FvH4_7g30770

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
22336007 .. 22339562
3556 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g30770.t1

Sequence Viewer

Length: 1038 bp
ATGGGAGATGATGACGAGAGCTGTTCGAGATCACTTCCGATGGGGAAGACTGCAGCAGAGAGGGGCTTGCCCGAGTGTTATTTGAACCCAACTTCACACCATGCCAGCTTAACTCCAGAAGTTGCCAATGTACCCACCATTGATTTTGGTAAGCTCAAGAAGGGTTCTGATGAAGAAGAACGAGCCACTGTAATCCAAGAAATTAGAACGGCATGTCGTCAACTTGGATTCTTTCAAATTATCAACCATGGAATTCCGCAATCGGTGCTTGATGGGGCGCTGGTTGTGGCTTCGGAGTTTTTCGAGTTGCCTGATTCAGAGAAGGCAAAGTTCATGTCTAAAGATGTTCACAAAGCAGTGAGGTATGAAACAAGCTTCAAACCCTGGAGGGTCTTCCTCAAACATTATGCTCACCCCTTGGAAAATTGGATCGATTCTTGGCCAAACAATCCACCCAGCTACAGGGAAACCATGGGAGAGTACTGCAGAGAAGTAATGGAACTGAGCTTGGAAGTAACAAGTGCCATCACTGAGAGCCTAGGGATAGGTCCCACTTACTTAAACAAGAAAATGGAAAACGGAATGCAAGTGATTGCAGTCAATGGGTACCCACCGTGCCCCAGGCCAGAAATGACACTAGGGGCGCCGCCTCATTCGGACCACAGCTGCTTCACCATCATGCTTCAGAGCTCCGCTGGACTGGAAATCATGGACATTGGGGACGGAAAATGGAAACTAATTCCGGAACTTGAGACTGCTCTTCAAGTCCATGTGGGTGACCATTTTGAGGTACTAAGCAATGGGTTGTACAAGAGTGTTGTGCACAGGGCGACACTGAACAGTGAAAGGACCAGAATCTCAGTTGCTAGCTTCCACAGTTTGGGAATTGATGAGAAGATGAAGACTGCTGAGGAGCTTGTGAGTGAAGAACAGCCTGCCAAGTACAGAGAAAGTAGCTTCAGAGATTTTCTGAACTTTCTCTCAGGTAATGATATAGCAGAAGGAAACACCTTTCTCGACTCACTCAAACTAGCATAA

Protein Analysis

346

Amino Acids

38.56

Weight (kDa)

5.23

Isoelectric Point (pI)

