RLG00000030074

Plant family of unknown function (DUF810)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0005738
Physical Location & Seq
Forward (+)
54525740 .. 54542533
16794 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030074

Sequence Viewer

Length: 3336 bp
ATGGACGAGGAAAATGCTGTGGAGCTTTTACAGAGGTTTCGCCGCGACAGGCGAATACTGCTTGATTTTGTACTAGCTGGTAGCTTAATCAAGAAGGTCATAATGCCTCCCGGGGCGGTTACGCTGGACGATGTGGATCTAGACCAAGTCAGTGTTGATTATGTGCTCAATTGTGCTAAGAAAGGTGGAATGCTTGAACTGTCTGAGGCTATTAGGGACTATCATGACCATACCGGGTTGCCTCAAATGAATAATTCCGGTTCTGCTGGTGAATACTTTTTGGTTACGAATCCTGAGTCTTACGGTTCTCCTCCAAAGAGGGCACCACCACCTGTTCCAGACTACACACCGCCTCCTGTTCTCGCGCCACCTCCTGTAATCACACCATCTATTCCAGACCTTGACTCATCTCCAGTCGCATCGAATATATCACAATCTGAATCTTTTAACTCCACACAAGTTCGAGAACTTACTGTAGATGATATTGAAGATTTTGAGGATGATGATTTAGATGAGACTGACAGTCTCAGGATTTCAAGAAGGATTCGTAATGATGCTGCTGATCTTGCTCTTGGACTGCCTTCTTTTAAAACAGGTATCATAGAAGATGATCTCCGCGAGACTGCATATGAAATCCTCTTGGCGTGTGCTGGCGCTGCAGGGGGTCTCATTGTGCCATCAAAAGAGAAAAAGAAAGACAAAAGGTCAAAGCTGATGAGGAAACTAGGACGTAGTAGAAGTGAAAATGTTGTGAGTCAGTCTCAACGAGCACCTGGGATGGTTGGTTTGTTGGAGGCCATGCGTGTCCAGATGGAGATATCGGAGGCAATGGACATCAGAACTAGACAAGGGCTGCTGAATGCACTAGCAGGAAAAGTGGGAAAAAGAATGGATGCCCTACTAGTCCCTTTGGAACTTTTATGTTGTATTTCACGGTCAGAATTTTCTGACAAGAAGGCTTATATACGATGGCAGAAAAGGCAGTTGAATATACTAGAGGAGGGGCTTCTTAATCACACTGCTGTTGGATTTGGGGAGTCTGGACGGAAGGCGAGTGAGTTGAGGATTCTTTTAGCAAAGATTGAAGAATCTGAGTCTCTTCCACCCTCCACTGGAGAACTCCAACGAACAGAATGCTTGAGATCTCTTCGAGAGATTACTGCTCCACTTGCTGAGAGGCCTGCTCGGGGTGACTTGACTGGTGAAGTATGCCACTGGGCAGATGGTTATCATTTGAATGTTAGACTATATGAGAAGCTGCTTGTCAGTGTCTTCGATATGTTAGACGAGGGAAAGCTAACTGAGGAAGTGGAAGAAATACTTGAGCTCTTGAAGTCAACATGGCGTGTTTTAGGAATCACGGAGACCATTCATTACACCAGCTATGCATGGGTCTTATTCCGTCAGCATGTTGTCACCAGTGAGCAAGGAATTTTACAACATGCCATTGAACAGTTAAAGAAAATACCATTGAAGGAACAAAGGGGACCGCAAGAGAGGTTACACTTGAAAAGTTTGCTTTCCAGAGTTGAAGGCAAACAGGGCTACCAAGATTTGTCTTTCTTACAGTCCTTTTTGTCTCCCATTCAGAAATGGGCTGATAAGCAACTTGGAGACTACCACCTGCACTTCGCTGAGGTGCCGGTTATGATGGAGAATATAGTGACAGTTGCAATGATTACTCGGAGGCTTCTTCTGGAGGAACCTGAAGCAGCAACGATGCAATCTACATCTGCCACTGATCGAGATCAAATAGAATCTTATATATCATCTTCTATCAAGAATGCATTTACAAGGATCTTGCAATCTCTTGAAAAATCAGACACCAAGCACGAACATCATTTGGCATTGCTTGCTGAAGAGACCAAGAAACTTTTGAAAAAGGACGCGACCTTGTTTATGCCAATTTTATCTCAGAGGCATCCACAAGCAACTGCTGTCTCATGCTCGCTTCTTCATAGGCTTTATGGCAACAAGTTGAAACCTTTTCTTGGTGTTGCTGAGCATCTGACCGAGGATGTGGTATCTGTATTTCCTGCCGCCGATGACCTTGAGCAGTCCATTATGGAACTTATTTTGTCGTCTTGTGGAGAGGAAACTGCAGAGATATACTCTAGAAAAATAGTTCCTTACCAGATTGAGTCTATATCTGGAACATTAGTGATGCGTTGGGTCAATTCACAACTTGCGAGGATCTTAGGTTGGGTTGAACGGGCTATTCAACAAGAGAGGTGGGACCCAATATCACCTCAACAGCGGCATGGGAGTTCAATAGTTGAAGTATTTAGAATTGTGGAGGAGACTGTTGACCAATTTTTTGAGCTCAAGGTTCCAATGAGGTCTTCAGAATTGAGTAGCCTGTTTCGTGGAGTTGACAATGCATTTCAAGTTTATGCAAATCACGTCATTGACAAATTGGCTACTAAGGAGGACTTAATCCCACCCGTGCCCATTCTCACTCGATACAAGAAGGAAGCTGGCATAAAGGCTTTTGTAAAAAAGGAACTATTTGACCCTAGGTTGCCTGATGAGAGAAGGTCTACTGAAATTAATGTTCGAACCACTCCAACCCTCTGTGTTCAATTGAACACACTTTATTATGCAATCAATGAGCTGAATAAGTTGGAAGATGGCATTTGGGAGCGATGGATGAGGAAGAAGCCCCGCCAAAAGTTTATGAAGAAATCCTTAGATGAGAAATCTAAAAGTTTCATGCAGAAGGACACATTTGATGGGAGTAGGAAAGATATAAACGCTGCTATAGACCGAATATGCGAGTTCACTGGAACTAAAATTATCTTTTGGGATTTGAGGGAACCATTTATCAACAACTTATATAAACCAAGTGTTTCTCTTTCTAGGTTCGAGGCAGTGATCGAACCACTTGATATGGAACTTGGTCAACTATGTGATATAATTGTGGAACCACTCAGGGATCGTATTGTGACAAGTCTCCTTCAAGCAACACTGGATGGCTTACTCCGTGTCCTATTAGATGGGGGCCCATCCCGAGTTTTCTCTTTGGGCGATGGAAAGCTATTAGAAGAAGATTTAGAGGTCCTCAAGGAGTTTTTTATCTCTGGTGGAGATGGGCTTCCACGAGGAGTGGTCGAAAATCAGGTATCACGTGTTCGGCTTGTGGTAAAGTTGCACAGTTGCGAGACTCGAGAACTGATCGACGACTTAAAATCTTCAAGCGGCCTGGAACTGCAGGGTGGTAGAAGCAAACTAGGAGCTGATTCTAAGACTCTATTGCGAATATTATGTCACAGGGGTGATTCAGAGGCCTCCCAATTTGTCAAGAAACAATACAAGATCCCGAAGTCCGCTGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005911 GO:0008150 GO:0009506 GO:0009987 GO:0010118 GO:0016020 GO:0030054 GO:0044424 GO:0044464 GO:0055044 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF810

Protein Analysis

1112

Amino Acids

125.42

Weight (kDa)

5.75

Isoelectric Point (pI)

53.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_PATROL1 PF25761 719 - 1109 1.5e-126 PATROL1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1632
Acc36I ACCTGC 1 cut(s) 1632
AccB1I GGYRCC 2 cut(s) 322, 1639
AccI GTMKAC 1 cut(s) 2540
AccII CGCG 4 cut(s) 45, 365, 618, 1889
AclWI GGATC 5 cut(s) 144, 1805, 2201, 2943, 3310
