Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0012974

Physical Location & Seq

Genomic Coordinates Forward (+)

2284830 .. 2288855

Gene Structure 4026 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G07280.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3579 bp

ATGGCGTTTCTTACCGCATTGTTCCTGTTTCTCTTCTTCTCTTTTTCGAGTTCCGCCATTGTTGATCTTAGCTCGGAAACAACTTCTCTCATCTCCTTCAAGCGCTCACTAGAAAACCCATCTCTCCTTTCTTCATGGAACGTTTCGTCTTCCGCGTCTCACTGCGATTGGGTTGGCGTTACGTGTCTGCTTGGACGAGTCAACTCGCTCTCCTTACCGTCTTTGTCTCTGAGAGGCCAGATTCCGAAGGAAATTTCGAGTTTGAAGAACCTTAGAGAGCTTTGTCTTGCCGGAAATCAATTCTCCGGGAAGATTCCGCCTGAGATTTGGAATCTAAAACATCTCCAAACCCTTGACCTCTCAGGAAATTCTCTCACCGGACTTCTCCCGAGGCTACTCAGTGAGTTACCTCAGCTTCTCTACCTCGACCTTAGTGACAACCACTTCTCCGGTTCACTTCCTCCATCGTTCTTCATCAGCTTACCTGCACTGTCTTCTCTTGACGTCTCCAACAACTCTCTCTCCGGCGAAATCCCTCCTGAAATCGGGAAACTGAGTAACCTCTCCAATCTTTACATGGGACTCAACTCATTTTCCGGTCAAATTCCGTCGGAGATTGGTAACATCTCGTTGCTGAAGAACTTTGCTGCACCTTCTTGCTTCTTCAATGGACCGTTACCAAAGGAGATTTCGAAACTGAAACACTTAGCAAAGCTCGACCTTTCTTATAATCCACTCAAGTGTTCCATTCCCAAATCGTTTGGAGAGTTGCATAATCTGAGTATACTAAATCTTGTCTCCGCAGAGCTTATTGGATTGATCCCACCAGAGCTTGGTAATTGTAAAAGCCTCAAGTCACTGATGCTGTCTTTCAATTCTCTCTCTGGACCTTTGCCATTGGAGCTTTCAGAGATTCCTCTGTTGACGTTTTCTGCTGAAAGGAATCAGCTTTCGGGTTCATTGCCTTCATGGATGGGGAAATGGAAGGTACTGGACTCACTTCTGTTAGCTAACAATCGGTTTTCAGGTGAAATCCCTCATGAGATTGAGGATTGTCCAATGTTGAAACATCTCAGTCTAGCTAGCAACTTGTTAAGTGGTTCGATTCCTAGGGAGCTCTGTGGTTCAGGTTCGTTGGAGGCGATTGATCTCTCTGGGAATTTGCTTTCTGGAACAATTGAGGAGGTCTTTGATGGATGTTCCTCTCTTGGAGAGTTGTTACTTACTAATAATCAGATCAATGGCTCTATTCCTGAGGATCTTTGGAAGCTTCCATTGATGGCACTTGACTTGGATTCCAACAACTTCACAGGAGAAATCCCAAAGAGTCTCTGGAAATCAACGAACTTGATGGAGTTTACAGCTTCTTATAATCGTCTAGAAGGTTATTTGCCTGCAGAGATTGGTAATGCAGCTTCACTGAAGCGGTTGGTTCTCAGTGATAATCAGTTAACAGGTGAAATCCCAAGAGAGATTGGAAAACTCACATCTTTGTCTGTCTTGAATCTGAATGCAAACATGTTTCAAGGGAAGATACCAGTTGAGCTCGGTGATTGTACTTCTTTGACTACATTGGATCTAGGCAGCAACAATCTTCAAGGACAGATTCCAGACAAAATCACTGCTCTCGCTCAGCTTCAGTGCCTGGTTCTCTCTTACAACAATCTCTCCGGGTCAATTCCATCAAAACCCTCTGCTTATTTCCATCAGATTGAGATGCCTGATCTCAGCTTTCTTCAGCACCATGGGATATTTGATCTCTCCTACAATAGATTGTCTGGCCCTATACCAGAAGAACTTGGCGAGTGTTTGGTATTGGTAGAGATTTCACTGAGCAACAACCATCTCTCTGGAGAGATTCCAGCTTCACTCTCTCGTTTGACCAACCTCACAATCCTGGATCTATCTGGAAATGCACTGACTGGATCTATTCCAAAGGAGATGGGCAACTCTCTTAAGTTGCAGGGATTAAACTTGGCGAATAATCAGCTCAATGGCCATATTCCAGAAAGCTTTGGCTTGTTAGGTAGCTTGGTGAAGCTAAACTTGACTAAGAACAAGCTTGATGGACCGGTTCCTGCTTCTCTTGGGAACTTGAAAGAGCTTACACACATGGACTTGAGCTTTAACAACCTAAGTGGCGAGCTTTCATCAGAACTGTCTACAATGGAAAAACTTGTCGGCCTCTACATTGAGCAGAATAAGTTCACCGGGGAAATACCTTCAGAACTTGGTAATCTTACGCAGCTGGAGTACCTTGATGTTTCTGAGAACTTGTTATCTGGAGAGATACCAACAAAGATCTGTGGATTGCCCAATCTGGAGTTCTTGAATCTAGCCAAGAACAATCTGCGAGGAGAGGTGCCGAGTGATGGTGTTTGTCAGGATCCTTCCAAGGCATTGCTTTCAGGGAACAAAGAGTTGTGTGGCAGAGTGGTTGGATCAGATTGCAAGATCGAGGGAACTAAGTTGAGGAGTGCTTGGGGGATTGCAGGACTCATGCTTGGCTTTACGATCATCGTTTTTGTGTTTGTTTTCTCTCTGCGCAGATGGGCTATGACAAAGAGAGTGAAGCAAAGAGATGATCCAGAGCGAATGGAGGAAAGCAGATTGAAAGGGTTTGTTGATCAGAACCTGTATTTCTTAAGTGGAAGCAGATCAAGGGAGCCTTTAAGCATCAATATAGCAATGTTCGAGCAGCCGCTTCTGAAGGTGCGTTTAGGAGATATTGTCGAGGCTACAGATCATTTCTCTAAGAAGAACATTATAGGAGACGGTGGTTTTGGGACGGTTTACAAAGCTTGTTTACCAGGTGAGAAAACAGTAGCGGTGAAGAAGCTAAGTGAAGCCAAAACGCAGGGAAACCGAGAATTCATGGCAGAGATGGAGACTCTAGGGAAAGTGAAGCATCCGAATCTTGTGTCTTTGCTTGGATATTGCTCTTTCAGTGAAGAGAAGCTTCTGGTATATGAGTATATGGTAAATGGAAGCTTAGATCACTGGTTAAGGAACCAAACTGGGATGCTAGAGGTTCTGGACTGGTCAAAACGCCTCAAAATCGCAGTTGGAGCTGCAAGAGGTCTAGCTTTCCTACATCACGGTTTCATCCCTCACATTATACACAGGGACATCAAAGCGAGCAACATTCTGTTAGATGGTGATTTTGAACCAAAGGTGGCGGATTTTGGGCTAGCAAGACTAATTAGTGCCTGTGAATCCCATGTTAGTACAGTCATAGCAGGGACTTTCGGGTATATCCCACCGGAGTATGGTCAGAGTGCCCGAGCCACAACCAAAGGAGATGTCTATAGCTTTGGCGTGATACTATTGGAGCTTGTCACAGGGAAAGAGCCAACCGGTCCAGACTTTAAGGAGAGTGAAGGAGGGAACTTGGTTGGTTGGGCGATTCAGAAGATCAACCAAGGGAAAGCTGTGGATGTTATTGATCCACTGCTCGTATCTGTGGCTTTGAAGAACTCTCAGCTTCGTCTGCTTCAGATAGCTATGCTTTGTCTTGCTGAAACGCCAGCTAAGCGCCCTAACATGCTTGATGTGTTGAAGGCTCTTAAGGAGATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001708 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004888 GO:0005575 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007049 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009555 GO:0009556 GO:0009653 GO:0009791 GO:0009908 GO:0009987 GO:0010234 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019953 GO:0022402 GO:0022414 GO:0023052 GO:0030154 GO:0032501 GO:0032502 GO:0034293 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0043934 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044703 GO:0045165 GO:0046777 GO:0048229 GO:0048236 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048444 GO:0048448 GO:0048449 GO:0048455 GO:0048466 GO:0048608 GO:0048646 GO:0048653 GO:0048654 GO:0048655 GO:0048656 GO:0048657 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051321 GO:0051704 GO:0051716 GO:0060089 GO:0061458 GO:0065007 GO:0071704 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:0140096 GO:1901564 GO:1903046 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

