MD07G1046600.v1.1

Plant family of unknown function (DUF810)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0005738
Physical Location & Seq
Forward (+)
3958558 .. 3973632
15075 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1046600.v1.1.491

Sequence Viewer

Length: 3336 bp
ATGGACGAGGAAAATGCGGTGGAGCTTTTACAGCGGTTTCGCCGCGACAGGCGCCTACTTCTTGATTTTATACTTGCGGGTAGCTTGATTAAGAAGGTTATAATGCCTCCCGGTGCGGTTACGCTGGATGATGTGGATCTAGACCAAGTCAGTGTTGATTATGTGCTCAATTGTGCTAAGAAAGGTGGAATGCTTGAACTTTCGGAAGCTATTAGAGACTACCATGACCATACTGGGTTGCCCCAAATGAACAATACAGGTTCTGCTGGCGAATTCTTTTTGGCTACGAATCCTGACTTTTCTGGTTCTCCTCCAAAAAGGGCACCGCCTCCTGTTCCTGAGTTTGTGCCGCCTCCTGTTATCGTGCCGCCTCCTGGTGTCATATCATCTGTTCCTGACCTTGACTCATCTCCAGATGCATTAAGCGTGTCAAAATCAGAATCTTTTAACTCTACACAAGTTCAGGAACTTACGGTAGATGATATTGAAGATTTTGAGGATGATGATATTGATGAGGCTGACAGTCTCCTCATTTCACGAAGGACACGAAATGATGCTGCTGATCTTGCTCTTGGATTGCCTTCTTTTAAGACAGCTATCACAGAAGATGGTCTCCGTGAAACTGCATATGAAGTCCTTTTAGCATGTGCTGGTGCTTCAGGGGGTCTCATTGTGCCTTCAAAAGAGAAAAAGAAAGACAAAAGGTCCAAGCTGATGAGGAAACTTGGACGAAGTAGAAATGAAAATGCTTTGAGCCAGTCTCAACGAGCCCCTGGACTGGTTGGGTTATTGGAGACCATGCGTGTCCAAATGGAGATATCTGAGGCAATGGACATCAGGACTAGGCAAGGGCTGCTTAATGCCCTAGCAGGAAAAGTGGGAAAAAGAATGGATACCATACTAGTTCCTCTGGAACTTTTATGTTGTATTTCACGAACGGAATTTTCTGACAAGAAGGCGTATATACGGTGGCAGAATAGGCAGTTGAATATTTTGGAGGAGGGGCTTCTTAACTTCCCTGCTGTTGGATTTGGGGAGTCTGGACGCAAGGCGAGTGAGTTTAGGATTCTTTTAGCAAAGATTGAAGAATCTGAGTCTCTTCCACCATCCACGGGTGAACTCCAAAGAACAGAATGCTTGAGAACTCTTCGAGAGATTGCCACTCCACTTGCTGAGAGGCCTGCTCGTGGTGACTTAACTGGTGAAGTATGCCACTGGGCTGATGGTTATCACTTGAACGTTAGACTGTATGAGAAACTGCTTCTCAGTGTCTTTGATATGTTGGATGAGGGAAAGCTGACTGAGGAAGTGGAAGAAATACTCGAGCTCTTGAAGTCAACATGGCGTGTTTTAGGAATAACGGAGACCATTCATTACACCTGCTATGCATGGGTCTTGTTCCGTCAGCATGTTATTACTAGTGAGCAAGGAATTTTACAACATGCCATTGAACAGTTAAAGAAAATACCATTGAAGGAACAACGGGGACCACAGGAGAGGTCACACTTGAAGAGTTTGCATTGTAGAGTTGAAAGCGATCAGGGGTACCAAGATTTATCTTTCTTACAGTCATTCTTGTTGCCAATTCAGAAGTGGGCTGATAAGCAATTAGGAGACTACCATCTGCACTTTGCCGAGGTGCCAGGTCTGATGGAGAATATAGTAGCAGTTGCGATGATTGCTCGGAGACTTCTGCTGGAGGAACCTGAAGCAGCAATGCTGCAATCTACCTCCAACACAGATCGAGATCAGATAGAATTATATATATCATCTTCTATTAAGAACGCATTTACAAGGATCTTACATTCTGTTGAAAAATCAGACTTAAAGCATGAACATCCTTTGGCATTGCTTGCGGAAGAGACGAAGAAACTTTTGAAAAAAGATGCAACCATGTTCATGCCAATTTTATCCCAGAGGCATCCACAAGCAACTGCTGTCTCAGCCTCACTCCTTCATAGGATTTATGGCAACAAGTTGAAACCTTTTCTTGGTGCTGCTGAACATCTGACGGAAGATGTAGTATCTGTATTTCCGGCAGCTGACAACCTTGAACAATACATTATGGAACTTATTACGTCCGCTTGTGGAGAGGAAACTGCAAATGTATACTGTAGGAAAATAGCTCCATACGAGATTGAATCTATATCTGGAACATTGGTGATGCGTTGGGTCAATTCGCAACTTGGGAGGATCTTAGGTTGGGTTGAACGGTCTATTCAGCAAGAGAGGTGGGACCCAATATCGCCTCAACAGCGGCATGGGAGTTCAATCGTTGAAGTATTTAGGATTGTCGAGGAGACTGTTGACCAATTTTTTGATCTCAAGGTTCCAATGAGGCCTACAGAATTGAGTGGTTTGTTTCGCGGGGTTGACAATGCATTTCAAGTGTTTGCTAATCGTGTCATTGACAAGTTGGCTACCAAGGAGGATTTAATTCCACCAGTGCCCATTCTTACAAGATACAGGAAGGAAGTTGGAATAAAGGCTTTTGTAAAGAAGGAACTATTTGATCCTAGGCTGCCTGATGAGAGAAGGTCTACTGAAATTAATTTTAGAACGACTCCAACCCTTTGTGTTCAGTTAAACACACTTCATTATGCAATCAGCCAGCTGAATAAGTTGGAAGATAGCATTTGGGAGCGATGGACGAAGAAGCAGCCCCGCCAAAAACTTATCAAGAAATCCATGGACGAGAAGTCAAAAAGTTTCACCCAAAAGGACACGTTTGATGGCAGTAGAAAAGATGTCAATGCTGCTATAGATCGAATTTGCCAGTTCACTGGAACTAAGATTATCTTCTGGGATTTGAGGGAACCAATTATTGACAATTTATATAAACCAAGTGTTTCTCTTTCGAGGTTTGAAGCAGTGTACGAACCACTTGATACGGAACTTAGTCAACTGTGTGCTATAATTGTGGAACCACTCAGGGATCGCATTGTGACAAGTCTCCTTCAGGCAACACTGGATGGTTTACTCCGTGTTCTATTAGATGGTGGCCCTTCACGAATTTTCTCTGTGGGAGATGCAAAGCTATTAGAAGAAGATTTGGAGGTCCTCAAGGAGTTTTTCATCTCTGGAGGAGATGGGCTTCCGCGAGGAGTTGTTGAGAATCAGGTAGCACGTGTTCGGGATGTAGTAAAGTTATACAGCTACGAGACTCGAGAACTGATCGACGACTTGAAGTCTTCTGGTGGCCTGGAAATGCAGGGTAGTAGAAGCAAACTAGGGGCGGATTCTAAGACCCTATTGAGAGTATTATGTCACAGAGGTGATTCAGAGGCCTCTCAATTCCTCAAGAAACAGTACAAGATACCCAAGTCCTCGGCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005911 GO:0008150 GO:0009506 GO:0009987 GO:0010118 GO:0016020 GO:0030054 GO:0044424 GO:0044464 GO:0055044 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF810

Protein Analysis

1112

Amino Acids

125.28

Weight (kDa)

5.64

Isoelectric Point (pI)

46.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_PATROL1 PF25761 719 - 1109 7.8e-127 PATROL1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 101
AarI CACCTGC 1 cut(s) 1388
Acc36I ACCTGC 1 cut(s) 1388
Acc65I GGTACC 1 cut(s) 1545
AccB1I GGYRCC 4 cut(s) 51, 322, 1545, 1639
AccI GTMKAC 2 cut(s) 2109, 2540
AccII CGCG 3 cut(s) 45, 2367, 3100