AcsI RAATTY 2 cut(s) 941, 1431
AcuI CTGAAG 3 cut(s) 1728, 1878, 2328
AcvI CACGTG 1 cut(s) 3128
AfaI GTAC 1 cut(s) 72
AfiI CCNNNNNNNGG 3 cut(s) 1112, 1187, 1991
AflIII ACRYGT 1 cut(s) 3127
AhdI GACNNNNNGTC 2 cut(s) 522, 703
AhlI ACTAGT 1 cut(s) 901
AjiI CACGTC 1 cut(s) 2404
AjnI CCWGG 2 cut(s) 772, 3201
AjuI GAANNNNNNNTTGG 2 cut(s) 2326, 2358
AleI CACNNNNGTG 1 cut(s) 3273
Alw21I GWGCWC 4 cut(s) 168, 772, 1329, 2325
AlwI GGATC 5 cut(s) 144, 1805, 2201, 2943, 3310
Ama87I CYCGRG 4 cut(s) 110, 1185, 3009, 3165
AoxI GGCC 5 cut(s) 795, 1178, 3001, 3199, 3285
ApaI GGGCCC 1 cut(s) 3005
ApeKI GCWGC 7 cut(s) 557, 656, 853, 1258, 1712, 2756, 3329
ApoI RAATTY 2 cut(s) 941, 1431
ArsI GACNNNNNNTTYG 6 cut(s) 281, 313, 2300, 2332, 3250, 3282
AseI ATTAAT 1 cut(s) 2550
AspA2I CCTAGG 1 cut(s) 2516
AspLEI GCGC 2 cut(s) 367, 656
AspS9I GGNCC 5 cut(s) 1487, 2236, 3001, 3002, 3058
AsuC2I CCSGG 3 cut(s) 111, 112, 235
AsuHPI GGTGA 6 cut(s) 281, 1202, 1214, 1408, 2238, 3287
AsuII TTCGAA 1 cut(s) 2557
AvaI CYCGRG 4 cut(s) 110, 1185, 3009, 3165
AvaII GGWCC 3 cut(s) 1487, 2236, 3058
AvrII CCTAGG 1 cut(s) 2516
BaeGI GKGCMC 3 cut(s) 325, 2451, 3005
BanI GGYRCC 2 cut(s) 322, 1639
BanII GRGCYC 3 cut(s) 1329, 2325, 3005
BauI CACGAG 1 cut(s) 3099
BbrPI CACGTG 1 cut(s) 3128
BbsI GAAGAC 2 cut(s) 1264, 2334
Bbv12I GWGCWC 4 cut(s) 168, 772, 1329, 2325
BbvCI CCTCAGC 1 cut(s) 1635
BbvI GCAGC 7 cut(s) 544, 643, 840, 1245, 1724, 2743, 3316
BcgI CGANNNNNNTGC 3 cut(s) 30, 1116, 1150
BciT130I CCWGG 2 cut(s) 774, 3203
BcnI CCSGG 3 cut(s) 111, 112, 235
BcuI ACTAGT 1 cut(s) 901
BfmI CTRYAG 5 cut(s) 474, 657, 2100, 2760, 3209
BfoI RGCGCY 1 cut(s) 657
BfuAI ACCTGC 1 cut(s) 1632
BglII AGATCT 1 cut(s) 1142
BlnI CCTAGG 1 cut(s) 2516
BlpI GCTNAGC 1 cut(s) 2001
Bme1390I CCNGG 5 cut(s) 111, 112, 235, 774, 3203
Bme18I GGWCC 3 cut(s) 1487, 2236, 3058
BmeRI GACNNNNNGTC 2 cut(s) 522, 703
BmeT110I CYCGRG 4 cut(s) 110, 1185, 3009, 3165
BmgBI CACGTC 1 cut(s) 2404
BmgT120I GGNCC 5 cut(s) 1487, 2236, 3001, 3002, 3058
BmrFI CCNGG 5 cut(s) 111, 112, 235, 774, 3203
BmrI ACTGGG 1 cut(s) 1225
BmsI GCATC 7 cut(s) 428, 544, 883, 1710, 1930, 2014, 2154
