FvH4_7g03630

Plant family of unknown function (DUF810)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0005738
Physical Location & Seq
Reverse (-)
3983285 .. 4001826
18542 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g03630.t2

Sequence Viewer

Length: 3288 bp
ATGGAAGAGGAGAATGCTGTGGAGCTTTTGCAGAGGTTTCGTCGCGACAGGCGAATACTTCTAGATTTCGTACTGGCTGGCAGCTTGATCAAGAAGGTCATAATGCCTCCCGGGGCGGTTACGCTTGACGATGTCGATCTGGACCAAGTCAGTGTTGATTATGTCCTCAATTGTGCCAAGAAAGGTGGAATGCTTGAACTCTCTGAAGCTATTAGAGACTATCATGACCATACCGGGTTGCCCCAAATGAATAATTCAGGTTCTGCTGGTGAGTTCTTTTTGGTTACGAATCCCGAGTCTTACGGTTCTCCTCCGAAGAGGGCACCGCCACCTCTTCCAGACTACACACCGCCTGCTATTCTTGCGCCACCTCCTGTAATCACACCATCTATTCCAGACTTGGACACATCTCCAGTCGCATCAAGTATATCACAATCTGAATCTTTTAACTCCACACAAGTTCGAGAACTTACTGTAGACGATATTGAAGACTTTGAGGATGATGATTTAGATGAGGCTGACAGTCTCAGGATTTCAAGAAGAACTCGTAATGATGCCACTGATCTTGCTCTTGGACTGCCTTCTTTGAAAACAGGTATTACAGAAGATGATCTCCGCGAGACTGCATATGAAATCCTCTTGGCGTGTGCTGGTGCTGCAGGGGGTCTCATTGTGCCATCAAAAGAGAAAAAGAAAGACAAAAGGTCAAAGCTGATGAGGAAACTAGGACGTAGTAGAAGTGAAAATGTTGTGAGTCAGTCTCAACGAGCACCTGGGATGGTTGGTTTGTTGGAGGCCATGCGTGTCCAGATGGAGATATCTGAGGCAATGGACATCAGAACTAGACAAGGGCTGCTGAATGCGCTAGCAGGAAAAGTGGGAAAAAGAATGGATGCCCTGTTGGTTCCTCTAGAACTTTTATGTTGTATTTCACGCTCAGAATTTTCTGACAAGAAGGCTTATATACGATGGCAGAAAAGGCAGTTGAATATACTAGAGGAGGGGCTTCTTAATCACACTGCTGTTGGATTTGGGGAGTCTGGACGGAAGGCGAGTGAGCTAAGGATTCTCTTAGCAAAGATCGAAGAATCTGAGTCTCTTCCACCCTCCACTGGCGAACTCCAGCGAACTGAATGCTTGAGATCTCTTCGGGAGATTACGGCTCCACTTGCTGAGAGACCTGCTCGGGGTGACTTAACTGGTGAAGTATGCCACTGGGCAGATGGTTATCACTTGAATGTTCGACTATATGAGAAACTGCTCGTCAGTGTCTTTGATATGCTAGATGACGGAAAGCTAACTGAGGAAGTGGAAGAAATACTTGAGCTCTTGAAGTCAACATGGCGTGTTATAGGAATCACAGAGACCATTCATTACACCTGCTATGCATGGGTCTTGTTCCGTCAGTTGAAGAAAATACCATTGAAGGAACAAAGAGGACCACAAGAGAGGTTACACTTGAAAAGTTTGCATTCTAGAGTTGAAGGCAAACAGGGCTTCCAAGATTTGTCTTTCTTACAGTCCTTTTTGTCTCCCATTCAGAAATGGGCTGATAAGCAACTTGGAGACTACCACCTACATTTTGCTGAGGTGTCAGTTATGATGGAGAATATAGTGACAGTTGCGATGATCACGCGGAGGCTTCTTCTGGAGGAACCTGAAGCAGCAGCAATGCAATCTACATCTGCCACAGATCGAGATCAGATAGAATCTTATATATCATCTTCTATCAAGAATGCGTTTACAAGGATCTTGCAATCTCTTGAAAACTCAGACACCAAGCACGAACATCATTTGGCATTGCTTGCTGAAGAGACCAAGAAACTTTTGAAAAAGGACACAACCCTCTTTATGCCAATTTTATCTCAGAGGCATCCACAAGCAACTGCTGTTTCATCATCACTTCTTCATAGGCTTTACGGAAACAAGTTGAAACCATTTCTTGGTGGTGCTGAGCATCTGACCGAGGATGTAGTATCTGTATTTCCTGCTGCTGACAGCCTTGAGCAGTACATGATGGAACTTATTTTGTCTTCTTGTGGAGAGGAAACTGCAGATATATACTATAAGAAAATAATTCCATACCAGATTGAATCTATATCTGGAACATTAGTGATGCGTTGGGTCAATTCACAACTTGCAAGGATCTTAGGTTGGGTTGAACGGGCTATTCAACAAGAGAAGTGGGACCCAATATCACCTCAACAGCGACATGGGAGTTCAATAGTTGAAGTGTTTAGAATTGTGGAGGAGACTGTTGACCAATTTTTTGAGCTGAAGGTTCCCATGAGGTCTTCAGAATTGAGTAGTCTGTTTCGGGGAGTTGACAATGCATACCAAGTTTATGCGAATCACGTCATTGACAAATTGGCTACCAAAGAGGATTTAATTCCACCCGTGCCCATTCTCACACGATACAGGAAGGAAGTTGGGATAAAGGCTTTTGTAAAAAAGGAACTATTTGACCCTAGGTTGCCTGATGAGAGAAGGTCTACTGAAATTAATATTCGAACCACTCCAGCCCTCTGTGTTCAGTTGAACACACTTTATTATGCAATCAATGAGCTGAATAAGTTGGAAGATAGCATATGTGAGCGATGGACGAGGAAGAAGCCCCGCCGAAGCTTTACCAACAAATCCATAGATGTGAAATCTAAAAGTTTCACGCAGAAAGACACATTTGATGGGAGTAGGCAGGATATAAATGCTGCTATAGATCGAATATGCGAGTTCACTGGAACTAAAATTATCTTCTGGGATTTGAGGGAACCATTTATCAACAACTTATATAAACCGAGTGTTTCTCTTTCTAGGTTCGAGGCAGTGATCGAACCACTTGATACGGAACTTGGTCAATTATGTGATATAATTGTGGAACCACTCAGGGATCGTATTGTGACAAGTCTCCTTCAAGCAACACTGGATGGCTTACTCCGTGTCCTATTAGATGGAGGCCCATCCCGTGTTTTCTCTTTGGGTGATGCAAAGCTATTAGAAGAAGATTTAGAGATCCTCAAGGAGTTTTTCATTTCTGGCGGAGATGGGCTTCCACGAGGTGTGGTCGAAAATCAGGTATCACGCGTTCGGCTTGTGGTAAAGTTGCACAGTTACGAGACTCGAGAATTAATTGAGGACTTAAGATCTTCAAGTGGCCTGGAAATGCAGGGTGGTAGAAGCAAACTAGGAGCTGATTCTAAGACTCTATTACGAATATTATGTCACAGGGGTGATTCAGAGGCCTCCCAATTTGTAAAGAAACAATACAAGATTCCAAAGTCCTCTGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005911 GO:0008150 GO:0009506 GO:0009987 GO:0010118 GO:0016020 GO:0030054 GO:0044424 GO:0044464 GO:0055044 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF810

Protein Analysis

1096

Amino Acids

123.58

Weight (kDa)

5.76

Isoelectric Point (pI)

53.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_PATROL1 PF25761 656 - 1046 3.9e-127 PATROL1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1388
Acc36I ACCTGC 2 cut(s) 1189, 1388
AccB1I GGYRCC 1 cut(s) 322
AccB7I CCANNNNNTGG 1 cut(s) 1943
AccI GTMKAC 2 cut(s) 477, 2492
AccII CGCG 4 cut(s) 45, 618, 1636, 3081
AciI CCGC 7 cut(s) 116, 326, 350, 616, 1636, 2617, 3036
AclWI GGATC 4 cut(s) 1757, 2153, 2895, 3004
AcsI RAATTY 1 cut(s) 941
AcuI CTGAAG 5 cut(s) 225, 1680, 1830, 2280, 2297