AclI AACGTT 1 cut(s) 1239
AclWI GGATC 5 cut(s) 144, 1805, 2201, 2507, 2943
AcsI RAATTY 5 cut(s) 272, 941, 1431, 2769, 3012
AcuI CTGAAG 3 cut(s) 642, 1728, 2942
AcvI CACGTG 1 cut(s) 3128
AcyI GRCGYC 1 cut(s) 52
AfaI GTAC 3 cut(s) 1547, 2876, 3311
AfiI CCNNNNNNNGG 6 cut(s) 374, 778, 1025, 1112, 1187, 1991
AflIII ACRYGT 2 cut(s) 2724, 3127
AhdI GACNNNNNGTC 3 cut(s) 703, 2698, 3187
AhlI ACTAGT 2 cut(s) 901, 1418
AjnI CCWGG 4 cut(s) 373, 772, 1642, 3201
AleI CACNNNNGTG 1 cut(s) 3273
Alw21I GWGCWC 2 cut(s) 168, 1329
AlwI GGATC 5 cut(s) 144, 1805, 2201, 2507, 2943
AlwNI CAGNNNCTG 1 cut(s) 263
Ama87I CYCGRG 2 cut(s) 1322, 3165
AoxI GGCC 5 cut(s) 1178, 2339, 3001, 3199, 3285
ApeKI GCWGC 9 cut(s) 557, 853, 1712, 1720, 1997, 2039, 2521, 2659, 2756
ApoI RAATTY 5 cut(s) 272, 941, 1431, 2769, 3012
ArsI GACNNNNNNTTYG 2 cut(s) 2300, 2332
AseI ATTAAT 1 cut(s) 2550
Asp718I GGTACC 1 cut(s) 1545
AspA2I CCTAGG 1 cut(s) 2516
AspLEI GCGC 1 cut(s) 54
AspS9I GGNCC 5 cut(s) 705, 1487, 2236, 3002, 3058
AsuC2I CCSGG 1 cut(s) 111
AsuHPI GGTGA 6 cut(s) 1127, 1202, 1214, 2173, 2704, 3287
AvaI CYCGRG 2 cut(s) 1322, 3165
AvaII GGWCC 4 cut(s) 705, 1487, 2236, 3058
AvrII CCTAGG 1 cut(s) 2516
BaeGI GKGCMC 2 cut(s) 325, 2451
BaeI ACNNNNGTAYC 1 cut(s) 3308
BanI GGYRCC 4 cut(s) 51, 322, 1545, 1639
BanII GRGCYC 2 cut(s) 772, 1329
BauI CACGAG 1 cut(s) 1185
BbrPI CACGTG 1 cut(s) 3128
BbsI GAAGAC 1 cut(s) 3183
Bbv12I GWGCWC 2 cut(s) 168, 1329
BbvI GCAGC 9 cut(s) 544, 840, 1707, 1724, 1984, 2051, 2508, 2671, 2743
BcgI CGANNNNNNTGC 1 cut(s) 30
BciT130I CCWGG 4 cut(s) 375, 774, 1644, 3203
BciVI GTATCC 1 cut(s) 886
BcnI CCSGG 1 cut(s) 111
BcuI ACTAGT 2 cut(s) 901, 1418
BfaI CTAG 7 cut(s) 140, 843, 866, 902, 1419, 2517, 3230
BfmI CTRYAG 3 cut(s) 2113, 2343, 2760
BfoI RGCGCY 1 cut(s) 55
BfuAI ACCTGC 1 cut(s) 1388
BfuI GTATCC 1 cut(s) 886
BlnI CCTAGG 1 cut(s) 2516
Bme1390I CCNGG 5 cut(s) 111, 375, 774, 1644, 3203
Bme18I GGWCC 4 cut(s) 705, 1487, 2236, 3058
BmeRI GACNNNNNGTC 3 cut(s) 703, 2698, 3187
BmeT110I CYCGRG 2 cut(s) 1322, 3165
BmgT120I GGNCC 5 cut(s) 705, 1487, 2236, 3002, 3058
BmrFI CCNGG 5 cut(s) 111, 375, 774, 1644, 3203
BmrI ACTGGG 2 cut(s) 243, 1225