BmuI ACTGGG 1 cut(s) 1225
BpiI GAAGAC 2 cut(s) 1264, 2334
BplI GAGNNNNNCTC 6 cut(s) 745, 777, 1168, 1200, 2096, 2128
BpmI CTGGAG 3 cut(s) 396, 1134, 1718
Bpu10I CCTNAGC 1 cut(s) 1635
Bpu1102I GCTNAGC 1 cut(s) 2001
Bpu14I TTCGAA 1 cut(s) 2557
BpuEI CTTGAG 5 cut(s) 1159, 1343, 2072, 2309, 3047
BpuMI CCSGG 3 cut(s) 111, 112, 235
BsaAI YACGTR 1 cut(s) 3128
BsaBI GATNNNNATC 3 cut(s) 135, 1227, 1746
BsaI GGTCTC 3 cut(s) 671, 1358, 1856
BsaJI CCNNGG 5 cut(s) 110, 111, 773, 2013, 2516
BsaWI WCCGGW 1 cut(s) 257
BsaXI ACNNNNNCTCC 2 cut(s) 337, 367
Bsc4I CCNNNNNNNGG 3 cut(s) 1112, 1187, 1991
Bse118I RCCGGY 1 cut(s) 1642
Bse1I ACTGG 7 cut(s) 413, 1117, 1204, 1220, 1419, 2788, 2973
Bse3DI GCAATG 3 cut(s) 834, 1680, 1847
Bse8I GATNNNNATC 3 cut(s) 135, 1227, 1746
BseBI CCWGG 2 cut(s) 774, 3203
BseDI CCNNGG 5 cut(s) 110, 111, 773, 2013, 2516
BseGI GGATG 8 cut(s) 505, 783, 898, 1921, 2023, 2655, 2977, 3005
BseJI GATNNNNATC 3 cut(s) 135, 1227, 1746
BseLI CCNNNNNNNGG 3 cut(s) 1112, 1187, 1991
BseMI GCAATG 3 cut(s) 834, 1680, 1847
BseNI ACTGG 7 cut(s) 413, 1117, 1204, 1220, 1419, 2788, 2973
BseRI GAGGAG 4 cut(s) 300, 1013, 2312, 3117
BseSI GKGCMC 3 cut(s) 325, 2451, 3005
BseXI GCAGC 7 cut(s) 544, 643, 840, 1245, 1724, 2743, 3316
BsgI GTGCAG 1 cut(s) 1610
Bsh1236I CGCG 4 cut(s) 45, 365, 618, 1889
BshFI GGCC 5 cut(s) 797, 1180, 3003, 3201, 3287
BshNI GGYRCC 2 cut(s) 322, 1639
BsiHKAI GWGCWC 4 cut(s) 168, 772, 1329, 2325
BsiHKCI CYCGRG 4 cut(s) 110, 1185, 3009, 3165
BsiSI CCGG 4 cut(s) 111, 234, 258, 1643
BslFI GGGAC 4 cut(s) 230, 890, 1500, 2249
BslI CCNNNNNNNGG 3 cut(s) 1112, 1187, 1991
BsmFI GGGAC 4 cut(s) 230, 890, 1500, 2249
BsmI GAATGC 4 cut(s) 195, 865, 1139, 1789
BsnI GGCC 5 cut(s) 797, 1180, 3003, 3201, 3287
Bso31I GGTCTC 3 cut(s) 671, 1358, 1856
BsoBI CYCGRG 4 cut(s) 110, 1185, 3009, 3165
Bsp119I TTCGAA 1 cut(s) 2557
Bsp120I GGGCCC 1 cut(s) 3001
Bsp1286I GDGCHC 7 cut(s) 168, 325, 772, 1329, 2325, 2451, 3005
Bsp1720I GCTNAGC 1 cut(s) 2001
BspANI GGCC 5 cut(s) 797, 1180, 3003, 3201, 3287
BspFNI CGCG 4 cut(s) 45, 365, 618, 1889
BspHI TCATGA 1 cut(s) 223
BspMAI CTGCAG 3 cut(s) 661, 2104, 3213