1192

Amino Acids

129.8

Weight (kDa)

5.61

Isoelectric Point (pI)

33.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	24 - 62	8.7e-10	Leucine rich repeat N-terminal domain
LRR_14	PF23598	82 - 145	3.4e-07	Leucine-rich repeat region
LRR_4	PF12799	89 - 128	3.1e-07	Leucine Rich repeats (2 copies)
LRR_8	PF13855	90 - 149	1.3e-08	Leucine rich repeat
LRR_8	PF13855	331 - 389	1.3e-06	Leucine rich repeat
LRR_8	PF13855	378 - 436	4.8e-06	Leucine rich repeat
LRR_14	PF23598	622 - 732	5.4e-07	Leucine-rich repeat region
LRR_8	PF13855	726 - 784	1.8e-06	Leucine rich repeat
Pkinase	PF00069	917 - 1187	1.2e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	920 - 1188	6.4e-47	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0012974)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07280
fragaria_vesca	FvH4_7g29180
malus_domestica	MD01G1198500.v1.1 MD07G1266400.v1.1
prunus_persica	Prupe.2G292000_v2.0.a1
pyrus_communis	pycom01g20870 pycom07g24420
rosa_chinensis	RchiOBHm_Chr1g0376951
rosa_laevigata	RLG00000026557
rosa_multiflora	Rmu_sc0026264.1_g000001 Rmu_ssc0000155.1_g000035
rosa_roxburghii	Rroxscaffold_4G00281610
rosa_rugosa	Rorug01G0399800
rosa_samantha	Rh1AG417000 Rh1BG376400 Rh1CG390200 Rh1DG407100
rosa_wichuraiana	Rw1G036600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	729, 1371
AatII	GACGTC	1 cut(s)	507
Acc16I	TGCGCA	1 cut(s)	2546
Acc36I	ACCTGC	1 cut(s)	493
AccB1I	GGYRCC	1 cut(s)	2362
AccB7I	CCANNNNNTGG	1 cut(s)	833
AccI	GTMKAC	2 cut(s)	784, 2162
AccII	CGCG	1 cut(s)	155
AciI	CCGC	9 cut(s)	15, 54, 153, 317, 801, 1426, 2702, 2828, 3179
AclI	AACGTT	1 cut(s)	141
AcoI	YGGCCR	1 cut(s)	1996
AcsI	RAATTY	5 cut(s)	252, 367, 603, 1159, 2870
AcuI	CTGAAG	7 cut(s)	656, 1442, 1622, 1721, 2208, 2729, 3479
AcyI	GRCGYC	1 cut(s)	504
AfaI	GTAC	4 cut(s)	990, 1558, 2255, 3229
AfeI	AGCGCT	1 cut(s)	104
AfiI	CCNNNNNNNGG	4 cut(s)	545, 833, 2372, 3269
AflII	CTTAAG	3 cut(s)	1955, 2644, 3566
AflIII	ACRYGT	2 cut(s)	182, 1518
AgeI	ACCGGT	2 cut(s)	2071, 3356
AjnI	CCWGG	3 cut(s)	1644, 1896, 2809
AjuI	GAANNNNNNNTTGG	4 cut(s)	673, 705, 2309, 2341
AleI	CACNNNNGTG	1 cut(s)	739
Alw21I	GWGCWC	2 cut(s)	1119, 1548
Alw26I	GTCTC	7 cut(s)	162, 231, 511, 802, 1334, 2766, 2882
AlwNI	CAGNNNCTG	2 cut(s)	1645, 2635
Ama87I	CYCGRG	2 cut(s)	388, 3282
Aor51HI	AGCGCT	1 cut(s)	104
AoxI	GGCC	4 cut(s)	235, 1780, 1996, 2182
ApeKI	GCWGC	6 cut(s)	647, 1412, 1584, 2245, 2698, 3071
