AT5G07480

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
2367167 .. 2369696
2530 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G07480.1

Sequence Viewer

Length: 1071 bp
ATGGAGAAAGGTGAGGATTCAAGCACATTCAAAATGGGGAATTCTGCACAAGAGAGGAGTTTACCGTATGTACCTGACTGTTACGTCGTCCCGCCTTCTAGCAAACCATGTGACTCAAATTCCGGAATCGTACCCACTATCGATGTTTCTCGGCTGAAAGGGGGAGATGATGAACGTCGAGGGGTTATTCAGGAGCTAAGTTTGGCATGTCAACATCTTGGTTTTTTTCAAATAGTGAACCATGGAATCAACCAGAACATACTAGATGACGCCTTGGAGGTTGCGAATAGCTTCTTCGAGCTGCCGGCGAAGGAGAAGAAACAGTTTATGTCAAACGATGTCTACGCACCGGTTCGGTACAGTACGAGTCTCAAGGACGGTTTGGACACGATCCAATTCTGGAGGATTTTTCTAAAGCACTATGCACATCCTCTTCATCGTTGGATTCATCTTTGGCCAGAGAATCCACCCGGATACAGGGAAAAAATGGGAAAGTTCTGCGAGGAAGTGAGGAAACTATCGATAGAGTTAATGGGAGCAATAACGGAAAGCCTAGGTCTAGGGAGAGACTACCTGTCGTCTCGGATGGACGAAAACGGCATGCAAGTCATGACAGTTAACTGCTATCCACCCTGTCCGGACCCTGAGACGGCGCTAGGCCTGCCGCCGCATTCAGACTATAGTTGCATCACCCTCCTTCTACAGAACTTGGACGGTCTCAAGATCTTCGATCCAATGGCTCACGGTGGATCTGGCCGTTGGGTTGGTGTCCCACAAGTCACAGGTGTACTTAAGGTCCATATTGGTGACCATGTGGAAGTTCTAAGCAATGGATTATACAAGAGCATCGTTCATAAAGTCACTTTGAATGAAGAGAAGACGAGAATCTCTCTCGCGAGCTTGCATAGCTTGGGTATGGACGATAAGATGAGTGTACCGCGCGAATTGGTTAACGATGAAAATCCGGTTCGGTATAAAGAGAGCAGCTTTAACGATTTTCTTGATTTTCTTGTCAAAAATGACATTTCTCAAGGGGATAGGTTTATTGACACTCTCAGAATCAAGGACTGA

Protein Analysis

356

Amino Acids

40.1

Weight (kDa)

5.57

Isoelectric Point (pI)