BspMI ACCTGC 1 cut(s) 1632
BspPI GGATC 5 cut(s) 144, 1805, 2201, 2943, 3310
BspT104I TTCGAA 1 cut(s) 2557
BspT107I GGYRCC 2 cut(s) 322, 1639
BspTNI GGTCTC 3 cut(s) 671, 1358, 1856
BsrDI GCAATG 3 cut(s) 834, 1680, 1847
BsrFI RCCGGY 1 cut(s) 1642
BsrI ACTGG 7 cut(s) 413, 1117, 1204, 1220, 1419, 2788, 2973
BssAI RCCGGY 1 cut(s) 1642
BssECI CCNNGG 5 cut(s) 110, 111, 773, 2013, 2516
BssSI CACGAG 1 cut(s) 3099
BssT1I CCWWGG 1 cut(s) 2516
Bst2BI CACGAG 1 cut(s) 3099
Bst2UI CCWGG 2 cut(s) 774, 3203
Bst6I CTCTTC 3 cut(s) 1104, 1152, 1854
BstAPI GCANNNNNTGC 1 cut(s) 1853
BstBAI YACGTR 1 cut(s) 3128
BstBI TTCGAA 1 cut(s) 2557
BstC8I GCNNGC 5 cut(s) 652, 1182, 1854, 1949, 2479
BstF5I GGATG 8 cut(s) 505, 783, 898, 1921, 2023, 2655, 2977, 3005
BstFNI CGCG 4 cut(s) 45, 365, 618, 1889
BstH2I RGCGCY 1 cut(s) 657
BstHHI GCGC 2 cut(s) 367, 656
BstMWI GCNNNNNNNGC 7 cut(s) 58, 566, 656, 979, 1169, 1542, 1853
BstNI CCWGG 2 cut(s) 774, 3203
BstNSI RCATGY 2 cut(s) 1412, 1445
BstSCI CCNGG 5 cut(s) 109, 110, 233, 772, 3201
BstSFI CTRYAG 5 cut(s) 474, 657, 2100, 2760, 3209
BstSLI GKGCMC 3 cut(s) 325, 2451, 3005
BstUI CGCG 4 cut(s) 45, 365, 618, 1889
BstV1I GCAGC 7 cut(s) 544, 643, 840, 1245, 1724, 2743, 3316
BstV2I GAAGAC 2 cut(s) 1264, 2334
BstX2I RGATCY 5 cut(s) 136, 1142, 1797, 2193, 3315
BstYI RGATCY 5 cut(s) 136, 1142, 1797, 2193, 3315
BsuRI GGCC 5 cut(s) 797, 1180, 3003, 3201, 3287
BtgZI GCGATG 2 cut(s) 2659, 3042
BtrI CACGTC 1 cut(s) 2404
BtsCI GGATG 8 cut(s) 505, 783, 898, 1921, 2023, 2655, 2977, 3005
BtsI GCAGTG 2 cut(s) 1017, 2877
BveI ACCTGC 1 cut(s) 1632
Cac8I GCNNGC 5 cut(s) 652, 1182, 1854, 1949, 2479
CciI TCATGA 1 cut(s) 223
CfoI GCGC 2 cut(s) 367, 656
Cfr10I RCCGGY 1 cut(s) 1642
Cfr13I GGNCC 5 cut(s) 1487, 2236, 3001, 3002, 3058
Cfr9I CCCGGG 1 cut(s) 110
CseI GACGC 1 cut(s) 1895
Csp6I GTAC 1 cut(s) 71
CspCI CAANNNNNGTGG 2 cut(s) 2213, 2248
CviAII CATG 9 cut(s) 224, 799, 1341, 1389, 1409, 1442, 1944, 2261, 2713
CviQI GTAC 1 cut(s) 71
DraI TTTAAA 1 cut(s) 589
DriI GACNNNNNGTC 2 cut(s) 522, 703
Eam1104I CTCTTC 3 cut(s) 1104, 1152, 1854
Eam1105I GACNNNNNGTC 2 cut(s) 522, 703
EarI CTCTTC 3 cut(s) 1104, 1152, 1854