BmsI GCATC 6 cut(s) 406, 544, 1876, 1930, 2154, 3019
BmuI ACTGGG 2 cut(s) 243, 1225
BpiI GAAGAC 1 cut(s) 3183
BplI GAGNNNNNCTC 4 cut(s) 745, 777, 1168, 1200
BpmI CTGGAG 3 cut(s) 396, 1718, 3102
BpuEI CTTGAG 4 cut(s) 1159, 2309, 3047, 3284
BpuMI CCSGG 1 cut(s) 111
BsaAI YACGTR 1 cut(s) 3128
BsaBI GATNNNNATC 3 cut(s) 135, 1227, 1746
BsaHI GRCGYC 1 cut(s) 52
BsaI GGTCTC 4 cut(s) 617, 671, 788, 1358
BsaJI CCNNGG 7 cut(s) 772, 1110, 1635, 2424, 2516, 2688, 3327
Bsc4I CCNNNNNNNGG 6 cut(s) 374, 778, 1025, 1112, 1187, 1991
Bse1I ACTGG 9 cut(s) 238, 757, 783, 1204, 1220, 2444, 2776, 2788, 2973
Bse3DI GCAATG 3 cut(s) 834, 1722, 1847
Bse8I GATNNNNATC 3 cut(s) 135, 1227, 1746
BseBI CCWGG 4 cut(s) 375, 774, 1644, 3203
BseDI CCNNGG 7 cut(s) 772, 1110, 1635, 2424, 2516, 2688, 3327
BseGI GGATG 8 cut(s) 133, 505, 1106, 1291, 1837, 1921, 2977, 3142
BseJI GATNNNNATC 3 cut(s) 135, 1227, 1746
BseLI CCNNNNNNNGG 6 cut(s) 374, 778, 1025, 1112, 1187, 1991
BseMI GCAATG 3 cut(s) 834, 1722, 1847
BseMII CTCAG 8 cut(s) 330, 813, 1083, 1164, 1279, 1293, 1956, 2944
BseNI ACTGG 9 cut(s) 238, 757, 783, 1204, 1220, 2444, 2776, 2788, 2973
BseRI GAGGAG 6 cut(s) 300, 518, 1013, 2312, 3099, 3117
BseSI GKGCMC 2 cut(s) 325, 2451
BseXI GCAGC 9 cut(s) 544, 840, 1707, 1724, 1984, 2051, 2508, 2671, 2743
BsgI GTGCAG 1 cut(s) 1610
Bsh1236I CGCG 3 cut(s) 45, 2367, 3100
BshFI GGCC 5 cut(s) 1180, 2341, 3003, 3201, 3287
BshNI GGYRCC 4 cut(s) 51, 322, 1545, 1639
BsiHKAI GWGCWC 2 cut(s) 168, 1329
BsiHKCI CYCGRG 2 cut(s) 1322, 3165
BsiSI CCGG 2 cut(s) 111, 2036
BslFI GGGAC 2 cut(s) 1500, 2249
BslI CCNNNNNNNGG 6 cut(s) 374, 778, 1025, 1112, 1187, 1991
BsmBI CGTCTC 1 cut(s) 1856
BsmFI GGGAC 2 cut(s) 1500, 2249
BsmI GAATGC 2 cut(s) 195, 1139
BsnI GGCC 5 cut(s) 1180, 2341, 3003, 3201, 3287
Bso31I GGTCTC 4 cut(s) 617, 671, 788, 1358
BsoBI CYCGRG 2 cut(s) 1322, 3165
Bsp1286I GDGCHC 5 cut(s) 168, 325, 772, 1329, 2451
Bsp19I CCATGG 1 cut(s) 2688
BspANI GGCC 5 cut(s) 1180, 2341, 3003, 3201, 3287
BspCNI CTCAG 8 cut(s) 331, 814, 1084, 1165, 1278, 1294, 1955, 2943
BspFNI CGCG 3 cut(s) 45, 2367, 3100
BspMI ACCTGC 1 cut(s) 1388
BspPI GGATC 5 cut(s) 144, 1805, 2201, 2507, 2943