ApoI	RAATTY	5 cut(s)	252, 367, 603, 1159, 2870
ArsI	GACNNNNNNTTYG	6 cut(s)	2765, 2797, 2906, 2938, 3288, 3320
AsiGI	ACCGGT	2 cut(s)	2071, 3356
Asp700I	GAANNNNTTC	1 cut(s)	2204
AspA2I	CCTAGG	1 cut(s)	1109
AspLEI	GCGC	3 cut(s)	105, 2547, 3537
AspS9I	GGNCC	5 cut(s)	671, 887, 1781, 2069, 3359
AsuC2I	CCSGG	3 cut(s)	307, 1672, 2212
AsuHPI	GGTGA	9 cut(s)	367, 1040, 1469, 1562, 2047, 2200, 2825, 2842, 3170
AsuII	TTCGAA	1 cut(s)	692
AsuNHI	GCTAGC	2 cut(s)	1082, 3190
AvaI	CYCGRG	2 cut(s)	388, 3282
AvaII	GGWCC	4 cut(s)	671, 887, 2069, 3359
AvrII	CCTAGG	1 cut(s)	1109
AxyI	CCTNAGG	1 cut(s)	1254
BaeGI	GKGCMC	1 cut(s)	3283
BalI	TGGCCA	1 cut(s)	1998
BamHI	GGATCC	1 cut(s)	2386
BanI	GGYRCC	1 cut(s)	2362
BanII	GRGCYC	2 cut(s)	1119, 1548
BarI	GAAGNNNNNNTAC	2 cut(s)	1399, 1431
BbsI	GAAGAC	2 cut(s)	141, 486
Bbv12I	GWGCWC	2 cut(s)	1119, 1548
BbvCI	CCTCAGC	1 cut(s)	411
BbvI	GCAGC	6 cut(s)	634, 1424, 1596, 2257, 2710, 3058
BciT130I	CCWGG	3 cut(s)	1646, 1898, 2811
BclI	TGATCA	1 cut(s)	2626
BcnI	CCSGG	3 cut(s)	307, 1672, 2212
BcoDI	GTCTC	7 cut(s)	162, 231, 511, 802, 1334, 2766, 2882
BfmI	CTRYAG	3 cut(s)	1395, 2739, 3307
BfoI	RGCGCY	2 cut(s)	106, 3538
BfrI	CTTAAG	3 cut(s)	1955, 2644, 3566
BfuAI	ACCTGC	1 cut(s)	493
BglII	AGATCT	1 cut(s)	2301
BisI	GCNGC	7 cut(s)	648, 1413, 1585, 2246, 2699, 2702, 3072
BlnI	CCTAGG	1 cut(s)	1109
BlpI	GCTNAGC	2 cut(s)	1632, 3531
BlsI	GCNGC	7 cut(s)	649, 1414, 1586, 2247, 2700, 2703, 3073
Bme1390I	CCNGG	6 cut(s)	307, 1646, 1672, 1898, 2212, 2811
Bme18I	GGWCC	4 cut(s)	671, 887, 2069, 3359
BmeT110I	CYCGRG	2 cut(s)	388, 3282
BmgT120I	GGNCC	5 cut(s)	671, 887, 1781, 2069, 3359
BmiI	GGNNCC	5 cut(s)	2076, 2364, 2388, 2667, 3011
BmrFI	CCNGG	6 cut(s)	307, 1646, 1672, 1898, 2212, 2811
BmrI	ACTGGG	1 cut(s)	3027
BmsI	GCATC	5 cut(s)	852, 1707, 2685, 2917, 3012
BmtI	GCTAGC	2 cut(s)	1086, 3194
BmuI	ACTGGG	1 cut(s)	3027
BpiI	GAAGAC	2 cut(s)	141, 486
BpmI	CTGGAG	4 cut(s)	1872, 2270, 2304, 2342
Bpu10I	CCTNAGC	1 cut(s)	411
Bpu1102I	GCTNAGC	2 cut(s)	1632, 3531
Bpu14I	TTCGAA	1 cut(s)	692
BpuEI	CTTGAG	3 cut(s)	722, 836, 2140
BpuMI	CCSGG	3 cut(s)	307, 1672, 2212
BsaAI	YACGTR	1 cut(s)	183
BsaHI	GRCGYC	1 cut(s)	504
BsaJI	CCNNGG	6 cut(s)	389, 1109, 1744, 2211, 2394, 3421
BsaWI	WCCGGW	6 cut(s)	377, 449, 596, 2071, 3262, 3356
Bsc4I	CCNNNNNNNGG	4 cut(s)	545, 833, 2372, 3269
Bse118I	RCCGGY	2 cut(s)	2071, 3356
Bse1I	ACTGG	6 cut(s)	996, 1538, 1927, 3005, 3022, 3044
Bse21I	CCTNAGG	1 cut(s)	1254