Ecl136II GAGCTC 2 cut(s) 1327, 2323
Eco130I CCWWGG 1 cut(s) 2516
Eco147I AGGCCT 2 cut(s) 1180, 3287
Eco24I GRGCYC 3 cut(s) 1329, 2325, 3005
Eco31I GGTCTC 3 cut(s) 671, 1358, 1856
Eco32I GATATC 1 cut(s) 819
Eco47I GGWCC 3 cut(s) 1487, 2236, 3058
Eco53kI GAGCTC 2 cut(s) 1327, 2323
Eco57I CTGAAG 3 cut(s) 1728, 1878, 2328
Eco72I CACGTG 1 cut(s) 3128
Eco88I CYCGRG 4 cut(s) 110, 1185, 3009, 3165
EcoICRI GAGCTC 2 cut(s) 1327, 2323
EcoO109I RGGNCCY 3 cut(s) 2236, 3001, 3058
EcoRII CCWGG 2 cut(s) 772, 3201
EcoRV GATATC 1 cut(s) 819
EcoT14I CCWWGG 1 cut(s) 2516
EcoT22I ATGCAT 3 cut(s) 1390, 1789, 2383
EcoT38I GRGCYC 3 cut(s) 1329, 2325, 3005
ErhI CCWWGG 1 cut(s) 2516
FaeI CATG 9 cut(s) 227, 802, 1344, 1392, 1412, 1445, 1947, 2264, 2716
FalI AAGNNNNNCTT 6 cut(s) 1305, 1337, 2417, 2449, 2672, 2704
FaqI GGGAC 4 cut(s) 230, 890, 1500, 2249
FatI CATG 9 cut(s) 223, 798, 1340, 1388, 1408, 1441, 1943, 2260, 2712
FauI CCCGC 1 cut(s) 2672
FauNDI CATATG 1 cut(s) 628
FblI GTMKAC 1 cut(s) 2540
FokI GGATG 8 cut(s) 512, 790, 905, 1908, 2030, 2662, 2984, 2992
FriOI GRGCYC 3 cut(s) 1329, 2325, 3005
GlaI GCGC 2 cut(s) 366, 655
GsuI CTGGAG 3 cut(s) 396, 1134, 1718
HaeII RGCGCY 1 cut(s) 657
HaeIII GGCC 5 cut(s) 797, 1180, 3003, 3201, 3287
HapII CCGG 4 cut(s) 111, 234, 258, 1643
HgaI GACGC 1 cut(s) 1895
HhaI GCGC 2 cut(s) 367, 656
Hin1II CATG 9 cut(s) 227, 802, 1344, 1392, 1412, 1445, 1947, 2264, 2716
Hin6I GCGC 2 cut(s) 365, 654
HinP1I GCGC 2 cut(s) 365, 654
HincII GTYRAC 4 cut(s) 1338, 2308, 2374, 2903
HindII GTYRAC 4 cut(s) 1338, 2308, 2374, 2903
HpaII CCGG 4 cut(s) 111, 234, 258, 1643
HphI GGTGA 6 cut(s) 281, 1202, 1214, 1408, 2238, 3287
Hpy166II GTNNAC 6 cut(s) 1338, 2308, 2374, 2541, 2781, 2903
Hpy8I GTNNAC 6 cut(s) 1338, 2308, 2374, 2541, 2781, 2903
Hpy99I CGWCG 1 cut(s) 3182
HpyCH4IV ACGT 3 cut(s) 730, 2403, 3127
HpyF10VI GCNNNNNNNGC 7 cut(s) 58, 566, 656, 979, 1169, 1542, 1853
HpySE526I ACGT 3 cut(s) 730, 2403, 3127
Hsp92II CATG 9 cut(s) 227, 802, 1344, 1392, 1412, 1445, 1947, 2264, 2716
HspAI GCGC 2 cut(s) 365, 654
KflI GGGWCCC 1 cut(s) 2236
LmnI GCTCC 4 cut(s) 22, 1168, 2641, 3233