BspT107I GGYRCC 4 cut(s) 51, 322, 1545, 1639
BspTNI GGTCTC 4 cut(s) 617, 671, 788, 1358
BsrDI GCAATG 3 cut(s) 834, 1722, 1847
BsrI ACTGG 9 cut(s) 238, 757, 783, 1204, 1220, 2444, 2776, 2788, 2973
BssECI CCNNGG 7 cut(s) 772, 1110, 1635, 2424, 2516, 2688, 3327
BssNAI GTATAC 1 cut(s) 2110
BssNI GRCGYC 1 cut(s) 52
BssSI CACGAG 1 cut(s) 1185
BssT1I CCWWGG 3 cut(s) 2424, 2516, 2688
Bst1107I GTATAC 1 cut(s) 2110
Bst2BI CACGAG 1 cut(s) 1185
Bst2UI CCWGG 4 cut(s) 375, 774, 1644, 3203
Bst6I CTCTTC 4 cut(s) 1104, 1152, 1505, 1854
BstACI GRCGYC 1 cut(s) 52
BstAPI GCANNNNNTGC 2 cut(s) 853, 1853
BstBAI YACGTR 1 cut(s) 3128
BstC8I GCNNGC 4 cut(s) 268, 1182, 1854, 2612
BstDSI CCRYGG 2 cut(s) 1110, 2688
BstF5I GGATG 8 cut(s) 133, 505, 1106, 1291, 1837, 1921, 2977, 3142
BstFNI CGCG 3 cut(s) 45, 2367, 3100
BstH2I RGCGCY 1 cut(s) 55
BstHHI GCGC 1 cut(s) 54
BstMWI GCNNNNNNNGC 9 cut(s) 31, 51, 566, 853, 979, 1679, 1853, 1943, 2254
BstNI CCWGG 4 cut(s) 375, 774, 1644, 3203
BstNSI RCATGY 3 cut(s) 648, 1412, 1445
BstSCI CCNGG 5 cut(s) 109, 373, 772, 1642, 3201
BstSFI CTRYAG 3 cut(s) 2113, 2343, 2760
BstSLI GKGCMC 2 cut(s) 325, 2451
BstUI CGCG 3 cut(s) 45, 2367, 3100
BstV1I GCAGC 9 cut(s) 544, 840, 1707, 1724, 1984, 2051, 2508, 2671, 2743
BstV2I GAAGAC 1 cut(s) 3183
BstX2I RGATCY 3 cut(s) 136, 1797, 2193
BstXI CCANNNNNNTGG 1 cut(s) 2783
BstYI RGATCY 3 cut(s) 136, 1797, 2193
BstZ17I GTATAC 1 cut(s) 2110
BsuI GTATCC 1 cut(s) 886
BsuRI GGCC 5 cut(s) 1180, 2341, 3003, 3201, 3287
BtgI CCRYGG 2 cut(s) 1110, 2688
BtgZI GCGATG 2 cut(s) 1688, 2659
BtsCI GGATG 8 cut(s) 133, 505, 1106, 1291, 1837, 1921, 2977, 3142
BtsI GCAGTG 1 cut(s) 2877
BtsIMutI CAGTG 7 cut(s) 157, 1213, 1273, 2451, 2781, 2877, 2966
BveI ACCTGC 1 cut(s) 1388
Cac8I GCNNGC 4 cut(s) 268, 1182, 1854, 2612
CaiI CAGNNNCTG 1 cut(s) 263
CfoI GCGC 1 cut(s) 54
Cfr13I GGNCC 5 cut(s) 705, 1487, 2236, 3002, 3058
CseI GACGC 1 cut(s) 1053
Csp6I GTAC 3 cut(s) 1546, 2875, 3310
CspCI CAANNNNNGTGG 4 cut(s) 1150, 1185, 2213, 2248
CviQI GTAC 3 cut(s) 1546, 2875, 3310
DinI GGCGCC 1 cut(s) 53
DriI GACNNNNNGTC 3 cut(s) 703, 2698, 3187
Eam1104I CTCTTC 4 cut(s) 1104, 1152, 1505, 1854