38.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 44 - 138 5.1e-23 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 196 - 292 2.5e-25 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011862)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 606
AccB1I GGYRCC 2 cut(s) 606, 643
AccB7I CCANNNNNTGG 1 cut(s) 880
AccIII TCCGGA 1 cut(s) 742
AciI CCGC 3 cut(s) 257, 647, 693
AclWI GGATC 1 cut(s) 437
AcoI YGGCCR 1 cut(s) 440
AcsI RAATTY 1 cut(s) 252
AcuI CTGAAG 2 cut(s) 668, 943
AcyI GRCGYC 1 cut(s) 644
AfaI GTAC 6 cut(s) 132, 482, 608, 792, 809, 944
AfiI CCNNNNNNNGG 3 cut(s) 462, 787, 880
AgsI TTSAA 4 cut(s) 85, 236, 379, 764
AjnI CCWGG 2 cut(s) 383, 620
Alw21I GWGCWC 2 cut(s) 692, 825
Alw26I GTCTC 1 cut(s) 746
Alw44I GTGCAC 1 cut(s) 821
AlwI GGATC 1 cut(s) 437
Ama87I CYCGRG 1 cut(s) 71
Aor13HI TCCGGA 1 cut(s) 742
AoxI GGCC 2 cut(s) 440, 623
ApaLI GTGCAC 1 cut(s) 821
ApeKI GCWGC 2 cut(s) 53, 666
ApoI RAATTY 1 cut(s) 252
ArsI GACNNNNNNTTYG 2 cut(s) 320, 352
Asp718I GGTACC 1 cut(s) 606
AspA2I CCTAGG 1 cut(s) 538
AspLEI GCGC 2 cut(s) 280, 646
AspS9I GGNCC 3 cut(s) 548, 658, 849
AsuHPI GGTGA 3 cut(s) 404, 664, 788
AsuNHI GCTAGC 1 cut(s) 866
AvaI CYCGRG 1 cut(s) 71
AvaII GGWCC 3 cut(s) 548, 658, 849
AvrII CCTAGG 1 cut(s) 538
BaeGI GKGCMC 2 cut(s) 620, 825
BalI TGGCCA 1 cut(s) 442
BanI GGYRCC 2 cut(s) 606, 643
BanII GRGCYC 1 cut(s) 692
BbsI GAAGAC 3 cut(s) 53, 385, 908
Bbv12I GWGCWC 2 cut(s) 692, 825
BbvCI CCTCAGC 1 cut(s) 909
BbvI GCAGC 2 cut(s) 65, 653
BccI CCATC 4 cut(s) 34, 266, 533, 683
BceAI ACGGC 1 cut(s) 225
BciT130I CCWGG 2 cut(s) 385, 622
BcoDI GTCTC 1 cut(s) 746
BfaI CTAG 4 cut(s) 539, 638, 867, 1031
BfmI CTRYAG 3 cut(s) 51, 460, 484
BfoI RGCGCY 2 cut(s) 281, 647
BisI GCNGC 3 cut(s) 54, 647, 667
BlnI CCTAGG 1 cut(s) 538
BlsI GCNGC 3 cut(s) 55, 648, 668
BmcAI AGTACT 1 cut(s) 482
Bme1390I CCNGG 2 cut(s) 385, 622
Bme18I GGWCC 3 cut(s) 548, 658, 849
BmeT110I CYCGRG 1 cut(s) 71
BmgT120I GGNCC 3 cut(s) 548, 658, 849
BmiI GGNNCC 3 cut(s) 550, 608, 645
BmrFI CCNGG 2 cut(s) 385, 622
BmtI GCTAGC 1 cut(s) 870
BpiI GAAGAC 3 cut(s) 53, 385, 908
BpmI CTGGAG 2 cut(s) 99, 406
Bpu10I CCTNAGC 1 cut(s) 909
BpuEI CTTGAG 2 cut(s) 140, 770
Bsa29I ATCGAT 1 cut(s) 432
BsaHI GRCGYC 1 cut(s) 644
BsaJI CCNNGG 6 cut(s) 247, 383, 417, 471, 538, 620
BsaWI WCCGGW 1 cut(s) 742
Bsc4I CCNNNNNNNGG 3 cut(s) 462, 787, 880
Bse1I ACTGG 1 cut(s) 705
Bse3DI GCAATG 1 cut(s) 805
BseAI TCCGGA 1 cut(s) 742
BseBI CCWGG 2 cut(s) 385, 622
BseCI ATCGAT 1 cut(s) 432
BseDI CCNNGG 6 cut(s) 247, 383, 417, 471, 538, 620
BseLI CCNNNNNNNGG 3 cut(s) 462, 787, 880
BseMI GCAATG 1 cut(s) 805
BseMII CTCAG 5 cut(s) 494, 522, 873, 900, 996
BseNI ACTGG 1 cut(s) 705