Lsp1109I GCAGC 7 cut(s) 544, 643, 840, 1245, 1724, 2743, 3316
LweI GCATC 7 cut(s) 428, 544, 883, 1710, 1930, 2014, 2154
MaeII ACGT 3 cut(s) 730, 2403, 3127
MaeIII GTNAC 8 cut(s) 118, 283, 1190, 1414, 1500, 1663, 2944, 3266
MfeI CAATTG 2 cut(s) 169, 2582
MflI RGATCY 5 cut(s) 136, 1142, 1797, 2193, 3315
MhlI GDGCHC 7 cut(s) 168, 325, 772, 1329, 2325, 2451, 3005
MlyI GAGTC 8 cut(s) 305, 398, 763, 1046, 1103, 2150, 3157, 3241
MmeI TCCRAC 5 cut(s) 771, 1006, 1147, 2591, 2604
Mph1103I ATGCAT 3 cut(s) 1390, 1789, 2383
MseI TTAA 8 cut(s) 86, 447, 588, 1011, 1457, 2435, 2550, 3185
MslI CAYNNNNRTG 2 cut(s) 1236, 3273
MspA1I CMGCKG 2 cut(s) 2257, 3329
MspI CCGG 4 cut(s) 111, 234, 258, 1643
MspR9I CCNGG 5 cut(s) 111, 112, 235, 774, 3203
MunI CAATTG 2 cut(s) 169, 2582
Mva1269I GAATGC 4 cut(s) 195, 865, 1139, 1789
MvaI CCWGG 2 cut(s) 774, 3203
MvnI CGCG 4 cut(s) 45, 365, 618, 1889
MwoI GCNNNNNNNGC 7 cut(s) 58, 566, 656, 979, 1169, 1542, 1853
NciI CCSGG 3 cut(s) 111, 112, 235
NdeI CATATG 1 cut(s) 628
NlaIII CATG 9 cut(s) 227, 802, 1344, 1392, 1412, 1445, 1947, 2264, 2716
NmuCI GTSAC 5 cut(s) 1190, 1414, 1663, 2944, 3266
NsiI ATGCAT 3 cut(s) 1390, 1789, 2383
NspI RCATGY 2 cut(s) 1412, 1445
NspV TTCGAA 1 cut(s) 2557
OliI CACNNNNGTG 1 cut(s) 3273
PaeR7I CTCGAG 1 cut(s) 3165
PagI TCATGA 1 cut(s) 223
PaqCI CACCTGC 1 cut(s) 1632
PceI AGGCCT 2 cut(s) 1180, 3287
PctI GAATGC 4 cut(s) 195, 865, 1139, 1789
PfeI GAWTC 9 cut(s) 289, 440, 544, 1066, 1088, 1356, 1757, 3239, 3278
PflFI GACNNNGTC 1 cut(s) 146
PleI GAGTC 8 cut(s) 304, 398, 762, 1045, 1102, 2149, 3157, 3241
PmaCI CACGTG 1 cut(s) 3128
PmlI CACGTG 1 cut(s) 3128
PpsI GAGTC 8 cut(s) 304, 398, 762, 1045, 1102, 2149, 3157, 3241
Ppu21I YACGTR 1 cut(s) 3128
PpuMI RGGWCCY 2 cut(s) 2236, 3058
PshBI ATTAAT 1 cut(s) 2550
Psp124BI GAGCTC 2 cut(s) 1329, 2325
Psp5II RGGWCCY 2 cut(s) 2236, 3058
Psp6I CCWGG 2 cut(s) 772, 3201
PspCI CACGTG 1 cut(s) 3128
PspGI CCWGG 2 cut(s) 772, 3201
PspOMI GGGCCC 1 cut(s) 3001
PspPI GGNCC 5 cut(s) 1487, 2236, 3001, 3002, 3058
PspPPI RGGWCCY 2 cut(s) 2236, 3058
PsrI GAACNNNNNNTAC 2 cut(s) 3114, 3146
PstI CTGCAG 3 cut(s) 661, 2104, 3213