42.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 44 - 155 6.4e-24 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 203 - 301 3.1e-25 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011862)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 83
AccI GTMKAC 1 cut(s) 342
AccII CGCG 3 cut(s) 896, 940, 942
AccIII TCCGGA 2 cut(s) 122, 637
AciI CCGC 4 cut(s) 92, 665, 668, 938
AclWI GGATC 3 cut(s) 385, 725, 757
AcoI YGGCCR 2 cut(s) 455, 754
AcsI RAATTY 2 cut(s) 40, 118
AcyI GRCGYC 1 cut(s) 270
AfaI GTAC 6 cut(s) 72, 132, 359, 364, 789, 936
AfiI CCNNNNNNNGG 2 cut(s) 477, 649
AflII CTTAAG 1 cut(s) 791
AgeI ACCGGT 1 cut(s) 349
AgsI TTSAA 4 cut(s) 21, 31, 230, 868
AhdI GACNNNNNGTC 1 cut(s) 574
AluBI AGCT 6 cut(s) 196, 291, 301, 900, 909, 987
AluI AGCT 6 cut(s) 196, 291, 301, 900, 909, 987
Alw26I GTCTC 5 cut(s) 374, 561, 585, 641, 722
AlwI GGATC 3 cut(s) 385, 725, 757
Aor13HI TCCGGA 2 cut(s) 122, 637
AoxI GGCC 3 cut(s) 455, 658, 754
ApeKI GCWGC 2 cut(s) 301, 984
ApoI RAATTY 2 cut(s) 40, 118
AsiGI ACCGGT 1 cut(s) 349
Asp700I GAANNNNTTC 1 cut(s) 290
AspA2I CCTAGG 1 cut(s) 553
AspLEI GCGC 2 cut(s) 655, 942
AspS9I GGNCC 2 cut(s) 640, 796
AsuC2I CCSGG 1 cut(s) 471
AsuHPI GGTGA 3 cut(s) 23, 682, 818
AvaII GGWCC 2 cut(s) 640, 796
AvrII CCTAGG 1 cut(s) 553
BalI TGGCCA 1 cut(s) 457
BbsI GAAGAC 1 cut(s) 884
BbvI GCAGC 2 cut(s) 288, 996
BccI CCATC 1 cut(s) 580
BceAI ACGGC 3 cut(s) 613, 666, 741
BciVI GTATCC 1 cut(s) 467
BcnI CCSGG 1 cut(s) 471
BcoDI GTCTC 5 cut(s) 374, 561, 585, 641, 722
BfaI CTAG 5 cut(s) 99, 263, 554, 560, 656
BfmI CTRYAG 2 cut(s) 679, 701
BfoI RGCGCY 1 cut(s) 656
BfrI CTTAAG 1 cut(s) 791
BfuI GTATCC 1 cut(s) 467
BglII AGATCT 1 cut(s) 723
BisI GCNGC 4 cut(s) 302, 665, 668, 985
BlnI CCTAGG 1 cut(s) 553
BlsI GCNGC 4 cut(s) 303, 666, 669, 986
Bme1390I CCNGG 1 cut(s) 471
Bme18I GGWCC 2 cut(s) 640, 796
BmeRI GACNNNNNGTC 1 cut(s) 574
BmgT120I GGNCC 2 cut(s) 640, 796
BmiI GGNNCC 1 cut(s) 642
BmrFI CCNGG 1 cut(s) 471
BmsI GCATC 2 cut(s) 696, 855
BpiI GAAGAC 1 cut(s) 884
BplI GAGNNNNNCTC 2 cut(s) 874, 906
BpmI CTGGAG 1 cut(s) 421
BpuEI CTTGAG 3 cut(s) 356, 704, 1014
BpuMI CCSGG 1 cut(s) 471
Bsa29I ATCGAT 2 cut(s) 141, 521
BsaBI GATNNNNATC 1 cut(s) 960
BsaHI GRCGYC 1 cut(s) 270
BsaI GGTCTC 1 cut(s) 722