BseRI GAGGAG 1 cut(s) 926
BseSI GKGCMC 2 cut(s) 620, 825
BseXI GCAGC 2 cut(s) 65, 653
BseYI CCCAGC 1 cut(s) 455
BshFI GGCC 2 cut(s) 442, 625
BshNI GGYRCC 2 cut(s) 606, 643
BshVI ATCGAT 1 cut(s) 432
BsiHKAI GWGCWC 2 cut(s) 692, 825
BsiHKCI CYCGRG 1 cut(s) 71
BsiSI CCGG 1 cut(s) 743
BslFI GGGAC 2 cut(s) 534, 734
BslI CCNNNNNNNGG 3 cut(s) 462, 787, 880
BsmAI GTCTC 1 cut(s) 746
BsmFI GGGAC 2 cut(s) 534, 734
BsmI GAATGC 1 cut(s) 588
BsnI GGCC 2 cut(s) 442, 625
BsoBI CYCGRG 1 cut(s) 71
Bsp1286I GDGCHC 3 cut(s) 620, 692, 825
Bsp13I TCCGGA 1 cut(s) 742
Bsp1407I TGTACA 1 cut(s) 807
Bsp143I GATC 2 cut(s) 29, 429
Bsp19I CCATGG 2 cut(s) 247, 471
BspACI CCGC 3 cut(s) 257, 647, 693
BspANI GGCC 2 cut(s) 442, 625
BspCNI CTCAG 5 cut(s) 495, 523, 872, 901, 995
BspDI ATCGAT 1 cut(s) 432
BspEI TCCGGA 1 cut(s) 742
BspLI GGNNCC 3 cut(s) 550, 608, 645
BspMAI CTGCAG 2 cut(s) 55, 488
BspOI GCTAGC 1 cut(s) 870
BspPI GGATC 1 cut(s) 437
BspQI GCTCTTC 1 cut(s) 765
BspT107I GGYRCC 2 cut(s) 606, 643
BsrDI GCAATG 1 cut(s) 805
BsrGI TGTACA 1 cut(s) 807
BsrI ACTGG 1 cut(s) 705
BssECI CCNNGG 6 cut(s) 247, 383, 417, 471, 538, 620
BssMI GATC 2 cut(s) 29, 429
BssNI GRCGYC 1 cut(s) 644
BssT1I CCWWGG 4 cut(s) 247, 417, 471, 538
Bst2UI CCWGG 2 cut(s) 385, 622
Bst4CI ACNGT 4 cut(s) 190, 615, 842, 878
Bst6I CTCTTC 1 cut(s) 765
BstACI GRCGYC 1 cut(s) 644
BstAPI GCANNNNNTGC 1 cut(s) 265
BstAUI TGTACA 1 cut(s) 807
BstC8I GCNNGC 4 cut(s) 68, 106, 868, 936
BstDEI CTNAG 6 cut(s) 503, 531, 794, 859, 909, 982
BstDSI CCRYGG 2 cut(s) 247, 471
BstEII GGTNACC 1 cut(s) 776
BstH2I RGCGCY 2 cut(s) 281, 647
BstHHI GCGC 2 cut(s) 280, 646
BstKTI GATC 2 cut(s) 32, 432
BstMAI GTCTC 1 cut(s) 746
BstMBI GATC 2 cut(s) 29, 429
BstMWI GCNNNNNNNGC 1 cut(s) 265
BstNI CCWGG 2 cut(s) 385, 622
BstNSI RCATGY 1 cut(s) 216
BstPI GGTNACC 1 cut(s) 776
BstSCI CCNGG 2 cut(s) 383, 620
BstSFI CTRYAG 3 cut(s) 51, 460, 484
BstSLI GKGCMC 2 cut(s) 620, 825
BstV1I GCAGC 2 cut(s) 65, 653
BstV2I GAAGAC 3 cut(s) 53, 385, 908
Bsu15I ATCGAT 1 cut(s) 432
BsuRI GGCC 2 cut(s) 442, 625
BsuTUI ATCGAT 1 cut(s) 432
BtgI CCRYGG 2 cut(s) 247, 471
BtsI GCAGTG 1 cut(s) 363
BtsIMutI CAGTG 5 cut(s) 186, 363, 528, 833, 847
Cac8I GCNNGC 4 cut(s) 68, 106, 868, 936
CfoI GCGC 2 cut(s) 280, 646
Cfr13I GGNCC 3 cut(s) 548, 658, 849
ClaI ATCGAT 1 cut(s) 432
Csp6I GTAC 6 cut(s) 131, 481, 607, 791, 808, 943
CviAII CATG 8 cut(s) 101, 213, 248, 334, 472, 679, 709, 770
CviQI GTAC 6 cut(s) 131, 481, 607, 791, 808, 943
DdeI CTNAG 6 cut(s) 503, 531, 794, 859, 909, 982
DinI GGCGCC 1 cut(s) 645
DpnI GATC 2 cut(s) 31, 431
DpnII GATC 2 cut(s) 29, 429
EaeI YGGCCR 1 cut(s) 440
Eam1104I CTCTTC 1 cut(s) 765
EarI CTCTTC 1 cut(s) 765
Ecl136II GAGCTC 1 cut(s) 690