AdeI CACNNNGTG 1 cut(s) 3056
AfaI GTAC 2 cut(s) 72, 2012
AfiI CCNNNNNNNGG 3 cut(s) 1112, 1187, 1943
AflII CTTAAG 1 cut(s) 3136
AflIII ACRYGT 1 cut(s) 3079
AhdI GACNNNNNGTC 1 cut(s) 703
AjiI CACGTC 1 cut(s) 2356
AjnI CCWGG 2 cut(s) 772, 3153
AleI CACNNNNGTG 1 cut(s) 3225
Alw21I GWGCWC 2 cut(s) 772, 1329
AlwI GGATC 4 cut(s) 1757, 2153, 2895, 3004
AlwNI CAGNNNCTG 1 cut(s) 263
Ama87I CYCGRG 4 cut(s) 110, 293, 1185, 3117
AoxI GGCC 4 cut(s) 795, 2953, 3151, 3237
ApeKI GCWGC 7 cut(s) 81, 656, 853, 1664, 1667, 1991, 2708
ApoI RAATTY 1 cut(s) 941
ArsI GACNNNNNNTTYG 6 cut(s) 281, 313, 2252, 2284, 3202, 3234
AseI ATTAAT 2 cut(s) 2502, 3125
AspA2I CCTAGG 1 cut(s) 2468
AspLEI GCGC 2 cut(s) 367, 865
AspS9I GGNCC 4 cut(s) 142, 1439, 2188, 2954
AsuC2I CCSGG 3 cut(s) 111, 112, 235
AsuHPI GGTGA 6 cut(s) 281, 1202, 1214, 2190, 2990, 3239
AsuII TTCGAA 1 cut(s) 2509
AsuNHI GCTAGC 1 cut(s) 865
AvaI CYCGRG 4 cut(s) 110, 293, 1185, 3117
AvaII GGWCC 3 cut(s) 142, 1439, 2188
AvrII CCTAGG 1 cut(s) 2468
BaeGI GKGCMC 2 cut(s) 325, 2403
BanI GGYRCC 1 cut(s) 322
BanII GRGCYC 1 cut(s) 1329
BauI CACGAG 1 cut(s) 3051
BbsI GAAGAC 3 cut(s) 495, 2025, 2286
Bbv12I GWGCWC 2 cut(s) 772, 1329
BbvCI CCTCAGC 1 cut(s) 1587
BbvI GCAGC 7 cut(s) 93, 643, 840, 1676, 1679, 1978, 2695
BceAI ACGGC 1 cut(s) 1176
BcgI CGANNNNNNTGC 4 cut(s) 20, 54, 1116, 1150
BciT130I CCWGG 2 cut(s) 774, 3155
BclI TGATCA 2 cut(s) 87, 1629
BcnI CCSGG 3 cut(s) 111, 112, 235
BfmI CTRYAG 4 cut(s) 474, 657, 2052, 2712
BfrI CTTAAG 1 cut(s) 3136
BfuAI ACCTGC 2 cut(s) 1189, 1388
BglII AGATCT 2 cut(s) 1142, 3140
BisI GCNGC 7 cut(s) 82, 657, 854, 1665, 1668, 1992, 2709
BlnI CCTAGG 1 cut(s) 2468
BlpI GCTNAGC 1 cut(s) 1953
BlsI GCNGC 7 cut(s) 83, 658, 855, 1666, 1669, 1993, 2710
Bme1390I CCNGG 5 cut(s) 111, 112, 235, 774, 3155
Bme18I GGWCC 3 cut(s) 142, 1439, 2188
BmeRI GACNNNNNGTC 1 cut(s) 703
BmeT110I CYCGRG 4 cut(s) 110, 293, 1185, 3117
BmgBI CACGTC 1 cut(s) 2356
BmgT120I GGNCC 4 cut(s) 142, 1439, 2188, 2954
BmiI GGNNCC 9 cut(s) 324, 906, 1164, 1656, 2189, 2190, 2283, 2769, 2877
BmrFI CCNGG 5 cut(s) 111, 112, 235, 774, 3155
BmrI ACTGGG 1 cut(s) 1225
BmsI GCATC 7 cut(s) 428, 544, 883, 1882, 1966, 2106, 2971
