Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0005738

Physical Location & Seq

Genomic Coordinates Forward (+)

33441635 .. 33456384

Gene Structure 14750 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1278500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3336 bp

ATGGAAGAGGAAAATGCGGTGGAGCTTTTACAGCGGTTTCGCCGCGACAGGCGAATACTTCTTGATTTTATACTTGCCGGTAGCTTGATAAAGAAGGTTATAATGCCTCCCGGTGCGGTTACGCTCGATGATGTGGATCTAGACCAAGTTAGTGTTGATTATGTGATCAATTGTGCTAAGAAAGGTGGAATGCTTGAGCTTTCGGAAGCTATTAGGGACTACCATGACCATACTGGTTTACCACAAATGAACAATACAGGTTCTGCTGGCGAGTTCTTTTTGGTTACGAATCCTGACTTTTCTGGTTCTCCTCCAAAAAGGGCACCGCCACCTGTTCCTGAATTTGTGCCGCCTCCTATTATCGTGCCGCCTCCAAGTGTCATATCATCTGTTCCTGATCTTGACTCATCTCCGGTTGCATTAAGTGTGTCAAAATCAGAATCTTTTAACTCTACACAAGTTCAAGAACTTACGGTAGATGATATTGAGGATTTTGAGGATGATGATATCGATGAGGCTGATAGTGTCCTCATTTCACGAAGGACACGAAATGATGCTGCTGATCTTGCTCTTGGATTGCCTCCTTTTAAGACAGCTATCACAGAAGATGGTCTCCGTGAAACTGCATATGAAGTCCTTTTGGCATGTGCTGGTGCTTCAGGGGGTCTCATTGTGCCTTCAAAAGAGAAAAAGAAAGACAAAAGGTCCAAGCTGATGAGGAAACTTGGACGAAGTAGAAATGAAAATGCTTTGAGTCAGTCTCAACGAGCCCCTGGATTGGTTGGGTTATTGGAGACTATGCGTGTTCAAATGGAGATATCTGAGGCAATGGACATCAGGACTAGACAAGGGCTGCTTAATGCCCTAGCAGGAAAAGTGGGAAAAAGAATGGATACCTTACTAGTTCCTCTGGAACTTTTATGCTGTATTTCACGAACAGAATTCTCTGACAAGAAGGCGTATATACGGTGGCAGAATAGGCAGTTGAATATATTGGAGGAGGGGCTTCTTAACTTCCCTGCTGTTGGATTTGGGGAGTCTGGACGCAAAGCGAGTGAGTTTAGGATTCTGTTAGCAAAGATTGAAGAATCAGAGTCACTTCCACCATCCACGGGTGAACTCCAACGAATGGAATGCTTGAGATCTCTTCGAGAGATTGCCACTCCACTTGCTGAGAGGCCTGCTCGTGGTGACTTAACTGGTGAAGTATGCCACTGGGCAGATGGTTATCACTTGAATGTTAGACTATATGAGAAACTGCTTCTCAGTGTCTTTGATATGTTGGACGAGGGAAAGCTGACTGAGGAAGTAGAAGAAATACTCGAGCTTGTGAAGTCGACGTGGCGTGTTTTAGGAATCACGGAGACCATTCATTGCACCTGCTATGCATGGGTCTTGTTCCGTCAGCATGTTATTACTAGCGATCAAGGAATTTTACAACATGCCATTGAACAGTTAAAGAAAATACCATTGAAGGAACAACGGGGACCACAGGAGAGGTCACACTTGAAGAGTTTGCATTGTAGAGTTGAAGGGGATCAGGGGCATCAAGATTTATCTTTCTTACAGTCATTCTTATTGCCAATTCAGAAGTGGGCTGATAAGCAATTAGGAGATTACCATCTGCACTTTGCTGAGGTGCCAGGTTTGATGGAGAATATAGTAGCAGTTGCGATGATTGCTCGGAGGCTGCTGTTGGAGGAACCCGAAGCAGCAATTCTTCAATCCACGTCCAACACAGATGAAGATCAGATAGAATTATATGTATCATCTTCTATTAAGAATGCATTTACAAGGATCTTACATTCTGTTGATAAATCAGAATTAAAGCATGAACATCCTTTGGCATTGCTTGCTGAAGAGACGAAGAAACTTTTGAAAAAAGATGCAACCATGTTCATGCCAATTTTATCCCAGAGGCATCCACAAGCAACTGCTGTCTCAGCCTCACTCCTTCATAGGATTTATGGCAACAAGTTGAAACCTTTTCTTCGGGCTGCTGAACATCTGACAGAAGATGTAGTATCTGTATTTCCAGCAGCTGACAGCCTTGAGCAATACATTATGGAACTTATTACGTCTGCTTGTGGAGAGGAAACTGCTGATGTATTCTGTAGGAAACTAGCTCCATACGAGATTGAATCTATATCTGGAACATTGGTGATGCGTTGGGTCAATTCGCAACTTGGAAGGATCTTAGGTTGGGTTGAACGGGCTATTCAGCAGGAGAGGTGGGACCCAATTTCACCTCAACAGCGGCATGGGAGTTCAATTGTTGAAGTATTTAGGATTGTGGAGGAGACTGTTGACCAATTTTTTGATCTCAAGGTTCCAATGAGGCCTACAGAATTGAGTGGTTTGTTTCGTGGAGTTGACAATGCGTTTCAAGTGTTTGCTAATCTCGTCATTGACAAGTTGGCTACTAAGGAGGATTTAATTCCACCAGTGCCCATTCTTACAAGATACAGGAAGGAAGCTGGAATAAAGGCTTTTGTAAAGAAGGAACTATTTGATCCTAGGCTGCCTGATGAGAGAAGGTCTACTGAAATTAGTTTTAGAACGACTCCAACCCTTTGTGTGCAGTTAAATACACTTTATTATGCAATCAGTCAGTTGAATAAGTTGGAAGATAGCATTTGGGAGCGCTGGACGAAGAAGAAGCCCCGCCAAAAACTTATCAAGAAATCCATAGATGAGAAGTCAAAAAGTTTCACCCAAAAGGACACGTTTGATGGCAGTAGAAAAGATATAAATGCTGCTATAGATCGAATTTGCGAGTTCACTGGAACTAAAATTATCTTCTGGGATTTGAGGGAACCGTTTATTGACAATTTATATAAACCAAGTGTTTCTCTTTCGAGGTTCGAAGCAGTGTATGAACCACTTGATACGGAACTTAGTCAACTATGTGCTATAATTGTGGAACCACTCAGGGATCGCATTGTGACAAGTCTCCTTCAGGCAACACTGGATGGTTTACTCCGCGTTCTATTAGATGGTGGCCCATCACGAATTTTCTCAGTGGGAGATGCAAAGCTATTAGAAGAAGACTTGGAGGTCCTCAAGGAGTTTTTCATCTCGGGAGGAGATGGCCTTCCGCGAGGAGTTGTTGAGAATCAGGTATCACGTGTTCGGGATGTAGTAAAGTTGCACAGCTACGAGACTCGAGAACTGATCGACGACTTGAGGTCTTCCAGTGGCCCGGAAGCTCGGGGTGGTAGAAGCAAACTAGGGGCTGATTCTAAGACCCTATTGAGAATATTATGTCATAGAGGTGATTCGGAGGCCTCTCAATTCCTCAAGAAACAGTACAAGATACCCAAGTCCGCGGCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005911 GO:0008150 GO:0009506 GO:0009987 GO:0010118 GO:0016020 GO:0030054 GO:0044424 GO:0044464 GO:0055044 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF810

Protein Analysis

1112

Amino Acids

125.13

Weight (kDa)

5.64

Isoelectric Point (pI)

48.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_PATROL1	PF25761	719 - 1109	6e-127	PATROL1-like, TPR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005738)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06970
fragaria_vesca	FvH4_7g03630 FvH4_7g03630 FvH4_7g03630 FvH4_7g03630 FvH4_7g03630 FvH4_7g03630 FvH4_7g03630
malus_domestica	MD02G1278500.v1.1 MD07G1046600.v1.1
prunus_persica	Prupe.2G042100_v2.0.a1 Prupe.2G042100_v2.0.a1 Prupe.2G042100_v2.0.a1 Prupe.2G042100_v2.0.a1 Prupe.2G042100_v2.0.a1
pyrus_communis	pycom02g23870 pycom07g03350
rosa_chinensis	RchiOBHm_Chr1g0326411
rosa_laevigata	RLG00000030074
rosa_multiflora	Rmu_sc0014190.1_g000004
rosa_roxburghii	Rroxscaffold_4G00323780