Bse3DI	GCAATG	3 cut(s)	959, 2399, 2694
BseBI	CCWGG	3 cut(s)	1646, 1898, 2811
BseDI	CCNNGG	6 cut(s)	389, 1109, 1744, 2211, 2394, 3421
BseGI	GGATG	6 cut(s)	978, 1202, 2908, 3027, 3105, 3442
BseLI	CCNNNNNNNGG	4 cut(s)	545, 833, 2372, 3269
BseMI	GCAATG	3 cut(s)	959, 2399, 2694
BseNI	ACTGG	6 cut(s)	996, 1538, 1927, 3005, 3022, 3044
BseRI	GAGGAG	3 cut(s)	1196, 2370, 2488
BseSI	GKGCMC	1 cut(s)	3283
BseXI	GCAGC	6 cut(s)	634, 1424, 1596, 2257, 2710, 3058
BsgI	GTGCAG	2 cut(s)	471, 633
Bsh1236I	CGCG	1 cut(s)	155
BshFI	GGCC	4 cut(s)	237, 1782, 1998, 2184
BshNI	GGYRCC	1 cut(s)	2362
BshTI	ACCGGT	2 cut(s)	2071, 3356
BsiHKAI	GWGCWC	2 cut(s)	1119, 1548
BsiHKCI	CYCGRG	2 cut(s)	388, 3282
BslFI	GGGAC	4 cut(s)	594, 2800, 3140, 3256
BslI	CCNNNNNNNGG	4 cut(s)	545, 833, 2372, 3269
BsmAI	GTCTC	7 cut(s)	162, 231, 511, 802, 1334, 2766, 2882
BsmBI	CGTCTC	3 cut(s)	162, 511, 2766
BsmFI	GGGAC	4 cut(s)	594, 2800, 3140, 3256
BsmI	GAATGC	1 cut(s)	1516
BsnI	GGCC	4 cut(s)	237, 1782, 1998, 2184
BsoBI	CYCGRG	2 cut(s)	388, 3282
Bsp119I	TTCGAA	1 cut(s)	692
Bsp1286I	GDGCHC	3 cut(s)	1119, 1548, 3283
Bsp1720I	GCTNAGC	2 cut(s)	1632, 3531
Bsp19I	CCATGG	1 cut(s)	1744
BspACI	CCGC	9 cut(s)	15, 54, 153, 317, 801, 1426, 2702, 2828, 3179
BspANI	GGCC	4 cut(s)	237, 1782, 1998, 2184
BspFNI	CGCG	1 cut(s)	155
BspHI	TCATGA	1 cut(s)	1039
BspLI	GGNNCC	5 cut(s)	2076, 2364, 2388, 2667, 3011
BspMAI	CTGCAG	1 cut(s)	1399
BspMI	ACCTGC	1 cut(s)	493
BspOI	GCTAGC	2 cut(s)	1086, 3194
BspT104I	TTCGAA	1 cut(s)	692
BspT107I	GGYRCC	1 cut(s)	2362
BspTI	CTTAAG	3 cut(s)	1955, 2644, 3566
BsrDI	GCAATG	3 cut(s)	959, 2399, 2694
BsrFI	RCCGGY	2 cut(s)	2071, 3356
BsrI	ACTGG	6 cut(s)	996, 1538, 1927, 3005, 3022, 3044
BssAI	RCCGGY	2 cut(s)	2071, 3356
BssECI	CCNNGG	6 cut(s)	389, 1109, 1744, 2211, 2394, 3421
BssNAI	GTATAC	1 cut(s)	785
BssNI	GRCGYC	1 cut(s)	504
BssT1I	CCWWGG	4 cut(s)	1109, 1744, 2394, 3421
Bst1107I	GTATAC	1 cut(s)	785
Bst2UI	CCWGG	3 cut(s)	1646, 1898, 2811
Bst4CI	ACNGT	9 cut(s)	219, 492, 675, 2160, 2777, 2791, 2824, 3101, 3232
Bst6I	CTCTTC	2 cut(s)	38, 2946
BstACI	GRCGYC	1 cut(s)	504
BstAFI	CTTAAG	3 cut(s)	1955, 2644, 3566
BstBAI	YACGTR	1 cut(s)	183
BstBI	TTCGAA	1 cut(s)	692
BstC8I	GCNNGC	6 cut(s)	1084, 1395, 2144, 3139, 3192, 3528
BstDSI	CCRYGG	1 cut(s)	1744
BstF5I	GGATG	6 cut(s)	978, 1202, 2908, 3027, 3105, 3442
BstFNI	CGCG	1 cut(s)	155
BstH2I	RGCGCY	2 cut(s)	106, 3538
BstHHI	GCGC	3 cut(s)	105, 2547, 3537
BstMAI	GTCTC	7 cut(s)	162, 231, 511, 802, 1334, 2766, 2882