BmtI GCTAGC 1 cut(s) 869
BmuI ACTGGG 1 cut(s) 1225
BpiI GAAGAC 3 cut(s) 495, 2025, 2286
BplI GAGNNNNNCTC 6 cut(s) 745, 777, 1168, 1200, 2788, 2820
BpmI CTGGAG 4 cut(s) 396, 1106, 1670, 2502
Bpu10I CCTNAGC 2 cut(s) 1061, 1587
Bpu1102I GCTNAGC 1 cut(s) 1953
Bpu14I TTCGAA 1 cut(s) 2509
BpuEI CTTGAG 4 cut(s) 1159, 1343, 2024, 2999
BpuMI CCSGG 3 cut(s) 111, 112, 235
BsaBI GATNNNNATC 3 cut(s) 135, 1227, 1698
BsaI GGTCTC 4 cut(s) 671, 1171, 1358, 1808
BsaJI CCNNGG 5 cut(s) 110, 111, 773, 1965, 2468
Bsc4I CCNNNNNNNGG 3 cut(s) 1112, 1187, 1943
Bse1I ACTGG 7 cut(s) 78, 413, 1117, 1204, 1220, 2740, 2925
Bse3DI GCAATG 3 cut(s) 834, 1677, 1799
Bse8I GATNNNNATC 3 cut(s) 135, 1227, 1698
BseBI CCWGG 2 cut(s) 774, 3155
BseDI CCNNGG 5 cut(s) 110, 111, 773, 1965, 2468
BseGI GGATG 7 cut(s) 505, 783, 898, 1873, 1975, 2929, 2957
BseJI GATNNNNATC 3 cut(s) 135, 1227, 1698
BseLI CCNNNNNNNGG 3 cut(s) 1112, 1187, 1943
BseMI GCAATG 3 cut(s) 834, 1677, 1799
BseNI ACTGG 7 cut(s) 78, 413, 1117, 1204, 1220, 2740, 2925
BseRI GAGGAG 4 cut(s) 23, 300, 1013, 2264
BseSI GKGCMC 2 cut(s) 325, 2403
BseXI GCAGC 7 cut(s) 93, 643, 840, 1676, 1679, 1978, 2695
Bsh1236I CGCG 4 cut(s) 45, 618, 1636, 3081
BshFI GGCC 4 cut(s) 797, 2955, 3153, 3239
BshNI GGYRCC 1 cut(s) 322
BsiHKAI GWGCWC 2 cut(s) 772, 1329
BsiHKCI CYCGRG 4 cut(s) 110, 293, 1185, 3117
BsiSI CCGG 2 cut(s) 111, 234
BslFI GGGAC 1 cut(s) 2201
BslI CCNNNNNNNGG 3 cut(s) 1112, 1187, 1943
BsmFI GGGAC 1 cut(s) 2201
BsmI GAATGC 6 cut(s) 19, 195, 865, 1139, 1471, 1741
BsnI GGCC 4 cut(s) 797, 2955, 3153, 3239
Bso31I GGTCTC 4 cut(s) 671, 1171, 1358, 1808
BsoBI CYCGRG 4 cut(s) 110, 293, 1185, 3117
Bsp119I TTCGAA 1 cut(s) 2509
Bsp1286I GDGCHC 4 cut(s) 325, 772, 1329, 2403
Bsp1720I GCTNAGC 1 cut(s) 1953
Bsp68I TCGCGA 1 cut(s) 45
BspACI CCGC 7 cut(s) 116, 326, 350, 616, 1636, 2617, 3036
BspANI GGCC 4 cut(s) 797, 2955, 3153, 3239
BspFNI CGCG 4 cut(s) 45, 618, 1636, 3081
BspHI TCATGA 1 cut(s) 223
BspLI GGNNCC 9 cut(s) 324, 906, 1164, 1656, 2189, 2190, 2283, 2769, 2877
BspMAI CTGCAG 2 cut(s) 661, 2056
BspMI ACCTGC 2 cut(s) 1189, 1388
BspOI GCTAGC 1 cut(s) 869
BspPI GGATC 4 cut(s) 1757, 2153, 2895, 3004
BspT104I TTCGAA 1 cut(s) 2509