BsaJI CCNNGG 3 cut(s) 241, 273, 553
BsaWI WCCGGW 4 cut(s) 122, 349, 637, 964
Bsc4I CCNNNNNNNGG 2 cut(s) 477, 649
Bse118I RCCGGY 2 cut(s) 304, 349
Bse3DI GCAATG 1 cut(s) 835
Bse8I GATNNNNATC 1 cut(s) 960
BseAI TCCGGA 2 cut(s) 122, 637
BseCI ATCGAT 2 cut(s) 141, 521
BseDI CCNNGG 3 cut(s) 241, 273, 553
BseGI GGATG 2 cut(s) 427, 591
BseJI GATNNNNATC 1 cut(s) 960
BseLI CCNNNNNNNGG 2 cut(s) 477, 649
BseMI GCAATG 1 cut(s) 835
BseMII CTCAG 2 cut(s) 636, 1069
BseRI GAGGAG 1 cut(s) 70
BseXI GCAGC 2 cut(s) 288, 996
BsgI GTGCAG 1 cut(s) 30
Bsh1236I CGCG 3 cut(s) 896, 940, 942
BshFI GGCC 3 cut(s) 457, 660, 756
BshTI ACCGGT 1 cut(s) 349
BshVI ATCGAT 2 cut(s) 141, 521
BsiSI CCGG 6 cut(s) 123, 305, 350, 471, 638, 965
BslFI GGGAC 2 cut(s) 74, 755
BslI CCNNNNNNNGG 2 cut(s) 477, 649
BsmAI GTCTC 5 cut(s) 374, 561, 585, 641, 722
BsmBI CGTCTC 2 cut(s) 585, 641
BsmFI GGGAC 2 cut(s) 74, 755
BsmI GAATGC 1 cut(s) 670
BsnI GGCC 3 cut(s) 457, 660, 756
Bso31I GGTCTC 1 cut(s) 722
Bsp13I TCCGGA 2 cut(s) 122, 637
Bsp143I GATC 4 cut(s) 390, 723, 730, 749
Bsp19I CCATGG 1 cut(s) 241
Bsp68I TCGCGA 1 cut(s) 896
BspACI CCGC 4 cut(s) 92, 665, 668, 938
BspANI GGCC 3 cut(s) 457, 660, 756
BspCNI CTCAG 2 cut(s) 637, 1068
BspDI ATCGAT 2 cut(s) 141, 521
BspEI TCCGGA 2 cut(s) 122, 637
BspFNI CGCG 3 cut(s) 896, 940, 942
BspHI TCATGA 1 cut(s) 609
BspLI GGNNCC 1 cut(s) 642
BspPI GGATC 3 cut(s) 385, 725, 757
BspTI CTTAAG 1 cut(s) 791
BspTNI GGTCTC 1 cut(s) 722
BsrDI GCAATG 1 cut(s) 835
BsrFI RCCGGY 2 cut(s) 304, 349
BssAI RCCGGY 2 cut(s) 304, 349
BssECI CCNNGG 3 cut(s) 241, 273, 553
BssMI GATC 4 cut(s) 390, 723, 730, 749
BssNI GRCGYC 1 cut(s) 270
BssT1I CCWWGG 3 cut(s) 241, 273, 553
Bst4CI ACNGT 8 cut(s) 66, 80, 324, 362, 380, 616, 716, 746
Bst6I CTCTTC 2 cut(s) 438, 867
BstACI GRCGYC 1 cut(s) 270
BstAFI CTTAAG 1 cut(s) 791
BstC8I GCNNGC 5 cut(s) 306, 602, 662, 898, 902
BstDEI CTNAG 4 cut(s) 197, 645, 824, 1055
BstDSI CCRYGG 1 cut(s) 241
BstEII GGTNACC 1 cut(s) 806
BstF5I GGATG 2 cut(s) 427, 591
BstFNI CGCG 3 cut(s) 896, 940, 942
BstH2I RGCGCY 1 cut(s) 656
BstHHI GCGC 2 cut(s) 655, 942
BstKTI GATC 4 cut(s) 393, 726, 733, 752
BstMAI GTCTC 5 cut(s) 374, 561, 585, 641, 722
BstMBI GATC 4 cut(s) 390, 723, 730, 749
BstMWI GCNNNNNNNGC 2 cut(s) 661, 906