BstMWI	GCNNNNNNNGC	4 cut(s)	901, 3068, 3490, 3532
BstNI	CCWGG	3 cut(s)	1646, 1898, 2811
BstNSI	RCATGY	2 cut(s)	1522, 3547
BstSCI	CCNGG	6 cut(s)	305, 1644, 1670, 1896, 2210, 2809
BstSFI	CTRYAG	3 cut(s)	1395, 2739, 3307
BstSLI	GKGCMC	1 cut(s)	3283
BstUI	CGCG	1 cut(s)	155
BstV1I	GCAGC	6 cut(s)	634, 1424, 1596, 2257, 2710, 3058
BstV2I	GAAGAC	2 cut(s)	141, 486
BstX2I	RGATCY	6 cut(s)	1258, 1576, 1900, 1925, 2301, 2386
BstXI	CCANNNNNNTGG	1 cut(s)	1850
BstYI	RGATCY	6 cut(s)	1258, 1576, 1900, 1925, 2301, 2386
BstZ17I	GTATAC	1 cut(s)	785
Bsu36I	CCTNAGG	1 cut(s)	1254
BsuRI	GGCC	4 cut(s)	237, 1782, 1998, 2184
BtgI	CCRYGG	1 cut(s)	1744
BtsCI	GGATG	6 cut(s)	978, 1202, 2908, 3027, 3105, 3442
BtsI	GCAGTG	3 cut(s)	160, 1620, 3449
BveI	ACCTGC	1 cut(s)	493
Cac8I	GCNNGC	6 cut(s)	1084, 1395, 2144, 3139, 3192, 3528
CaiI	CAGNNNCTG	2 cut(s)	1645, 2635
CciI	TCATGA	1 cut(s)	1039
CfoI	GCGC	3 cut(s)	105, 2547, 3537
Cfr10I	RCCGGY	2 cut(s)	2071, 3356
Cfr13I	GGNCC	5 cut(s)	671, 887, 1781, 2069, 3359
CseI	GACGC	1 cut(s)	144
CsiI	ACCWGGT	1 cut(s)	2809
Csp6I	GTAC	4 cut(s)	989, 1557, 2254, 3228
CspAI	ACCGGT	2 cut(s)	2071, 3356
CspCI	CAANNNNNGTGG	2 cut(s)	2119, 2154
CviQI	GTAC	4 cut(s)	989, 1557, 2254, 3228
EaeI	YGGCCR	1 cut(s)	1996
Eam1104I	CTCTTC	2 cut(s)	38, 2946
EarI	CTCTTC	2 cut(s)	38, 2946
EciI	GGCGGA	3 cut(s)	43, 306, 3194
Ecl136II	GAGCTC	2 cut(s)	1117, 1546
Eco130I	CCWWGG	4 cut(s)	1109, 1744, 2394, 3421
Eco24I	GRGCYC	2 cut(s)	1119, 1548
Eco47I	GGWCC	4 cut(s)	671, 887, 2069, 3359
Eco47III	AGCGCT	1 cut(s)	104
Eco53kI	GAGCTC	2 cut(s)	1117, 1546
Eco57I	CTGAAG	7 cut(s)	656, 1442, 1622, 1721, 2208, 2729, 3479
Eco81I	CCTNAGG	1 cut(s)	1254
Eco88I	CYCGRG	2 cut(s)	388, 3282
EcoICRI	GAGCTC	2 cut(s)	1117, 1546
EcoRI	GAATTC	1 cut(s)	2870
EcoRII	CCWGG	3 cut(s)	1644, 1896, 2809
EcoT14I	CCWWGG	4 cut(s)	1109, 1744, 2394, 3421
EcoT38I	GRGCYC	2 cut(s)	1119, 1548
ErhI	CCWWGG	4 cut(s)	1109, 1744, 2394, 3421
Esp3I	CGTCTC	3 cut(s)	162, 511, 2766
FalI	AAGNNNNNCTT	6 cut(s)	2030, 2062, 2653, 2685, 2943, 2975
FaqI	GGGAC	4 cut(s)	594, 2800, 3140, 3256
FbaI	TGATCA	1 cut(s)	2626
FblI	GTMKAC	2 cut(s)	784, 2162
Fnu4HI	GCNGC	7 cut(s)	648, 1413, 1585, 2246, 2699, 2702, 3072
FokI	GGATG	6 cut(s)	985, 1209, 2895, 3034, 3092, 3449
FriOI	GRGCYC	2 cut(s)	1119, 1548
Fsp4HI	GCNGC	7 cut(s)	648, 1413, 1585, 2246, 2699, 2702, 3072
FspI	TGCGCA	1 cut(s)	2546
GlaI	GCGC	3 cut(s)	104, 2546, 3536
GluI	GCNGC	7 cut(s)	648, 1413, 1585, 2246, 2699, 2702, 3072