BspT107I GGYRCC 1 cut(s) 322
BspTI CTTAAG 1 cut(s) 3136
BspTNI GGTCTC 4 cut(s) 671, 1171, 1358, 1808
BsrDI GCAATG 3 cut(s) 834, 1677, 1799
BsrI ACTGG 7 cut(s) 78, 413, 1117, 1204, 1220, 2740, 2925
BssECI CCNNGG 5 cut(s) 110, 111, 773, 1965, 2468
BssSI CACGAG 1 cut(s) 3051
BssT1I CCWWGG 1 cut(s) 2468
Bst2BI CACGAG 1 cut(s) 3051
Bst2UI CCWGG 2 cut(s) 774, 3155
Bst4CI ACNGT 7 cut(s) 305, 475, 524, 1521, 1621, 2257, 3107
Bst6I CTCTTC 5 cut(s) 311, 339, 1104, 1152, 1806
BstAFI CTTAAG 1 cut(s) 3136
BstAPI GCANNNNNTGC 1 cut(s) 1805
BstBI TTCGAA 1 cut(s) 2509
BstC8I GCNNGC 4 cut(s) 79, 354, 867, 1806
BstF5I GGATG 7 cut(s) 505, 783, 898, 1873, 1975, 2929, 2957
BstFNI CGCG 4 cut(s) 45, 618, 1636, 3081
BstHHI GCGC 2 cut(s) 367, 865
BstMWI GCNNNNNNNGC 7 cut(s) 362, 656, 862, 979, 1169, 1494, 1805
BstNI CCWGG 2 cut(s) 774, 3155
BstSCI CCNGG 5 cut(s) 109, 110, 233, 772, 3153
BstSFI CTRYAG 4 cut(s) 474, 657, 2052, 2712
BstSLI GKGCMC 2 cut(s) 325, 2403
BstUI CGCG 4 cut(s) 45, 618, 1636, 3081
BstV1I GCAGC 7 cut(s) 93, 643, 840, 1676, 1679, 1978, 2695
BstV2I GAAGAC 3 cut(s) 495, 2025, 2286
BstX2I RGATCY 5 cut(s) 1142, 1749, 2145, 3009, 3140
BstYI RGATCY 5 cut(s) 1142, 1749, 2145, 3009, 3140
BsuRI GGCC 4 cut(s) 797, 2955, 3153, 3239
BtgZI GCGATG 2 cut(s) 1640, 2611
BtrI CACGTC 1 cut(s) 2356
BtsCI GGATG 7 cut(s) 505, 783, 898, 1873, 1975, 2929, 2957
BtsI GCAGTG 2 cut(s) 1017, 2829
BtsIMutI CAGTG 9 cut(s) 157, 558, 1017, 1110, 1213, 1273, 2733, 2829, 2918
BtuMI TCGCGA 1 cut(s) 45
BveI ACCTGC 2 cut(s) 1189, 1388
Cac8I GCNNGC 4 cut(s) 79, 354, 867, 1806
CaiI CAGNNNCTG 1 cut(s) 263
CciI TCATGA 1 cut(s) 223
CfoI GCGC 2 cut(s) 367, 865
Cfr13I GGNCC 4 cut(s) 142, 1439, 2188, 2954
Cfr9I CCCGGG 1 cut(s) 110
Csp6I GTAC 2 cut(s) 71, 2011
CspCI CAANNNNNGTGG 6 cut(s) 166, 201, 547, 582, 2165, 2200
CviAII CATG 7 cut(s) 224, 799, 1341, 1389, 2014, 2213, 2287
CviQI GTAC 2 cut(s) 71, 2011
DraIII CACNNNGTG 1 cut(s) 3056
DriI GACNNNNNGTC 1 cut(s) 703
Eam1104I CTCTTC 5 cut(s) 311, 339, 1104, 1152, 1806
Eam1105I GACNNNNNGTC 1 cut(s) 703
EarI CTCTTC 5 cut(s) 311, 339, 1104, 1152, 1806
EciI GGCGGA 1 cut(s) 3051
Ecl136II GAGCTC 1 cut(s) 1327
Eco130I CCWWGG 1 cut(s) 2468
Eco147I AGGCCT 1 cut(s) 3239