PsuI RGATCY 5 cut(s) 136, 1142, 1797, 2193, 3315
PsyI GACNNNGTC 1 cut(s) 146
RsaI GTAC 1 cut(s) 72
RsaNI GTAC 1 cut(s) 71
RseI CAYNNNNRTG 2 cut(s) 1236, 3273
SacI GAGCTC 2 cut(s) 1329, 2325
SaqAI TTAA 8 cut(s) 86, 447, 588, 1011, 1457, 2435, 2550, 3185
Sau96I GGNCC 5 cut(s) 1487, 2236, 3001, 3002, 3058
SchI GAGTC 8 cut(s) 305, 398, 763, 1046, 1103, 2150, 3157, 3241
ScrFI CCNGG 5 cut(s) 111, 112, 235, 774, 3203
SduI GDGCHC 7 cut(s) 168, 325, 772, 1329, 2325, 2451, 3005
SfaNI GCATC 7 cut(s) 428, 544, 883, 1710, 1930, 2014, 2154
SfcI CTRYAG 5 cut(s) 474, 657, 2100, 2760, 3209
Sfr274I CTCGAG 1 cut(s) 3165
SfuI TTCGAA 1 cut(s) 2557
SinI GGWCC 3 cut(s) 1487, 2236, 3058
SlaI CTCGAG 1 cut(s) 3165
SmaI CCCGGG 1 cut(s) 112
SmiMI CAYNNNNRTG 2 cut(s) 1236, 3273
SmlI CTYRAG 6 cut(s) 1138, 1322, 2051, 2324, 3062, 3165
SmoI CTYRAG 6 cut(s) 1138, 1322, 2051, 2324, 3062, 3165
SpeI ACTAGT 1 cut(s) 901
SseBI AGGCCT 2 cut(s) 1180, 3287
SspI AATATT 1 cut(s) 3261
SstI GAGCTC 2 cut(s) 1329, 2325
StuI AGGCCT 2 cut(s) 1180, 3287
StyD4I CCNGG 5 cut(s) 109, 110, 233, 772, 3201
StyI CCWWGG 1 cut(s) 2516
TaiI ACGT 3 cut(s) 733, 2406, 3130
TaqII GACCGA 2 cut(s) 2027, 2781
TatI WGTACW 1 cut(s) 70
TauI GCSGC 4 cut(s) 45, 2042, 2260, 3201
TfiI GAWTC 9 cut(s) 289, 440, 544, 1066, 1088, 1356, 1757, 3239, 3278
Tru1I TTAA 8 cut(s) 86, 447, 588, 1011, 1457, 2435, 2550, 3185
Tru9I TTAA 8 cut(s) 86, 447, 588, 1011, 1457, 2435, 2550, 3185
TseFI GTSAC 5 cut(s) 1190, 1414, 1663, 2944, 3266
TseI GCWGC 7 cut(s) 557, 656, 853, 1258, 1712, 2756, 3329
Tsp45I GTSAC 5 cut(s) 1190, 1414, 1663, 2944, 3266
TspDTI ATGAA 6 cut(s) 263, 645, 1361, 1946, 2693, 2701
TspGWI ACGGA 4 cut(s) 1060, 1376, 1391, 2972
TspMI CCCGGG 1 cut(s) 110
Tth111I GACNNNGTC 1 cut(s) 146
VpaK11BI GGWCC 3 cut(s) 1487, 2236, 3058
VspI ATTAAT 1 cut(s) 2550
XapI RAATTY 2 cut(s) 941, 1431
XbaI TCTAGA 2 cut(s) 139, 2114
XceI RCATGY 2 cut(s) 1412, 1445
XcmI CCANNNNNNNNNTGG 1 cut(s) 1220
XhoI CTCGAG 1 cut(s) 3165
XmaI CCCGGG 1 cut(s) 110
XmaJI CCTAGG 1 cut(s) 2516
XmiI GTMKAC 1 cut(s) 2540
Zsp2I ATGCAT 3 cut(s) 1390, 1789, 2383
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.