BstNSI RCATGY 2 cut(s) 210, 604
BstPI GGTNACC 1 cut(s) 806
BstSCI CCNGG 1 cut(s) 469
BstSFI CTRYAG 2 cut(s) 679, 701
BstUI CGCG 3 cut(s) 896, 940, 942
BstV1I GCAGC 2 cut(s) 288, 996
BstV2I GAAGAC 1 cut(s) 884
BstX2I RGATCY 2 cut(s) 723, 749
BstYI RGATCY 2 cut(s) 723, 749
Bsu15I ATCGAT 2 cut(s) 141, 521
BsuI GTATCC 1 cut(s) 467
BsuRI GGCC 3 cut(s) 457, 660, 756
BsuTUI ATCGAT 2 cut(s) 141, 521
BtgI CCRYGG 1 cut(s) 241
BtsCI GGATG 2 cut(s) 427, 591
BtuMI TCGCGA 1 cut(s) 896
Cac8I GCNNGC 5 cut(s) 306, 602, 662, 898, 902
CciI TCATGA 1 cut(s) 609
CfoI GCGC 2 cut(s) 655, 942
Cfr10I RCCGGY 2 cut(s) 304, 349
Cfr13I GGNCC 2 cut(s) 640, 796
ClaI ATCGAT 2 cut(s) 141, 521
CseI GACGC 1 cut(s) 278
Csp6I GTAC 6 cut(s) 71, 131, 358, 363, 788, 935
CspAI ACCGGT 1 cut(s) 349
CviAII CATG 6 cut(s) 108, 207, 242, 601, 610, 812
CviQI GTAC 6 cut(s) 71, 131, 358, 363, 788, 935
DdeI CTNAG 4 cut(s) 197, 645, 824, 1055
DpnI GATC 4 cut(s) 392, 725, 732, 751
DpnII GATC 4 cut(s) 390, 723, 730, 749
DrdI GACNNNNNNGTC 1 cut(s) 83
DriI GACNNNNNGTC 1 cut(s) 574
DseDI GACNNNNNNGTC 1 cut(s) 83
EaeI YGGCCR 2 cut(s) 455, 754
Eam1104I CTCTTC 2 cut(s) 438, 867
Eam1105I GACNNNNNGTC 1 cut(s) 574
EarI CTCTTC 2 cut(s) 438, 867
Eco130I CCWWGG 3 cut(s) 241, 273, 553
Eco147I AGGCCT 1 cut(s) 660
Eco31I GGTCTC 1 cut(s) 722
Eco47I GGWCC 2 cut(s) 640, 796
Eco91I GGTNACC 1 cut(s) 806
EcoO65I GGTNACC 1 cut(s) 806
EcoRI GAATTC 1 cut(s) 40
EcoT14I CCWWGG 3 cut(s) 241, 273, 553
ErhI CCWWGG 3 cut(s) 241, 273, 553
Esp3I CGTCTC 2 cut(s) 585, 641
FaeI CATG 6 cut(s) 111, 210, 245, 604, 613, 815
FaqI GGGAC 2 cut(s) 74, 755
FatI CATG 6 cut(s) 107, 206, 241, 600, 609, 811
FauI CCCGC 1 cut(s) 99
FblI GTMKAC 1 cut(s) 342
Fnu4HI GCNGC 4 cut(s) 302, 665, 668, 985
FokI GGATG 2 cut(s) 414, 598
Fsp4HI GCNGC 4 cut(s) 302, 665, 668, 985
FspBI CTAG 5 cut(s) 99, 263, 554, 560, 656
GlaI GCGC 2 cut(s) 654, 941
GluI GCNGC 4 cut(s) 302, 665, 668, 985
GsuI CTGGAG 1 cut(s) 421
HaeII RGCGCY 1 cut(s) 656
HaeIII GGCC 3 cut(s) 457, 660, 756
HapII CCGG 6 cut(s) 123, 305, 350, 471, 638, 965
HgaI GACGC 1 cut(s) 278
HhaI GCGC 2 cut(s) 655, 942
Hin1I GRCGYC 1 cut(s) 270
Hin1II CATG 6 cut(s) 111, 210, 245, 604, 613, 815
Hin6I GCGC 2 cut(s) 653, 940
HinP1I GCGC 2 cut(s) 653, 940