Eam1105I GACNNNNNGTC 3 cut(s) 703, 2698, 3187
EarI CTCTTC 4 cut(s) 1104, 1152, 1505, 1854
EciI GGCGGA 1 cut(s) 3251
Ecl136II GAGCTC 1 cut(s) 1327
Eco130I CCWWGG 3 cut(s) 2424, 2516, 2688
Eco147I AGGCCT 3 cut(s) 1180, 2341, 3287
Eco24I GRGCYC 2 cut(s) 772, 1329
Eco31I GGTCTC 4 cut(s) 617, 671, 788, 1358
Eco32I GATATC 1 cut(s) 819
Eco47I GGWCC 4 cut(s) 705, 1487, 2236, 3058
Eco53kI GAGCTC 1 cut(s) 1327
Eco57I CTGAAG 3 cut(s) 642, 1728, 2942
Eco72I CACGTG 1 cut(s) 3128
Eco88I CYCGRG 2 cut(s) 1322, 3165
EcoICRI GAGCTC 1 cut(s) 1327
EcoO109I RGGNCCY 2 cut(s) 2236, 3058
EcoRI GAATTC 1 cut(s) 272
EcoRII CCWGG 4 cut(s) 373, 772, 1642, 3201
EcoRV GATATC 1 cut(s) 819
EcoT14I CCWWGG 3 cut(s) 2424, 2516, 2688
EcoT22I ATGCAT 3 cut(s) 421, 1390, 2383
EcoT38I GRGCYC 2 cut(s) 772, 1329
EgeI GGCGCC 1 cut(s) 53
EheI GGCGCC 1 cut(s) 53
ErhI CCWWGG 3 cut(s) 2424, 2516, 2688
Esp3I CGTCTC 1 cut(s) 1856
FalI AAGNNNNNCTT 4 cut(s) 840, 872, 2783, 2815
FaqI GGGAC 2 cut(s) 1500, 2249
FauI CCCGC 3 cut(s) 70, 2360, 2672
FauNDI CATATG 1 cut(s) 628
FblI GTMKAC 2 cut(s) 2109, 2540
FokI GGATG 8 cut(s) 140, 512, 1093, 1298, 1824, 1908, 2984, 3149
FriOI GRGCYC 2 cut(s) 772, 1329
FspBI CTAG 7 cut(s) 140, 843, 866, 902, 1419, 2517, 3230
GlaI GCGC 1 cut(s) 53
GsuI CTGGAG 3 cut(s) 396, 1718, 3102
HaeII RGCGCY 1 cut(s) 55
HaeIII GGCC 5 cut(s) 1180, 2341, 3003, 3201, 3287
HapII CCGG 2 cut(s) 111, 2036
HgaI GACGC 1 cut(s) 1053
HhaI GCGC 1 cut(s) 54
Hin1I GRCGYC 1 cut(s) 52
Hin6I GCGC 1 cut(s) 52
HinP1I GCGC 1 cut(s) 52
HincII GTYRAC 4 cut(s) 1338, 2308, 2374, 2903
HindII GTYRAC 4 cut(s) 1338, 2308, 2374, 2903
HpaII CCGG 2 cut(s) 111, 2036
HphI GGTGA 6 cut(s) 1127, 1202, 1214, 2173, 2704, 3287
Hpy99I CGWCG 1 cut(s) 3182
HpyCH4IV ACGT 4 cut(s) 1239, 2078, 2726, 3127
HpyF10VI GCNNNNNNNGC 9 cut(s) 31, 51, 566, 853, 979, 1679, 1853, 1943, 2254
HpySE526I ACGT 4 cut(s) 1239, 2078, 2726, 3127
Hsp92I GRCGYC 1 cut(s) 52
HspAI GCGC 1 cut(s) 52
KasI GGCGCC 1 cut(s) 51
KflI GGGWCCC 1 cut(s) 2236
KpnI GGTACC 1 cut(s) 1549
LmnI GCTCC 3 cut(s) 22, 2131, 2641
Lsp1109I GCAGC 9 cut(s) 544, 840, 1707, 1724, 1984, 2051, 2508, 2671, 2743
LweI GCATC 6 cut(s) 406, 544, 1876, 1930, 2154, 3019