Eco24I GRGCYC 1 cut(s) 1329
Eco31I GGTCTC 4 cut(s) 671, 1171, 1358, 1808
Eco32I GATATC 1 cut(s) 819
Eco47I GGWCC 3 cut(s) 142, 1439, 2188
Eco53kI GAGCTC 1 cut(s) 1327
Eco57I CTGAAG 5 cut(s) 225, 1680, 1830, 2280, 2297
Eco88I CYCGRG 4 cut(s) 110, 293, 1185, 3117
EcoICRI GAGCTC 1 cut(s) 1327
EcoO109I RGGNCCY 1 cut(s) 2188
EcoRII CCWGG 2 cut(s) 772, 3153
EcoRV GATATC 1 cut(s) 819
EcoT14I CCWWGG 1 cut(s) 2468
EcoT22I ATGCAT 2 cut(s) 1390, 2335
EcoT38I GRGCYC 1 cut(s) 1329
ErhI CCWWGG 1 cut(s) 2468
FaeI CATG 7 cut(s) 227, 802, 1344, 1392, 2017, 2216, 2290
FalI AAGNNNNNCTT 2 cut(s) 1305, 1337
FaqI GGGAC 1 cut(s) 2201
FatI CATG 7 cut(s) 223, 798, 1340, 1388, 2013, 2212, 2286
FauI CCCGC 1 cut(s) 2624
FauNDI CATATG 2 cut(s) 628, 2588
FbaI TGATCA 2 cut(s) 87, 1629
FblI GTMKAC 2 cut(s) 477, 2492
Fnu4HI GCNGC 7 cut(s) 82, 657, 854, 1665, 1668, 1992, 2709
FokI GGATG 7 cut(s) 512, 790, 905, 1860, 1982, 2936, 2944
FriOI GRGCYC 1 cut(s) 1329
Fsp4HI GCNGC 7 cut(s) 82, 657, 854, 1665, 1668, 1992, 2709
GlaI GCGC 2 cut(s) 366, 864
GluI GCNGC 7 cut(s) 82, 657, 854, 1665, 1668, 1992, 2709
GsuI CTGGAG 4 cut(s) 396, 1106, 1670, 2502
HaeIII GGCC 4 cut(s) 797, 2955, 3153, 3239
HapII CCGG 2 cut(s) 111, 234
HhaI GCGC 2 cut(s) 367, 865
Hin1II CATG 7 cut(s) 227, 802, 1344, 1392, 2017, 2216, 2290
Hin6I GCGC 2 cut(s) 365, 863
HinP1I GCGC 2 cut(s) 365, 863
HincII GTYRAC 3 cut(s) 1338, 2260, 2326
HindII GTYRAC 3 cut(s) 1338, 2260, 2326
HindIII AAGCTT 1 cut(s) 2623
HpaII CCGG 2 cut(s) 111, 234
HphI GGTGA 6 cut(s) 281, 1202, 1214, 2190, 2990, 3239
Hpy166II GTNNAC 7 cut(s) 478, 1338, 1743, 2260, 2326, 2493, 2733
Hpy8I GTNNAC 7 cut(s) 478, 1338, 1743, 2260, 2326, 2493, 2733
Hpy99I CGWCG 1 cut(s) 45
HpyCH4III ACNGT 7 cut(s) 305, 475, 524, 1521, 1621, 2257, 3107
HpyCH4IV ACGT 2 cut(s) 730, 2355
HpyF10VI GCNNNNNNNGC 7 cut(s) 362, 656, 862, 979, 1169, 1494, 1805
HpySE526I ACGT 2 cut(s) 730, 2355
Hsp92II CATG 7 cut(s) 227, 802, 1344, 1392, 2017, 2216, 2290
HspAI GCGC 2 cut(s) 365, 863
KflI GGGWCCC 1 cut(s) 2188
Ksp22I TGATCA 2 cut(s) 87, 1629
LmnI GCTCC 3 cut(s) 22, 1168, 3185
Lsp1109I GCAGC 7 cut(s) 93, 643, 840, 1676, 1679, 1978, 2695
LweI GCATC 7 cut(s) 428, 544, 883, 1882, 1966, 2106, 2971