Eco130I CCWWGG 4 cut(s) 247, 417, 471, 538
Eco24I GRGCYC 1 cut(s) 692
Eco47I GGWCC 3 cut(s) 548, 658, 849
Eco53kI GAGCTC 1 cut(s) 690
Eco57I CTGAAG 2 cut(s) 668, 943
Eco88I CYCGRG 1 cut(s) 71
Eco91I GGTNACC 1 cut(s) 776
EcoICRI GAGCTC 1 cut(s) 690
EcoO109I RGGNCCY 1 cut(s) 548
EcoO65I GGTNACC 1 cut(s) 776
EcoRI GAATTC 1 cut(s) 252
EcoRII CCWGG 2 cut(s) 383, 620
EcoT14I CCWWGG 4 cut(s) 247, 417, 471, 538
EcoT38I GRGCYC 1 cut(s) 692
EgeI GGCGCC 1 cut(s) 645
EheI GGCGCC 1 cut(s) 645
ErhI CCWWGG 4 cut(s) 247, 417, 471, 538
FaeI CATG 8 cut(s) 104, 216, 251, 337, 475, 682, 712, 773
FaqI GGGAC 2 cut(s) 534, 734
FatI CATG 8 cut(s) 100, 212, 247, 333, 471, 678, 708, 769
Fnu4HI GCNGC 3 cut(s) 54, 647, 667
FriOI GRGCYC 1 cut(s) 692
Fsp4HI GCNGC 3 cut(s) 54, 647, 667
FspBI CTAG 4 cut(s) 539, 638, 867, 1031
GlaI GCGC 2 cut(s) 279, 645
GluI GCNGC 3 cut(s) 54, 647, 667
GsaI CCCAGC 1 cut(s) 459
GsuI CTGGAG 2 cut(s) 99, 406
HaeII RGCGCY 2 cut(s) 281, 647
HaeIII GGCC 2 cut(s) 442, 625
HapII CCGG 1 cut(s) 743
HhaI GCGC 2 cut(s) 280, 646
Hin1I GRCGYC 1 cut(s) 644
Hin1II CATG 8 cut(s) 104, 216, 251, 337, 475, 682, 712, 773
Hin6I GCGC 2 cut(s) 278, 644
HinP1I GCGC 2 cut(s) 278, 644
HincII GTYRAC 1 cut(s) 221
HindII GTYRAC 1 cut(s) 221
HindIII AAGCTT 1 cut(s) 373
HinfI GANTC 5 cut(s) 228, 314, 434, 855, 1019
HpaII CCGG 1 cut(s) 743
HphI GGTGA 3 cut(s) 404, 664, 788
Hpy166II GTNNAC 3 cut(s) 221, 349, 823
Hpy188I TCNGA 8 cut(s) 39, 169, 295, 319, 658, 687, 962, 972
Hpy188III TCNNGA 5 cut(s) 27, 116, 157, 743, 1016
Hpy8I GTNNAC 3 cut(s) 221, 349, 823
HpyAV CCTTC 3 cut(s) 154, 316, 995
HpyCH4III ACNGT 4 cut(s) 190, 615, 842, 878
HpyCH4V TGCA 5 cut(s) 53, 486, 586, 596, 823
HpyF10VI GCNNNNNNNGC 1 cut(s) 265
HpyF3I CTNAG 6 cut(s) 503, 531, 794, 859, 909, 982
Hsp92I GRCGYC 1 cut(s) 644
Hsp92II CATG 8 cut(s) 104, 216, 251, 337, 475, 682, 712, 773
HspAI GCGC 2 cut(s) 278, 644
KasI GGCGCC 1 cut(s) 643
Kpn2I TCCGGA 1 cut(s) 742
KpnI GGTACC 1 cut(s) 610
Kzo9I GATC 2 cut(s) 29, 429
LguI GCTCTTC 1 cut(s) 765
LmnI GCTCC 2 cut(s) 695, 913
Lsp1109I GCAGC 2 cut(s) 65, 653
MaeI CTAG 4 cut(s) 539, 638, 867, 1031
MaeIII GTNAC 2 cut(s) 514, 776
MalI GATC 2 cut(s) 31, 431
MboI GATC 2 cut(s) 29, 429
MboII GAAGA 8 cut(s) 58, 185, 188, 385, 752, 907, 913, 938
MhlI GDGCHC 3 cut(s) 620, 692, 825
MlsI TGGCCA 1 cut(s) 442
MluCI AATT 6 cut(s) 201, 237, 252, 424, 738, 885
MluNI TGGCCA 1 cut(s) 442
Mly113I GGCGCC 1 cut(s) 644
MlyI GAGTC 1 cut(s) 1013
MnlI CCTC 7 cut(s) 54, 354, 381, 407, 660, 781, 904
Mox20I TGGCCA 1 cut(s) 442
MroI TCCGGA 1 cut(s) 742
MscI TGGCCA 1 cut(s) 442
MseI TTAA 2 cut(s) 110, 560
MslI CAYNNNNRTG 2 cut(s) 677, 774
Msp20I TGGCCA 1 cut(s) 442