rosa_rugosa	Rorug01G0060300 Rorug01G0060300
rosa_samantha	Rh1AG076300 Rh1BG062300 Rh1CG074400 Rh1DG081700
rosa_wichuraiana	Rw1G006080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	101
AarI	CACCTGC	1 cut(s)	1388
AasI	GACNNNNNNGTC	1 cut(s)	3056
Acc36I	ACCTGC	1 cut(s)	1388
AccB1I	GGYRCC	2 cut(s)	322, 1639
AccB7I	CCANNNNNTGG	1 cut(s)	1129
AccI	GTMKAC	2 cut(s)	1337, 2540
AccII	CGCG	4 cut(s)	45, 2985, 3100, 3329
AclWI	GGATC	6 cut(s)	144, 1545, 1805, 2201, 2507, 2943
AcsI	RAATTY	5 cut(s)	341, 941, 1431, 2769, 3012
AcuI	CTGAAG	3 cut(s)	642, 1878, 2942
AcvI	CACGTG	1 cut(s)	3128
AfaI	GTAC	1 cut(s)	3311
AfeI	AGCGCT	1 cut(s)	2645
AfiI	CCNNNNNNNGG	5 cut(s)	778, 1025, 1112, 1129, 1187
AflIII	ACRYGT	2 cut(s)	2724, 3127
AhdI	GACNNNNNGTC	2 cut(s)	703, 3187
AhlI	ACTAGT	1 cut(s)	901
AjiI	CACGTC	2 cut(s)	1341, 1731
AjnI	CCWGG	2 cut(s)	772, 1642
AlwI	GGATC	6 cut(s)	144, 1545, 1805, 2201, 2507, 2943
AlwNI	CAGNNNCTG	2 cut(s)	263, 2042
Ama87I	CYCGRG	4 cut(s)	1322, 3079, 3165, 3210
Aor51HI	AGCGCT	1 cut(s)	2645
AoxI	GGCC	6 cut(s)	1178, 2339, 3001, 3091, 3199, 3285
ApeKI	GCWGC	8 cut(s)	557, 853, 1690, 1712, 1997, 2039, 2521, 2756
ApoI	RAATTY	5 cut(s)	341, 941, 1431, 2769, 3012
ArsI	GACNNNNNNTTYG	2 cut(s)	2300, 2332
AspA2I	CCTAGG	1 cut(s)	2516
AspLEI	GCGC	1 cut(s)	2646
AspS9I	GGNCC	6 cut(s)	705, 1487, 2236, 3002, 3058, 3200
AsuC2I	CCSGG	2 cut(s)	111, 3203
AsuHPI	GGTGA	7 cut(s)	1127, 1202, 1214, 2173, 2238, 2704, 3287
AsuII	TTCGAA	1 cut(s)	2865
AvaI	CYCGRG	4 cut(s)	1322, 3079, 3165, 3210
AvaII	GGWCC	4 cut(s)	705, 1487, 2236, 3058
AvrII	CCTAGG	1 cut(s)	2516
BaeGI	GKGCMC	2 cut(s)	325, 2451
BaeI	ACNNNNGTAYC	1 cut(s)	3308
BanI	GGYRCC	2 cut(s)	322, 1639
BanII	GRGCYC	1 cut(s)	772
BauI	CACGAG	1 cut(s)	1185
BbrPI	CACGTG	1 cut(s)	3128
BbsI	GAAGAC	2 cut(s)	3054, 3183
BbvCI	CCTCAGC	1 cut(s)	1635
BbvI	GCAGC	8 cut(s)	544, 840, 1677, 1724, 1984, 2051, 2508, 2743
BcgI	CGANNNNNNTGC	2 cut(s)	1116, 1150
BciT130I	CCWGG	2 cut(s)	774, 1644
BciVI	GTATCC	1 cut(s)	886
BclI	TGATCA	1 cut(s)	165
BcnI	CCSGG	2 cut(s)	111, 3203
BcuI	ACTAGT	1 cut(s)	901
BfaI	CTAG	8 cut(s)	140, 843, 866, 902, 1419, 2123, 2517, 3230
BfmI	CTRYAG	3 cut(s)	2113, 2343, 2760
BfoI	RGCGCY	1 cut(s)	2647
BfuAI	ACCTGC	1 cut(s)	1388
BfuI	GTATCC	1 cut(s)	886
BglII	AGATCT	1 cut(s)	1142
BlnI	CCTAGG	1 cut(s)	2516
Bme1390I	CCNGG	4 cut(s)	111, 774, 1644, 3203
