, 2115, 2517, 2859
MaeII ACGT 2 cut(s) 730, 2403
MaeIII GTNAC 8 cut(s) 118, 283, 1190, 1414, 1500, 1544, 1663, 2944
MfeI CAATTG 1 cut(s) 169
MflI RGATCY 4 cut(s) 1142, 1797, 2193, 3011
MhlI GDGCHC 4 cut(s) 168, 772, 1329, 2451
MlyI GAGTC 6 cut(s) 305, 398, 763, 1046, 1103, 2150
MmeI TCCRAC 5 cut(s) 771, 1006, 1147, 2591, 2604
Mph1103I ATGCAT 3 cut(s) 1390, 1789, 2383
MseI TTAA 7 cut(s) 86, 447, 588, 1011, 1457, 2325, 2550
MslI CAYNNNNRTG 1 cut(s) 1236
MspA1I CMGCKG 1 cut(s) 2257
MspCI CTTAAG 1 cut(s) 2324
MspI CCGG 4 cut(s) 111, 234, 1113, 2784
MspR9I CCNGG 4 cut(s) 111, 112, 235, 774
MunI CAATTG 1 cut(s) 169
Mva1269I GAATGC 5 cut(s) 195, 865, 1139, 1519, 1789
MvaI CCWGG 1 cut(s) 774
MvnI CGCG 3 cut(s) 45, 365, 618
MwoI GCNNNNNNNGC 7 cut(s) 58, 566, 656, 979, 1169, 1853, 1960
NciI CCSGG 3 cut(s) 111, 112, 235
NdeI CATATG 1 cut(s) 628
NlaIII CATG 9 cut(s) 227, 802, 1344, 1392, 1412, 1445, 2065, 2264, 2716
NlaIV GGNNCC 8 cut(s) 324, 1488, 1704, 2237, 2238, 2331, 2817, 2925
NmuCI GTSAC 3 cut(s) 1190, 1663, 2944
NsiI ATGCAT 3 cut(s) 1390, 1789, 2383
NspI RCATGY 2 cut(s) 1412, 1445
NspV TTCGAA 1 cut(s) 2557
PagI TCATGA 1 cut(s) 223
PaqCI CACCTGC 2 cut(s) 1388, 1632
PceI AGGCCT 1 cut(s) 1180
PctI GAATGC 5 cut(s) 195, 865, 1139, 1519, 1789
PfeI GAWTC 8 cut(s) 289, 419, 440, 544, 1066, 1088, 1757, 2437
PflFI GACNNNGTC 2 cut(s) 131, 146
PinAI ACCGGT 1 cut(s) 1112
PleI GAGTC 6 cut(s) 304, 398, 762, 1045, 1102, 2149
PpsI GAGTC 6 cut(s) 304, 398, 762, 1045, 1102, 2149
PpuMI RGGWCCY 1 cut(s) 2236
PshBI ATTAAT 1 cut(s) 2550
Psp124BI GAGCTC 1 cut(s) 1329
Psp5II RGGWCCY 1 cut(s) 2236
Psp6I CCWGG 1 cut(s) 772
PspEI GGTNACC 1 cut(s) 1544
PspFI CCCAGC 1 cut(s) 2477
PspGI CCWGG 1 cut(s) 772
PspN4I GGNNCC 8 cut(s) 324, 1488, 1704, 2237, 2238, 2331, 2817, 2925
PspPI GGNCC 2 cut(s) 1487, 2236
PspPPI RGGWCCY 1 cut(s) 2236
PstI CTGCAG 2 cut(s) 661, 2104
PsuI RGATCY 4 cut(s) 1142, 1797, 2193, 3011
PsyI GACNNNGTC 2 cut(s) 131, 146
RsaI GTAC 3 cut(s) 275, 324, 2060
RsaNI GTAC 3 cut(s) 274, 323, 2059
RseI CAYNNNNRTG 1 cut(s) 1236
SacI GAGCTC 1 cut(s) 1329