GsuI	CTGGAG	4 cut(s)	1872, 2270, 2304, 2342
HaeII	RGCGCY	2 cut(s)	106, 3538
HaeIII	GGCC	4 cut(s)	237, 1782, 1998, 2184
HgaI	GACGC	1 cut(s)	144
HhaI	GCGC	3 cut(s)	105, 2547, 3537
Hin1I	GRCGYC	1 cut(s)	504
Hin6I	GCGC	3 cut(s)	103, 2545, 3535
HinP1I	GCGC	3 cut(s)	103, 2545, 3535
HincII	GTYRAC	3 cut(s)	202, 924, 1452
HindII	GTYRAC	3 cut(s)	202, 924, 1452
HindIII	AAGCTT	6 cut(s)	1268, 2011, 2060, 2799, 2957, 2989
HpaI	GTTAAC	1 cut(s)	1452
HphI	GGTGA	9 cut(s)	367, 1040, 1469, 1562, 2047, 2200, 2825, 2842, 3170
Hpy99I	CGWCG	1 cut(s)	613
HpyCH4III	ACNGT	9 cut(s)	219, 492, 675, 2160, 2777, 2791, 2824, 3101, 3232
HpyCH4IV	ACGT	4 cut(s)	141, 182, 504, 926
HpyF10VI	GCNNNNNNNGC	4 cut(s)	901, 3068, 3490, 3532
HpySE526I	ACGT	4 cut(s)	141, 182, 504, 926
Hsp92I	GRCGYC	1 cut(s)	504
HspAI	GCGC	3 cut(s)	103, 2545, 3535
Ksp22I	TGATCA	1 cut(s)	2626
KspAI	GTTAAC	1 cut(s)	1452
LmnI	GCTCC	5 cut(s)	901, 1114, 2665, 3068, 3331
Lsp1109I	GCAGC	6 cut(s)	634, 1424, 1596, 2257, 2710, 3058
LweI	GCATC	5 cut(s)	852, 1707, 2685, 2917, 3012
MabI	ACCWGGT	1 cut(s)	2809
MaeII	ACGT	4 cut(s)	141, 182, 504, 926
MaeIII	GTNAC	9 cut(s)	178, 405, 434, 557, 620, 675, 855, 1218, 3337
MfeI	CAATTG	1 cut(s)	1176
MflI	RGATCY	6 cut(s)	1258, 1576, 1900, 1925, 2301, 2386
MhlI	GDGCHC	3 cut(s)	1119, 1548, 3283
MlsI	TGGCCA	1 cut(s)	1998
MluNI	TGGCCA	1 cut(s)	1998
MlyI	GAGTC	6 cut(s)	207, 576, 989, 1336, 2490, 2884
MmeI	TCCRAC	6 cut(s)	534, 591, 1116, 1323, 2419, 3046
Mox20I	TGGCCA	1 cut(s)	1998
MroXI	GAANNNNTTC	1 cut(s)	2204
MscI	TGGCCA	1 cut(s)	1998
MslI	CAYNNNNRTG	1 cut(s)	739
Msp20I	TGGCCA	1 cut(s)	1998
MspA1I	CMGCKG	1 cut(s)	2248
MspCI	CTTAAG	3 cut(s)	1955, 2644, 3566
MspR9I	CCNGG	6 cut(s)	307, 1646, 1672, 1898, 2212, 2811
MunI	CAATTG	1 cut(s)	1176
Mva1269I	GAATGC	1 cut(s)	1516
MvaI	CCWGG	3 cut(s)	1646, 1898, 2811
MvnI	CGCG	1 cut(s)	155
MwoI	GCNNNNNNNGC	4 cut(s)	901, 3068, 3490, 3532
NciI	CCSGG	3 cut(s)	307, 1672, 2212
NcoI	CCATGG	1 cut(s)	1744
NheI	GCTAGC	2 cut(s)	1082, 3190
NlaIV	GGNNCC	5 cut(s)	2076, 2364, 2388, 2667, 3011
NmeAIII	GCCGAG	1 cut(s)	2391
NmuCI	GTSAC	3 cut(s)	434, 855, 3337
NsbI	TGCGCA	1 cut(s)	2546
NspI	RCATGY	2 cut(s)	1522, 3547
NspV	TTCGAA	1 cut(s)	692
OliI	CACNNNNGTG	1 cut(s)	739
PagI	TCATGA	1 cut(s)	1039
PciI	ACATGT	1 cut(s)	1518
PcsI	WCGNNNNNNNCGW	2 cut(s)	152, 1139
PctI	GAATGC	1 cut(s)	1516
PdmI	GAANNNNTTC	1 cut(s)	2204
PflMI	CCANNNNNTGG	1 cut(s)	833
PfoI	TCCNGGA	2 cut(s)	305, 1896
PinAI	ACCGGT	2 cut(s)	2071, 3356