Bme18I	GGWCC	4 cut(s)	705, 1487, 2236, 3058
BmeRI	GACNNNNNGTC	2 cut(s)	703, 3187
BmeT110I	CYCGRG	4 cut(s)	1322, 3079, 3165, 3210
BmgBI	CACGTC	2 cut(s)	1341, 1731
BmgT120I	GGNCC	6 cut(s)	705, 1487, 2236, 3002, 3058, 3200
BmiI	GGNNCC	9 cut(s)	324, 1488, 1641, 1704, 2237, 2238, 2331, 2817, 2925
BmrFI	CCNGG	4 cut(s)	111, 774, 1644, 3203
BmrI	ACTGGG	1 cut(s)	1225
BmsI	GCATC	6 cut(s)	544, 1555, 1876, 1930, 2154, 3019
BmuI	ACTGGG	1 cut(s)	1225
BpiI	GAAGAC	2 cut(s)	3054, 3183
BplI	GAGNNNNNCTC	4 cut(s)	745, 777, 1168, 1200
Bpu10I	CCTNAGC	1 cut(s)	1635
Bpu14I	TTCGAA	1 cut(s)	2865
BpuEI	CTTGAG	7 cut(s)	215, 1159, 2072, 2309, 3047, 3205, 3284
BpuMI	CCSGG	2 cut(s)	111, 3203
Bsa29I	ATCGAT	1 cut(s)	510
BsaAI	YACGTR	1 cut(s)	3128
BsaBI	GATNNNNATC	4 cut(s)	135, 1227, 1620, 1746
BsaI	GGTCTC	3 cut(s)	617, 671, 1358
BsaJI	CCNNGG	4 cut(s)	772, 1110, 2516, 3327
BsaWI	WCCGGW	1 cut(s)	412
Bsc4I	CCNNNNNNNGG	5 cut(s)	778, 1025, 1112, 1129, 1187
Bse118I	RCCGGY	1 cut(s)	77
Bse1I	ACTGG	7 cut(s)	238, 1204, 1220, 2444, 2788, 2973, 3195
Bse3DI	GCAATG	3 cut(s)	834, 1372, 1847
Bse8I	GATNNNNATC	4 cut(s)	135, 1227, 1620, 1746
BseBI	CCWGG	2 cut(s)	774, 1644
BseCI	ATCGAT	1 cut(s)	510
BseDI	CCNNGG	4 cut(s)	772, 1110, 2516, 3327
BseGI	GGATG	6 cut(s)	505, 1106, 1837, 1921, 2977, 3142
BseJI	GATNNNNATC	4 cut(s)	135, 1227, 1620, 1746
BseLI	CCNNNNNNNGG	5 cut(s)	778, 1025, 1112, 1129, 1187
BseMI	GCAATG	3 cut(s)	834, 1372, 1847
BseMII	CTCAG	8 cut(s)	813, 1164, 1279, 1293, 1626, 1956, 2944, 3033
BseNI	ACTGG	7 cut(s)	238, 1204, 1220, 2444, 2788, 2973, 3195
BseRI	GAGGAG	5 cut(s)	300, 1013, 2312, 3099, 3117
BseSI	GKGCMC	2 cut(s)	325, 2451
BseXI	GCAGC	8 cut(s)	544, 840, 1677, 1724, 1984, 2051, 2508, 2743
BsgI	GTGCAG	2 cut(s)	1610, 2600
Bsh1236I	CGCG	4 cut(s)	45, 2985, 3100, 3329
BshFI	GGCC	6 cut(s)	1180, 2341, 3003, 3093, 3201, 3287
BshNI	GGYRCC	2 cut(s)	322, 1639
BshVI	ATCGAT	1 cut(s)	510
BsiHKCI	CYCGRG	4 cut(s)	1322, 3079, 3165, 3210
BsiSI	CCGG	4 cut(s)	78, 111, 413, 3203
BslFI	GGGAC	3 cut(s)	230, 1500, 2249
BslI	CCNNNNNNNGG	5 cut(s)	778, 1025, 1112, 1129, 1187
BsmBI	CGTCTC	1 cut(s)	1856
BsmFI	GGGAC	3 cut(s)	230, 1500, 2249
BsmI	GAATGC	3 cut(s)	195, 1139, 1789
BsnI	GGCC	6 cut(s)	1180, 2341, 3003, 3093, 3201, 3287
Bso31I	GGTCTC	3 cut(s)	617, 671, 1358
BsoBI	CYCGRG	4 cut(s)	1322, 3079, 3165, 3210
Bsp119I	TTCGAA	1 cut(s)	2865
Bsp1286I	GDGCHC	3 cut(s)	325, 772, 2451