MaeII ACGT 2 cut(s) 730, 2355
MaeIII GTNAC 8 cut(s) 118, 283, 1190, 1452, 1615, 2896, 3107, 3218
MfeI CAATTG 1 cut(s) 169
MflI RGATCY 5 cut(s) 1142, 1749, 2145, 3009, 3140
MhlI GDGCHC 4 cut(s) 325, 772, 1329, 2403
MluI ACGCGT 1 cut(s) 3079
MlyI GAGTC 6 cut(s) 305, 763, 1046, 1103, 3109, 3193
MmeI TCCRAC 3 cut(s) 771, 1006, 2556
Mph1103I ATGCAT 2 cut(s) 1390, 2335
MseI TTAA 7 cut(s) 447, 1011, 1196, 2387, 2502, 3125, 3137
MslI CAYNNNNRTG 3 cut(s) 1236, 2645, 3225
MspCI CTTAAG 1 cut(s) 3136
MspI CCGG 2 cut(s) 111, 234
MspR9I CCNGG 5 cut(s) 111, 112, 235, 774, 3155
MunI CAATTG 1 cut(s) 169
Mva1269I GAATGC 6 cut(s) 19, 195, 865, 1139, 1471, 1741
MvaI CCWGG 2 cut(s) 774, 3155
MvnI CGCG 4 cut(s) 45, 618, 1636, 3081
MwoI GCNNNNNNNGC 7 cut(s) 362, 656, 862, 979, 1169, 1494, 1805
NciI CCSGG 3 cut(s) 111, 112, 235
NdeI CATATG 2 cut(s) 628, 2588
NheI GCTAGC 1 cut(s) 865
NlaIII CATG 7 cut(s) 227, 802, 1344, 1392, 2017, 2216, 2290
NlaIV GGNNCC 9 cut(s) 324, 906, 1164, 1656, 2189, 2190, 2283, 2769, 2877
NmuCI GTSAC 4 cut(s) 1190, 1615, 2896, 3218
NruI TCGCGA 1 cut(s) 45
NsiI ATGCAT 2 cut(s) 1390, 2335
NspV TTCGAA 1 cut(s) 2509
OliI CACNNNNGTG 1 cut(s) 3225
PaeR7I CTCGAG 1 cut(s) 3117
PagI TCATGA 1 cut(s) 223
PaqCI CACCTGC 1 cut(s) 1388
PceI AGGCCT 1 cut(s) 3239
PcsI WCGNNNNNNNCGW 1 cut(s) 49
PctI GAATGC 6 cut(s) 19, 195, 865, 1139, 1471, 1741
PflFI GACNNNGTC 2 cut(s) 131, 146
PflMI CCANNNNNTGG 1 cut(s) 1943
PkrI GCNGC 7 cut(s) 83, 658, 855, 1666, 1669, 1993, 2710
PleI GAGTC 6 cut(s) 304, 762, 1045, 1102, 3109, 3193
PpsI GAGTC 6 cut(s) 304, 762, 1045, 1102, 3109, 3193
PpuMI RGGWCCY 1 cut(s) 2188
PshBI ATTAAT 2 cut(s) 2502, 3125
Psp124BI GAGCTC 1 cut(s) 1329
Psp5II RGGWCCY 1 cut(s) 2188
Psp6I CCWGG 2 cut(s) 772, 3153
PspGI CCWGG 2 cut(s) 772, 3153
PspN4I GGNNCC 9 cut(s) 324, 906, 1164, 1656, 2189, 2190, 2283, 2769, 2877
PspPI GGNCC 4 cut(s) 142, 1439, 2188, 2954
PspPPI RGGWCCY 1 cut(s) 2188
PsrI GAACNNNNNNTAC 2 cut(s) 3066, 3098
PstI CTGCAG 2 cut(s) 661, 2056
PstNI CAGNNNCTG 1 cut(s) 263
PsuI RGATCY 5 cut(s) 1142, 1749, 2145, 3009, 3140
PsyI GACNNNGTC 2 cut(s) 131, 146
RruI TCGCGA 1 cut(s) 45
RsaI GTAC 2 cut(s) 72, 2012