PkrI	GCNGC	7 cut(s)	649, 1414, 1586, 2247, 2700, 2703, 3073
PleI	GAGTC	6 cut(s)	206, 576, 989, 1335, 2490, 2884
PpsI	GAGTC	6 cut(s)	206, 576, 989, 1335, 2490, 2884
Ppu21I	YACGTR	1 cut(s)	183
PscI	ACATGT	1 cut(s)	1518
PsiI	TTATAA	2 cut(s)	729, 1371
Psp124BI	GAGCTC	2 cut(s)	1119, 1548
Psp1406I	AACGTT	1 cut(s)	141
Psp6I	CCWGG	3 cut(s)	1644, 1896, 2809
PspGI	CCWGG	3 cut(s)	1644, 1896, 2809
PspN4I	GGNNCC	5 cut(s)	2076, 2364, 2388, 2667, 3011
PspPI	GGNCC	5 cut(s)	671, 887, 1781, 2069, 3359
PstI	CTGCAG	1 cut(s)	1399
PstNI	CAGNNNCTG	2 cut(s)	1645, 2635
PsuI	RGATCY	6 cut(s)	1258, 1576, 1900, 1925, 2301, 2386
PvuII	CAGCTG	1 cut(s)	2248
RsaI	GTAC	4 cut(s)	990, 1558, 2255, 3229
RsaNI	GTAC	4 cut(s)	989, 1557, 2254, 3228
RseI	CAYNNNNRTG	1 cut(s)	739
SacI	GAGCTC	2 cut(s)	1119, 1548
SatI	GCNGC	7 cut(s)	648, 1413, 1585, 2246, 2699, 2702, 3072
Sau96I	GGNCC	5 cut(s)	671, 887, 1781, 2069, 3359
SchI	GAGTC	6 cut(s)	207, 576, 989, 1336, 2490, 2884
ScrFI	CCNGG	6 cut(s)	307, 1646, 1672, 1898, 2212, 2811
SduI	GDGCHC	3 cut(s)	1119, 1548, 3283
SexAI	ACCWGGT	1 cut(s)	2809
SfaNI	GCATC	5 cut(s)	852, 1707, 2685, 2917, 3012
SfcI	CTRYAG	3 cut(s)	1395, 2739, 3307
SfuI	TTCGAA	1 cut(s)	692
SinI	GGWCC	4 cut(s)	671, 887, 2069, 3359
SmiMI	CAYNNNNRTG	1 cut(s)	739
SmlI	CTYRAG	6 cut(s)	737, 851, 1955, 2119, 2644, 3566
SmoI	CTYRAG	6 cut(s)	737, 851, 1955, 2119, 2644, 3566
SsiI	CCGC	9 cut(s)	15, 54, 153, 317, 801, 1426, 2702, 2828, 3179
SstI	GAGCTC	2 cut(s)	1119, 1548
StyD4I	CCNGG	6 cut(s)	305, 1644, 1670, 1896, 2210, 2809
StyI	CCWWGG	4 cut(s)	1109, 1744, 2394, 3421
TaaI	ACNGT	9 cut(s)	219, 492, 675, 2160, 2777, 2791, 2824, 3101, 3232
TaiI	ACGT	4 cut(s)	144, 185, 507, 929
TaqI	TCGA	9 cut(s)	47, 257, 426, 692, 717, 1103, 2457, 2694, 2733
TatI	WGTACW	2 cut(s)	1556, 3227
TauI	GCSGC	1 cut(s)	2704
TseFI	GTSAC	3 cut(s)	434, 855, 3337
TseI	GCWGC	6 cut(s)	647, 1412, 1584, 2245, 2698, 3071
Tsp45I	GTSAC	3 cut(s)	434, 855, 3337
TspDTI	ATGAA	7 cut(s)	123, 463, 948, 957, 2139, 2863, 3094
TspGWI	ACGGA	1 cut(s)	597
Van91I	CCANNNNNTGG	1 cut(s)	833
Vha464I	CTTAAG	3 cut(s)	1955, 2644, 3566
VpaK11BI	GGWCC	4 cut(s)	671, 887, 2069, 3359
XapI	RAATTY	5 cut(s)	252, 367, 603, 1159, 2870
XbaI	TCTAGA	1 cut(s)	1378
XceI	RCATGY	2 cut(s)	1522, 3547
XcmI	CCANNNNNNNNNTGG	2 cut(s)	574, 1329
XmaJI	CCTAGG	1 cut(s)	1109
XmiI	GTMKAC	2 cut(s)	784, 2162
XmnI	GAANNNNTTC	1 cut(s)	2204
ZraI	GACGTC	1 cut(s)	505

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.