SaqAI TTAA 7 cut(s) 86, 447, 588, 1011, 1457, 2325, 2550
Sau96I GGNCC 2 cut(s) 1487, 2236
ScaI AGTACT 1 cut(s) 275
SchI GAGTC 6 cut(s) 305, 398, 763, 1046, 1103, 2150
ScrFI CCNGG 4 cut(s) 111, 112, 235, 774
SduI GDGCHC 4 cut(s) 168, 772, 1329, 2451
SfaNI GCATC 6 cut(s) 544, 883, 1710, 1930, 2014, 2154
SfcI CTRYAG 3 cut(s) 474, 657, 2100
SfuI TTCGAA 1 cut(s) 2557
SgrAI CRCCGGYG 1 cut(s) 1112
SinI GGWCC 2 cut(s) 1487, 2236
SmaI CCCGGG 1 cut(s) 112
SmiMI CAYNNNNRTG 1 cut(s) 1236
SmlI CTYRAG 4 cut(s) 1138, 1322, 2051, 2324
SmoI CTYRAG 4 cut(s) 1138, 1322, 2051, 2324
SseBI AGGCCT 1 cut(s) 1180
SsiI CCGC 7 cut(s) 43, 116, 350, 616, 1490, 2257, 2665
SspMI CTAG 8 cut(s) 177, 725, 843, 866, 995, 2115, 2517, 2859
SstI GAGCTC 1 cut(s) 1329
StuI AGGCCT 1 cut(s) 1180
StyD4I CCNGG 4 cut(s) 109, 110, 233, 772
StyI CCWWGG 1 cut(s) 2516
TaaI ACNGT 9 cut(s) 201, 305, 475, 524, 936, 1455, 1569, 1669, 2305
TaiI ACGT 2 cut(s) 733, 2406
TaqII GACCGA 2 cut(s) 2027, 2781
TatI WGTACW 2 cut(s) 273, 2058
TauI GCSGC 2 cut(s) 45, 2260
TfiI GAWTC 8 cut(s) 289, 419, 440, 544, 1066, 1088, 1757, 2437
Tru1I TTAA 7 cut(s) 86, 447, 588, 1011, 1457, 2325, 2550
Tru9I TTAA 7 cut(s) 86, 447, 588, 1011, 1457, 2325, 2550
TscAI CASTG 8 cut(s) 157, 1024, 1220, 1273, 1426, 1744, 2877, 2973
TseFI GTSAC 3 cut(s) 1190, 1663, 2944
TseI GCWGC 8 cut(s) 557, 656, 853, 1258, 1712, 1951, 2039, 2756
Tsp45I GTSAC 3 cut(s) 1190, 1663, 2944
TspDTI ATGAA 6 cut(s) 263, 645, 1361, 1946, 2701, 2979
TspGWI ACGGA 4 cut(s) 1060, 1376, 1391, 2558
TspMI CCCGGG 1 cut(s) 110
TspRI CASTG 8 cut(s) 157, 1024, 1220, 1273, 1426, 1744, 2877, 2973
Tth111I GACNNNGTC 2 cut(s) 131, 146
Vha464I CTTAAG 1 cut(s) 2324
VpaK11BI GGWCC 2 cut(s) 1487, 2236
VspI ATTAAT 1 cut(s) 2550
XapI RAATTY 2 cut(s) 941, 1431
XceI RCATGY 2 cut(s) 1412, 1445
XcmI CCANNNNNNNNNTGG 1 cut(s) 1220
XmaI CCCGGG 1 cut(s) 110
XmaJI CCTAGG 1 cut(s) 2516
XmiI GTMKAC 1 cut(s) 2540
XspI CTAG 8 cut(s) 177, 725, 843, 866, 995, 2115, 2517, 2859
ZrmI AGTACT 1 cut(s) 275
Zsp2I ATGCAT 3 cut(s) 1390, 1789, 2383
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.