MaeI CTAG 7 cut(s) 140, 843, 866, 902, 1419, 2517, 3230
MaeII ACGT 4 cut(s) 1239, 2078, 2726, 3127
MaeIII GTNAC 5 cut(s) 118, 1190, 1500, 2944, 3266
MfeI CAATTG 1 cut(s) 169
MflI RGATCY 3 cut(s) 136, 1797, 2193
MhlI GDGCHC 5 cut(s) 168, 325, 772, 1329, 2451
Mly113I GGCGCC 1 cut(s) 52
MlyI GAGTC 5 cut(s) 398, 1046, 1103, 2557, 3157
MmeI TCCRAC 6 cut(s) 1006, 1263, 1758, 2458, 2591, 2604
Mph1103I ATGCAT 3 cut(s) 421, 1390, 2383
MslI CAYNNNNRTG 2 cut(s) 1898, 3273
MspA1I CMGCKG 4 cut(s) 34, 2042, 2257, 2614
MspI CCGG 2 cut(s) 111, 2036
MspR9I CCNGG 5 cut(s) 111, 375, 774, 1644, 3203
MunI CAATTG 1 cut(s) 169
Mva1269I GAATGC 2 cut(s) 195, 1139
MvaI CCWGG 4 cut(s) 375, 774, 1644, 3203
MvnI CGCG 3 cut(s) 45, 2367, 3100
MwoI GCNNNNNNNGC 9 cut(s) 31, 51, 566, 853, 979, 1679, 1853, 1943, 2254
NarI GGCGCC 1 cut(s) 52
NciI CCSGG 1 cut(s) 111
NcoI CCATGG 1 cut(s) 2688
NdeI CATATG 1 cut(s) 628
NmeAIII GCCGAG 2 cut(s) 1660, 3308
NmuCI GTSAC 4 cut(s) 1190, 1500, 2944, 3266
NsiI ATGCAT 3 cut(s) 421, 1390, 2383
NspI RCATGY 3 cut(s) 648, 1412, 1445
OliI CACNNNNGTG 1 cut(s) 3273
PaeR7I CTCGAG 2 cut(s) 1322, 3165
PaqCI CACCTGC 1 cut(s) 1388
PceI AGGCCT 3 cut(s) 1180, 2341, 3287
PcsI WCGNNNNNNNCGW 1 cut(s) 544
PctI GAATGC 2 cut(s) 195, 1139
PfeI GAWTC 8 cut(s) 289, 440, 1066, 1088, 2141, 3115, 3239, 3278
PflFI GACNNNGTC 1 cut(s) 146
PleI GAGTC 5 cut(s) 398, 1045, 1102, 2557, 3157
PluTI GGCGCC 1 cut(s) 55
PmaCI CACGTG 1 cut(s) 3128
PmlI CACGTG 1 cut(s) 3128
PpsI GAGTC 5 cut(s) 398, 1045, 1102, 2557, 3157
Ppu21I YACGTR 1 cut(s) 3128
PpuMI RGGWCCY 2 cut(s) 2236, 3058
PshBI ATTAAT 1 cut(s) 2550
PsiI TTATAA 1 cut(s) 101
Psp124BI GAGCTC 1 cut(s) 1329
Psp1406I AACGTT 1 cut(s) 1239
Psp5II RGGWCCY 2 cut(s) 2236, 3058
Psp6I CCWGG 4 cut(s) 373, 772, 1642, 3201
PspCI CACGTG 1 cut(s) 3128
PspGI CCWGG 4 cut(s) 373, 772, 1642, 3201
PspPI GGNCC 5 cut(s) 705, 1487, 2236, 3002, 3058
PspPPI RGGWCCY 2 cut(s) 2236, 3058
PspXI VCTCGAGB 1 cut(s) 1322
PsrI GAACNNNNNNTAC 2 cut(s) 3114, 3146
PstNI CAGNNNCTG 1 cut(s) 263
PsuI RGATCY 3 cut(s) 136, 1797, 2193
PsyI GACNNNGTC 1 cut(s) 146
PvuII CAGCTG 2 cut(s) 2042, 2614
RsaI GTAC 3 cut(s) 1547, 2876, 3311