MspA1I CMGCKG 2 cut(s) 666, 695
MspI CCGG 1 cut(s) 743
MspR9I CCNGG 2 cut(s) 385, 622
Mva1269I GAATGC 1 cut(s) 588
MvaI CCWGG 2 cut(s) 385, 622
MwoI GCNNNNNNNGC 1 cut(s) 265
NarI GGCGCC 1 cut(s) 644
NcoI CCATGG 2 cut(s) 247, 471
NdeII GATC 2 cut(s) 29, 429
NheI GCTAGC 1 cut(s) 866
NlaIII CATG 8 cut(s) 104, 216, 251, 337, 475, 682, 712, 773
NlaIV GGNNCC 3 cut(s) 550, 608, 645
NmuCI GTSAC 1 cut(s) 776
NspI RCATGY 1 cut(s) 216
PciSI GCTCTTC 1 cut(s) 765
PctI GAATGC 1 cut(s) 588
PfeI GAWTC 4 cut(s) 228, 314, 434, 855
PflMI CCANNNNNTGG 1 cut(s) 880
PkrI GCNGC 3 cut(s) 55, 648, 668
PleI GAGTC 1 cut(s) 1013
PluTI GGCGCC 1 cut(s) 647
PpsI GAGTC 1 cut(s) 1013
PpuMI RGGWCCY 1 cut(s) 548
Psp124BI GAGCTC 1 cut(s) 692
Psp5II RGGWCCY 1 cut(s) 548
Psp6I CCWGG 2 cut(s) 383, 620
PspEI GGTNACC 1 cut(s) 776
PspFI CCCAGC 1 cut(s) 455
PspGI CCWGG 2 cut(s) 383, 620
PspN4I GGNNCC 3 cut(s) 550, 608, 645
PspPI GGNCC 3 cut(s) 548, 658, 849
PspPPI RGGWCCY 1 cut(s) 548
PstI CTGCAG 2 cut(s) 55, 488
PvuII CAGCTG 1 cut(s) 666
RsaI GTAC 6 cut(s) 132, 482, 608, 792, 809, 944
RsaNI GTAC 6 cut(s) 131, 481, 607, 791, 808, 943
RseI CAYNNNNRTG 2 cut(s) 677, 774
SacI GAGCTC 1 cut(s) 692
SapI GCTCTTC 1 cut(s) 765
SaqAI TTAA 2 cut(s) 110, 560
SatI GCNGC 3 cut(s) 54, 647, 667
Sau3AI GATC 2 cut(s) 29, 429
Sau96I GGNCC 3 cut(s) 548, 658, 849
ScaI AGTACT 1 cut(s) 482
SchI GAGTC 1 cut(s) 1013
ScrFI CCNGG 2 cut(s) 385, 622
SduI GDGCHC 3 cut(s) 620, 692, 825
SfcI CTRYAG 3 cut(s) 51, 460, 484
SfoI GGCGCC 1 cut(s) 645
SinI GGWCC 3 cut(s) 548, 658, 849
SmiMI CAYNNNNRTG 2 cut(s) 677, 774
SmlI CTYRAG 2 cut(s) 155, 749
SmoI CTYRAG 2 cut(s) 155, 749
Sse9I AATT 6 cut(s) 201, 237, 252, 424, 738, 885
SsiI CCGC 3 cut(s) 257, 647, 693
SspDI GGCGCC 1 cut(s) 643
SspMI CTAG 4 cut(s) 539, 638, 867, 1031
SstI GAGCTC 1 cut(s) 692
StyD4I CCNGG 2 cut(s) 383, 620
StyI CCWWGG 4 cut(s) 247, 417, 471, 538
TaaI ACNGT 4 cut(s) 190, 615, 842, 878
TaqI TCGA 4 cut(s) 26, 303, 432, 1017
TasI AATT 6 cut(s) 201, 237, 252, 424, 738, 885
TatI WGTACW 3 cut(s) 480, 807, 942
TauI GCSGC 1 cut(s) 649
TfiI GAWTC 4 cut(s) 228, 314, 434, 855
Tru1I TTAA 2 cut(s) 110, 560
Tru9I TTAA 2 cut(s) 110, 560
TscAI CASTG 5 cut(s) 193, 363, 535, 840, 847
TseFI GTSAC 1 cut(s) 776
TseI GCWGC 2 cut(s) 53, 666
Tsp45I GTSAC 1 cut(s) 776
TspDTI ATGAA 4 cut(s) 186, 322, 381, 914
TspGWI ACGGA 2 cut(s) 594, 738
TspRI CASTG 5 cut(s) 193, 363, 535, 840, 847
Van91I CCANNNNNTGG 1 cut(s) 880
VneI GTGCAC 1 cut(s) 821
VpaK11BI GGWCC 3 cut(s) 548, 658, 849
XapI RAATTY 1 cut(s) 252
XceI RCATGY 1 cut(s) 216
XmaJI CCTAGG 1 cut(s) 538
XspI CTAG 4 cut(s) 539, 638, 867, 1031
ZrmI AGTACT 1 cut(s) 482
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.