BspANI	GGCC	6 cut(s)	1180, 2341, 3003, 3093, 3201, 3287
BspCNI	CTCAG	8 cut(s)	814, 1165, 1278, 1294, 1627, 1955, 2943, 3032
BspDI	ATCGAT	1 cut(s)	510
BspFNI	CGCG	4 cut(s)	45, 2985, 3100, 3329
BspLI	GGNNCC	9 cut(s)	324, 1488, 1641, 1704, 2237, 2238, 2331, 2817, 2925
BspMI	ACCTGC	1 cut(s)	1388
BspPI	GGATC	6 cut(s)	144, 1545, 1805, 2201, 2507, 2943
BspT104I	TTCGAA	1 cut(s)	2865
BspT107I	GGYRCC	2 cut(s)	322, 1639
BspTNI	GGTCTC	3 cut(s)	617, 671, 1358
BsrDI	GCAATG	3 cut(s)	834, 1372, 1847
BsrFI	RCCGGY	1 cut(s)	77
BsrI	ACTGG	7 cut(s)	238, 1204, 1220, 2444, 2788, 2973, 3195
BssAI	RCCGGY	1 cut(s)	77
BssECI	CCNNGG	4 cut(s)	772, 1110, 2516, 3327
BssSI	CACGAG	1 cut(s)	1185
BssT1I	CCWWGG	1 cut(s)	2516
Bst2BI	CACGAG	1 cut(s)	1185
Bst2UI	CCWGG	2 cut(s)	774, 1644
Bst4CI	ACNGT	7 cut(s)	475, 969, 1455, 1569, 2305, 2820, 3309
Bst6I	CTCTTC	3 cut(s)	1152, 1505, 1854
BstAPI	GCANNNNNTGC	1 cut(s)	1853
BstBAI	YACGTR	1 cut(s)	3128
BstBI	TTCGAA	1 cut(s)	2865
BstC8I	GCNNGC	3 cut(s)	268, 1182, 1854
BstDSI	CCRYGG	2 cut(s)	1110, 3327
BstF5I	GGATG	6 cut(s)	505, 1106, 1837, 1921, 2977, 3142
BstFNI	CGCG	4 cut(s)	45, 2985, 3100, 3329
BstH2I	RGCGCY	1 cut(s)	2647
BstHHI	GCGC	1 cut(s)	2646
BstMWI	GCNNNNNNNGC	6 cut(s)	31, 566, 979, 1679, 1853, 1943
BstNI	CCWGG	2 cut(s)	774, 1644
BstNSI	RCATGY	3 cut(s)	648, 1412, 1445
BstSCI	CCNGG	4 cut(s)	109, 772, 1642, 3201
BstSFI	CTRYAG	3 cut(s)	2113, 2343, 2760
BstSLI	GKGCMC	2 cut(s)	325, 2451
BstUI	CGCG	4 cut(s)	45, 2985, 3100, 3329
BstV1I	GCAGC	8 cut(s)	544, 840, 1677, 1724, 1984, 2051, 2508, 2743
BstV2I	GAAGAC	2 cut(s)	3054, 3183
BstX2I	RGATCY	4 cut(s)	136, 1142, 1797, 2193
BstYI	RGATCY	4 cut(s)	136, 1142, 1797, 2193
Bsu15I	ATCGAT	1 cut(s)	510
BsuI	GTATCC	1 cut(s)	886
BsuRI	GGCC	6 cut(s)	1180, 2341, 3003, 3093, 3201, 3287
BsuTUI	ATCGAT	1 cut(s)	510
BtgI	CCRYGG	2 cut(s)	1110, 3327
BtgZI	GCGATG	1 cut(s)	1688
BtrI	CACGTC	2 cut(s)	1341, 1731
BtsCI	GGATG	6 cut(s)	505, 1106, 1837, 1921, 2977, 3142
BtsI	GCAGTG	1 cut(s)	2877
BtsIMutI	CAGTG	8 cut(s)	1213, 1273, 2451, 2781, 2877, 2966, 3027, 3202
BveI	ACCTGC	1 cut(s)	1388
Cac8I	GCNNGC	3 cut(s)	268, 1182, 1854
CaiI	CAGNNNCTG	2 cut(s)	263, 2042
CfoI	GCGC	1 cut(s)	2646
Cfr10I	RCCGGY	1 cut(s)	77
Cfr13I	GGNCC	6 cut(s)	705, 1487, 2236, 3002, 3058, 3200
Cfr42I	CCGCGG	1 cut(s)	3330
ClaI	ATCGAT	1 cut(s)	510
CseI	GACGC	1 cut(s)	1053