HincII GTYRAC 3 cut(s) 212, 619, 952
HindII GTYRAC 3 cut(s) 212, 619, 952
HinfI GANTC 9 cut(s) 17, 113, 126, 246, 367, 445, 463, 885, 1059
HpaI GTTAAC 2 cut(s) 619, 952
HpaII CCGG 6 cut(s) 123, 305, 350, 471, 638, 965
HphI GGTGA 3 cut(s) 23, 682, 818
Hpy166II GTNNAC 8 cut(s) 62, 212, 238, 343, 619, 788, 935, 952
Hpy188I TCNGA 3 cut(s) 585, 676, 1058
Hpy188III TCNNGA 8 cut(s) 123, 191, 400, 610, 638, 721, 895, 1001
Hpy8I GTNNAC 8 cut(s) 62, 212, 238, 343, 619, 788, 935, 952
Hpy99I CGWCG 2 cut(s) 89, 180
HpyAV CCTTC 3 cut(s) 105, 304, 707
HpyCH4III ACNGT 8 cut(s) 66, 80, 324, 362, 380, 616, 716, 746
HpyCH4IV ACGT 2 cut(s) 84, 175
HpyCH4V TGCA 5 cut(s) 47, 425, 604, 687, 904
HpyF10VI GCNNNNNNNGC 2 cut(s) 661, 906
HpyF3I CTNAG 4 cut(s) 197, 645, 824, 1055
HpySE526I ACGT 2 cut(s) 84, 175
Hsp92I GRCGYC 1 cut(s) 270
Hsp92II CATG 6 cut(s) 111, 210, 245, 604, 613, 815
HspAI GCGC 2 cut(s) 653, 940
Kpn2I TCCGGA 2 cut(s) 122, 637
KroI GCCGGC 1 cut(s) 304
KroNI GCCGGC 1 cut(s) 306
KspAI GTTAAC 2 cut(s) 619, 952
Kzo9I GATC 4 cut(s) 390, 723, 730, 749
LmnI GCTCC 2 cut(s) 193, 536
Lsp1109I GCAGC 2 cut(s) 288, 996
LweI GCATC 2 cut(s) 696, 855
MaeI CTAG 5 cut(s) 99, 263, 554, 560, 656
MaeII ACGT 2 cut(s) 84, 175
MaeIII GTNAC 5 cut(s) 80, 110, 778, 806, 859
MalI GATC 4 cut(s) 392, 725, 732, 751
MboI GATC 4 cut(s) 390, 723, 730, 749
MboII GAAGA 6 cut(s) 286, 328, 425, 718, 884, 889
MflI RGATCY 2 cut(s) 723, 749
MlsI TGGCCA 1 cut(s) 457
MluCI AATT 4 cut(s) 40, 118, 395, 944
MluNI TGGCCA 1 cut(s) 457
MlyI GAGTC 2 cut(s) 107, 376
MmeI TCCRAC 1 cut(s) 422
MnlI CCTC 9 cut(s) 7, 48, 173, 271, 396, 441, 496, 504, 704
Mox20I TGGCCA 1 cut(s) 457
MroI TCCGGA 2 cut(s) 122, 637
MroNI GCCGGC 1 cut(s) 304
MroXI GAANNNNTTC 1 cut(s) 290
MscI TGGCCA 1 cut(s) 457
MseI TTAA 5 cut(s) 530, 618, 792, 951, 990
MslI CAYNNNNRTG 1 cut(s) 804
Msp20I TGGCCA 1 cut(s) 457
MspCI CTTAAG 1 cut(s) 791
MspI CCGG 6 cut(s) 123, 305, 350, 471, 638, 965
MspR9I CCNGG 1 cut(s) 471
Mva1269I GAATGC 1 cut(s) 670
MvnI CGCG 3 cut(s) 896, 940, 942
MwoI GCNNNNNNNGC 2 cut(s) 661, 906
NaeI GCCGGC 1 cut(s) 306
NciI CCSGG 1 cut(s) 471
NcoI CCATGG 1 cut(s) 241
NdeII GATC 4 cut(s) 390, 723, 730, 749
NgoMIV GCCGGC 1 cut(s) 304
NlaIII CATG 6 cut(s) 111, 210, 245, 604, 613, 815