RsaNI GTAC 2 cut(s) 71, 2011
RseI CAYNNNNRTG 3 cut(s) 1236, 2645, 3225
SacI GAGCTC 1 cut(s) 1329
SaqAI TTAA 7 cut(s) 447, 1011, 1196, 2387, 2502, 3125, 3137
SatI GCNGC 7 cut(s) 82, 657, 854, 1665, 1668, 1992, 2709
Sau96I GGNCC 4 cut(s) 142, 1439, 2188, 2954
SchI GAGTC 6 cut(s) 305, 763, 1046, 1103, 3109, 3193
ScrFI CCNGG 5 cut(s) 111, 112, 235, 774, 3155
SduI GDGCHC 4 cut(s) 325, 772, 1329, 2403
SfaNI GCATC 7 cut(s) 428, 544, 883, 1882, 1966, 2106, 2971
SfcI CTRYAG 4 cut(s) 474, 657, 2052, 2712
Sfr274I CTCGAG 1 cut(s) 3117
SfuI TTCGAA 1 cut(s) 2509
SinI GGWCC 3 cut(s) 142, 1439, 2188
SlaI CTCGAG 1 cut(s) 3117
SmaI CCCGGG 1 cut(s) 112
SmiMI CAYNNNNRTG 3 cut(s) 1236, 2645, 3225
SmlI CTYRAG 6 cut(s) 1138, 1322, 2003, 3014, 3117, 3136
SmoI CTYRAG 6 cut(s) 1138, 1322, 2003, 3014, 3117, 3136
SseBI AGGCCT 1 cut(s) 3239
SsiI CCGC 7 cut(s) 116, 326, 350, 616, 1636, 2617, 3036
SspI AATATT 2 cut(s) 2506, 3213
SstI GAGCTC 1 cut(s) 1329
StuI AGGCCT 1 cut(s) 3239
StyD4I CCNGG 5 cut(s) 109, 110, 233, 772, 3153
StyI CCWWGG 1 cut(s) 2468
TaaI ACNGT 7 cut(s) 305, 475, 524, 1521, 1621, 2257, 3107
TaiI ACGT 2 cut(s) 733, 2358
TaqII GACCGA 1 cut(s) 1979
TatI WGTACW 1 cut(s) 2010
Tru1I TTAA 7 cut(s) 447, 1011, 1196, 2387, 2502, 3125, 3137
Tru9I TTAA 7 cut(s) 447, 1011, 1196, 2387, 2502, 3125, 3137
TscAI CASTG 9 cut(s) 157, 565, 1024, 1117, 1220, 1273, 2740, 2829, 2925
TseFI GTSAC 4 cut(s) 1190, 1615, 2896, 3218
TseI GCWGC 7 cut(s) 81, 656, 853, 1664, 1667, 1991, 2708
Tsp45I GTSAC 4 cut(s) 1190, 1615, 2896, 3218
TspDTI ATGAA 6 cut(s) 263, 645, 1361, 1884, 1898, 3016
TspGWI ACGGA 6 cut(s) 1060, 1305, 1391, 1935, 2858, 2924
TspMI CCCGGG 1 cut(s) 110
TspRI CASTG 9 cut(s) 157, 565, 1024, 1117, 1220, 1273, 2740, 2829, 2925
Tth111I GACNNNGTC 2 cut(s) 131, 146
Van91I CCANNNNNTGG 1 cut(s) 1943
Vha464I CTTAAG 1 cut(s) 3136
VpaK11BI GGWCC 3 cut(s) 142, 1439, 2188
VspI ATTAAT 2 cut(s) 2502, 3125
XapI RAATTY 1 cut(s) 941
XbaI TCTAGA 3 cut(s) 61, 910, 1475
XcmI CCANNNNNNNNNTGG 1 cut(s) 1220
XhoI CTCGAG 1 cut(s) 3117
XmaI CCCGGG 1 cut(s) 110
XmaJI CCTAGG 1 cut(s) 2468
XmiI GTMKAC 2 cut(s) 477, 2492
Zsp2I ATGCAT 2 cut(s) 1390, 2335
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.