Csp6I	GTAC	1 cut(s)	3310
CspCI	CAANNNNNGTGG	2 cut(s)	1150, 1185
CviAII	CATG	9 cut(s)	224, 645, 1389, 1409, 1442, 1832, 1894, 1900, 2261
CviQI	GTAC	1 cut(s)	3310
DrdI	GACNNNNNNGTC	1 cut(s)	3056
DriI	GACNNNNNGTC	2 cut(s)	703, 3187
DseDI	GACNNNNNNGTC	1 cut(s)	3056
Eam1104I	CTCTTC	3 cut(s)	1152, 1505, 1854
Eam1105I	GACNNNNNGTC	2 cut(s)	703, 3187
EarI	CTCTTC	3 cut(s)	1152, 1505, 1854
Eco130I	CCWWGG	1 cut(s)	2516
Eco147I	AGGCCT	3 cut(s)	1180, 2341, 3287
Eco24I	GRGCYC	1 cut(s)	772
Eco31I	GGTCTC	3 cut(s)	617, 671, 1358
Eco32I	GATATC	2 cut(s)	508, 819
Eco47I	GGWCC	4 cut(s)	705, 1487, 2236, 3058
Eco47III	AGCGCT	1 cut(s)	2645
Eco57I	CTGAAG	3 cut(s)	642, 1878, 2942
Eco72I	CACGTG	1 cut(s)	3128
Eco88I	CYCGRG	4 cut(s)	1322, 3079, 3165, 3210
EcoO109I	RGGNCCY	2 cut(s)	2236, 3058
EcoRI	GAATTC	1 cut(s)	941
EcoRII	CCWGG	2 cut(s)	772, 1642
EcoRV	GATATC	2 cut(s)	508, 819
EcoT14I	CCWWGG	1 cut(s)	2516
EcoT22I	ATGCAT	2 cut(s)	1390, 1789
EcoT38I	GRGCYC	1 cut(s)	772
ErhI	CCWWGG	1 cut(s)	2516
Esp3I	CGTCTC	1 cut(s)	1856
FaeI	CATG	9 cut(s)	227, 648, 1392, 1412, 1445, 1835, 1897, 1903, 2264
FalI	AAGNNNNNCTT	2 cut(s)	840, 872
FaqI	GGGAC	3 cut(s)	230, 1500, 2249
FatI	CATG	9 cut(s)	223, 644, 1388, 1408, 1441, 1831, 1893, 1899, 2260
FauI	CCCGC	1 cut(s)	2672
FauNDI	CATATG	1 cut(s)	628
FbaI	TGATCA	1 cut(s)	165
FblI	GTMKAC	2 cut(s)	1337, 2540
FokI	GGATG	6 cut(s)	512, 1093, 1824, 1908, 2984, 3149
FriOI	GRGCYC	1 cut(s)	772
FspBI	CTAG	8 cut(s)	140, 843, 866, 902, 1419, 2123, 2517, 3230
GlaI	GCGC	1 cut(s)	2645
HaeII	RGCGCY	1 cut(s)	2647
HaeIII	GGCC	6 cut(s)	1180, 2341, 3003, 3093, 3201, 3287
HapII	CCGG	4 cut(s)	78, 111, 413, 3203
HgaI	GACGC	1 cut(s)	1053
HhaI	GCGC	1 cut(s)	2646
Hin1II	CATG	9 cut(s)	227, 648, 1392, 1412, 1445, 1835, 1897, 1903, 2264
Hin6I	GCGC	1 cut(s)	2644
HinP1I	GCGC	1 cut(s)	2644
HincII	GTYRAC	4 cut(s)	1338, 2308, 2374, 2903
HindII	GTYRAC	4 cut(s)	1338, 2308, 2374, 2903
HpaII	CCGG	4 cut(s)	78, 111, 413, 3203
HphI	GGTGA	7 cut(s)	1127, 1202, 1214, 2173, 2238, 2704, 3287
Hpy166II	GTNNAC	9 cut(s)	239, 1118, 1338, 2308, 2374, 2541, 2781, 2903, 2978
Hpy8I	GTNNAC	9 cut(s)	239, 1118, 1338, 2308, 2374, 2541, 2781, 2903, 2978
Hpy99I	CGWCG	2 cut(s)	1342, 3182
HpyCH4III	ACNGT	7 cut(s)	475, 969, 1455, 1569, 2305, 2820, 3309
HpyCH4IV	ACGT	5 cut(s)	1340, 1730, 2078, 2726, 3127
HpyF10VI	GCNNNNNNNGC	6 cut(s)	31, 566, 979, 1679, 1853, 1943