RsaNI GTAC 3 cut(s) 1546, 2875, 3310
RseI CAYNNNNRTG 2 cut(s) 1898, 3273
SacI GAGCTC 1 cut(s) 1329
Sau96I GGNCC 5 cut(s) 705, 1487, 2236, 3002, 3058
SchI GAGTC 5 cut(s) 398, 1046, 1103, 2557, 3157
ScrFI CCNGG 5 cut(s) 111, 375, 774, 1644, 3203
SduI GDGCHC 5 cut(s) 168, 325, 772, 1329, 2451
SfaNI GCATC 6 cut(s) 406, 544, 1876, 1930, 2154, 3019
SfcI CTRYAG 3 cut(s) 2113, 2343, 2760
SfoI GGCGCC 1 cut(s) 53
Sfr274I CTCGAG 2 cut(s) 1322, 3165
SinI GGWCC 4 cut(s) 705, 1487, 2236, 3058
SlaI CTCGAG 2 cut(s) 1322, 3165
SmiMI CAYNNNNRTG 2 cut(s) 1898, 3273
SmlI CTYRAG 6 cut(s) 1138, 1322, 2324, 3062, 3165, 3299
SmoI CTYRAG 6 cut(s) 1138, 1322, 2324, 3062, 3165, 3299
SpeI ACTAGT 2 cut(s) 901, 1418
SseBI AGGCCT 3 cut(s) 1180, 2341, 3287
SspDI GGCGCC 1 cut(s) 51
SspI AATATT 1 cut(s) 991
SspMI CTAG 7 cut(s) 140, 843, 866, 902, 1419, 2517, 3230
SstI GAGCTC 1 cut(s) 1329
StuI AGGCCT 3 cut(s) 1180, 2341, 3287
StyD4I CCNGG 5 cut(s) 109, 373, 772, 1642, 3201
StyI CCWWGG 3 cut(s) 2424, 2516, 2688
TaiI ACGT 4 cut(s) 1242, 2081, 2729, 3130
TaqI TCGA 8 cut(s) 1150, 1323, 1744, 2295, 2767, 2858, 3166, 3177
TatI WGTACW 1 cut(s) 3309
TauI GCSGC 4 cut(s) 45, 352, 370, 2260
TfiI GAWTC 8 cut(s) 289, 440, 1066, 1088, 2141, 3115, 3239, 3278
TscAI CASTG 7 cut(s) 157, 1220, 1273, 2451, 2788, 2877, 2973
TseFI GTSAC 4 cut(s) 1190, 1500, 2944, 3266
TseI GCWGC 9 cut(s) 557, 853, 1712, 1720, 1997, 2039, 2521, 2659, 2756
Tsp45I GTSAC 4 cut(s) 1190, 1500, 2944, 3266
TspDTI ATGAA 9 cut(s) 263, 645, 756, 1361, 1848, 1888, 1946, 2585, 3064
TspGWI ACGGA 7 cut(s) 605, 953, 1376, 1391, 2027, 2906, 2972
TspRI CASTG 7 cut(s) 157, 1220, 1273, 2451, 2788, 2877, 2973
Tth111I GACNNNGTC 1 cut(s) 146
VpaK11BI GGWCC 4 cut(s) 705, 1487, 2236, 3058
VspI ATTAAT 1 cut(s) 2550
XapI RAATTY 5 cut(s) 272, 941, 1431, 2769, 3012
XbaI TCTAGA 1 cut(s) 139
XceI RCATGY 3 cut(s) 648, 1412, 1445
XcmI CCANNNNNNNNNTGG 3 cut(s) 230, 1220, 1590
XhoI CTCGAG 2 cut(s) 1322, 3165
XmaJI CCTAGG 1 cut(s) 2516
XmiI GTMKAC 2 cut(s) 2109, 2540
XspI CTAG 7 cut(s) 140, 843, 866, 902, 1419, 2517, 3230
Zsp2I ATGCAT 3 cut(s) 421, 1390, 2383
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.