NlaIV GGNNCC 1 cut(s) 642
NmeAIII GCCGAG 1 cut(s) 130
NmuCI GTSAC 4 cut(s) 110, 778, 806, 859
NruI TCGCGA 1 cut(s) 896
NspI RCATGY 2 cut(s) 210, 604
PaeI GCATGC 1 cut(s) 604
PagI TCATGA 1 cut(s) 609
PceI AGGCCT 1 cut(s) 660
PctI GAATGC 1 cut(s) 670
PdiI GCCGGC 1 cut(s) 306
PdmI GAANNNNTTC 1 cut(s) 290
PfeI GAWTC 7 cut(s) 17, 126, 246, 445, 463, 885, 1059
PinAI ACCGGT 1 cut(s) 349
PkrI GCNGC 4 cut(s) 303, 666, 669, 986
PleI GAGTC 2 cut(s) 107, 375
PpsI GAGTC 2 cut(s) 107, 375
PspEI GGTNACC 1 cut(s) 806
PspN4I GGNNCC 1 cut(s) 642
PspPI GGNCC 2 cut(s) 640, 796
PsuI RGATCY 2 cut(s) 723, 749
RruI TCGCGA 1 cut(s) 896
RsaI GTAC 6 cut(s) 72, 132, 359, 364, 789, 936
RsaNI GTAC 6 cut(s) 71, 131, 358, 363, 788, 935
RseI CAYNNNNRTG 1 cut(s) 804
SaqAI TTAA 5 cut(s) 530, 618, 792, 951, 990
SatI GCNGC 4 cut(s) 302, 665, 668, 985
Sau3AI GATC 4 cut(s) 390, 723, 730, 749
Sau96I GGNCC 2 cut(s) 640, 796
SchI GAGTC 2 cut(s) 107, 376
ScrFI CCNGG 1 cut(s) 471
SfaNI GCATC 2 cut(s) 696, 855
SfcI CTRYAG 2 cut(s) 679, 701
SinI GGWCC 2 cut(s) 640, 796
SmiMI CAYNNNNRTG 1 cut(s) 804
SmlI CTYRAG 4 cut(s) 371, 719, 791, 1029
SmoI CTYRAG 4 cut(s) 371, 719, 791, 1029
SphI GCATGC 1 cut(s) 604
Sse9I AATT 4 cut(s) 40, 118, 395, 944
SseBI AGGCCT 1 cut(s) 660
SsiI CCGC 4 cut(s) 92, 665, 668, 938
SspMI CTAG 5 cut(s) 99, 263, 554, 560, 656
StuI AGGCCT 1 cut(s) 660
StyD4I CCNGG 1 cut(s) 469
StyI CCWWGG 3 cut(s) 241, 273, 553
TaaI ACNGT 8 cut(s) 66, 80, 324, 362, 380, 616, 716, 746
TaiI ACGT 2 cut(s) 87, 178
TaqI TCGA 5 cut(s) 141, 178, 297, 521, 729
TasI AATT 4 cut(s) 40, 118, 395, 944
TatI WGTACW 1 cut(s) 787
TauI GCSGC 2 cut(s) 667, 670
TfiI GAWTC 7 cut(s) 17, 126, 246, 445, 463, 885, 1059
Tru1I TTAA 5 cut(s) 530, 618, 792, 951, 990
Tru9I TTAA 5 cut(s) 530, 618, 792, 951, 990
TseFI GTSAC 4 cut(s) 110, 778, 806, 859
TseI GCWGC 2 cut(s) 301, 984
Tsp45I GTSAC 4 cut(s) 110, 778, 806, 859
TspDTI ATGAA 6 cut(s) 186, 425, 437, 842, 885, 972
TspGWI ACGGA 1 cut(s) 560
Vha464I CTTAAG 1 cut(s) 791
VpaK11BI GGWCC 2 cut(s) 640, 796
XapI RAATTY 2 cut(s) 40, 118
XceI RCATGY 2 cut(s) 210, 604
XmaJI CCTAGG 1 cut(s) 553
XmiI GTMKAC 1 cut(s) 342
XmnI GAANNNNTTC 1 cut(s) 290
XspI CTAG 5 cut(s) 99, 263, 554, 560, 656
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.