HpySE526I	ACGT	5 cut(s)	1340, 1730, 2078, 2726, 3127
Hsp92II	CATG	9 cut(s)	227, 648, 1392, 1412, 1445, 1835, 1897, 1903, 2264
HspAI	GCGC	1 cut(s)	2644
KflI	GGGWCCC	1 cut(s)	2236
Ksp22I	TGATCA	1 cut(s)	165
KspI	CCGCGG	1 cut(s)	3330
LmnI	GCTCC	3 cut(s)	22, 2131, 2641
Lsp1109I	GCAGC	8 cut(s)	544, 840, 1677, 1724, 1984, 2051, 2508, 2743
LweI	GCATC	6 cut(s)	544, 1555, 1876, 1930, 2154, 3019
MaeI	CTAG	8 cut(s)	140, 843, 866, 902, 1419, 2123, 2517, 3230
MaeII	ACGT	5 cut(s)	1340, 1730, 2078, 2726, 3127
MaeIII	GTNAC	6 cut(s)	118, 283, 1095, 1190, 1500, 2944
MfeI	CAATTG	2 cut(s)	169, 2271
MflI	RGATCY	4 cut(s)	136, 1142, 1797, 2193
MhlI	GDGCHC	3 cut(s)	325, 772, 2451
MlyI	GAGTC	6 cut(s)	398, 763, 1046, 1103, 2557, 3157
MmeI	TCCRAC	7 cut(s)	1006, 1147, 1263, 1677, 1758, 2591, 2604
Mph1103I	ATGCAT	2 cut(s)	1390, 1789
MslI	CAYNNNNRTG	3 cut(s)	1236, 1898, 3273
MspA1I	CMGCKG	4 cut(s)	34, 2042, 2257, 3329
MspI	CCGG	4 cut(s)	78, 111, 413, 3203
MspR9I	CCNGG	4 cut(s)	111, 774, 1644, 3203
MunI	CAATTG	2 cut(s)	169, 2271
Mva1269I	GAATGC	3 cut(s)	195, 1139, 1789
MvaI	CCWGG	2 cut(s)	774, 1644
MvnI	CGCG	4 cut(s)	45, 2985, 3100, 3329
MwoI	GCNNNNNNNGC	6 cut(s)	31, 566, 979, 1679, 1853, 1943
NciI	CCSGG	2 cut(s)	111, 3203
NdeI	CATATG	1 cut(s)	628
NlaIII	CATG	9 cut(s)	227, 648, 1392, 1412, 1445, 1835, 1897, 1903, 2264
NlaIV	GGNNCC	9 cut(s)	324, 1488, 1641, 1704, 2237, 2238, 2331, 2817, 2925
NmuCI	GTSAC	4 cut(s)	1095, 1190, 1500, 2944
NsiI	ATGCAT	2 cut(s)	1390, 1789
NspI	RCATGY	3 cut(s)	648, 1412, 1445
NspV	TTCGAA	1 cut(s)	2865
PaeR7I	CTCGAG	2 cut(s)	1322, 3165
PaqCI	CACCTGC	1 cut(s)	1388
PceI	AGGCCT	3 cut(s)	1180, 2341, 3287
PcsI	WCGNNNNNNNCGW	1 cut(s)	544
PctI	GAATGC	3 cut(s)	195, 1139, 1789
PfeI	GAWTC	9 cut(s)	289, 440, 1066, 1088, 1356, 2141, 3115, 3239, 3278
PflMI	CCANNNNNTGG	1 cut(s)	1129
PleI	GAGTC	6 cut(s)	398, 762, 1045, 1102, 2557, 3157
PmaCI	CACGTG	1 cut(s)	3128
PmlI	CACGTG	1 cut(s)	3128
PpsI	GAGTC	6 cut(s)	398, 762, 1045, 1102, 2557, 3157
Ppu21I	YACGTR	1 cut(s)	3128
PpuMI	RGGWCCY	2 cut(s)	2236, 3058
PsiI	TTATAA	1 cut(s)	101
Psp5II	RGGWCCY	2 cut(s)	2236, 3058
Psp6I	CCWGG	2 cut(s)	772, 1642
PspCI	CACGTG	1 cut(s)	3128
PspGI	CCWGG	2 cut(s)	772, 1642
PspN4I	GGNNCC	9 cut(s)	324, 1488, 1641, 1704, 2237, 2238, 2331, 2817, 2925
PspPI	GGNCC	6 cut(s)	705, 1487, 2236, 3002, 3058, 3200
PspPPI	RGGWCCY	2 cut(s)	2236, 3058
PspXI	VCTCGAGB	1 cut(s)	1322
PsrI	GAACNNNNNNTAC	2 cut(s)	3114, 3146
PstNI	CAGNNNCTG	2 cut(s)	263, 2042
PsuI	RGATCY	4 cut(s)	136, 1142, 1797, 2193
PvuII	CAGCTG	1 cut(s)	2042
RsaI	GTAC	1 cut(s)	3311
RsaNI	GTAC	1 cut(s)	3310
RseI	CAYNNNNRTG	3 cut(s)	1236, 1898, 3273
SacII	CCGCGG	1 cut(s)	3330
SalI	GTCGAC	1 cut(s)	1336
Sau96I	GGNCC	6 cut(s)	705, 1487, 2236, 3002, 3058, 3200
SchI	GAGTC	6 cut(s)	398, 763, 1046, 1103, 2557, 3157
ScrFI	CCNGG	4 cut(s)	111, 774, 1644, 3203
SduI	GDGCHC	3 cut(s)	325, 772, 2451
SfaNI	GCATC	6 cut(s)	544, 1555, 1876, 1930, 2154, 3019
SfcI	CTRYAG	3 cut(s)	2113, 2343, 2760
Sfr274I	CTCGAG	2 cut(s)	1322, 3165
Sfr303I	CCGCGG	1 cut(s)	3330
SfuI	TTCGAA	1 cut(s)	2865
SgrBI	CCGCGG	1 cut(s)	3330
SinI	GGWCC	4 cut(s)	705, 1487, 2236, 3058
SlaI	CTCGAG	2 cut(s)	1322, 3165
SmiMI	CAYNNNNRTG	3 cut(s)	1236, 1898, 3273
SmlI	CTYRAG	9 cut(s)	194, 1138, 1322, 2051, 2324, 3062, 3165, 3184, 3299
SmoI	CTYRAG	9 cut(s)	194, 1138, 1322, 2051, 2324, 3062, 3165, 3184, 3299
SpeI	ACTAGT	1 cut(s)	901
SseBI	AGGCCT	3 cut(s)	1180, 2341, 3287
SspI	AATATT	1 cut(s)	3261
SspMI	CTAG	8 cut(s)	140, 843, 866, 902, 1419, 2123, 2517, 3230
StuI	AGGCCT	3 cut(s)	1180, 2341, 3287
StyD4I	CCNGG	4 cut(s)	109, 772, 1642, 3201
StyI	CCWWGG	1 cut(s)	2516
TaaI	ACNGT	7 cut(s)	475, 969, 1455, 1569, 2305, 2820, 3309
TaiI	ACGT	5 cut(s)	1343, 1733, 2081, 2729, 3130
TatI	WGTACW	1 cut(s)	3309
TauI	GCSGC	5 cut(s)	45, 352, 370, 2260, 3332
TfiI	GAWTC	9 cut(s)	289, 440, 1066, 1088, 1356, 2141, 3115, 3239, 3278
TscAI	CASTG	8 cut(s)	1220, 1273, 2451, 2788, 2877, 2973, 3027, 3202
TseFI	GTSAC	4 cut(s)	1095, 1190, 1500, 2944
TseI	GCWGC	8 cut(s)	557, 853, 1690, 1712, 1997, 2039, 2521, 2756
Tsp45I	GTSAC	4 cut(s)	1095, 1190, 1500, 2944
TspGWI	ACGGA	4 cut(s)	605, 1376, 1391, 2906
TspRI	CASTG	8 cut(s)	1220, 1273, 2451, 2788, 2877, 2973, 3027, 3202
Van91I	CCANNNNNTGG	1 cut(s)	1129
VpaK11BI	GGWCC	4 cut(s)	705, 1487, 2236, 3058
XapI	RAATTY	5 cut(s)	341, 941, 1431, 2769, 3012
XbaI	TCTAGA	1 cut(s)	139
XceI	RCATGY	3 cut(s)	648, 1412, 1445
XcmI	CCANNNNNNNNNTGG	3 cut(s)	230, 1220, 1590
XhoI	CTCGAG	2 cut(s)	1322, 3165
XmaJI	CCTAGG	1 cut(s)	2516
XmiI	GTMKAC	2 cut(s)	1337, 2540
XspI	CTAG	8 cut(s)	140, 843, 866, 902, 1419, 2123, 2517, 3230
Zsp2I	ATGCAT	2 cut(s)	1390, 1789

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.